BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038466
(572 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 126/280 (45%), Gaps = 43/280 (15%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
A++N +I G+G VYK +L +G + A+K+L T+ F+ E +++S +
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAV 85
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF-CNLHNNEDAVELDWAKRVNIVKAMAHALA 421
HRN+++L GFC+ L+Y YM GS+ C E LDW KR I A LA
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 422 YLHHDCSPSIASTCPDSSNRTL---------------------------LAGTYGYIAPE 454
YLH C P I ++N L + G G+IAPE
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 455 LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLID-----VLDQRLP 509
T +EK DV+ +GV+ LE++ G+ D D +ML+D + +++L
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAFD---LARLANDDDVMLLDWVKGLLKEKKLE 262
Query: 510 PPVDRKV---IRDILLASTISFA--CLQSNPKSRPTMQYV 544
VD + +D + I A C QS+P RP M V
Sbjct: 263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 126/280 (45%), Gaps = 43/280 (15%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
A++N +I G+G VYK +L +G + A+K+L + F+ E +++S +
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAV 93
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF-CNLHNNEDAVELDWAKRVNIVKAMAHALA 421
HRN+++L GFC+ L+Y YM GS+ C E LDW KR I A LA
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 422 YLHHDCSPSIASTCPDSSNRTL---------------------------LAGTYGYIAPE 454
YLH C P I ++N L + GT G+IAPE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 455 LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLID-----VLDQRLP 509
T +EK DV+ +GV+ LE++ G+ D D +ML+D + +++L
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQRAFD---LARLANDDDVMLLDWVKGLLKEKKLE 270
Query: 510 PPVDRKV---IRDILLASTISFA--CLQSNPKSRPTMQYV 544
VD + +D + I A C QS+P RP M V
Sbjct: 271 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 294 YKKPKLE-ERATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFR 352
Y+ P ++ E ATNN D + + +G VYK L +G ALK+ T E+ +
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFE-- 83
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE-DAVELDWAKRVN 411
E + LS H ++V L GFC R M LIY+YM+ G+L +L+ ++ + + W +R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 412 IVKAMAHALAYLHH------------------------DCSPSIASTCPDSSN-RTLLAG 446
I A L YLH D S T D ++ ++ G
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
T GYI PE +TEK DVYSFGVV EVL +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 294 YKKPKLE-ERATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFR 352
Y+ P ++ E ATNN D + + +G VYK L +G ALK+ T E+ +
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFE-- 83
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE-DAVELDWAKRVN 411
E + LS H ++V L GFC R M LIY+YM+ G+L +L+ ++ + + W +R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 412 IVKAMAHALAYLH-----HDCSPSI--------------------ASTCPDSSNRTLLAG 446
I A L YLH H SI + + ++ G
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
T GYI PE +TEK DVYSFGVV EVL +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR 364
I+V + +G V KA+ K A+K++ SE+E AFI R LS+V H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQ----LSRVNHP 62
Query: 365 NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED------AVELDWAKRVNIVKAMAH 418
NIVKLYG CL+ C L+ EY + GSL+ LH E A + W + + A H
Sbjct: 63 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 419 AL---AYLHHDCSP---------------SIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
++ A +H D P + C ++ T G+ ++APE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 461 MTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI 520
+EKCDV+S+G++ EV+ + P D P ++ + PP+ + + + I
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 521 LLASTISFACLQSNPKSRPTMQYV 544
++ C +P RP+M+ +
Sbjct: 235 ---ESLMTRCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR 364
I+V + +G V KA+ K A+K++ SE+E AFI R LS+V H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQ----LSRVNHP 61
Query: 365 NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED------AVELDWAKRVNIVKAMAH 418
NIVKLYG CL+ C L+ EY + GSL+ LH E A + W + + A H
Sbjct: 62 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 419 AL---AYLHHDCSP---------------SIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
++ A +H D P + C ++ T G+ ++APE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 461 MTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI 520
+EKCDV+S+G++ EV+ + P D P ++ + PP+ + + + I
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 521 LLASTISFACLQSNPKSRPTMQYV 544
++ C +P RP+M+ +
Sbjct: 234 ---ESLMTRCWSKDPSQRPSMEEI 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 288 LLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKLHTSETEELA 346
L +K+K ++ K + A + ++ +G+VY A+ K + ALK L ++ E+
Sbjct: 17 LASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 76
Query: 347 FIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW 406
R E ++ S + H NI++LYG+ ++LI EY G+++ L + + D
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDE 133
Query: 407 AKRVNIVKAMAHALAY------LHHDCSPS-----------IA----STCPDSSNRTLLA 445
+ + +A+AL+Y +H D P IA S SS RT L
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 193
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT Y+ PE+ + EK D++S GV+ E L+GK P
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 288 LLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKLHTSETEELA 346
L +K+K ++ K + A + ++ +G+VY A+ K + ALK L ++ E+
Sbjct: 8 LASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 67
Query: 347 FIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW 406
R E ++ S + H NI++LYG+ ++LI EY G+++ L + + D
Sbjct: 68 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDE 124
Query: 407 AKRVNIVKAMAHALAY------LHHDCSPS-----------IA----STCPDSSNRTLLA 445
+ + +A+AL+Y +H D P IA S SS RT L
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 184
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT Y+ PE+ + EK D++S GV+ E L+GK P
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY RG ++ L + + D + + +A+AL+Y +H D P
Sbjct: 86 TRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 143 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 203 EFLVGKPP 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY RG ++ L + + D + + +A+AL+Y +H D P
Sbjct: 86 TRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 143 NLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 203 EFLVGKPP 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 288 LLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKLHTSETEELA 346
L +K+K ++ K + A + ++ +G+VY A+ K + ALK L ++ E+
Sbjct: 17 LASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG 76
Query: 347 FIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW 406
R E ++ S + H NI++LYG+ ++LI EY G+++ L + + D
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDE 133
Query: 407 AKRVNIVKAMAHALAY------LHHDCSPS-----------IA----STCPDSSNRTLLA 445
+ + +A+AL+Y +H D P IA S SS R L
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC 193
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT Y+ PE+ + EK D++S GV+ E L+GK P
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ N K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDS 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 82 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 138
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L+GT Y+ PE+ + EK D++S GV+
Sbjct: 139 NLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 199 EFLVGKPP 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 20 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 79
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 80 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 136
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 137 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 196
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 197 EFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 82
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 83 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 139
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 140 NLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 200 EFLVGKPP 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 25 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 84
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 85 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 141
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 142 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 201
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 202 EFLVGKPP 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 86 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 143 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 203 EFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 18 FGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 77
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 78 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 134
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 135 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 194
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 195 EFLVGKPP 202
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 82 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 138
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 139 NLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 199 EFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 86 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 143 NLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 203 EFLVGKPP 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 82
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 83 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 139
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 140 NLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 200 EFLVGKPP 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 81 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 137
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 82 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 138
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 139 NLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 199 EFLVGKPP 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 86 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 142
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE EK D++S GV+
Sbjct: 143 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCY 202
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 203 EFLVGKPP 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + + D + + +A+AL+Y +H D P
Sbjct: 84 TRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 140
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 141 NLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 476 EVLMGKHP 483
E L+GK P
Sbjct: 201 EFLVGKPP 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 84
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + D + + +A+AL+Y +H D P
Sbjct: 85 TRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPE 141
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS RT L GT Y+ PE+ + EK D++S GV+
Sbjct: 142 NLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 201
Query: 476 EVLMGKHP 483
E L+G P
Sbjct: 202 EFLVGMPP 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 307 IDVFSIWNYDG---YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
ID F I G +G+VY A+ + ALK L S+ E+ R E ++ + +
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 422
H NI++LY + R+ ++LI EY RG L+ L + + D + I++ +A AL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMY 138
Query: 423 ------LHHDCSPS-----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVM 461
+H D P IA S S R + GT Y+ PE+ +
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
EK D++ GV+ E+L+G P
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPP 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 49/284 (17%)
Query: 304 TNNIDVFSI------WNYDGYGSVYKAQLPNGKVFALKKLHTS---ETEELAFIKSFRNE 354
TNN D I G+G VYK + N V A+KKL TEEL + F E
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQE 80
Query: 355 AQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVK 414
+V+++ H N+V+L GF + L+Y YM GSL L + L W R I +
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 415 AMAHALAYLH--HDCSPSIAST-------------------CPDSSNRTLL----AGTYG 449
A+ + +LH H I S + +T++ GT
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDXXXXXXXXXDPKIMLID 502
Y+APE A +T K D+YSFGVV LE++ G + P+ D + + D
Sbjct: 201 YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIED 259
Query: 503 VLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
+D+++ D + + +++ CL RP ++ V Q
Sbjct: 260 YIDKKM-NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 49/284 (17%)
Query: 304 TNNIDVFSI------WNYDGYGSVYKAQLPNGKVFALKKLHTS---ETEELAFIKSFRNE 354
TNN D I G+G VYK + N V A+KKL TEEL + F E
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQE 80
Query: 355 AQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVK 414
+V+++ H N+V+L GF + L+Y YM GSL L + L W R I +
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 415 AMAHALAYLH--HDCSPSIAST-------------------CPDSSNRTLL----AGTYG 449
A+ + +LH H I S + +T++ GT
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDXXXXXXXXXDPKIMLID 502
Y+APE A +T K D+YSFGVV LE++ G + P+ D + + D
Sbjct: 201 YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIED 259
Query: 503 VLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
+D+++ D + + +++ CL RP ++ V Q
Sbjct: 260 YIDKKM-NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 318 YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VY A+ K + ALK L ++ E+ R E ++ S + H NI++LYG+
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 84
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
++LI EY G+++ L + D + + +A+AL+Y +H D P
Sbjct: 85 TRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPE 141
Query: 431 -----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA S SS R L GT Y+ PE+ + EK D++S GV+
Sbjct: 142 NLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 201
Query: 476 EVLMGKHP 483
E L+G P
Sbjct: 202 EFLVGMPP 209
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 118/284 (41%), Gaps = 49/284 (17%)
Query: 304 TNNIDVFSI------WNYDGYGSVYKAQLPNGKVFALKKLHTS---ETEELAFIKSFRNE 354
TNN D I G+G VYK + N V A+KKL TEEL + F E
Sbjct: 18 TNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQE 74
Query: 355 AQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVK 414
+V+++ H N+V+L GF + L+Y YM GSL L + L W R I +
Sbjct: 75 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 134
Query: 415 AMAHALAYLH--HDCSPSIAST----------------CPDSSNR-------TLLAGTYG 449
A+ + +LH H I S +S + + GT
Sbjct: 135 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDXXXXXXXXXDPKIMLID 502
Y+APE A +T K D+YSFGVV LE++ G + P+ D + + D
Sbjct: 195 YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIED 253
Query: 503 VLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
+D+++ D + + +++ CL RP ++ V Q
Sbjct: 254 YIDKKM-NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQ 293
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVLH 363
++ D+ +G+VY A+ K + ALK L S+ E+ R E ++ S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 364 RNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY- 422
NI+++Y + RK ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYC 130
Query: 423 -----LHHDCSPS-----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVMT 462
+H D P IA S S R + GT Y+ PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 463 EKCDVYSFGVVTLEVLMGKHPRD 485
EK D++ GV+ E L+G P D
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 307 IDVFSIWNYDG---YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
ID F I G +G+VY A+ K + ALK L S+ E+ R E ++ S +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 422
H NI+++Y + RK ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHY 130
Query: 423 ------LHHDCSPS-----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVM 461
+H D P IA S S R + GT Y+ PE+
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 462 TEKCDVYSFGVVTLEVLMGKHPRD 485
EK D++ GV+ E L+G P D
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 307 IDVFSIWNYDG---YGSVYKAQLPNGK-VFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
ID F I G +G+VY A+ K + ALK L S+ E+ R E ++ S +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 422
H NI+++Y + RK ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHY 129
Query: 423 ------LHHDCSPS-----------IA----STCPDSSNRTLLAGTYGYIAPELAYTMVM 461
+H D P IA S S R + GT Y+ PE+
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 462 TEKCDVYSFGVVTLEVLMGKHPRD 485
EK D++ GV+ E L+G P D
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 62/302 (20%)
Query: 289 LAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKL----HTSETE 343
+ ++ K +L A N I+ G+G V+K +L K V A+K L ETE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 344 ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE 403
+ + F+ E ++S + H NIVKLYG + M + E++ G L+ L + A
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHP 118
Query: 404 LDWAKRVNIVKAMAHALAYL--------HHDC-SPSI--------ASTCPDSSNRTL--- 443
+ W+ ++ ++ +A + Y+ H D SP+I A C ++ +L
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ 178
Query: 444 -------LAGTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXX 494
L G + ++APE A TEK D YSF ++ +L G+ P D
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG---- 234
Query: 495 DPKIMLIDVLDQR-----LP---PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
KI I+++ + +P PP R VI C +PK RP Y+ +
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVK 282
Query: 547 EF 548
E
Sbjct: 283 EL 284
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 127/302 (42%), Gaps = 62/302 (20%)
Query: 289 LAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKL----HTSETE 343
+ ++ K +L A N I+ G+G V+K +L K V A+K L ETE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 344 ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE 403
+ + F+ E ++S + H NIVKLYG + M + E++ G L+ L + A
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHP 118
Query: 404 LDWAKRVNIVKAMAHALAYL--------HHDC-SPSI--------ASTCPDSSNRTL--- 443
+ W+ ++ ++ +A + Y+ H D SP+I A C ++ L
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Query: 444 -------LAGTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXX 494
L G + ++APE A TEK D YSF ++ +L G+ P D
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG---- 234
Query: 495 DPKIMLIDVLDQR-----LP---PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
KI I+++ + +P PP R VI C +PK RP Y+ +
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVK 282
Query: 547 EF 548
E
Sbjct: 283 EL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 129/302 (42%), Gaps = 62/302 (20%)
Query: 289 LAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGK-VFALKKL----HTSETE 343
+ ++ K +L A N I+ G+G V+K +L K V A+K L ETE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 344 ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE 403
+ + F+ E ++S + H NIVKLYG + M + E++ G L+ L + A
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHP 118
Query: 404 LDWAKRVNIVKAMAHALAYL--------HHDC-SPSI--------ASTCPD-----SSNR 441
+ W+ ++ ++ +A + Y+ H D SP+I A C +S +
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ 178
Query: 442 TL-----LAGTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXX 494
++ L G + ++APE A TEK D YSF ++ +L G+ P D
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG---- 234
Query: 495 DPKIMLIDVLDQR-----LP---PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQ 546
KI I+++ + +P PP R VI C +PK RP Y+ +
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVK 282
Query: 547 EF 548
E
Sbjct: 283 EL 284
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 43/265 (16%)
Query: 317 GYGSVYKAQLPNGKVFALKKLHTS---ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 373
G+G VYK + N V A+KKL TEEL + F E +V ++ H N+V+L GF
Sbjct: 34 GFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQEIKVXAKCQHENLVELLGFS 90
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH--HDCSPSI 431
+ L+Y Y GSL L + L W R I + A+ + +LH H I
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDI 150
Query: 432 AST----------------CPDSSNR-------TLLAGTYGYIAPELAYTMVMTEKCDVY 468
S +S + + + GT Y APE A +T K D+Y
Sbjct: 151 KSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIY 209
Query: 469 SFGVVTLEVLMG-------KHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDIL 521
SFGVV LE++ G + P+ D + + D +D++ V
Sbjct: 210 SFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYS 269
Query: 522 LASTISFACLQSNPKSRPTMQYVSQ 546
+AS CL RP ++ V Q
Sbjct: 270 VASQ----CLHEKKNKRPDIKKVQQ 290
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 95 CNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTGSIPPEISALSKLQL 154
C+ AG++ E + G R QLN N +T + + G P +
Sbjct: 584 CHGAGNLLE------FQGI--RSEQLNRLSTRNPCNITSRVYG--GHTSPTFDNNGSMMF 633
Query: 155 LDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKI 214
LD+S N L+G IP EIG++ L LN+G N + G IP G+I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 215 PPEIAGMKNLTWLDLSNNNIKGSI----------PVRLSPNKGLCGGNFLDLPSCDTTK 263
P ++ + LT +DLSNNN+ G I P + N GLCG LP CD +
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG---YPLPRCDPSN 749
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 117 LSQLNFS--CFPNLVK--------LTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTI 166
LS NFS PNL + L +Q TG IPP +S S+L L LS N L+GTI
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 167 PPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTW 226
P +G+L L +L + N L G IP G+IP ++ NL W
Sbjct: 432 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 491
Query: 227 LDLSNNNIKGSIP 239
+ LSNN + G IP
Sbjct: 492 ISLSNNRLTGEIP 504
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
L L + F LTG IP +S + L + LS+N LTG IP IG L+NL L + +NS
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF- 523
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLSPNKG 247
G IP E+ ++L WLDL+ N G+IP + G
Sbjct: 524 -----------------------SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 560
Query: 248 LCGGNFL 254
NF+
Sbjct: 561 KIAANFI 567
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 128 LVKLTIQFFALTGSIPPEISALSK--LQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNS 185
L+ L + +G I P + K LQ L L +NG TG IPP + N L+ L++ N
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 186 LIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLS 243
L G IPS+ G+IP E+ +K L L L N++ G IP LS
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 484
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 127 NLVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSL 186
NL +++ LTG IP I L L +L LS+N +G IP E+G+ ++LI L++ +N
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 547
Query: 187 IGPIPSA 193
G IP+A
Sbjct: 548 NGTIPAA 554
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 144 PEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXX 203
P + S LQ LD+S N L+G I L LN+ SN +GPIP
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYL 271
Query: 204 XXXXXXXXGKIPPEIAGM-KNLTWLDLSNNNIKGSIP 239
G+IP ++G LT LDLS N+ G++P
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 138 LTGSIPPE-ISALSKLQLLDLSSNGLTGTIPPEIGNLK-NLIELNVGSNSLIGPI-PS-A 193
+G +P + + + L++LDLS N +G +P + NL +L+ L++ SN+ GPI P+
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 194 XXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRL 242
GKIPP ++ L L LS N + G+IP L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
L L I ++G + ++S L+ LD+SSN + I P +G+ L L++ N L
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLS 233
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLS 243
G A G IPP +K+L +L L+ N G IP LS
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLS 287
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 132 TIQFFAL-----TGSIPPEIS-ALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNS 185
++Q+ +L TG IP +S A L LDLS N G +PP G+ L L + SN+
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 326
Query: 186 LIGPIP-SAXXXXXXXXXXXXXXXXXXGKIPPEIAGMK-NLTWLDLSNNNIKGSI 238
G +P G++P + + +L LDLS+NN G I
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 95 CNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTGSIPPEISALSKLQL 154
C+ AG++ E + G R QLN N +T + + G P +
Sbjct: 587 CHGAGNLLE------FQGI--RSEQLNRLSTRNPCNITSRVYG--GHTSPTFDNNGSMMF 636
Query: 155 LDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKI 214
LD+S N L+G IP EIG++ L LN+G N + G IP G+I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 215 PPEIAGMKNLTWLDLSNNNIKGSI----------PVRLSPNKGLCGGNFLDLPSCDTTK 263
P ++ + LT +DLSNNN+ G I P + N GLCG LP CD +
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG---YPLPRCDPSN 752
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
L +L +Q TG IPP +S S+L L LS N L+GTIP +G+L L +L + N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIP 239
G IP G+IP ++ NL W+ LSNN + G IP
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
L L + F LTG IP +S + L + LS+N LTG IP IG L+NL L + +NS
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF- 526
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLSPNKG 247
G IP E+ ++L WLDL+ N G+IP + G
Sbjct: 527 -----------------------SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 563
Query: 248 LCGGNFL 254
NF+
Sbjct: 564 KIAANFI 570
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 128 LVKLTIQFFALTGSIPPEISALSK--LQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNS 185
L+ L + +G I P + K LQ L L +NG TG IPP + N L+ L++ N
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 186 LIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLS 243
L G IPS+ G+IP E+ +K L L L N++ G IP LS
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 127 NLVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSL 186
NL +++ LTG IP I L L +L LS+N +G IP E+G+ ++LI L++ +N
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550
Query: 187 IGPIPSA 193
G IP+A
Sbjct: 551 NGTIPAA 557
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 144 PEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXX 203
P + S LQ LD+S N L+G I L LN+ SN +GPIP
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYL 274
Query: 204 XXXXXXXXGKIPPEIAGM-KNLTWLDLSNNNIKGSIP 239
G+IP ++G LT LDLS N+ G++P
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 138 LTGSIPPE-ISALSKLQLLDLSSNGLTGTIPPEIGNLK-NLIELNVGSNSLIGPI-PS-A 193
+G +P + + + L++LDLS N +G +P + NL +L+ L++ SN+ GPI P+
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 194 XXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRL 242
GKIPP ++ L L LS N + G+IP L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
L L I ++G + ++S L+ LD+SSN + I P +G+ L L++ N L
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLS 236
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLS 243
G A G IPP +K+L +L L+ N G IP LS
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLS 290
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 132 TIQFFAL-----TGSIPPEIS-ALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNS 185
++Q+ +L TG IP +S A L LDLS N G +PP G+ L L + SN+
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 186 LIGPIP-SAXXXXXXXXXXXXXXXXXXGKIPPEIAGMK-NLTWLDLSNNNIKGSI 238
G +P G++P + + +L LDLS+NN G I
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G+V++A+ +G A+K L + + F E ++ ++ H NIV G
Sbjct: 50 FGTVHRAEW-HGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI------ 431
+ ++ EY+ RGSL+ LH + +LD +R+++ +A + YLH+ P +
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKS 167
Query: 432 ----------ASTCPDSSNR----TLL-----AGTYGYIAPELAYTMVMTEKCDVYSFGV 472
C +R T L AGT ++APE+ EK DVYSFGV
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 473 VTLEVLMGKHP 483
+ E+ + P
Sbjct: 228 ILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 27/191 (14%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G+V++A+ +G A+K L + + F E ++ ++ H NIV G
Sbjct: 50 FGTVHRAEW-HGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI------ 431
+ ++ EY+ RGSL+ LH + +LD +R+++ +A + YLH+ P +
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKS 167
Query: 432 ----------ASTCPDSSNR---------TLLAGTYGYIAPELAYTMVMTEKCDVYSFGV 472
C +R AGT ++APE+ EK DVYSFGV
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 473 VTLEVLMGKHP 483
+ E+ + P
Sbjct: 228 ILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 36/199 (18%)
Query: 317 GYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
G+G VY+A +V H + + I++ R EA++ + + H NI+ L G CL
Sbjct: 19 GFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE 78
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIASTCP 436
+ L+ E+ + G L L ++ VN +A + YLH + I
Sbjct: 79 PNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIVPIIHRDL 134
Query: 437 DSSNRTLL--------------------------------AGTYGYIAPELAYTMVMTEK 464
SSN +L AG Y ++APE+ + ++
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 465 CDVYSFGVVTLEVLMGKHP 483
DV+S+GV+ E+L G+ P
Sbjct: 195 SDVWSYGVLLWELLTGEVP 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 88/216 (40%), Gaps = 47/216 (21%)
Query: 69 KKALINTGWWNSSFWTTDHCK--WEGITCNSAGSIFE---LYLSG--------------- 108
KK L N +S TTD C W G+ C++ + L LSG
Sbjct: 15 KKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLAN 74
Query: 109 -------YYAGFN----------WRLSQLNFSCFPNLVKLTIQFFALTGSIPPEISALSK 151
Y G N +L+QL++ L I ++G+IP +S +
Sbjct: 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHY--------LYITHTNVSGAIPDFLSQIKT 126
Query: 152 LQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIP-SAXXXXXXXXXXXXXXXXX 210
L LD S N L+GT+PP I +L NL+ + N + G IP S
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 211 XGKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLSPNK 246
GKIPP A + NL ++DLS N ++G V +K
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDK 221
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLI 187
+TI LTG IPP + L+ L +DLS N L G G+ KN ++++ NSL
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL- 233
Query: 188 GPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAGM-KNLTWLDLSNNNIKGSIPVRLS 243
GK+ G+ KNL LDL NN I G++P L+
Sbjct: 234 --------------------AFDLGKV-----GLSKNLNGLDLRNNRIYGTLPQGLT 265
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 148 ALSK-LQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSA 193
LSK L LDL +N + GT+P + LK L LNV N+L G IP
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 212 GKIPPEIAGMKNLTWLDLSNNNIKGSIPVRLSPNKGLCGGNF 253
G IPP IA + L +L +++ N+ G+IP LS K L +F
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 310 FSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN 365
F I G GS + L NG+ +A+K L L ++ +E +LS V H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 366 IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAY 422
I++++G + +F+I +Y++ G LF L ++ + V +A V + H+
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 423 LHHDCSPS----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCD 466
++ D P A PD + L GT YIAPE+ T + D
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--YXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 467 VYSFGVVTLEVLMGKHP 483
+SFG++ E+L G P
Sbjct: 186 WWSFGILIYEMLAGYTP 202
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED-AVEL--- 404
+SF EAQ++ ++ H +V+LY + + ++++ EYM +GSL L + E A++L
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL 107
Query: 405 -DWAKRVNIVKAMAHALAYLHHDCSPS----------------IASTCPDSSNRTLLAGT 447
D A +V A + Y+H D + +A D+
Sbjct: 108 VDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAK 167
Query: 448 Y--GYIAPELAYTMVMTEKCDVYSFGVVTLE-VLMGKHPRDXXXXXXXXXDPKIMLIDVL 504
+ + APE A T K DV+SFG++ E V G+ P P + +VL
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY-----------PGMNNREVL 216
Query: 505 DQ-----RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
+Q R+P P D + L+ C + +P+ RPT +Y+ Q FL
Sbjct: 217 EQVERGYRMPCPQDCPISLHELM-----IHCWKKDPEERPTFEYL-QSFL 260
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 42/187 (22%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+V +K+L + E ++F E +V+ + H N++K G K + I EY+K
Sbjct: 35 GEVMVMKELIRFDEETQ---RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH-----------HDC---------- 427
G+L + + + + W++RV+ K +A +AYLH H+C
Sbjct: 92 GTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVV 149
Query: 428 --------------SPSIASTC--PDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
P + PD R + G ++APE+ EK DV+SFG
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209
Query: 472 VVTLEVL 478
+V E++
Sbjct: 210 IVLCEII 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 280 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 334
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 335 PIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 393
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 453
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 454 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 498
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + P+ RPT +Y+ Q FL
Sbjct: 499 --QCWRKEPEERPTFEYL-QAFL 518
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 251
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 252 PIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 371 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 415
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + P+ RPT +Y+ Q FL
Sbjct: 416 --QCWRKEPEERPTFEYL-QAFL 435
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQ 115
Query: 409 RVNIVKAMAHALAYL------HHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +AY+ H D + + +A D+
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 224
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + +P+ RPT +Y+ Q FL
Sbjct: 225 LDQVERGYRMPCPPECPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQ 115
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 224
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + +P+ RPT +Y+ Q FL
Sbjct: 225 LDQVERGYRMPCPPECPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQ 281
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 390
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + P+ RPT +Y+ Q FL
Sbjct: 391 LDQVERGYRMPCPPECPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 435
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 39/178 (21%)
Query: 345 LAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAV 402
LA K F+ EA++L+ + H +IVK YG C + +++EYMK G L F H + +
Sbjct: 58 LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117
Query: 403 -----------ELDWAKRVNIVKAMAHALAYL--HHDCSPSIAS-TCPDSSNRTLLAGTY 448
EL ++ ++I +A + YL H +A+ C +N + G +
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF 177
Query: 449 G----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
G ++ PE T + DV+SFGV+ E+ GK P
Sbjct: 178 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 251
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 252 PIYIVGEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 371 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 415
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + P+ RPT +Y+ Q FL
Sbjct: 416 --QCWRKEPEERPTFEYL-QAFL 435
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 86 PIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 205 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 249
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 250 --QCWRKDPEERPTFEYL-QAFL 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQ 108
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 109 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 168
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 169 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 217
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + P+ RPT +Y+ Q FL
Sbjct: 218 LDQVERGYRMPCPPECPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 22 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 76
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 77 PIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 135
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 136 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 195
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 196 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 240
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 241 --QCWRKDPEERPTFEYL-QAFL 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 20 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 74
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 75 PIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 133
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 134 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 193
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 194 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 238
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 239 --QCWRKDPEERPTFEYL-QAFL 258
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQ 115
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 224
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + +P+ RPT +Y+ Q FL
Sbjct: 225 LDQVERGYRMPCPPECPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQ 115
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 224
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + +P+ RPT +Y+ Q FL
Sbjct: 225 LDQVERGYRMPCPPECPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAV---- 402
K F EA++L+ + H +IVK YG C+ + +++EYMK G L F H DAV
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH-GPDAVLMAE 118
Query: 403 -----ELDWAKRVNIVKAMAHALAYL--HHDCSPSIAS-TCPDSSNRTLLAGTYG----- 449
EL ++ ++I + +A + YL H +A+ C N + G +G
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
Query: 450 -----------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
++ PE T + DV+S GVV E+ GK P
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 51/232 (21%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++F EAQV+ ++ H +V+LY + + ++++ EYM +GSL + E L +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLL-DFLKGETGKYLRLPQ 112
Query: 409 RVNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAG 446
V++ +A +A Y+H D + +A D+
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 172
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE A T K DV+SFG++ E+ G+ P P ++ +V
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREV 221
Query: 504 LDQ-----RLP-PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFL 549
LDQ R+P PP + + D++ C + P+ RPT +Y+ Q FL
Sbjct: 222 LDQVERGYRMPCPPECPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 266
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 82
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 83 PIYIVTEYMNKGSLL-DFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAAN 141
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 202 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 246
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + P+ RPT +Y+ Q FL
Sbjct: 247 --QCWRKEPEERPTFEYL-QAFL 266
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 198 FGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 252
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 253 PIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 311
Query: 431 -------IASTCPDSSNRTLLAGTY----------GYIAPELAYTMVMTEKCDVYSFGVV 473
+ R + Y + APE A T K DV+SFG++
Sbjct: 312 ILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 371
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 372 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 416
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 417 --QCWRKDPEERPTFEYL-QAFL 436
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
++++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 86 PIYIVCEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 205 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 249
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 250 --QCWRKDPEERPTFEYL-QAFL 269
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 21 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 75
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+ ++ EYM +GSL + E L + V++ +A +A Y+H D +
Sbjct: 76 PIXIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 134
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 195 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 239
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + P+ RPT +Y+ Q FL
Sbjct: 240 --QCWRKEPEERPTFEYL-QAFL 259
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+ A+K + + ++ +S E Q+L Q+ H NI+KLY F + +L+ E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS---IASTCPDSS 439
G LF + + + E+D A+ I++ + + Y+ H D P + S D++
Sbjct: 117 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 173
Query: 440 NRTL----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
R + GT YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 174 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+ A+K + + ++ +S E Q+L Q+ H NI+KLY F + +L+ E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS---IASTCPDSS 439
G LF + + + E+D A+ I++ + + Y+ H D P + S D++
Sbjct: 111 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 167
Query: 440 NRTL----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
R + GT YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 168 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+ A+K + + ++ +S E Q+L Q+ H NI+KLY F + +L+ E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS---IASTCPDSS 439
G LF + + + E+D A+ I++ + + Y+ H D P + S D++
Sbjct: 134 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 190
Query: 440 NRTL----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
R + GT YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 191 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+ A+K + + ++ +S E Q+L Q+ H NI+KLY F + +L+ E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS---IASTCPDSS 439
G LF + + + E+D A+ I++ + + Y+ H D P + S D++
Sbjct: 135 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 191
Query: 440 NRTL----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
R + GT YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 192 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 85
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 141
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 142 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 250
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 251 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 288
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS- 430
++++ EYM +G L + E L + V++ +A +AY+ H D +
Sbjct: 86 PIYIVMEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 205 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 249
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 250 --QCWRKDPEERPTFEYL-QAFL 269
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 68
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 124
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTM--- 459
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 125 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 460 ---------------VMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 233
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 234 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 317 GYGSVYKAQ--LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL 374
G +VY A+ + N KV A+K + E+ +K F E SQ+ H+NIV +
Sbjct: 23 GMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE 81
Query: 375 HRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAM------AHALAYLHHDCS 428
C +L+ EY++ G + + +D A +N + AH + +H D
Sbjct: 82 EDDCYYLVMEYIE-GPTLSEYIESHGPLSVDTA--INFTNQILDGIKHAHDMRIVHRDIK 138
Query: 429 P--------------------SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVY 468
P +++ T +N L GT Y +PE A E D+Y
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL--GTVQYFSPEQAKGEATDECTDIY 196
Query: 469 SFGVVTLEVLMGKHP 483
S G+V E+L+G+ P
Sbjct: 197 SIGIVLYEMLVGEPP 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 55/263 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF++ EAQV+ ++ H +V+LY + +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA-VVSEE 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS- 430
++++ EYM +G L + E L + V++ +A +AY+ H D +
Sbjct: 86 PIYIVTEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE A T K DV+SFG++
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 474 TLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQ-----RLP-PPVDRKVIRDILLASTI 526
E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 205 LTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLMC---- 249
Query: 527 SFACLQSNPKSRPTMQYVSQEFL 549
C + +P+ RPT +Y+ Q FL
Sbjct: 250 --QCWRKDPEERPTFEYL-QAFL 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G+ A+K + + ++ +S E Q+L Q+ H NI KLY F + +L+ E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 389 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS---IASTCPDSS 439
G LF + + + E+D A+ I++ + + Y +H D P + S D++
Sbjct: 111 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDAN 167
Query: 440 NRTL----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
R + GT YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 168 IRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGFVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGY-----IAPELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE---- 403
+++F EA V+ + H +VKL+ + ++ +++I E+M +GSL L ++E + +
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 279
Query: 404 -LDWAKRVNIVKAMAHALAYLHHD-------CSPSIASTCPDSS-NRTLLAGTYGYIAPE 454
+D++ ++ A Y+H D S S+ D R + APE
Sbjct: 280 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPE 339
Query: 455 LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVD 513
T K DV+SFG++ +E++ G+ P +P+++ R+P P +
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALERGYRMPRPEN 393
Query: 514 -RKVIRDILLASTISFACLQSNPKSRPTMQYVS 545
+ + +I++ C ++ P+ RPT +Y+
Sbjct: 394 CPEELYNIMM------RCWKNRPEERPTFEYIQ 420
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 95
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ EYM+ GSL F H+ + V + V ++
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGML 151
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 152 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 260
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 261 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 298
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 56/264 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 24 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 137
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 196
Query: 471 GVVTLEVL---MGKHPRDXXXXXXXXXDP-KIMLIDVLDQRLPPPVD--RKVIRDILLAS 524
GV+ E+ M +P DP ++ + D R+ P KV
Sbjct: 197 GVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYRMERPEGCPEKVYE------ 241
Query: 525 TISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 242 -LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 81/201 (40%), Gaps = 42/201 (20%)
Query: 318 YGSVYKAQLP--NGKV---FALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
+G VYK L +GK A+K L TE+ F EA ++ Q H NI++L G
Sbjct: 57 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNIIRLEGV 114
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHD 426
K M +I EYM+ G+L L + E + V +++ +A + YL H D
Sbjct: 115 ISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNYVHRD 172
Query: 427 CSPSIASTCPDSSNRTLLAGTYG-----------------------YIAPELAYTMVMTE 463
+ A +SN +G + APE T
Sbjct: 173 LA---ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 464 KCDVYSFGVVTLEVLM-GKHP 483
DV+SFG+V EV+ G+ P
Sbjct: 230 ASDVWSFGIVMWEVMTYGERP 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 56/264 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 24 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 137
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 196
Query: 471 GVVTLEVL---MGKHPRDXXXXXXXXXDP-KIMLIDVLDQRLPPPVD--RKVIRDILLAS 524
GV+ E+ M +P DP ++ + D R+ P KV
Sbjct: 197 GVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYRMERPEGCPEKVYE------ 241
Query: 525 TISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 242 -LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 48/224 (21%)
Query: 297 PKLEERATNNIDVFSIWNYDGYGSVYKA----QLPNGKVFALKKLHTSETEELAFIKSFR 352
P +E N D F I G GS K + K++A+K ++ + E +++
Sbjct: 4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNN----EDAVELDWAK 408
E Q++ + H +V L+ + MF++ + + G L +L N E+ V+L
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL---- 119
Query: 409 RVNIVKAMAHALAYL------HHDCSP----------------SIASTCPDSSNRTLLAG 446
+ + AL YL H D P +IA+ P + T +AG
Sbjct: 120 ---FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAG 176
Query: 447 TYGYIAPEL-------AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T Y+APE+ Y+ + D +S GV E+L G+ P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRP 216
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 27 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 84 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 140
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 199
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 200 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 244
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 245 ---LMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 31 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 144
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 203
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 204 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 248
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 249 ---LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 27 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 84 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 140
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 199
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 200 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 244
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 245 ---LMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 31 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 144
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 203
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 204 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 248
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 249 ---LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 31 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 144
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 203
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 204 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 248
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 249 ---LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 31 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 144
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 203
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 204 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 248
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 249 ---LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 28 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 141
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 200
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 201 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 245
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 246 ---LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 30 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 86
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 87 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 143
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 144 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 202
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 203 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 247
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 248 ---LMRACWQWNPSDRPSFAEIHQAF 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 31 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 144
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 203
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 204 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 248
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 249 ---LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 26 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 139
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 198
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 199 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 243
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 244 ---LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 28 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 141
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 200
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 201 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 245
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 246 ---LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 109
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 110 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 166
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 167 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K L + TE+ + F +EA ++ Q H N++ L G + +I E+M+ GSL
Sbjct: 65 AIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHD-------------CSPSIAS 433
L N+ + + V +++ +A + YL H D C S
Sbjct: 123 SFLRQNDGQFTV--IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 434 TC----PDSSNRTLLAGTYGYI-----APELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
D+S+ T + G I APE T DV+S+G+V EV+ G+ P
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
Query: 484 RDXXXXXXXXXDPKIMLIDVLDQRLPPPVD-RKVIRDILLASTISFACLQSNPKSRP 539
+ ++ D RLPPP+D + ++L C Q + RP
Sbjct: 241 ------YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML------DCWQKDRNHRP 285
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE---- 403
+++F EA V+ + H +VKL+ + ++ +++I E+M +GSL L ++E + +
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 112
Query: 404 -LDWAKRVNIVKAMAHALAYLHHDCSPS----------------IASTCPDSSNRTLLAG 446
+D++ ++ A Y+H D + +A D+
Sbjct: 113 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 172
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE T K DV+SFG++ +E++ G+ P +P+++
Sbjct: 173 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALE 226
Query: 504 LDQRLPPPVD-RKVIRDILLASTISFACLQSNPKSRPTMQYVS 545
R+P P + + + +I++ C ++ P+ RPT +Y+
Sbjct: 227 RGYRMPRPENCPEELYNIMM------RCWKNRPEERPTFEYIQ 263
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 108/288 (37%), Gaps = 65/288 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 39 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 95
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 96 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 152
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 153 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 211
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 212 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 256
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDISISEL 570
+ AC Q NP RP+ + Q F + + ++I D EL
Sbjct: 257 ---LMRACWQWNPSDRPSFAEIHQAF-----ETMFQESSISDEVEKEL 296
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 107
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 108 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 164
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 165 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRN-------------EAQVLSQVLHRNIVKL-YGFCL 374
GKVF +KK+ S+ +L +K + E +L +V H IVKL Y F
Sbjct: 38 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 97
Query: 375 HRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAMAHALAYLHHDCSPS- 430
K ++LI ++++ G LF L E D + + + H+L ++ D P
Sbjct: 98 EGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN 156
Query: 431 ---------------IASTCPDSSNRTL-LAGTYGYIAPELAYTMVMTEKCDVYSFGVVT 474
++ D + GT Y+APE+ T+ D +SFGV+
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 475 LEVLMGKHP 483
E+L G P
Sbjct: 217 FEMLTGTLP 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 230 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 286
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 287 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 96/195 (49%), Gaps = 36/195 (18%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 25 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 79
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH +E E+ K ++I + A + YLH
Sbjct: 80 PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKSIIHRDLKSN 137
Query: 425 ----HDCS---------PSIASTCPDSSNRTLLAGTYGYIAPE---LAYTMVMTEKCDVY 468
H+ + ++ S S L+G+ ++APE + + + + DVY
Sbjct: 138 NIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 197
Query: 469 SFGVVTLEVLMGKHP 483
+FG+V E++ G+ P
Sbjct: 198 AFGIVLYELMTGQLP 212
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRN-------------EAQVLSQVLHRNIVKL-YGFCL 374
GKVF +KK+ S+ +L +K + E +L +V H IVKL Y F
Sbjct: 38 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 97
Query: 375 HRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAMAHALAYLHHDCSPS- 430
K ++LI ++++ G LF L E D + + + H+L ++ D P
Sbjct: 98 EGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN 156
Query: 431 ---------------IASTCPDSSNRTL-LAGTYGYIAPELAYTMVMTEKCDVYSFGVVT 474
++ D + GT Y+APE+ T+ D +SFGV+
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 475 LEVLMGKHP 483
E+L G P
Sbjct: 217 FEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRN-------------EAQVLSQVLHRNIVKL-YGFCL 374
GKVF +KK+ S+ +L +K + E +L +V H IVKL Y F
Sbjct: 39 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 98
Query: 375 HRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAMAHALAYLHHDCSPS- 430
K ++LI ++++ G LF L E D + + + H+L ++ D P
Sbjct: 99 EGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN 157
Query: 431 ---------------IASTCPDSSNRTL-LAGTYGYIAPELAYTMVMTEKCDVYSFGVVT 474
++ D + GT Y+APE+ T+ D +SFGV+
Sbjct: 158 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 475 LEVLMGKHP 483
E+L G P
Sbjct: 218 FEMLTGTLP 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 28 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 141
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 200
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 201 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 245
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 246 ---LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 99 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 155
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 156 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 153 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 209
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 210 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE---- 403
+++F EA V+ + H +VKL+ + ++ +++I E+M +GSL L ++E + +
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 285
Query: 404 -LDWAKRVNIVKAMAHALAYLHHDCSPS----------------IASTCPDSSNRTLLAG 446
+D++ ++ A Y+H D + +A D+
Sbjct: 286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345
Query: 447 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDV 503
+ + APE T K DV+SFG++ +E++ G+ P +P+++
Sbjct: 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALE 399
Query: 504 LDQRLPPPVD-RKVIRDILLASTISFACLQSNPKSRPTMQYVS 545
R+P P + + + +I++ C ++ P+ RPT +Y+
Sbjct: 400 RGYRMPRPENCPEELYNIMM------RCWKNRPEERPTFEYIQ 436
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 102/264 (38%), Gaps = 56/264 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 24 FGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H D + A
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 137
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 196
Query: 471 GVVTLEVL---MGKHPRDXXXXXXXXXDP-KIMLIDVLDQRLPPPVD--RKVIRDILLAS 524
GV+ E+ M +P DP ++ + D R+ P KV
Sbjct: 197 GVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYRMERPEGCPEKVYE------ 241
Query: 525 TISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 242 -LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+GK+ A+KK L + EL F NE ++ H N+V++Y L ++++ E+
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 102
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDC-SPSI-------- 431
++ G+L + NE+ + A + +++A++ HA +H D S SI
Sbjct: 103 LEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 159
Query: 432 --------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
A + R L GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 160 KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 68
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ E M+ GSL F H+ + V + V ++
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGML 124
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTM--- 459
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 125 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 460 ---------------VMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 233
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 234 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 271
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 306 NIDVFSIWNYDGYGSVYKAQLPNG-KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR 364
+ ++ + +G V +L N KVFA+K L+ E + A FR E VL +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 365 NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----RVNIVKAMAHAL 420
I L+ ++L+ +Y G L L ED + + A+ + I H L
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 421 AYLHHDCSP-----------------SIASTCPDSSNRTLLA-GTYGYIAPELAYTMVMT 462
Y+H D P S D + ++ +A GT YI+PE+ M
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 463 E-----KCDVYSFGVVTLEVLMGKHP 483
+ +CD +S GV E+L G+ P
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ E M+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGAVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 20 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 75
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L++E+M+ G L L A E +++ + MA+ + +H D + A
Sbjct: 76 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA---AR 132
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 473 VTLEVL-MGKHPRD 485
+ EV GK P +
Sbjct: 193 LMWEVFSEGKIPYE 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE----LD 405
F EAQ + ++ H +VK YG C ++++ EY+ G L L ++ +E L+
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE 108
Query: 406 WAKRVNIVKAMAHALAYLHHDCSPS----IASTCPDSSN----RTLLAGTY--------- 448
V A + ++H D + C S+ R +L Y
Sbjct: 109 MCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168
Query: 449 -GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLDQ 506
+ APE+ + + K DV++FG++ EV +GK P D + +++L
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD------LYTNSEVVLKVSQGH 222
Query: 507 RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
RL P + D + I ++C P+ RPT Q
Sbjct: 223 RLYRP---HLASDTIY--QIMYSCWHELPEKRPTFQ 253
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 233 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H + + A
Sbjct: 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA---A 346
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 347 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 405
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 406 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 450
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 451 ---LMRACWQWNPSDRPSFAEIHQAF 473
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 36/195 (18%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 37 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 91
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH +E E+ K ++I + A + YLH
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 425 -----HDCSPSIA--------STCPDSSNRTLLAGTYGYIAPE---LAYTMVMTEKCDVY 468
D + I S S L+G+ ++APE + + + + DVY
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 469 SFGVVTLEVLMGKHP 483
+FG+V E++ G+ P
Sbjct: 210 AFGIVLYELMTGQLP 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 60/283 (21%)
Query: 300 EERATNNIDVFSIWNYDGYGSV--YKAQLPNGKVF--ALKKLHTSETEELAFIKSFRNEA 355
+E NI + + +G V + +LP+ K A+K L TE+ + F EA
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEA 97
Query: 356 QVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIV 413
++ Q H NI++L G K + ++ E M+ GSL F H+ + V + V ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGML 153
Query: 414 KAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYGYIA-----PELAYTMV-- 460
+ +A + YL H D + A +SN +G PE AYT
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 461 ----------------MTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDV 503
T DV+S+G+V EV+ G+ P +I
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKA 262
Query: 504 LDQ--RLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYV 544
+D+ RLPPP+D L+ C Q + +RP + +
Sbjct: 263 VDEGYRLPPPMDCPAALYQLM-----LDCWQKDRNNRPKFEQI 300
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 97/254 (38%), Gaps = 52/254 (20%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 23 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 78
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L++E+M+ G L L A E +++ + MA+ +H D + A
Sbjct: 79 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA---AR 135
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 195
Query: 473 VTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFA-- 529
+ EV GK P + D RL P LAST +
Sbjct: 196 LMWEVFSEGKIPYENRSNSEVVEDISTGF------RLYKP---------RLASTHVYQIM 240
Query: 530 --CLQSNPKSRPTM 541
C + P+ RP
Sbjct: 241 NHCWRERPEDRPAF 254
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 230 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 286
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H + + A
Sbjct: 287 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLA---A 343
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 344 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 402
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 403 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 447
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 448 ---LMRACWQWNPSDRPSFAEIHQAF 470
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 26 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 138
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 195
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 21 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 75
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 133
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 190
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 23 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 77
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 78 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 135
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 192
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 18 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 73
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L++E+M+ G L L A E +++ + MA+ +H D + A
Sbjct: 74 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA---AR 130
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 190
Query: 473 VTLEVL-MGKHPRD 485
+ EV GK P +
Sbjct: 191 LMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 20 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 75
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L++E+M+ G L L A E +++ + MA+ +H D + A
Sbjct: 76 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA---AR 132
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 473 VTLEVL-MGKHPRD 485
+ EV GK P +
Sbjct: 193 LMWEVFSEGKIPYE 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 26 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 80
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 138
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 195
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 21 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 75
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 133
Query: 425 -----HDCSPSIA--------STCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + I S S L+G+ ++APE+ + M +K
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 190
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 43/184 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL- 391
A+K L TE + F +EA ++ Q H NI++L G + ++ EYM+ GSL
Sbjct: 81 AIKALKAGYTERQR--RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 392 -FCNLHNNEDAVELDWAKRVNIVKAMAHA------LAYLHHD-------------CSPS- 430
F H+ + + + V +++ + L Y+H D C S
Sbjct: 139 TFLRTHDGQFTI----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 431 -----IASTCPDSSNRTLLAGTYGYI-----APELAYTMVMTEKCDVYSFGVVTLEVLM- 479
+ PD++ T T G I APE + DV+SFGVV EVL
Sbjct: 195 FGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 480 GKHP 483
G+ P
Sbjct: 251 GERP 254
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 60/266 (22%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY+ K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 272 YGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 328
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
++I E+M G+L CN V L A +++ ++H + + A
Sbjct: 329 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLA---A 385
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 386 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAF 444
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVL-----DQRLPPPVD--RKVIRDILL 522
GV+ E+ G P P I L V D R+ P KV
Sbjct: 445 GVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDYRMERPEGCPEKVYE---- 489
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEF 548
+ AC Q NP RP+ + Q F
Sbjct: 490 ---LMRACWQWNPSDRPSFAEIHQAF 512
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 347 FIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW 406
F + NE +L + H NI+KL+ +K +L+ E+ + G LF + N E D
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 407 AKRVNIVKAMAHALAYL------HHDCSPS-------------------IASTCPDSSNR 441
A NI+K + + YL H D P ++S
Sbjct: 149 A---NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 442 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 206 RDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 41 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 95
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 96 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 153
Query: 425 -----HDCSPSIA--------STCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + I S S L+G+ ++APE+ + M +K
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 210
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VYKA+ G++ ALK++ +E + R E +L ++ H NIV L +
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSER 92
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMAHALAY--LHHDCSPSIAS 433
C+ L++E+M++ L L N+ ++ K +++ +AH + LH D P
Sbjct: 93 CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 434 TCPDSSNRTL---LAGTYG--------------YIAPE-LAYTMVMTEKCDVYSFGVVTL 475
D + + LA +G Y AP+ L + + D++S G +
Sbjct: 152 INSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 476 EVLMGK 481
E++ GK
Sbjct: 212 EMITGK 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 36/195 (18%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+
Sbjct: 37 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTAP 92
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ + ++ ++ + SL+ +LH +E E+ K ++I + A + YLH
Sbjct: 93 Q-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 425 -----HDCSPSIA--------STCPDSSNRTLLAGTYGYIAPE---LAYTMVMTEKCDVY 468
D + I S S L+G+ ++APE + + + + DVY
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 469 SFGVVTLEVLMGKHP 483
+FG+V E++ G+ P
Sbjct: 210 AFGIVLYELMTGQLP 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VYKA+ G++ ALK++ +E + R E +L ++ H NIV L +
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSER 92
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMAHALAY--LHHDCSPSIAS 433
C+ L++E+M++ L L N+ ++ K +++ +AH + LH D P
Sbjct: 93 CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 434 TCPDSSNRTL---LAGTYG--------------YIAPE-LAYTMVMTEKCDVYSFGVVTL 475
D + + LA +G Y AP+ L + + D++S G +
Sbjct: 152 INSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 476 EVLMGK 481
E++ GK
Sbjct: 212 EMITGK 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 48 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 102
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 103 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 160
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 217
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 49 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 103
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 161
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 162 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 218
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 40 FGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 95
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L++E+M+ G L L A E +++ + MA+ +H D + A
Sbjct: 96 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA---AR 152
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 212
Query: 473 VTLEVL-MGKHPRD 485
+ EV GK P +
Sbjct: 213 LMWEVFSEGKIPYE 226
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 46 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 103 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 158
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 159 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
Query: 478 L 478
Sbjct: 218 F 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 43 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 100 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 155
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 156 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
Query: 478 L 478
Sbjct: 215 F 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 39 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 151
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 152 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 478 L 478
Sbjct: 211 F 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 70 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 182
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 183 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 478 L 478
Sbjct: 242 F 242
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 42 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 99 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 154
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 155 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 478 L 478
Sbjct: 214 F 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 39 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 151
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 152 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 478 L 478
Sbjct: 211 F 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 37 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 94 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 149
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 150 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
Query: 478 L 478
Sbjct: 209 F 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 39 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 151
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 152 RVKI-GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 478 L 478
Sbjct: 211 F 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 38 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 95 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 150
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 151 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
Query: 478 L 478
Sbjct: 210 F 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 44 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 101 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 156
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 157 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
Query: 478 L 478
Sbjct: 216 F 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 45 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 102 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 157
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 158 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
Query: 478 L 478
Sbjct: 217 F 217
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+ +
Sbjct: 49 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYST-K 103
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 161
Query: 425 -----HDCSPSIA--------STCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + I S S L+G+ ++APE+ + M +K
Sbjct: 162 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 218
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 57 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 169
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 170 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 478 L 478
Sbjct: 229 F 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 57 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 169
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 170 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 478 L 478
Sbjct: 229 F 229
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 318 YGSVYKAQLPNGKVFALKKLH-TSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G+VYK + +G V A+K L+ T+ T + +++F+NE VL + H NI+ G+
Sbjct: 21 FGTVYKGKW-HGDV-AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTAP 76
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------ 424
+ + ++ ++ + SL+ +LH E E+ K ++I + A + YLH
Sbjct: 77 Q-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKSIIHRDLKSN 133
Query: 425 -----HDCS--------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK------C 465
D + ++ S S L+G+ ++APE+ + M +K
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQS 190
Query: 466 DVYSFGVVTLEVLMGKHP 483
DVY+FG+V E++ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 39 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 97
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S++ H+NIV+ G L F++ E M G L L L
Sbjct: 98 ---EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 213
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 267
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 321 PDVINTAL 328
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 43/184 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL- 391
A+K L TE + F +EA ++ Q H NI++L G + ++ EYM+ GSL
Sbjct: 81 AIKALKAGYTERQR--RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 392 -FCNLHNNEDAVELDWAKRVNIVKAMAHA------LAYLHHD-------------CSPS- 430
F H+ + + + V +++ + L Y+H D C S
Sbjct: 139 TFLRTHDGQFTI----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 431 -----IASTCPDSSNRTLLAGTYGYI-----APELAYTMVMTEKCDVYSFGVVTLEVLM- 479
+ PD++ T T G I APE + DV+SFGVV EVL
Sbjct: 195 FGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 480 GKHP 483
G+ P
Sbjct: 251 GERP 254
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 328 NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMK 387
G+V+A+K ++ + + + FR E VL R I +L+ ++L+ EY
Sbjct: 85 TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144
Query: 388 RGSLFCNLHNNEDAVELDWAK--RVNIVKAM--AHALAYLHHDCSPS--IASTC------ 435
G L L + + + A+ IV A+ H L Y+H D P + C
Sbjct: 145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLA 204
Query: 436 ---------PDSSNRTLLA-GTYGYIAPELAYTMVMTE-------KCDVYSFGVVTLEVL 478
D + R+L+A GT Y++PE+ + +CD ++ GV E+
Sbjct: 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264
Query: 479 MGKHP 483
G+ P
Sbjct: 265 YGQTP 269
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 25 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 83
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S++ H+NIV+ G L F++ E M G L L L
Sbjct: 84 ---EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 199
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 253
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 307 PDVINTAL 314
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 46/237 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K L + TE+ + F +EA ++ Q H N++ L G + +I E+M+ GSL
Sbjct: 39 AIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHD-------------CSPSIAS 433
L N+ + + V +++ +A + YL H C S
Sbjct: 97 SFLRQNDGQFTV--IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFG 154
Query: 434 TC----PDSSNRTLLAGTYGYI-----APELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
D+S+ T + G I APE T DV+S+G+V EV+ G+ P
Sbjct: 155 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
Query: 484 RDXXXXXXXXXDPKIMLIDVLDQRLPPPVD-RKVIRDILLASTISFACLQSNPKSRP 539
+ ++ D RLPPP+D + ++L C Q + RP
Sbjct: 215 ------YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML------DCWQKDRNHRP 259
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 16 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 74
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 75 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 132 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 190
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 244
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 245 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 297
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 298 PDVINTAL 305
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA---KR 409
+E VL Q+ H NI+KLY F ++ +L+ E + G LF + + E+D A K+
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 410 VNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTLLA---------------------GTY 448
V H +H D P + +S +R L GT
Sbjct: 130 VLSGTTYLHKHNIVHRDLKPE--NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 188 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 52/262 (19%)
Query: 318 YGSVYKAQL--PNGK--VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 373
+G V + +L P K A+K L TE + F +EA ++ Q H NI++L G
Sbjct: 29 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIRLEGVV 86
Query: 374 LHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HH 425
+ + ++ E+M+ G+L F L++ + V + V +++ +A + YL H
Sbjct: 87 TNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 426 D-------------CSPS-------IASTCPDSSNRTLLAGT--YGYIAPELAYTMVMTE 463
D C S + D + + L G + APE T
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTS 202
Query: 464 KCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILL 522
D +S+G+V EV+ G+ P + ++ D RLPPP D L+
Sbjct: 203 ASDAWSYGIVMWEVMSFGERP------YWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLM 256
Query: 523 ASTISFACLQSNPKSRPTMQYV 544
C Q + +RP V
Sbjct: 257 -----LDCWQKDRNARPRFPQV 273
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 307 IDVFSIWNYDGYGS---VYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
I+ F + N G GS VY+A+ + G A+K + + ++ +NE ++ Q+
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAMA--H 418
H +I++LY + ++L+ E G + L N + A+ I+ M H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 419 ALAYLHHDCSPS-----------IAS-------TCPDSSNRTLLAGTYGYIAPELAYTMV 460
+ LH D + S IA P + TL GT YI+PE+A
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-CGTPNYISPEIATRSA 188
Query: 461 MTEKCDVYSFGVVTLEVLMGKHPRD 485
+ DV+S G + +L+G+ P D
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 82
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 83 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 198
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 252
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 306 PDVINTAL 313
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 30/191 (15%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K L +++F EA ++ + H +V+LY +
Sbjct: 26 FGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTREE 81
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM +GSL L ++E L K ++ +A +A Y+H D +
Sbjct: 82 PIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN 140
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 141 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGIL 200
Query: 474 TLEVL-MGKHP 483
E++ GK P
Sbjct: 201 LYEIVTYGKIP 211
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 82
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 83 ---EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 198
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 252
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 306 PDVINTAL 313
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 39 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 97
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 98 ---EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 213
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 267
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 321 PDVINTAL 328
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 328 NGKVFALK--KLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
+G+ A+K L + EL F NE ++ H N+V++Y L + ++++ E+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLF-----NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123
Query: 386 MKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-------SPSI------- 431
++ G+L + V L+ + + +A+ ALAYLH S SI
Sbjct: 124 LQGGAL----TDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR 179
Query: 432 ---------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKH 482
A D R L GT ++APE+ + + D++S G++ +E++ G+
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 483 P 483
P
Sbjct: 240 P 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VYKAQ G+ FALKK+ + +E + R E +L ++ H NIVKLY +K
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKK 73
Query: 378 CMFLIYEYMKR 388
+ L++E++ +
Sbjct: 74 RLVLVFEHLDQ 84
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VYKAQ G+ FALKK+ + +E + R E +L ++ H NIVKLY +K
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKK 73
Query: 378 CMFLIYEYMKR 388
+ L++E++ +
Sbjct: 74 RLVLVFEHLDQ 84
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNI 412
E VL + H NI+KLY F ++ +L+ E K G LF + + E+D A I
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---I 141
Query: 413 VKAMAHALAYLH------HDCSPS---IASTCPDS-------------SNRTLLA---GT 447
+K + + YLH D P + S D+ N+ + GT
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 448 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 202 AYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPP 236
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VYKAQ G+ FALKK+ + +E + R E +L ++ H NIVKLY +K
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKK 73
Query: 378 CMFLIYEYMKR 388
+ L++E++ +
Sbjct: 74 RLVLVFEHLDQ 84
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 42 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 100
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 101 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 158 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGY 216
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 270
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 271 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 323
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 324 PDVINTAL 331
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 25 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 83
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 84 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYRASY 199
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 253
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 307 PDVINTAL 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 25 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 83
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 84 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 199
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 253
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 307 PDVINTAL 314
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 123
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 124 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGY 239
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 293
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 294 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 346
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 347 PDVINTAL 354
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 31 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 89
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 90 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 147 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 205
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 259
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 260 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 312
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 313 PDVINTAL 320
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 52/262 (19%)
Query: 318 YGSVYKAQL--PNGK--VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 373
+G V + +L P K A+K L TE + F +EA ++ Q H NI++L G
Sbjct: 27 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIRLEGVV 84
Query: 374 LHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HH 425
+ + ++ E+M+ G+L F L++ + V + V +++ +A + YL H
Sbjct: 85 TNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 426 D-------------CSPS-------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTE 463
D C S + D + + L G + APE T
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 464 KCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILL 522
D +S+G+V EV+ G+ P + ++ D RLPPP D L+
Sbjct: 201 ASDAWSYGIVMWEVMSFGERP------YWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLM 254
Query: 523 ASTISFACLQSNPKSRPTMQYV 544
C Q + +RP V
Sbjct: 255 -----LDCWQKDRNARPRFPQV 271
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 39 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM- 97
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 98 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 213
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 267
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 321 PDVINTAL 328
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K + E FI+ EA+V+ ++ H +V+LYG CL +
Sbjct: 21 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQA 76
Query: 378 CMFLIYEYMKRGSLFCNLHNNED--AVELDWAKRVNIVKAMAH--ALAYLHHDCSPSIAS 433
+ L+ E+M+ G L L A E +++ + MA+ +H D + A
Sbjct: 77 PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA---AR 133
Query: 434 TCPDSSNRTLLAGTYG---------------------YIAPELAYTMVMTEKCDVYSFGV 472
C N+ + +G + +PE+ + K DV+SFGV
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 193
Query: 473 VTLEVL-MGKHPRD 485
+ EV GK P +
Sbjct: 194 LMWEVFSEGKIPYE 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLH--------NN 398
+ F+ EA++L+ + H++IV+ +G C + + +++EYM+ G L F H
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
Query: 399 EDAV--ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG- 449
ED L + + + +A + YL H D + C + G +G
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGM 204
Query: 450 ---------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 483
++ PE T + DV+SFGVV E+ GK P
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
++ ++ I + G V+ A+ L + + A+K L + +F FR EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 363 HRNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVN 411
H IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 412 IVKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYI 451
+H +H D P+ IA DS N + GT Y+
Sbjct: 131 ----FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+PE A + + DVYS G V EVL G+ P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA---KR 409
+E VL Q+ H NI+KLY F ++ +L+ E + G LF + + E+D A K+
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 410 VNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTLLA---------------------GTY 448
V H +H D P + +S +R L GT
Sbjct: 113 VLSGTTYLHKHNIVHRDLKPE--NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 171 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP 204
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 41 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 99
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 100 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 157 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 215
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 269
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 270 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 322
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 323 PDVINTAL 330
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 42 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSN 440
GSL L + A +D K + + + YL H D + + ++ N
Sbjct: 99 PYGSLRDYLQAH--AERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA--TRNILVENEN 154
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 155 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 478 L 478
Sbjct: 214 F 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 52 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 168 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 227
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 228 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
++ ++ I + G V+ A+ L + + A+K L + +F FR EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 363 HRNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVN 411
H IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 412 IVKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYI 451
+H +H D P+ IA DS N + GT Y+
Sbjct: 131 ----FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+PE A + + DVYS G V EVL G+ P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 362
++ ++ I + G V+ A+ L + + A+K L + +F FR EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 363 HRNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVN 411
H IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 412 IVKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYI 451
+H +H D P+ IA DS N + GT Y+
Sbjct: 131 ----FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+PE A + + DVYS G V EVL G+ P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 40/264 (15%)
Query: 317 GYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G GS KA L +G+ + +K+++ S +S R E VL+ + H NIV+
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRES 91
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNN------EDAVELDWAKRVNIVKAMAHALAYLHHD 426
++++ +Y + G LF ++ ED + LDW ++ + H LH D
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQICLALKHVHDRKILHRD 150
Query: 427 CSPSIASTCPDSS------------NRTL-LA----GTYGYIAPELAYTMVMTEKCDVYS 469
D + N T+ LA GT Y++PE+ K D+++
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 470 FGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFA 529
G V E+ KH + K +++ ++ PPV D L S +S
Sbjct: 211 LGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSF-PPVSLHYSYD--LRSLVS-Q 259
Query: 530 CLQSNPKSRPTMQYVSQEFLITRK 553
+ NP+ RP++ + ++ I ++
Sbjct: 260 LFKRNPRDRPSVNSILEKGFIAKR 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLH--------NN 398
+ F+ EA++L+ + H++IV+ +G C + + +++EYM+ G L F H
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 399 EDAV--ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG- 449
ED L + + + +A + YL H D + C + G +G
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGM 175
Query: 450 ---------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 483
++ PE T + DV+SFGVV E+ GK P
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI E++
Sbjct: 42 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H D + + ++ N
Sbjct: 99 PYGSLREYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRDL--ATRNILVENEN 154
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 155 RVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 478 L 478
Sbjct: 214 F 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 43 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 99 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 159 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 218
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 219 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 87/236 (36%), Gaps = 44/236 (18%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 52 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTLLAGTY 448
L H + L+ K V + +LH D + A C + + +
Sbjct: 108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDF 164
Query: 449 G---------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDX 486
G + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 165 GLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 487 XXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 225 FTNSETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 269
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLH--------NN 398
+ F+ EA++L+ + H++IV+ +G C + + +++EYM+ G L F H
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 399 EDAV--ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG- 449
ED L + + + +A + YL H D + C + G +G
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGM 181
Query: 450 ---------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 483
++ PE T + DV+SFGVV E+ GK P
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 48/237 (20%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K L T++ + F +EA ++ Q H NI+ L G K + +I EYM+ GSL
Sbjct: 61 AIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 118
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAG 446
L N+ + + V +++ + + YL H D + A +SN
Sbjct: 119 AFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSAVHRDLA---ARNILVNSNLVCKVS 173
Query: 447 TYGYIA-----PELAYTMV------------------MTEKCDVYSFGVVTLEVL-MGKH 482
+G PE AYT T DV+S+G+V EV+ G+
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 483 PRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRP 539
P + ++ RLPPP+D + L+ C Q RP
Sbjct: 234 P------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLM-----LDCWQKERSDRP 279
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 100/269 (37%), Gaps = 66/269 (24%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG VY K ++L + E+ ++ F EA V+ ++ H N+V+L G C
Sbjct: 45 YGEVYVGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 378 CMFLIYEYMKRGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIA 432
+++ EYM G+L CN V L A +++ ++H D + A
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLA---A 158
Query: 433 STCPDSSNRTLLAGTYG---------------------YIAPE-LAYTMVMTEKCDVYSF 470
C N + +G + APE LAY + K DV++F
Sbjct: 159 RNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN-TFSIKSDVWAF 217
Query: 471 GVVTLEV-LMGKHPRDXXXXXXXXXDPKIMLIDVLD-----QRLP-----PPVDRKVIRD 519
GV+ E+ G P P I L V D R+ PP +++R
Sbjct: 218 GVLLWEIATYGMSPY-----------PGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMR- 265
Query: 520 ILLASTISFACLQSNPKSRPTMQYVSQEF 548
AC + +P RP+ Q F
Sbjct: 266 ---------ACWKWSPADRPSFAETHQAF 285
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 48/237 (20%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K L T++ + F +EA ++ Q H NI+ L G K + +I EYM+ GSL
Sbjct: 40 AIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 97
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAG 446
L N+ + + V +++ + + YL H D + A +SN
Sbjct: 98 AFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSYVHRDLA---ARNILVNSNLVCKVS 152
Query: 447 TYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKH 482
+G + APE T DV+S+G+V EV+ G+
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 483 PRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRP 539
P + ++ RLPPP+D + L+ C Q RP
Sbjct: 213 P------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLM-----LDCWQKERSDRP 258
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 37 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 93 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 153 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 213 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 254
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 48/237 (20%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K L T++ + F +EA ++ Q H NI+ L G K + +I EYM+ GSL
Sbjct: 46 AIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 103
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAG 446
L N+ + + V +++ + + YL H D + A +SN
Sbjct: 104 AFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSYVHRDLA---ARNILVNSNLVCKVS 158
Query: 447 TYGYIA-----PELAYTMV------------------MTEKCDVYSFGVVTLEVL-MGKH 482
+G PE AYT T DV+S+G+V EV+ G+
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 483 PRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRP 539
P + ++ RLPPP+D + L+ C Q RP
Sbjct: 219 P------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLM-----LDCWQKERSDRP 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 37 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 93 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 153 RYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 213 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 254
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 62/308 (20%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYKAQL------PNGKVFALKKLHT--SETEELAFIKS 350
L+E NI + + +G VY+ Q+ P+ A+K L SE +EL F+
Sbjct: 51 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM- 109
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE----DAVELDW 406
EA ++S+ H+NIV+ G L F++ E M G L L L
Sbjct: 110 ---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 407 AKRVNIVKAMAHALAYL--HHDCSPSIAS-----TCPDSSNRTLLAGTYG---------- 449
+++ + +A YL +H IA+ TCP R G +G
Sbjct: 167 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASY 225
Query: 450 ------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXXXDP 496
++ PE + T K D +SFGV+ E+ +G P +
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQ 279
Query: 497 KIMLIDVLDQRLPPPVD--RKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
+++ R+ PP + V R I C Q P+ RP + + +
Sbjct: 280 EVLEFVTSGGRMDPPKNCPGPVYR-------IMTQCWQHQPEDRPNFAIILERIEYCTQD 332
Query: 555 PLVKHAAI 562
P V + A+
Sbjct: 333 PDVINTAL 340
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 36 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 91
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 92 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 152 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 211
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 212 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 253
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 53/250 (21%)
Query: 328 NGKVFALKK--LHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 385
GK A+KK L + EL F NE ++ H N+V +Y L ++++ E+
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLF-----NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEF 123
Query: 386 MKRGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-------SPSI---- 431
++ G+L + NE+ + + ++ AL+YLH+ S SI
Sbjct: 124 LEGGALTDIVTHTRMNEEQI-------ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS 176
Query: 432 ------------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
A + R L GT ++APE+ + + D++S G++ +E++
Sbjct: 177 DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 480 GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRP 539
G+ P +P + + + LPP V +D+ S++ L P
Sbjct: 237 GEPP--------YFNEPPLQAMRRIRDSLPPRV-----KDLHKVSSVLRGFLDLMLVREP 283
Query: 540 TMQYVSQEFL 549
+ + +QE L
Sbjct: 284 SQRATAQELL 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 39/181 (21%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMFLIYEYM 386
G+V A+KKL S E L + F E ++L + H NIVK G C R+ + LI EY+
Sbjct: 40 GEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 387 KRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHDCSPSIASTCPDSSN 440
GSL L +++ ++ L + + I K M + Y+H + + + ++ N
Sbjct: 97 PYGSLRDYLQKHKERIDHIKLLQYTSQ--ICKGMEYLGTKRYIHRNL--ATRNILVENEN 152
Query: 441 RTLLAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
R + G +G + APE + DV+SFGVV E+
Sbjct: 153 RVKI-GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
Query: 478 L 478
Sbjct: 212 F 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 51/286 (17%)
Query: 307 IDVFSIWNYDGYGSVYKAQ----LPNGKVFALKKLHTS----ETEELAFIKSFRNEAQVL 358
++ + GYG V++ + GK+FA+K L + ++ A K+ RN +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN---IL 75
Query: 359 SQVLHRNIVKL-YGFCLHRKCMFLIYEYMKRGSLFCNLHNN----EDAVELDWAKRVNIV 413
+V H IV L Y F K ++LI EY+ G LF L ED A+ +++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 414 KAMAHALAYLHHDCSPS-----------------IASTCPDSSNRTLLAGTYGYIAPELA 456
H ++ D P + D + GT Y+APE+
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 457 YTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLP-PPVDRK 515
D +S G + ++L G P + K + +L +L PP +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP-------FTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 516 VIRDIL--LASTISFACLQSNP------KSRPTMQYVSQEFLITRK 553
RD+L L + + L + P ++ P ++++ E L+ RK
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 51/286 (17%)
Query: 307 IDVFSIWNYDGYGSVYKAQ----LPNGKVFALKKLHTS----ETEELAFIKSFRNEAQVL 358
++ + GYG V++ + GK+FA+K L + ++ A K+ RN +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN---IL 75
Query: 359 SQVLHRNIVKL-YGFCLHRKCMFLIYEYMKRGSLFCNLHNN----EDAVELDWAKRVNIV 413
+V H IV L Y F K ++LI EY+ G LF L ED A+ +++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 414 KAMAHALAYLHHDCSPS-----------------IASTCPDSSNRTLLAGTYGYIAPELA 456
H ++ D P + D + GT Y+APE+
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 457 YTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLP-PPVDRK 515
D +S G + ++L G P + K + +L +L PP +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP-------FTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 516 VIRDIL--LASTISFACLQSNP------KSRPTMQYVSQEFLITRK 553
RD+L L + + L + P ++ P ++++ E L+ RK
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 38/233 (16%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A+K + E FI+ EA+V+ + H +V+LYG C ++ +F+I EYM G L
Sbjct: 32 AIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 393 CNL----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIASTCPDSSN 440
L H + L+ K V + +LH D + + +
Sbjct: 88 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
Query: 441 RTLLAGTYG----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXX 489
R +L Y + PE+ + K D+++FGV+ E+ +GK P +
Sbjct: 148 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 207
Query: 490 XXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQ 542
+ L P KV TI ++C RPT +
Sbjct: 208 SETAEH----IAQGLRLYRPHLASEKVY-------TIMYSCWHEKADERPTFK 249
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 317 GYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ + QL + KV+A+K L E + + F E +++ +V+L+
Sbjct: 84 GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA 143
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMA--HALAYLHHDCS 428
K ++++ EYM G L NL +N D E WAK +V A+ H++ +H D
Sbjct: 144 FQDDKYLYMVMEYMPGGDL-VNLMSNYDVPE-KWAKFYTAEVVLALDAIHSMGLIHRDVK 201
Query: 429 P-------------SIASTCPDSSNRTLL-----AGTYGYIAPELAYTM----VMTEKCD 466
P + TC ++ GT YI+PE+ + +CD
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECD 261
Query: 467 VYSFGVVTLEVLMGKHP 483
+S GV E+L+G P
Sbjct: 262 WWSVGVFLFEMLVGDTP 278
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 39/211 (18%)
Query: 308 DVFSIWNYDGYGSVYKAQLPNG----KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH 363
D + + G+G + + L + A+K L + +F FR EAQ + + H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 364 RNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVNI 412
IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN- 130
Query: 413 VKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYIA 452
+H +H D P+ IA DS N + GT Y++
Sbjct: 131 ---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 453 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PE A + + DVYS G V EVL G+ P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 308 DVFSIWNYDGYGS---VYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH 363
D F + + G G+ VY+ Q K +ALK L + +++ R E VL ++ H
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV-----RTEIGVLLRLSH 107
Query: 364 RNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 423
NI+KL + L+ E + G LF + E D A + VK + A+AYL
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA---DAVKQILEAVAYL 164
Query: 424 HH------DCSPS---IASTCPDS-------------SNRTLLA---GTYGYIAPELAYT 458
H D P A+ PD+ ++ L+ GT GY APE+
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG 224
Query: 459 MVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D++S G++T +L G P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 48/231 (20%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ + K YG L +++I EY+ GS L A D +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIAT 124
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
++K + L YLH + +A D+ R GT
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 184
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P D M + L +
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN---------SDMHPMRVLFLIPKN 235
Query: 509 PPPVDRKVIRDILLASTISF-----ACLQSNPKSRPTMQYVSQEFLITRKT 554
PP ++ D T SF ACL +P RPT + + + I + +
Sbjct: 236 NPPT---LVGDF----TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G+VYK + +G V A+K L + F ++FRNE VL + H NI+ G+ + +
Sbjct: 49 FGTVYKGKW-HGDV-AVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMGY-MTKD 104
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------------- 424
+ ++ ++ + SL+ +LH E ++ + ++I + A + YLH
Sbjct: 105 NLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKNIIHRDMKSNN 162
Query: 425 ---HDCS---------PSIASTCPDSSNRTLLAGTYGYIAPELAYTMV---MTEKCDVYS 469
H+ ++ S S G+ ++APE+ + + DVYS
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222
Query: 470 FGVVTLEVLMGKHP 483
+G+V E++ G+ P
Sbjct: 223 YGIVLYELMTGELP 236
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 317 GYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ + QL KV+A+K L E + + F E +++ +V+L+
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMA--HALAYLHHDCS 428
+ ++++ EYM G L NL +N D E WA+ +V A+ H++ ++H D
Sbjct: 143 FQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGFIHRDVK 200
Query: 429 P-------------SIASTCPDSSNRTLL-----AGTYGYIAPELAYTM----VMTEKCD 466
P + TC + ++ GT YI+PE+ + +CD
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 467 VYSFGVVTLEVLMGKHP 483
+S GV E+L+G P
Sbjct: 261 WWSVGVFLYEMLVGDTP 277
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 60/233 (25%)
Query: 301 ERATNNIDVFSIWNYDGYGSVYKAQLPN------GKVFALKKLHTSETEELAFIKSFRNE 354
E NNI+ +G V++A+ P + A+K L + ++ F+ E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ--ADFQRE 100
Query: 355 AQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL-----------FCNLHNNEDAVE 403
A ++++ + NIVKL G C K M L++EYM G L C+L +++ +
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 404 ----------LDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGT 447
L A+++ I + +A +AYL H D + C N +
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA---TRNCLVGENMVVKIAD 217
Query: 448 YG----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+G ++ PE + T + DV+++GVV E+
Sbjct: 218 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 317 GYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ + QL KV+A+K L E + + F E +++ +V+L+
Sbjct: 78 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 137
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMA--HALAYLHHDCS 428
+ ++++ EYM G L NL +N D E WA+ +V A+ H++ ++H D
Sbjct: 138 FQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGFIHRDVK 195
Query: 429 P-------------SIASTCPDSSNRTLL-----AGTYGYIAPELAYTM----VMTEKCD 466
P + TC + ++ GT YI+PE+ + +CD
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 467 VYSFGVVTLEVLMGKHP 483
+S GV E+L+G P
Sbjct: 256 WWSVGVFLYEMLVGDTP 272
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 318 YGSVYKAQLPN-GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG V K + + G++ A+KK S+ +++ + R E ++L Q+ H N+V L C +
Sbjct: 38 YGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLVNLLEVCKKK 96
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMA--HALAYLHHDCSPS-- 430
K +L++E++ ++ +L + ++ ++ I+ + H+ +H D P
Sbjct: 97 KRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI 155
Query: 431 ------IASTCPDSSNRTLLA---------GTYGYIAPELAYTMVMTEKC-DVYSFGVVT 474
+ C RTL A T Y APEL V K DV++ G +
Sbjct: 156 LVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215
Query: 475 LEVLMGK 481
E+ MG+
Sbjct: 216 TEMFMGE 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH N++ L+ +R + LI E + G LF L E L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 317 GYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ + QL KV+A+K L E + + F E +++ +V+L+
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK--RVNIVKAMA--HALAYLHHDCS 428
+ ++++ EYM G L NL +N D E WA+ +V A+ H++ ++H D
Sbjct: 143 FQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGFIHRDVK 200
Query: 429 P-------------SIASTCPDSSNRTLL-----AGTYGYIAPELAYTM----VMTEKCD 466
P + TC + ++ GT YI+PE+ + +CD
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 467 VYSFGVVTLEVLMGKHP 483
+S GV E+L+G P
Sbjct: 261 WWSVGVFLYEMLVGDTP 277
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH N++ L+ +R + LI E + G LF L E E +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 38/224 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ + K YG L +++I EY+ GS L LD +
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIAT 128
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
I++ + L YLH + +A D+ R GT
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P K++ + + +
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL--IPKNN 240
Query: 509 PPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
PP ++ + + ACL P RPT + + + I R
Sbjct: 241 PPTLEGNYSKPL---KEFVEACLNKEPSFRPTAKELLKHKFILR 281
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 39/211 (18%)
Query: 308 DVFSIWNYDGYGSVYKAQLPNG----KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH 363
D + + G+G + + L + A+K L + +F FR EAQ + + H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 364 RNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVNI 412
IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN- 130
Query: 413 VKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYIA 452
+H +H D P+ IA DS N + GT Y++
Sbjct: 131 ---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 453 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PE A + + DVYS G V EVL G+ P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 41/191 (21%)
Query: 323 KAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 382
K +LP A+K L TE+ + F EA ++ Q H NI+ L G K + ++
Sbjct: 48 KRELP----VAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIV 101
Query: 383 YEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCP 436
EYM+ GSL L N+ + + V +++ ++ + YL H D + A
Sbjct: 102 TEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYLSDMGYVHRDLA---ARNIL 156
Query: 437 DSSNRTLLAGTYGYIA-----PELAYTMV------------------MTEKCDVYSFGVV 473
+SN +G PE AYT T DV+S+G+V
Sbjct: 157 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIV 216
Query: 474 TLEVL-MGKHP 483
EV+ G+ P
Sbjct: 217 MWEVVSYGERP 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 38/224 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ + K YG L +++I EY+ GS L + LD +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 108
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
I++ + L YLH + +A D+ R GT
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP 168
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P K++ + + +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL--IPKNN 220
Query: 509 PPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
PP ++ + + ACL P RPT + + + I R
Sbjct: 221 PPTLEGNYSKPL---KEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH N++ L+ +R + LI E + G LF L E L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH N++ L+ +R + LI E + G LF L E E +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 38/224 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ + K YG L +++I EY+ GS L + LD +
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 123
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
I++ + L YLH + +A D+ R GT
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP 183
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P K++ + + +
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL--IPKNN 235
Query: 509 PPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
PP ++ + + ACL P RPT + + + I R
Sbjct: 236 PPTLEGNYSKPL---KEFVEACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 38/224 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ + K YG L +++I EY+ GS L + LD +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 108
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
I++ + L YLH + +A D+ R GT
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 168
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P K++ + + +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL--IPKNN 220
Query: 509 PPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
PP ++ + + ACL P RPT + + + I R
Sbjct: 221 PPTLEGNYSKPL---KEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 54/279 (19%)
Query: 306 NIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV 361
N D + + G G+ Q P + A+K+++ + + + E Q +SQ
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQC 65
Query: 362 LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN-----NEDAVELDWAKRVNIVKAM 416
H NIV Y + + ++L+ + + GS+ + + + LD + I++ +
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 417 AHALAYLH-----------------HDCSPSIA--------STCPDSSN---RTLLAGTY 448
L YLH D S IA +T D + R GT
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 449 GYIAPELAYTMVMTE-KCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQR 507
++APE+ + + K D++SFG+ +E+ G P P + ++ + Q
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY--------PPMKVLMLTLQN 237
Query: 508 LPPPVDRKVI-RDILLASTISFA-----CLQSNPKSRPT 540
PP ++ V +++L SF CLQ +P+ RPT
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH N++ L+ +R + LI E + G LF L E L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 41/221 (18%)
Query: 292 RKYKKPKLEERATNNIDVFSIWNYDGYGSVYKA-QLPNGKVFALKKLHTSETEELAFIKS 350
+K + L ++ DV YGSVYKA G++ A+K++ E++ IK
Sbjct: 16 KKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV-ESDLQEIIK- 73
Query: 351 FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL--FCNLHNN---EDAVELD 405
E ++ Q ++VK YG ++++ EY GS+ L N ED +
Sbjct: 74 ---EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI--- 127
Query: 406 WAKRVNIVKAMAHALAYLH------HDCSPS----------------IASTCPDS-SNRT 442
I+++ L YLH D +A D + R
Sbjct: 128 ----ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRN 183
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + D++S G+ +E+ GK P
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 54/279 (19%)
Query: 306 NIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV 361
N D + + G G+ Q P + A+K+++ + + + E Q +SQ
Sbjct: 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQC 70
Query: 362 LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN-----NEDAVELDWAKRVNIVKAM 416
H NIV Y + + ++L+ + + GS+ + + + LD + I++ +
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 417 AHALAYLH-----------------HDCSPSIA--------STCPDSSN---RTLLAGTY 448
L YLH D S IA +T D + R GT
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 449 GYIAPELAYTMVMTE-KCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQR 507
++APE+ + + K D++SFG+ +E+ G P P + ++ + Q
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY--------PPMKVLMLTLQN 242
Query: 508 LPPPVDRKVI-RDILLASTISFA-----CLQSNPKSRPT 540
PP ++ V +++L SF CLQ +P+ RPT
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 39/211 (18%)
Query: 308 DVFSIWNYDGYGSVYKAQLPNG----KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH 363
D + + G+G + + L + A+K L + +F FR EAQ + + H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 364 RNIVKLYGFCLHRKCM----FLIYEYMKRGSLFCNLHNN-----EDAVEL--DWAKRVNI 412
IV +Y +++ EY+ +L +H + A+E+ D + +N
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN- 147
Query: 413 VKAMAHALAYLHHDCSPS----------------IASTCPDSSNR----TLLAGTYGYIA 452
+H +H D P+ IA DS N + GT Y++
Sbjct: 148 ---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 453 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PE A + + DVYS G V EVL G+ P
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 54/227 (23%)
Query: 302 RATNNIDVFSIWNYDGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ 360
R ++ + ++ +G V KA+ + + +A+KK+ +E E+L+ I S E +L+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILS---EVMLLAS 58
Query: 361 VLHRNIVKLYGFCLHRK-------------CMFLIYEYMKRGSLFCNLHNNEDAVELD-- 405
+ H+ +V+ Y L R+ +F+ EY + G+L+ +H+ + D
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 406 WAKRVNIVKAMA--HALAYLHHDCSPS------------------------------IAS 433
W I++A++ H+ +H D P +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 434 TCPDSS-NRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVL 478
P SS N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 325 QLPNGKVFALKKLHTSETEELAFIKS-FRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 383
Q GK+FALK + S AF S NE VL ++ H NIV L +L+
Sbjct: 30 QRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85
Query: 384 EYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSP-SIASTCP 436
+ + G LF + E D + +++ + A+ YLH D P ++ P
Sbjct: 86 QLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHENGIVHRDLKPENLLYLTP 142
Query: 437 DSSNRTLLA-----------------GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
+ +++ ++ GT GY+APE+ ++ D +S GV+T +L
Sbjct: 143 EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC 202
Query: 480 GKHP 483
G P
Sbjct: 203 GYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G FA K ++T + F K EA++ ++ H NIV+L+ +L+++ +
Sbjct: 31 GLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAMA--HALAYLHHDCSPS--------------- 430
G LF ++ E E D + + I++++A H+ +H + P
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 431 ----IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A DS AGT GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G FA K ++T + F K EA++ ++ H NIV+L+ +L+++ +
Sbjct: 54 GLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAMA--HALAYLHHDCSPS--------------- 430
G LF ++ E E D + + I++++A H+ +H + P
Sbjct: 113 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 172
Query: 431 ----IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A DS AGT GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 173 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIV 413
E ++L ++ H NI+KL+ +++ E G LF + + E D A+ I+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---II 127
Query: 414 KAMAHALAYLHH--------------------DCSPSIA----STCPDSSNRTL-LAGTY 448
K + + Y+H DC I STC + + GT
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 188 YYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G FA K ++T + F K EA++ ++ H NIV+L+ +L+++ +
Sbjct: 30 GLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 88
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAMA--HALAYLHHDCSPS--------------- 430
G LF ++ E E D + + I++++A H+ +H + P
Sbjct: 89 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 431 ----IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A DS AGT GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 149 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
G FA K ++T + F K EA++ ++ H NIV+L+ +L+++ +
Sbjct: 31 GLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAMA--HALAYLHHDCSPS--------------- 430
G LF ++ E E D + + I++++A H+ +H + P
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 431 ----IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A DS AGT GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 300 EERATNNIDVFSIWNYDGYGSVY---KAQLPN-GKVFALKKLHTSETEELAFIKSFRNEA 355
E+ ++ ++ + +G V+ K P+ G ++A+K L + + +++ + E
Sbjct: 23 EKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMER 81
Query: 356 QVLSQVLHRNIVKL-YGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVN 411
+L+ V H +VKL Y F K ++LI ++++ G LF L E D + +
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 412 IVKAMAHALAYLHHDCSPS----------------IASTCPDSSNRTL-LAGTYGYIAPE 454
+ H+L ++ D P ++ D + GT Y+APE
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 455 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ + D +S+GV+ E+L G P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 35 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 89
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 90 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 148
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 474 TLEVL 478
E++
Sbjct: 209 LTEIV 213
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 305 NNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKL---HTSETEELAFIKSFRNEAQVLSQ 360
++ D+ +G V++ + G FA K + H S+ E + R E Q +S
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE------TVRKEIQTMSV 210
Query: 361 VLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN---NEDAVELDWAKRVNIVK 414
+ H +V L+ M +IYE+M G LF + HN ++AVE + ++V
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGL 268
Query: 415 AMAHALAYLHHDCSPSIASTCPDSSNRTLL------------------AGTYGYIAPELA 456
H Y+H D P SN L GT + APE+A
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 457 YTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D++S GV++ +L G P
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNE-DAVELDW 406
++ E +VL + H NI+K++ M+++ E + G L + + + L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 407 AKRVNIVKAMAHALAYLH----------------HDCSP---------SIASTCPDSSNR 441
++K M +ALAY H D SP +A +
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 442 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
T AGT Y+APE+ + +T KCD++S GVV +L G
Sbjct: 184 TNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 53/272 (19%)
Query: 318 YGSVYKA-QLPNGKVF----ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
+G+VYK +P G+ A+K L +ET F +EA +++ + H ++V+L G
Sbjct: 51 FGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLVRLLGV 108
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHHD 426
CL + L+ + M G L +H ++D + L+W V I K M + +H D
Sbjct: 109 CL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMMYLEERRLVHRD 165
Query: 427 -CSPSIASTCPDSSNRT------LLAGT------------YGYIAPELAYTMVMTEKCDV 467
+ ++ P+ T LL G ++A E + T + DV
Sbjct: 166 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 225
Query: 468 YSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLD--QRLP-PPVDRKVIRDILLA 523
+S+GV E++ G P D P + D+L+ +RLP PP+ D+ +
Sbjct: 226 WSYGVTIWELMTFGGKPYDGI--------PTREIPDLLEKGERLPQPPI---CTIDVYM- 273
Query: 524 STISFACLQSNPKSRPTMQYVSQEFLITRKTP 555
+ C + SRP + ++ EF + P
Sbjct: 274 --VMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 319 GSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
G+VY A + G+ A+++++ + + I NE V+ + + NIV L
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVNYLDSYLVGD 91
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHH--------- 425
++++ EY+ GSL D V +D + + + AL +LH
Sbjct: 92 ELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 426 --------DCSPSI------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
D S + A P+ S R+ + GT ++APE+ K D++S G
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 472 VVTLEVLMGKHP 483
++ +E++ G+ P
Sbjct: 205 IMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 319 GSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
G+VY A + G+ A+++++ + + I NE V+ + + NIV L
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVNYLDSYLVGD 90
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHH--------- 425
++++ EY+ GSL D V +D + + + AL +LH
Sbjct: 91 ELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 426 --------DCSPSI------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
D S + A P+ S R+ + GT ++APE+ K D++S G
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 472 VVTLEVLMGKHP 483
++ +E++ G+ P
Sbjct: 204 IMAIEMIEGEPP 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 28 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 82
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 83 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 141
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 474 TLEVL 478
E++
Sbjct: 202 LTEIV 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 30/191 (15%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ N A+K L +++F EA ++ + H +V+LY +
Sbjct: 25 FGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEE 80
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I E+M +GSL L ++E L K ++ +A +A Y+H D +
Sbjct: 81 PIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN 139
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K +V+SFG++
Sbjct: 140 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGIL 199
Query: 474 TLEVL-MGKHP 483
E++ GK P
Sbjct: 200 LYEIVTYGKIP 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 319 GSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
G+VY A + G+ A+++++ + + I NE V+ + + NIV L
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVNYLDSYLVGD 91
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHH--------- 425
++++ EY+ GSL D V +D + + + AL +LH
Sbjct: 92 ELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 426 --------DCSPSI------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
D S + A P+ S R+ + GT ++APE+ K D++S G
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 472 VVTLEVLMGKHP 483
++ +E++ G+ P
Sbjct: 205 IMAIEMIEGEPP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 34 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 88
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 89 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 147
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 474 TLEVL 478
E++
Sbjct: 208 LTEIV 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 27 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 81
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 82 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 140
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 474 TLEVLM-GKHP 483
E++ G+ P
Sbjct: 201 LTEIVTHGRIP 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 319 GSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
G+VY A + G+ A+++++ + + I NE V+ + + NIV L
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVNYLDSYLVGD 90
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHH--------- 425
++++ EY+ GSL D V +D + + + AL +LH
Sbjct: 91 ELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 426 --------DCSPSI------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
D S + A P+ S R+ + GT ++APE+ K D++S G
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 472 VVTLEVLMGKHP 483
++ +E++ G+ P
Sbjct: 204 IMAIEMIEGEPP 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 80
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 81 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 474 TLEVL 478
E++
Sbjct: 200 LTEIV 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 80
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 81 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 474 TLEVL 478
E++
Sbjct: 200 LTEIV 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 50/223 (22%)
Query: 295 KKPKLEERATNNIDVFSIWNYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRN 353
+K K+ E ++ + S G V K Q P+G + A K +H L + RN
Sbjct: 6 QKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH------LEIKPAIRN 59
Query: 354 EAQVLSQVLHR----NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
+ QVLH IV YG + + E+M GSL D V L AKR
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL--------DQV-LKEAKR 110
Query: 410 V------NIVKAMAHALAYL-------HHDCSPS----------------IASTCPDSSN 440
+ + A+ LAYL H D PS ++ DS
Sbjct: 111 IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 170
Query: 441 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ + GT Y+APE + + D++S G+ +E+ +G++P
Sbjct: 171 NSFV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ E +L QVLH NI+ L+ +R + LI E + G LF L E L +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEE 116
Query: 409 RVNIVKAMAHALAYL------HHDCSPS--------------------IASTCPDSSNRT 442
+ +K + + YL H D P +A D
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT ++APE+ + + D++S GV+T +L G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 86
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 87 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 474 TLEVL 478
E++
Sbjct: 206 LTEIV 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNI 412
E ++L ++ H NI+KL+ +++ E G LF + + E D A+ I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---I 126
Query: 413 VKAMAHALAYLHH--------------------DCSPSIA----STCPDSSNRTL-LAGT 447
+K + + Y+H DC I STC + + GT
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 448 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 187 AYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 293 KYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFI 348
++K+ KL+E + + + D +G VYK L P + A+ + E
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-----HNNEDAVE 403
+ FR+EA + +++ H N+V L G + + +I+ Y G L L H++ + +
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 404 LDWAKR--------VNIVKAMAHALAYL--HHDCSPSIAST---CPDSSN---------R 441
D + V++V +A + YL HH +A+ D N R
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 442 TLLAGTY-----------GYIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ A Y ++APE + D++S+GVV EV
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 353 NEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNI 412
E ++L ++ H NI+KL+ +++ E G LF + + E D A+ I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---I 126
Query: 413 VKAMAHALAYLHH--------------------DCSPSIA----STCPDSSNRTL-LAGT 447
+K + + Y+H DC I STC + + GT
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 448 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
YIAPE+ EKCDV+S GV+ +L G P
Sbjct: 187 AYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 86
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 87 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 474 TLEVL 478
E++
Sbjct: 206 LTEIV 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
K+ KKL + ++L EA++ + H NIV+L+ +L+++ +
Sbjct: 34 AKIINTKKLSARDHQKL------EREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAM--AHALAYLHHDCSPS---IASTCPDSSNRT 442
G LF ++ E E D + + I++A+ H + +H D P +AS C ++ +
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 443 L-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
AGT GY++PE+ + D+++ GV+ +L+G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 80
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 81 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 474 TLEVLM-GKHP 483
E++ G+ P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 305 NNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKL---HTSETEELAFIKSFRNEAQVLSQ 360
++ D+ +G V++ + G FA K + H S+ E + R E Q +S
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE------TVRKEIQTMSV 104
Query: 361 VLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN---NEDAVELDWAKRVNIVK 414
+ H +V L+ M +IYE+M G LF + HN ++AVE + ++V
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGL 162
Query: 415 AMAHALAYLHHDCSPSIASTCPDSSNRTLL------------------AGTYGYIAPELA 456
H Y+H D P SN L GT + APE+A
Sbjct: 163 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 457 YTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D++S GV++ +L G P
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 319 GSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
G+VY A + G+ A+++++ + + I NE V+ + + NIV L
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVNYLDSYLVGD 90
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHH--------- 425
++++ EY+ GSL D V +D + + + AL +LH
Sbjct: 91 ELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 426 --------DCSPSI------ASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 471
D S + A P+ S R+ + GT ++APE+ K D++S G
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 472 VVTLEVLMGKHP 483
++ +E++ G+ P
Sbjct: 204 IMAIEMIEGEPP 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 87/227 (38%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDXXXXXXXX 493
+++PE V T DV+SFGVV E+ + + P
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M +LD+ P D+LL + C Q NPK RP+
Sbjct: 238 R--FVMEGGLLDKPDNCP-------DMLL--ELMRMCWQYNPKMRPS 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
+F EA ++ Q+ H+ +V+LY + ++ +++I EYM+ GSL + ++L K
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKL 111
Query: 410 VNIVKAMAHALA------YLHHDCSPS----------------IASTCPDSSNRTLLAGT 447
+++ +A +A Y+H D + +A D+
Sbjct: 112 LDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAK 171
Query: 448 Y--GYIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ + APE T K DV+SFG++ E++
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 31 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 86 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 144
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 474 TLEVL 478
E++
Sbjct: 205 LTEIV 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++ + E + + H N+VK YG +L EY G LF + + E D +
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 409 RVNIVKAMA---HALAYLHHDCSPS----------------IASTCPDSSNRTLL---AG 446
+ + A H + H D P +A+ ++ LL G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 447 TYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
T Y+APE L E DV+S G+V +L G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++ + E + + H N+VK YG +L EY G LF + + E D +
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 409 RVNIVKAMA---HALAYLHHDCSPS----------------IASTCPDSSNRTLL---AG 446
+ + A H + H D P +A+ ++ LL G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 447 TYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
T Y+APE L E DV+S G+V +L G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 87/227 (38%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDXXXXXXXX 493
+++PE V T DV+SFGVV E+ + + P
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M +LD+ P D+LL + C Q NPK RP+
Sbjct: 236 R--FVMEGGLLDKPDNCP-------DMLL--ELMRMCWQYNPKMRPS 271
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 53/273 (19%)
Query: 317 GYGSVYKA-QLPNGKVF----ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYG 371
+G+VYK +P G+ A+K L +ET F +EA +++ + H ++V+L G
Sbjct: 27 AFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLVRLLG 84
Query: 372 FCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAH--ALAYLHH 425
CL + L+ + M G L +H ++D + L+W V I K M + +H
Sbjct: 85 VCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMMYLEERRLVHR 141
Query: 426 D-CSPSIASTCPDSSNRT------LLAGT------------YGYIAPELAYTMVMTEKCD 466
D + ++ P+ T LL G ++A E + T + D
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 467 VYSFGVVTLEVL-MGKHPRDXXXXXXXXXDPKIMLIDVLD--QRLP-PPVDRKVIRDILL 522
V+S+GV E++ G P D P + D+L+ +RLP PP+ D+ +
Sbjct: 202 VWSYGVTIWELMTFGGKPYDGI--------PTREIPDLLEKGERLPQPPI---CTIDVYM 250
Query: 523 ASTISFACLQSNPKSRPTMQYVSQEFLITRKTP 555
+ C + SRP + ++ EF + P
Sbjct: 251 ---VMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 36 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 90
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 91 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 149
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 474 TLEVL 478
E++
Sbjct: 210 LTEIV 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 329 GKVFALKKLH-TSET---EELAFIK-SFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFLI 382
G FA+K + T+E E+L ++ + R E +L QV H +I+ L MFL+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 383 YEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS------ 430
++ M++G LF L + V L + +I++++ A+++LH D P
Sbjct: 179 FDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 431 --------IASTCPDSSNRTL--LAGTYGYIAPE-LAYTMVMT-----EKCDVYSFGVVT 474
+C L L GT GY+APE L +M T ++ D+++ GV+
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 296 FTLLAGSPP 304
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++ + E + + H N+VK YG +L EY G LF + + E D +
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 409 RVNIVKAMA---HALAYLHHDCSPS----------------IASTCPDSSNRTLL---AG 446
+ + A H + H D P +A+ ++ LL G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 447 TYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
T Y+APE L E DV+S G+V +L G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 49/216 (22%)
Query: 301 ERATNNIDVFSIWNYDG----YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQ 356
E T +++ W G +G VYKAQ V A K+ +++EE ++ + E
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEID 59
Query: 357 VLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-----RVN 411
+L+ H NIVKL + ++++ E+ G++ DAV L+ + ++
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELERPLTESQIQ 111
Query: 412 IV-KAMAHALAYLHH------------------------DCSPSIASTCPDSSNRTLLAG 446
+V K AL YLH D S +T R G
Sbjct: 112 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIG 171
Query: 447 TYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
T ++APE+ + K DV+S G+ +E+
Sbjct: 172 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 21 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 75
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H D +
Sbjct: 76 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 134
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 474 TLEVL 478
E++
Sbjct: 195 LTEIV 199
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 38/226 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E VLSQ I + +G L +++I EY+ GS L L+
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIAT 120
Query: 412 IVKAMAHALAYLHHD----------------------CSPSIASTCPDSS-NRTLLAGTY 448
I++ + L YLH + +A D+ R GT
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTP 180
Query: 449 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL 508
++APE+ K D++S G+ +E+ G+ P + ++ ++ +
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP--------MRVLFLIPKNS 232
Query: 509 PPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKT 554
PP ++ + + ACL +P+ RPT + + + ITR T
Sbjct: 233 PPTLEGQHSKPF---KEFVEACLNKDPRFRPTAKELLKHKFITRYT 275
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSL- 391
A+K L TE+ + F EA ++ Q H N+V L G K + ++ E+M+ G+L
Sbjct: 75 AIKTLKVGYTEKQR--RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD 132
Query: 392 -FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHD---------------CSP 429
F H+ + V + V +++ +A + YL H D S
Sbjct: 133 AFLRKHDGQFTV----IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 430 SIASTCPDSSNRTLLAGTYGYI-----APELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
S + + T G I APE T DV+S+G+V EV+ G+ P
Sbjct: 189 FGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 23/160 (14%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++ + E + + + H N+VK YG +L EY G LF + + E D +
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 409 RVNIVKAMA---HALAYLHHDCSPS----------------IASTCPDSSNRTLL---AG 446
+ + A H + H D P +A+ ++ LL G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 447 TYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
T Y+APE L E DV+S G+V +L G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 46/281 (16%)
Query: 299 LEERATNNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQV 357
L E ++ + S G V+K + P+G V A K +H L + RN+
Sbjct: 3 LGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIR 56
Query: 358 LSQVLHR----NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNI 412
QVLH IV YG + + E+M GSL L E K + +
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 413 VKAMAH---ALAYLHHDCSPS----------------IASTCPDSSNRTLLAGTYGYIAP 453
+K + + +H D PS ++ D + GT Y++P
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV-GTRSYMSP 175
Query: 454 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRL--PPP 511
E + + D++S G+ +E+ +G++PR P + + ++LD + PPP
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR-----------PPMAIFELLDYIVNEPPP 224
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
+ + ++ CL NP R ++ + I R
Sbjct: 225 KLPSAVFSLEFQDFVN-KCLIKNPAERADLKQLMVHAFIKR 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HA 419
H N+VK YG +L EY G LF + + E D + + + A H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 420 LAYLHHDCSPS----------------IASTCPDSSNRTLL---AGTYGYIAPE-LAYTM 459
+ H D P +A+ ++ LL GT Y+APE L
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 460 VMTEKCDVYSFGVVTLEVLMGKHPRD 485
E DV+S G+V +L G+ P D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG +++ ++ + L K H + +E SF A ++S++ H+++V YG C+
Sbjct: 35 YGQLHETEV---LLKVLDKAHRNYSE------SFFEAASMMSKLSHKHLVLNYGVCVCGD 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 426
L+ E++K GSL L N++ + + W ++ + K +A A+ +L +
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEEN 132
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 31/193 (16%)
Query: 318 YGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G V+ +L + + A+K + +L F EA++L Q H NIV+L G C +
Sbjct: 127 FGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC---SPSIAS 433
+ ++++ E ++ G L + L + +V A + YL C A
Sbjct: 185 QPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 434 TCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSFG 471
C + L +G + APE + + DV+SFG
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG 302
Query: 472 VVTLEVL-MGKHP 483
++ E +G P
Sbjct: 303 ILLWETFSLGASP 315
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 31/193 (16%)
Query: 318 YGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G V+ +L + + A+K + +L F EA++L Q H NIV+L G C +
Sbjct: 127 FGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC---SPSIAS 433
+ ++++ E ++ G L + L + +V A + YL C A
Sbjct: 185 QPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 434 TCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSFG 471
C + L +G + APE + + DV+SFG
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG 302
Query: 472 VVTLEVL-MGKHP 483
++ E +G P
Sbjct: 303 ILLWETFSLGASP 315
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 54/227 (23%)
Query: 302 RATNNIDVFSIWNYDGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ 360
R ++ + ++ +G V KA+ + + +A+KK+ +E E+L+ I S E +L+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILS---EVMLLAS 58
Query: 361 VLHRNIVKLYGFCLHRK-------------CMFLIYEYMKRGSLFCNLHNNEDAVELD-- 405
+ H+ +V+ Y L R+ +F+ EY + +L+ +H+ + D
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 406 WAKRVNIVKAMA--HALAYLHHDCSPS------------------------------IAS 433
W I++A++ H+ +H D P +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 434 TCPDSS-NRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVL 478
P SS N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 105/281 (37%), Gaps = 44/281 (15%)
Query: 316 DG-YGSVYKAQL--PNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 22 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 82 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 140
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 141 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 201 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 250
Query: 526 ISFACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDIS 566
+ C P+ RPT + L + T + A+QD
Sbjct: 251 VMVQCWAHKPEDRPTFVALRDFLLEAQPTDM---RALQDFE 288
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
YG +++ ++ + L K H + +E SF A ++S++ H+++V YG C
Sbjct: 35 YGQLHETEV---LLKVLDKAHRNYSE------SFFEAASMMSKLSHKHLVLNYGVCFCGD 85
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 426
L+ E++K GSL L N++ + + W ++ + K +A A+ +L +
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEEN 132
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 50/224 (22%)
Query: 294 YKKPKLEERATNNIDVFSIWNYDG------YGSVYKAQLPNGKVFALKKLHTSETEELAF 347
++ K E T +++ W G +G VYKAQ V A K+ +++EE
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
++ + E +L+ H NIVKL + ++++ E+ G++ DAV L+
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELE 129
Query: 408 K-----RVNIV-KAMAHALAYLHH-----------------DCSPSIASTCPDSSN---- 440
+ ++ +V K AL YLH D +A + N
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 441 --RTLLAGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
R GT ++APE+ + K DV+S G+ +E+
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 43/200 (21%)
Query: 326 LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC----MFL 381
L +G +ALK++ E ++ + + EA + H NI++L +CL + +L
Sbjct: 51 LHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107
Query: 382 IYEYMKRGSLFCNLHNNEDAVELDWAKRV-----NIVKAMA--HALAYLHHDCSP----- 429
+ + KRG+L+ + +D ++ I + + HA Y H D P
Sbjct: 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL 167
Query: 430 ------------SIASTC--PDSSNRTLLAG-------TYGYIAPELAYTM---VMTEKC 465
S+ C + S + L T Y APEL V+ E+
Sbjct: 168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERT 227
Query: 466 DVYSFGVVTLEVLMGKHPRD 485
DV+S G V ++ G+ P D
Sbjct: 228 DVWSLGCVLYAMMFGEGPYD 247
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G V+ A+K L AF+ EA ++ Q+ H+ +V+LY + ++
Sbjct: 22 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA-VVTQE 76
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA------YLHHDCSPS- 430
+++I EYM+ GSL + ++L K +++ +A +A Y+H + +
Sbjct: 77 PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAAN 135
Query: 431 ---------------IASTCPDSSNRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVV 473
+A D+ + + APE T K DV+SFG++
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 474 TLEVL 478
E++
Sbjct: 196 LTEIV 200
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 54/271 (19%)
Query: 317 GYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLS-QVLHRNI-----VKL 369
YG V K + +P+G++ A+K++ A + S + ++ + R + V
Sbjct: 63 AYGVVEKMRHVPSGQIMAVKRIR-------ATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 370 YGFCLHRKCMFLIYEYMKRG--SLFCNLHNNEDAVELDWAKR--VNIVKAMAH---ALAY 422
YG +++ E M + + + + D + V+IVKA+ H L+
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 423 LHHDCSPS----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTE--- 463
+H D PS I+ DS +T+ AG Y+APE + +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 464 -KCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILL 522
K D++S G+ +E+ + + P D P L V+++ P ++ D
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSP-----QLPADKFS 284
Query: 523 ASTISFA--CLQSNPKSRPTMQYVSQEFLIT 551
A + F CL+ N K RPT + Q T
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRG-------SLFCNLHNNEDAV 402
F NEA V+ + ++V+L G + +I E M RG SL + NN
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
LAGT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 318 YGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+G V+K + G A K + T ++ +K NE V++Q+ H N+++LY +
Sbjct: 102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYDAFESK 158
Query: 377 KCMFLIYEYMKRGSLFCNLHNNE-DAVELD---WAKRVNIVKAMAHALAYLHHDCSP-SI 431
+ L+ EY+ G LF + + + ELD + K++ H + LH D P +I
Sbjct: 159 NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENI 218
Query: 432 ASTCPDSSNRTLLA-----------------GTYGYIAPELAYTMVMTEKCDVYSFGVVT 474
D+ ++ GT ++APE+ ++ D++S GV+
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 279 YMLLSGLSP 287
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
S NE VL ++ H NIV L ++LI + + G LF + E D ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 410 V----NIVKAMAHALAYLHHDCSP-SIASTCPDSSNRTLLA------------------G 446
+ + VK + H L +H D P ++ D ++ +++ G
Sbjct: 122 IFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GY+APE+ ++ D +S GV+ +L G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 28 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 88 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 146
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 147 LAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASD 206
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 207 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 256
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 257 VMVQCWAHKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 18 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 78 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 136
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 197 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 246
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 247 VMVQCWAHKPEDRPT 261
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 106/283 (37%), Gaps = 38/283 (13%)
Query: 295 KKPKLEERATNNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRN 353
+K K+ E ++ + S G V+K + P+G V A K +H L + RN
Sbjct: 15 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRN 68
Query: 354 EAQVLSQVLHR----NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK- 408
+ QVLH IV YG + + E+M GSL L E K
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 128
Query: 409 RVNIVKAMAH---ALAYLHHDCSPS----------------IASTCPDSSNRTLLAGTYG 449
+ ++K + + +H D PS ++ DS + + GT
Sbjct: 129 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRS 187
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLP 509
Y++PE + + D++S G+ +E+ +G++P + L+D + P
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE----LLDYIVNEPP 243
Query: 510 PPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITR 552
P + V L CL NP R ++ + I R
Sbjct: 244 PKLPSGVFS--LEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
S NE VL ++ H NIV L ++LI + + G LF + E D ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 410 V----NIVKAMAHALAYLHHDCSP-SIASTCPDSSNRTLLA------------------G 446
+ + VK + H L +H D P ++ D ++ +++ G
Sbjct: 122 IFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GY+APE+ ++ D +S GV+ +L G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 50/224 (22%)
Query: 294 YKKPKLEERATNNIDVFSIWNYDG------YGSVYKAQLPNGKVFALKKLHTSETEELAF 347
++ K E T +++ W G +G VYKAQ V A K+ +++EE
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
++ + E +L+ H NIVKL + ++++ E+ G++ DAV L+
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELE 129
Query: 408 K-----RVNIV-KAMAHALAYLHH-----------------DCSPSIASTCPDSSN---- 440
+ ++ +V K AL YLH D +A + N
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 441 --RTLLAGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
R GT ++APE+ + K DV+S G+ +E+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 37 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 96
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 216 YILLCGYPP 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH-------NNEDAV 402
F NEA V+ + ++V+L G + +I E M RG L L NN
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 36 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 95
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 215 YILLCGYPP 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 35 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 94
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 214 YILLCGYPP 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 75 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + I+K++ A+ YLH D P
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 254 YILLCGYPP 262
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
S NE VL ++ H NIV L ++LI + + G LF + E D ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 410 V----NIVKAMAHALAYLHHDCSP-SIASTCPDSSNRTLLA------------------G 446
+ + VK + H L +H D P ++ D ++ +++ G
Sbjct: 122 IFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GY+APE+ ++ D +S GV+ +L G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 45 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 104
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 224 YILLCGYPP 232
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 50/224 (22%)
Query: 294 YKKPKLEERATNNIDVFSIWNYDG------YGSVYKAQLPNGKVFALKKLHTSETEELAF 347
++ K E T +++ W G +G VYKAQ V A K+ +++EE
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
++ + E +L+ H NIVKL + ++++ E+ G++ DAV L+
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELE 129
Query: 408 K-----RVNIV-KAMAHALAYLHH-----------------DCSPSIASTCPDSSN---- 440
+ ++ +V K AL YLH D +A + N
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 441 --RTLLAGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
R GT ++APE+ + K DV+S G+ +E+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E + + H+++V +GF +F++ E +R SL LH A+ A+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ 149
Query: 409 -----------RVNIVKAMAHALAYLHHDCSPSIAS------TCPDSSNRTLLAGTYGYI 451
RV I + + +L+ D I D + +L GT YI
Sbjct: 150 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPP 511
APE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNEYSIPKH 263
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 264 INP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR 409
S NE VL ++ H NIV L ++LI + + G LF + E D ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 410 V----NIVKAMAHALAYLHHDCSP-SIASTCPDSSNRTLLA------------------G 446
+ + VK + H L +H D P ++ D ++ +++ G
Sbjct: 122 IFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 447 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GY+APE+ ++ D +S GV+ +L G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 67/280 (23%)
Query: 317 GYGSVYKAQLP-NGKVFALKKL-HTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL 374
G+G V+KA+ +GK + +K++ + +E E E + L+++ H NIV Y C
Sbjct: 23 GFGQVFKAKHRIDGKTYVIKRVKYNNEKAE--------REVKALAKLDHVNIVH-YNGCW 73
Query: 375 -----------------HRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA 417
KC+F+ E+ +G+L + +LD + + + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQIT 132
Query: 418 HALAYLH------HDCSPS----------------IASTCPDSSNRTLLAGTYGYIAPEL 455
+ Y+H D PS + ++ + R GT Y++PE
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQ 192
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 515
+ ++ D+Y+ G++ E+L H D D+ D + D+K
Sbjct: 193 ISSQDYGKEVDLYALGLILAELL---HVCDTAFETSK------FFTDLRDGIISDIFDKK 243
Query: 516 VIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKTP 555
T+ L P+ RP + + + +K+P
Sbjct: 244 -------EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH-------NNEDAV 402
F NEA V+ + ++V+L G + +I E M RG L L NN
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+K + + +A +AYL H D + A C + + T+ G +G
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
+++PE V T DV+SFGVV E+
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E + + H+++V +GF +F++ E +R SL LH A+ A+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ 147
Query: 409 -----------RVNIVKAMAHALAYLHHDCSPSIAS------TCPDSSNRTLLAGTYGYI 451
RV I + + +L+ D I D + +L GT YI
Sbjct: 148 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 206
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPP 511
APE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNEYSIPKH 261
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 262 INP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 299
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 81 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 140
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + I+K++ A+ YLH D P
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 260 YILLCGYPP 268
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 28 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 88 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 146
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 147 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 206
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 207 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 256
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 257 VMVQCWAHKPEDRPT 271
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 30 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 89
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 209 YILLCGYPP 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 31 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + I+K++ A+ YLH D P
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 210 YILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 29 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 88
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 208 YILLCGYPP 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 29 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 88
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 208 YILLCGYPP 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 52/224 (23%)
Query: 295 KKPKLEERATNNIDVFSIWNYDG------YGSVYKAQ-LPNGKVFALKKLHTSETEELAF 347
+K + E ++D +W G +G VYKA+ G + A K + T EEL
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-- 60
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
+ + E ++L+ H IVKL G H ++++ E+ G++ DA+ L+
Sbjct: 61 -EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV--------DAIMLELD 111
Query: 408 K-----RVNIV-KAMAHALAYLHH-----------------DCSPSIASTCPDSSN---- 440
+ ++ +V + M AL +LH + +A + N
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171
Query: 441 --RTLLAGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
R GT ++APE+ M + K D++S G+ +E+
Sbjct: 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 31 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD++S GV+
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 210 YILLCGYPP 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
+ F+ E +++ + H NI++LY ++L+ E G LF + + E D A
Sbjct: 50 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109
Query: 408 KRV-NIVKAMA--HALAYLHHDCSPS---IASTCPDSSNRTL----------------LA 445
+ + +++ A+A H L H D P + PDS + +
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 169
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT Y++P++ + E CD +S GV+ +L G P
Sbjct: 170 GTPYYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIV 413
E + + H+++V +GF +F++ E +R SL LH A+ A+ +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEAR--YYL 121
Query: 414 KAMAHALAYLH-----------------HDCSPSIAS------TCPDSSNRTLLAGTYGY 450
+ + YLH D I D + +L GT Y
Sbjct: 122 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 451 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPP 510
IAPE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-----LRIKKNEYSIPK 236
Query: 511 PVDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 237 HINP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 18 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 78 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 136
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 197 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 246
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 247 VMVQCWAHKPEDRPT 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 18 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 78 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 136
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 197 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 246
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 247 VMVQCWAHKPEDRPT 261
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 329 GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKR 388
K+ KKL + ++L EA++ + H NIV+L+ +L+++ +
Sbjct: 61 AKIINTKKLSARDHQKL------EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 114
Query: 389 GSLFCNLHNNEDAVELDWAKRVN-IVKAMAHALAY--LHHDCSPS---IASTCPDSSNRT 442
G LF ++ E E D + ++ I++++ H + +H D P +AS C ++ +
Sbjct: 115 GELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 443 L-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
AGT GY++PE+ + D+++ GV+ +L+G P
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 32/214 (14%)
Query: 295 KKPKLEERATNNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRN 353
+K K+ E ++ + S G V+K + P+G V A K +H L + RN
Sbjct: 58 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRN 111
Query: 354 EAQVLSQVLHR----NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK- 408
+ QVLH IV YG + + E+M GSL L E K
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 171
Query: 409 RVNIVKAMAH---ALAYLHHDCSPS----------------IASTCPDSSNRTLLAGTYG 449
+ ++K + + +H D PS ++ DS + + GT
Sbjct: 172 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRS 230
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
Y++PE + + D++S G+ +E+ +G++P
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
+ F+ E +++ + H NI++LY ++L+ E G LF + + E D A
Sbjct: 67 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 126
Query: 408 KRV-NIVKAMA--HALAYLHHDCSPS---IASTCPDSSNRTL----------------LA 445
+ + +++ A+A H L H D P + PDS + +
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 186
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT Y++P++ + E CD +S GV+ +L G P
Sbjct: 187 GTPYYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 316 DG-YGSVYKAQ--LPNGKVF--ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 370
DG +G V + + P+GK A+K L + + F E + + HRN+++LY
Sbjct: 22 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR--VNIVKAMAH--ALAYLHHD 426
G L M ++ E GSL L ++ L R V + + M + + ++H D
Sbjct: 82 GVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 140
Query: 427 CSP----------------SIASTCPDSSNRTLLAGT----YGYIAPELAYTMVMTEKCD 466
+ + P + + ++ + + APE T + D
Sbjct: 141 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 467 VYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAST 525
+ FGV E+ G+ P + ID +RLP P D +DI
Sbjct: 201 TWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQDIY---N 250
Query: 526 ISFACLQSNPKSRPT 540
+ C P+ RPT
Sbjct: 251 VMVQCWAHKPEDRPT 265
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 42/223 (18%)
Query: 298 KLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRN 353
KL+E + + + D +G VYK L P + A+ + E + FR+
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-----HNNEDAVELDWAK 408
EA + +++ H N+V L G + + +I+ Y G L L H++ + + D
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 409 R--------VNIVKAMAHALAYL--HHDCSPSIAST---CPDSSN---------RTLLAG 446
+ V++V +A + YL HH +A+ D N R + A
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 447 TY-----------GYIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
Y ++APE + D++S+GVV EV
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 32/188 (17%)
Query: 325 QLPNGKVFA---LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 381
Q GK +A +KK S + + E +L ++ H NI+ L+ ++ + L
Sbjct: 26 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85
Query: 382 IYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSPS----- 430
I E + G LF L E E D A +K + + YLH D P
Sbjct: 86 ILELVSGGELFDFLAEKESLTE-DEA--TQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 431 ---------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA + + GT ++APE+ + + D++S GV+T
Sbjct: 143 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 202
Query: 476 EVLMGKHP 483
+L G P
Sbjct: 203 ILLSGASP 210
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 52/218 (23%)
Query: 301 ERATNNIDVFSIWNYDG------YGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRN 353
E ++D +W G +G VYKA+ G + A K + T EEL + +
Sbjct: 1 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIV 57
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E ++L+ H IVKL G H ++++ E+ G++ DA+ L+ +
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV--------DAIMLELDRGLTEP 109
Query: 409 RVNIV-KAMAHALAYLHH-----------------DCSPSIASTCPDSSN------RTLL 444
++ +V + M AL +LH + +A + N R
Sbjct: 110 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 169
Query: 445 AGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 477
GT ++APE+ M + K D++S G+ +E+
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 329 GKVFALK-----KLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 383
GK+FA+K L E+ S NE VL ++ H NIV L ++L+
Sbjct: 47 GKLFAVKCIPKKALKGKES-------SIENEIAVLRKIKHENIVALEDIYESPNHLYLVM 99
Query: 384 EYMKRGSLFCNL-----HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIASTCPD 437
+ + G LF + + +DA L ++V H + +H D P ++ D
Sbjct: 100 QLVSGGELFDRIVEKGFYTEKDASTL--IRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD 157
Query: 438 SSNRTLLA------------------GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++ +++ GT GY+APE+ ++ D +S GV+ +L
Sbjct: 158 EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 217
Query: 480 GKHP 483
G P
Sbjct: 218 GYPP 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 32/188 (17%)
Query: 325 QLPNGKVFA---LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 381
Q GK +A +KK S + + E +L ++ H NI+ L+ ++ + L
Sbjct: 33 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 92
Query: 382 IYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSPS----- 430
I E + G LF L E E D A +K + + YLH D P
Sbjct: 93 ILELVSGGELFDFLAEKESLTE-DEA--TQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 431 ---------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA + + GT ++APE+ + + D++S GV+T
Sbjct: 150 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 476 EVLMGKHP 483
+L G P
Sbjct: 210 ILLSGASP 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 37/225 (16%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E + + H+++V +GF +F++ E +R SL LH A+ A+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ 125
Query: 409 -----------RVNIVKAMAHALAYLHHDCSPSIAS------TCPDSSNRTLLAGTYGYI 451
RV I + + +L+ D I D + L GT YI
Sbjct: 126 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPP 511
APE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNEYSIPKH 239
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 240 INP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 32/214 (14%)
Query: 295 KKPKLEERATNNIDVFSIWNYDGYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRN 353
+K K+ E ++ + S G V+K + P+G V A K +H L + RN
Sbjct: 23 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRN 76
Query: 354 EAQVLSQVLHR----NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK- 408
+ QVLH IV YG + + E+M GSL L E K
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 136
Query: 409 RVNIVKAMAH---ALAYLHHDCSPS----------------IASTCPDSSNRTLLAGTYG 449
+ ++K + + +H D PS ++ DS + + GT
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRS 195
Query: 450 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
Y++PE + + D++S G+ +E+ +G++P
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 37/225 (16%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E + + H+++V +GF +F++ E +R SL LH A+ A+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ 129
Query: 409 -----------RVNIVKAMAHALAYLHHDCSPSIAS------TCPDSSNRTLLAGTYGYI 451
RV I + + +L+ D I D + L GT YI
Sbjct: 130 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 188
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPP 511
APE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNEYSIPKH 243
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 244 INP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 37/225 (16%)
Query: 354 EAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK----- 408
E + + H+++V +GF +F++ E +R SL LH A+ A+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ 125
Query: 409 -----------RVNIVKAMAHALAYLHHDCSPSIAS------TCPDSSNRTLLAGTYGYI 451
RV I + + +L+ D I D + L GT YI
Sbjct: 126 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 452 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPP 511
APE+ + + DV+S G + +L+GK P + + I + +P
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNEYSIPKH 239
Query: 512 VDRKVIRDILLASTISFACLQSNPKSRPTM-QYVSQEFLITRKTP 555
++ +A+++ LQ++P +RPT+ + ++ EF + P
Sbjct: 240 INP-------VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 34/189 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 75 NGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPS--- 430
++ E + G LF + + D + I K++ A+ YLH D P
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQA-FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 431 IASTCPD--------------SSNRTLLAGTYG--YIAPELAYTMVMTEKCDVYSFGVVT 474
S P+ +S+ +L Y Y+APE+ + CD +S GV+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIX 253
Query: 475 LEVLMGKHP 483
+L G P
Sbjct: 254 YILLCGYPP 262
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G FA+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G FA+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G FA+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 317 GYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
G V K +L KV A+K L+ + L + R E Q L H +I+KLY
Sbjct: 30 GKVKVGKHELTGHKV-AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP 88
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY------LHHDCSPS 430
+F++ EY+ G LF + N LD + + + + + Y +H D P
Sbjct: 89 SDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPE 145
Query: 431 ----------------IASTCPDSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVV 473
+++ D G+ Y APE ++ + + D++S GV+
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205
Query: 474 TLEVLMGKHPRD 485
+L G P D
Sbjct: 206 LYALLCGTLPFD 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EYM G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSP-------------SIASTCPDSSNRT-LLAGTYGYIAPELAYTMVM 461
H+L ++ D P + RT L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 98
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 159 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 218
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 5 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 64
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 65 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 125 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 98/261 (37%), Gaps = 36/261 (13%)
Query: 319 GSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR----NIVKLYGFC 373
G V+K + P+G V A K +H L + RN+ QVLH IV YG
Sbjct: 20 GVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNIVKAMAH---ALAYLHHDCSP 429
+ + E+M GSL L E K + ++K + + +H D P
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
S ++ DS + + GT Y++PE + + D++S G+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 474 TLEVLMGKHPRDXXXXXXXXXDPKIM--LIDVLDQRLPPPVDRKVIRDILLASTISFACL 531
+E+ +G++P P + L+D + PP + V L CL
Sbjct: 193 LVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS--LEFQDFVNKCL 250
Query: 532 QSNPKSRPTMQYVSQEFLITR 552
NP R ++ + I R
Sbjct: 251 IKNPAERADLKQLMVHAFIKR 271
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 88/241 (36%), Gaps = 50/241 (20%)
Query: 338 HTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH 396
H E E L +E +++S + H NIV L G C H + +I EY G L L
Sbjct: 81 HADEKEALM------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 134
Query: 397 -------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSP-------------- 429
+ ED L+ ++ +A +A+L H D +
Sbjct: 135 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 194
Query: 430 --SIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
+A + SN + ++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 195 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
Query: 484 RDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQY 543
L+ Q P K I I+ AC P RPT Q
Sbjct: 255 YPGILVNSKFYK----LVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQ 304
Query: 544 V 544
+
Sbjct: 305 I 305
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 25/145 (17%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL----HNNEDAVELDWAKRVNIVKAMAH 418
H NIVKL+ + FL+ E + G LF + H +E K V+ V M H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM-H 123
Query: 419 ALAYLHHDCSPSIASTCPDSSNRTLLAGTYG--------------------YIAPELAYT 458
+ +H D P ++ N + +G Y APEL
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
Query: 459 MVMTEKCDVYSFGVVTLEVLMGKHP 483
E CD++S GV+ +L G+ P
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EYM G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSP-------------SIASTCPDSSNRT-LLAGTYGYIAPELAYTMVM 461
H+L ++ D P + RT L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 13 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 72
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 73 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 133 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 192
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 24/220 (10%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNED 400
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 401 AVELD---WAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT-----L 443
E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 98
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 159 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 19 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 78
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 139 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V +VKL ++++ EY+ G +F +L E +A ++ +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 149
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 210 KAVDWWALGVLIYEMAAGYPP 230
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 17/170 (10%)
Query: 328 NGKVFALKKLHTSETEELAFIKS---FRNEAQV---LSQVLH-RNIVKLY-GFCLHRKCM 379
NGKV + T E L ++ R E ++ SQ H IV +Y RKC+
Sbjct: 31 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH------HDCSPSIAS 433
++ E + G LF + + D + + I+K++ A+ YLH D P
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 434 TCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
N L +G+ + CD++S GV+ +L G P
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTGEKY--DKSCDMWSLGVIMYILLCGYPP 197
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 64/248 (25%)
Query: 338 HTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH 396
H E E L +E +++S + H NIV L G C H + +I EY G L L
Sbjct: 89 HADEKEALM------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 397 -------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSP-------------- 429
+ ED L+ ++ +A +A+L H D +
Sbjct: 143 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 202
Query: 430 --SIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
+A + SN + ++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 203 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
Query: 484 RDXXXXXXXXXDPKIM-------LIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPK 536
P I+ L+ Q P K I I+ AC P
Sbjct: 263 Y-----------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPT 305
Query: 537 SRPTMQYV 544
RPT Q +
Sbjct: 306 HRPTFQQI 313
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V +VKL ++++ EY+ G +F +L E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPP 238
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V +VKL ++++ EY+ G +F +L E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V +VKL ++++ EY+ G +F +L E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 325 QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 384
++P G+ +A K ++T + K EA++ + H NIV+L+ +L+++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 385 YMKRGSLFCNLHNNEDAVELDWAKRVN-IVKAMAHAL--AYLHHDCSPS---IASTCPDS 438
+ G LF ++ E E D + + I++++ H +H D P +AS +
Sbjct: 84 LVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGA 143
Query: 439 SNRTL-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ + AGT GY++PE+ + D+++ GV+ +L+G
Sbjct: 144 AVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGY 203
Query: 482 HP 483
P
Sbjct: 204 PP 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 148
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPP 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 176
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPP 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 141
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPP 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 321 VYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 380
V Q K+ KKL + ++L EA++ + H NIV+L+ +
Sbjct: 44 VLAGQEYAAKIINTKKLSARDHQKL------EREARICRLLKHPNIVRLHDSISEEGHHY 97
Query: 381 LIYEYMKRGSLFCNLHNNEDAVELDWAKRVN-IVKAM--AHALAYLHHDCSPS---IAST 434
LI++ + G LF ++ E E D + + I++A+ H + +H D P +AS
Sbjct: 98 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 157
Query: 435 CPDSSNRTL-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 477
++ + AGT GY++PE+ + D+++ GV+ +
Sbjct: 158 LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 217
Query: 478 LMGKHP 483
L+G P
Sbjct: 218 LVGYPP 223
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 325 QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 384
++P G+ +A K ++T + K EA++ + H NIV+L+ +L+++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 385 YMKRGSLFCNLHNNEDAVELDWAKRVN-IVKAMAHAL--AYLHHDCSPS---IASTCPDS 438
+ G LF ++ E E D + + I++++ H +H D P +AS +
Sbjct: 84 LVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGA 143
Query: 439 SNRTL-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ + AGT GY++PE+ + D+++ GV+ +L+G
Sbjct: 144 AVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGY 203
Query: 482 HP 483
P
Sbjct: 204 PP 205
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 323 KAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 382
+ QL KV A+K L+ + L + + E Q L H +I+KLY F++
Sbjct: 31 EHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89
Query: 383 YEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAM--AHALAYLHHDCSP--------- 429
EY+ G LF + + E++ A+R+ I+ A+ H +H D P
Sbjct: 90 MEYVSGGELFDYICKHGRVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM 148
Query: 430 -------SIASTCPDSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+++ D G+ Y APE ++ + + D++S GV+ +L G
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 482 HPRD 485
P D
Sbjct: 209 LPFD 212
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TEE + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEE--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 318 YGSVYKA-QLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA + A+K++ EE + R E +L ++ HRNI++L H
Sbjct: 47 YGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKSVIHHN 105
Query: 377 KCMFLIYEYMK 387
+ LI+EY +
Sbjct: 106 HRLHLIFEYAE 116
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 32/188 (17%)
Query: 325 QLPNGKVFA---LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 381
Q GK +A +KK + + E +L ++ H NI+ L+ ++ + L
Sbjct: 47 QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 106
Query: 382 IYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSPS----- 430
I E + G LF L E E D A +K + + YLH D P
Sbjct: 107 ILELVSGGELFDFLAEKESLTE-DEA--TQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 163
Query: 431 ---------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
IA + + GT ++APE+ + + D++S GV+T
Sbjct: 164 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 223
Query: 476 EVLMGKHP 483
+L G P
Sbjct: 224 ILLSGASP 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH----------- 396
++ +E VL QV H +++KLYG C + LI EY K GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 397 ----------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSN 440
++ D L ++ ++ + YL H D + A +
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLA---ARNILVAEG 186
Query: 441 RTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
R + +G ++A E + + T + DV+SFGV+ E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 479 -MGKHP 483
+G +P
Sbjct: 247 TLGGNP 252
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH----------- 396
++ +E VL QV H +++KLYG C + LI EY K GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 397 ----------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSN 440
++ D L ++ ++ + YL H D + A +
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA---ARNILVAEG 186
Query: 441 RTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
R + +G ++A E + + T + DV+SFGV+ E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 479 -MGKHP 483
+G +P
Sbjct: 247 TLGGNP 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH----------- 396
++ +E VL QV H +++KLYG C + LI EY K GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 397 ----------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSN 440
++ D L ++ ++ + YL H D + A +
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA---ARNILVAEG 186
Query: 441 RTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
R + +G ++A E + + T + DV+SFGV+ E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 479 -MGKHP 483
+G +P
Sbjct: 247 TLGGNP 252
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+KK T + + E +L ++ H N++ L+ ++ + LI E + G LF
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 394 NLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS-------------------- 430
L E E ++ K++ H+L H D P
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A + + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 109/299 (36%), Gaps = 92/299 (30%)
Query: 317 GYGSVYKAQLP-NGKVFALKKL-HTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL 374
G+G V+KA+ +GK + ++++ + +E E E + L+++ H NIV Y C
Sbjct: 24 GFGQVFKAKHRIDGKTYVIRRVKYNNEKAE--------REVKALAKLDHVNIVH-YNGCW 74
Query: 375 H------------------------------RKCMFLIYEYMKRGSLFCNLHNNEDAVEL 404
KC+F+ E+ +G+L E +E
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL-------EQWIEK 127
Query: 405 DWAKRVNIVKAMA------------HALAYLHHDCSPS----------------IASTCP 436
++++ V A+ H+ +H D PS + ++
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 437 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDP 496
+ RT GT Y++PE + ++ D+Y+ G++ E+L H D
Sbjct: 188 NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSK---- 240
Query: 497 KIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPTMQYVSQEFLITRKTP 555
D+ D + D+K T+ L P+ RP + + + +K+P
Sbjct: 241 --FFTDLRDGIISDIFDKK-------EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 290
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 314 NYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
+ +G+VY A+ + N +V A+KK+ S + + E + L ++ H N ++ G
Sbjct: 63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 122
Query: 373 CLHRKCMFLIYEY-MKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH-HDC--- 427
L +L+ EY + S +H L + + LAYLH H+
Sbjct: 123 YLREHTAWLVMEYCLGSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 428 ---SPSIASTCP------DSSNRTLLA------GTYGYIAPELAYTMVMTE---KCDVYS 469
+ +I + P D + +++A GT ++APE+ M + K DV+S
Sbjct: 179 DVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWS 238
Query: 470 FGVVTLEVLMGKHP 483
G+ +E+ K P
Sbjct: 239 LGITCIELAERKPP 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 64 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 392 ---------------FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
F HN E+ +L V+ +A + YL H D +
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 240 VLLWEIFTLGGSP 252
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+APE+ + + D ++ GV+ ++ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V +VKL ++++ EY G +F +L E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 38/168 (22%)
Query: 410 VNIVKAMAH---ALAYLHHDCSPS----------------IASTCPDSSNRTLLAGTYGY 450
V+IVKA+ H L+ +H D PS I+ D + + AG Y
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPY 202
Query: 451 IAPELAYTMVMTE----KCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQ 506
APE + + K D++S G+ +E+ + + P D P L V+++
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGT------PFQQLKQVVEE 256
Query: 507 RLPP-PVDRKVIRDILLASTISFA--CLQSNPKSRPTMQYVSQEFLIT 551
P P D+ A + F CL+ N K RPT + Q T
Sbjct: 257 PSPQLPADK------FSAEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 323 KAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 382
+ QL KV A+K L+ + L + + E Q L H +I+KLY F++
Sbjct: 31 EHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89
Query: 383 YEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAM--AHALAYLHHDCSP--------- 429
EY+ G LF + + E++ A+R+ I+ A+ H +H D P
Sbjct: 90 MEYVSGGELFDYICKHGRVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM 148
Query: 430 -------SIASTCPDSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+++ D G+ Y APE ++ + + D++S GV+ +L G
Sbjct: 149 NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 482 HPRD 485
P D
Sbjct: 209 LPFD 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY+ G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSP-------------SIASTCPDSSNRT-LLAGTYGYIAPELAYTMVM 461
H+L ++ D P + RT L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 314 NYDGYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
+ +G+VY A+ + N +V A+KK+ S + + E + L ++ H N ++ G
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 373 CLHRKCMFLIYEY-MKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH-HDC--- 427
L +L+ EY + S +H L + + LAYLH H+
Sbjct: 84 YLREHTAWLVMEYCLGSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 428 ---SPSIASTCP------DSSNRTLLA------GTYGYIAPELAYTMVMTE---KCDVYS 469
+ +I + P D + +++A GT ++APE+ M + K DV+S
Sbjct: 140 DVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWS 199
Query: 470 FGVVTLEVLMGKHP 483
G+ +E+ K P
Sbjct: 200 LGITCIELAERKPP 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 32/160 (20%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEYMKRGSLFCNLHNNEDAVELD 405
I + E ++L + H NIVK G C + LI E++ GSL L N++ + L
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 126
Query: 406 WAKR--VNIVKAMAH--ALAYLHHDCSPSIASTCPDSSNRTLLAGTYG------------ 449
+ V I K M + + Y+H D + A S + G +G
Sbjct: 127 QQLKYAVQICKGMDYLGSRQYVHRDLA---ARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 450 -----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ APE DV+SFGV E+L
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 319 GSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR----NIVKLYGFC 373
G V+K + P+G V A K +H L + RN+ QVLH IV YG
Sbjct: 20 GVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNIVKAMAH---ALAYLHHDCSP 429
+ + E+M GSL L E K + ++K + + +H D P
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
S ++ DS + + GT Y++PE + + D++S G+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 474 TLEVLMGKHP 483
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 32/160 (20%)
Query: 348 IKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEYMKRGSLFCNLHNNEDAVELD 405
I + E ++L + H NIVK G C + LI E++ GSL L N++ + L
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 114
Query: 406 WAKR--VNIVKAMAH--ALAYLHHDCSPSIASTCPDSSNRTLLAGTYG------------ 449
+ V I K M + + Y+H D + A S + G +G
Sbjct: 115 QQLKYAVQICKGMDYLGSRQYVHRDLA---ARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 450 -----------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ APE DV+SFGV E+L
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 43/207 (20%)
Query: 317 GYGSVYKAQ----LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYG 371
G G+ K Q L NGK +A+K + + + FR E + L Q ++NI++L
Sbjct: 22 GEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FR-EVETLYQCQGNKNILELIE 78
Query: 372 FCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKA---MAHALAYLHHDCS 428
F +L++E ++ GS+ ++ + E + ++ V V A H H D
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 429 P-SIASTCPD--------------------------SSNRTLLAGTYGYIAPELAYTMV- 460
P +I P+ + T G+ Y+APE+
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 461 ----MTEKCDVYSFGVVTLEVLMGKHP 483
++CD++S GVV +L G P
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 319 GSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR----NIVKLYGFC 373
G V+K + P+G V A K +H L + RN+ QVLH IV YG
Sbjct: 20 GVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNIVKAMAH---ALAYLHHDCSP 429
+ + E+M GSL L E K + ++K + + +H D P
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
S ++ DS + + GT Y++PE + + D++S G+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 474 TLEVLMGKHP 483
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 319 GSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR----NIVKLYGFC 373
G V+K + P+G V A K +H L + RN+ QVLH IV YG
Sbjct: 20 GVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNIVKAMAH---ALAYLHHDCSP 429
+ + E+M GSL L E K + ++K + + +H D P
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
S ++ DS + + GT Y++PE + + D++S G+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 474 TLEVLMGKHP 483
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 319 GSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR----NIVKLYGFC 373
G V+K + P+G V A K +H L + RN+ QVLH IV YG
Sbjct: 20 GVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK-RVNIVKAMAH---ALAYLHHDCSP 429
+ + E+M GSL L E K + ++K + + +H D P
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
S ++ DS + + GT Y++PE + + D++S G+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 474 TLEVLMGKHP 483
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXX 493
++APE V T D++SFGVV E+ + + P
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M LDQ P +V + + C Q NPK RPT
Sbjct: 243 K--FVMDGGYLDQ--PDNCPERV-------TDLMRMCWQFNPKMRPT 278
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 56/272 (20%)
Query: 317 GYGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLS-QVLHRNI-----VKL 369
YG V K + +P+G++ A+K++ A + S + ++ + R + V
Sbjct: 19 AYGVVEKMRHVPSGQIMAVKRIR-------ATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 370 YGFCLHRKCMFLIYEYMKRG--SLFCNLHNNEDAVELDWAKR--VNIVKAMAH---ALAY 422
YG +++ E M + + + + D + V+IVKA+ H L+
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 423 LHHDCSPS----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTE--- 463
+H D PS I+ D + + AG Y+APE + +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 464 -KCDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPP-PVDRKVIRDIL 521
K D++S G+ +E+ + + P D P L V+++ P P D+
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQLPADK------F 239
Query: 522 LASTISFA--CLQSNPKSRPTMQYVSQEFLIT 551
A + F CL+ N K RPT + Q T
Sbjct: 240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXX 493
++APE V T D++SFGVV E+ + + P
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M LDQ P +V + + C Q NPK RPT
Sbjct: 240 K--FVMDGGYLDQ--PDNCPERV-------TDLMRMCWQFNPKMRPT 275
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXX 493
++APE V T D++SFGVV E+ + + P
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M LDQ P +V + + C Q NPK RPT
Sbjct: 243 K--FVMDGGYLDQ--PDNCPERV-------TDLMRMCWQFNPKMRPT 278
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXX 493
++APE V T D++SFGVV E+ + + P
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M LDQ P +V + + C Q NPK RPT
Sbjct: 243 K--FVMDGGYLDQ--PDNCPERV-------TDLMRMCWQFNPKMRPT 278
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 107/290 (36%), Gaps = 36/290 (12%)
Query: 222 KNLT--WLDLSNNNIKGSIPVRLSPNKGLCGGNFLDLPSCDTTKPATLFVEIFL---PLA 276
+NLT +L + ++ +P +L N C P D + T +L P A
Sbjct: 103 RNLTQNFLSHTGPDLIPEVPRQLVTN---CTQRLEQGPCKDLFQELTRLTHEYLSVAPFA 159
Query: 277 IVLSVIVFACLLLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL-PNGKVFALK 335
L I F L K ++P N + + G+G V Q+ GK++A K
Sbjct: 160 DYLDSIYFNRFLQWKWLERQPV----TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACK 215
Query: 336 KLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL 395
KL ++ NE Q+L +V R +V L + + L+ M G L ++
Sbjct: 216 KLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 396 HNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSPS----------------IAS 433
++ A A+ V + L LH D P +A
Sbjct: 276 YHMGQAG-FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 434 TCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
P+ GT GY+APE+ T D ++ G + E++ G+ P
Sbjct: 335 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 117 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 231
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 292 GVLMWEIFTLGGSP 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 58 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLT---A 172
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 233 GVLMWEIFTLGGSP 246
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 105 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 220
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 281 VLLWEIFTLGGSP 293
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 60 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 174
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 235 GVLMWEIFTLGGSP 248
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 63 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 177
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 238 GVLMWEIFTLGGSP 251
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT Y+AP + + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 77/194 (39%), Gaps = 27/194 (13%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A+K + ++ + K FR E ++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNL--HNNEDAVELDWAKRVNIVKAMA--HALAYLHHDCS 428
K ++L+ EY G +F L H E AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-RAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 429 PSIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFG 471
D + + G T+G Y APEL + DV+S G
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 472 VVTLEVLMGKHPRD 485
V+ ++ G P D
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLS--QVLHRNIVKLYGFCLH 375
+G V+KAQL N V A+K + + S++NE +V S + H NI++ G
Sbjct: 37 FGCVWKAQLLNEYV-AVKIFPIQDKQ------SWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 376 RKC----MFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 431
++LI + ++GSL L N + W + +I + MA LAYLH D
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 432 ASTCPDSSNRTL 443
P S+R +
Sbjct: 146 DGHKPAISHRDI 157
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 90/252 (35%), Gaps = 68/252 (26%)
Query: 338 HTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH 396
H E E L +E +++S + H NIV L G C H + +I EY G L L
Sbjct: 89 HADEKEALM------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 397 NNEDAVELDWAKRV-----------NIVKAMAHALAYL------HHDCSP---------- 429
+E D A + + +A +A+L H D +
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 202
Query: 430 ------SIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-M 479
+A + SN + ++APE + V T + DV+S+G++ E+ +
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 480 GKHPRDXXXXXXXXXDPKIM-------LIDVLDQRLPPPVDRKVIRDILLASTISFACLQ 532
G +P P I+ L+ Q P K I I+ AC
Sbjct: 263 GLNPY-----------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ------ACWA 305
Query: 533 SNPKSRPTMQYV 544
P RPT Q +
Sbjct: 306 LEPTHRPTFQQI 317
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDXXXXXXXX 493
++APE V T D++SFGVV E+ + + P
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
Query: 494 XDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQSNPKSRPT 540
+M LDQ P +V + + C Q NPK RPT
Sbjct: 242 K--FVMDGGYLDQ--PDNCPERV-------TDLMRMCWQFNPKMRPT 277
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 42/191 (21%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 64 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 392 -------------FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
+C ++ +L V+ +A + YL H D +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 181
Query: 433 STCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFGVV 473
D+ + G T G ++APE + + T + DV+SFGV+
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 474 TLEVL-MGKHP 483
E+ +G P
Sbjct: 242 LWEIFTLGGSP 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 56 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 171
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 232 VLLWEIFTLGGSP 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 90/252 (35%), Gaps = 68/252 (26%)
Query: 338 HTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH 396
H E E L +E +++S + H NIV L G C H + +I EY G L L
Sbjct: 89 HADEKEALM------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 397 NNEDAVELDWAKRV-----------NIVKAMAHALAYL------HHDCSP---------- 429
+E D A + + +A +A+L H D +
Sbjct: 143 RKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 202
Query: 430 ------SIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-M 479
+A + SN + ++APE + V T + DV+S+G++ E+ +
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 480 GKHPRDXXXXXXXXXDPKIM-------LIDVLDQRLPPPVDRKVIRDILLASTISFACLQ 532
G +P P I+ L+ Q P K I I+ AC
Sbjct: 263 GLNPY-----------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ------ACWA 305
Query: 533 SNPKSRPTMQYV 544
P RPT Q +
Sbjct: 306 LEPTHRPTFQQI 317
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 64 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 240 VLLWEIFTLGGSP 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 53 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 168
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 229 VLLWEIFTLGGSP 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 21/201 (10%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVNIVKAM 416
V + KL ++++ EY G +F +L E +A ++ +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 417 AHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVMT 462
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 463 EKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPP 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 53/196 (27%)
Query: 335 KKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
+K +SE E L +E ++++Q+ H NIV L G C ++LI+EY G L
Sbjct: 85 EKADSSEREALM------SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN 138
Query: 394 NLHN-----NEDAVELDWAKRVN---------------IVKAMAHALAYL------HHD- 426
L + +ED +E + KR+ +A + +L H D
Sbjct: 139 YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198
Query: 427 ---------------CSPSIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVY 468
C +A SN + ++APE + + T K DV+
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 258
Query: 469 SFGVVTLEVL-MGKHP 483
S+G++ E+ +G +P
Sbjct: 259 SYGILLWEIFSLGVNP 274
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 64 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 240 VLLWEIFTLGGSP 252
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 57 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 392 FCNL---------------HNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPS 430
L HN E+ +L V+ +A + YL H D +
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEE--QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 172
Query: 431 IASTCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFG 471
D+ + G T G ++APE + + T + DV+SFG
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 472 VVTLEVL-MGKHP 483
V+ E+ +G P
Sbjct: 233 VLLWEIFTLGGSP 245
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 44/288 (15%)
Query: 310 FSIWNYDGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVK 368
F + G+G V+ Q+ GK++A KKL+ ++ + E ++L++V R IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 369 LYGFCLHRKCMFLIYEYMKRGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHH-- 425
L + + L+ M G + +++N +ED + + + L +LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 426 ----DCSPSIASTCPDSSNR-----------------TLLAGTYGYIAPELAYTMVMTEK 464
D P D + R AGT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 465 CDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAS 524
D ++ GV E++ + P + K + VL+Q + P D +
Sbjct: 370 VDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-------DKFSPA 419
Query: 525 TISF--ACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDISISEL 570
+ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 42/191 (21%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L + TE+ + +E +++ + H+NI+ L G C +++I EY +G+L
Sbjct: 49 AVKMLKSDATEK--DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 392 -------------FCNLHNNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
+C ++ +L V+ +A + YL H D +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 166
Query: 433 STCPDSSNRTLLAG--------------TYG-----YIAPELAYTMVMTEKCDVYSFGVV 473
D+ + G T G ++APE + + T + DV+SFGV+
Sbjct: 167 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 226
Query: 474 TLEVL-MGKHP 483
E+ +G P
Sbjct: 227 LWEIFTLGGSP 237
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 44/288 (15%)
Query: 310 FSIWNYDGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVK 368
F + G+G V+ Q+ GK++A KKL+ ++ + E ++L++V R IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 369 LYGFCLHRKCMFLIYEYMKRGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHH-- 425
L + + L+ M G + +++N +ED + + + L +LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 426 ----DCSPSIASTCPDSSNR-----------------TLLAGTYGYIAPELAYTMVMTEK 464
D P D + R AGT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 465 CDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAS 524
D ++ GV E++ + P + K + VL+Q + P D +
Sbjct: 370 VDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-------DKFSPA 419
Query: 525 TISF--ACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDISISEL 570
+ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 44/288 (15%)
Query: 310 FSIWNYDGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVK 368
F + G+G V+ Q+ GK++A KKL+ ++ + E ++L++V R IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 369 LYGFCLHRKCMFLIYEYMKRGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHH-- 425
L + + L+ M G + +++N +ED + + + L +LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 426 ----DCSPSIASTCPDSSNR-----------------TLLAGTYGYIAPELAYTMVMTEK 464
D P D + R AGT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 465 CDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAS 524
D ++ GV E++ + P + K + VL+Q + P D +
Sbjct: 370 VDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-------DKFSPA 419
Query: 525 TISF--ACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDISISEL 570
+ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 43/174 (24%)
Query: 349 KSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
+ FR E ++L Q HRN+++L F +L++E M+ GS+ ++H EL+ +
Sbjct: 56 RVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 408 KRVNIVKAMAHALAYLHH------DCSPS-------------------------IASTCP 436
+V+ +A AL +LH+ D P + C
Sbjct: 115 V---VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 437 DSSNRTLLA--GTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHP 483
S LL G+ Y+APE+ + ++CD++S GV+ +L G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 43/174 (24%)
Query: 349 KSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWA 407
+ FR E ++L Q HRN+++L F +L++E M+ GS+ ++H EL+ +
Sbjct: 56 RVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 408 KRVNIVKAMAHALAYLHH------DCSPS-------------------------IASTCP 436
+V+ +A AL +LH+ D P + C
Sbjct: 115 V---VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 437 DSSNRTLLA--GTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHP 483
S LL G+ Y+APE+ + ++CD++S GV+ +L G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V + KL ++++ EY G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V + KL ++++ EY G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSPS---------IASTCPDSSNRT-----LLAGTYGYIAPELAYTMVM 461
H+L ++ D P I T + R L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 44/288 (15%)
Query: 310 FSIWNYDGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVK 368
F + G+G V+ Q+ GK++A KKL+ ++ + E ++L++V R IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 369 LYGFCLHRKCMFLIYEYMKRGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHH-- 425
L + + L+ M G + +++N +ED + + + L +LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 426 ----DCSPSIASTCPDSSNR-----------------TLLAGTYGYIAPELAYTMVMTEK 464
D P D + R AGT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 465 CDVYSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLAS 524
D ++ GV E++ + P + K + VL+Q + P D +
Sbjct: 370 VDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-------DKFSPA 419
Query: 525 TISF--ACLQSNPKSRPTMQYVSQEFLITRKTPLVKHAAIQDISISEL 570
+ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 42/219 (19%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKV---FALKKLHTSETEELAFIKSFRNEAQVLSQV 361
N+I + +G V KA++ + A+K++ +++ + F E +VL ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKL 72
Query: 362 LHR-NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN-------------NEDAVELDWA 407
H NI+ L G C HR ++L EY G+L L N A L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 408 KRVNIVKAMAHALAYL------HHDCS-----------PSIASTCPDSSNRTLLAGTYG- 449
+ ++ +A + YL H D + IA + T G
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 450 ----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
++A E V T DV+S+GV+ E++ +G P
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 42/219 (19%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKV---FALKKLHTSETEELAFIKSFRNEAQVLSQV 361
N+I + +G V KA++ + A+K++ +++ + F E +VL ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKL 82
Query: 362 LHR-NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN-------------NEDAVELDWA 407
H NI+ L G C HR ++L EY G+L L N A L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 408 KRVNIVKAMAHALAYL------HHDCS-----------PSIASTCPDSSNRTLLAGTYG- 449
+ ++ +A + YL H D + IA + T G
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 450 ----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 483
++A E V T DV+S+GV+ E++ +G P
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L G+ A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV 82
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++LI EY G +F L + E + +K IV A+ H +H D
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 142
Query: 430 SIASTCPDS---------SNRTLLAGTYG-------YIAPELAYTMVMTE-KCDVYSFGV 472
D SN + G Y APEL + DV+S GV
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 203 ILYTLVSGSLPFD 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L G+ A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 21 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV 79
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++LI EY G +F L + E + +K IV A+ H +H D
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 139
Query: 430 SIASTCPDS---------SNRTLLAGTYG-------YIAPELAYTMVMTE-KCDVYSFGV 472
D SN + G Y APEL + DV+S GV
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 200 ILYTLVSGSLPFD 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H D + A C + + T+ G +G
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
++APE V T D++SFGVV E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A++ + ++ + K FR E +++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A++ + ++ + K FR E +++ + H NIVKL+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 81
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 26/221 (11%)
Query: 288 LLAKRK---YKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTS 340
LAK K KK + + T +D F G GS + L +G +A+K L
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 341 ETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN--- 397
+ +L I+ NE ++L V +VKL ++++ EY+ G +F +L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 398 -NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---------IASTCPDSSNRT----- 442
+E +A ++ + H+L ++ D P I T + R
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 443 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
L GT +APE+ + + D ++ GV+ E+ G P
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKV---FALKKLHTSETEELAFIKSFRNEAQVLSQV 361
N+I + +G V KA++ + A+K++ +++ + F E +VL ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKL 79
Query: 362 LHR-NIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
H NI+ L G C HR ++L EY G+L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 86/233 (36%), Gaps = 28/233 (12%)
Query: 274 PLAIVLSVIVFACLLLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQL-PNGKVF 332
P A L I F L K ++P N + + G+G V Q+ GK++
Sbjct: 157 PFADYLDSIYFNRFLQWKWLERQPV----TKNTFRQYRVLGKGGFGEVCACQVRATGKMY 212
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLF 392
A KKL ++ NE Q+L +V R +V L + + L+ M G L
Sbjct: 213 ACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 272
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH------DCSPS---------------- 430
++++ A A+ V + L LH D P
Sbjct: 273 FHIYHMGQAG-FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+A P+ GT GY+APE+ T D ++ G + E++ G+ P
Sbjct: 332 LAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 98/271 (36%), Gaps = 70/271 (25%)
Query: 318 YGSVYKAQLPNGKVFALK------KLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYG 371
+GSV + L +LK KL S E I+ F +EA + H N+++L G
Sbjct: 47 FGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE---IEEFLSEAACMKDFSHPNVIRLLG 103
Query: 372 FCLHRKCM-----FLIYEYMKRGS-----LFCNLHNNEDAVELDWAKR--VNIVKAMAHA 419
C+ +I +MK G L+ L + L + V+I M +
Sbjct: 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163
Query: 420 --LAYLHHDCSPSIASTCPDSSNRTLLAGTYG----------------------YIAPEL 455
+LH D + A C + T+ +G +IA E
Sbjct: 164 SNRNFLHRDLA---ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 220
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDXXXXXXXXXDPKIMLIDVLD-----QRLP 509
V T K DV++FGV E+ G P P + ++ D RL
Sbjct: 221 LADRVYTSKSDVWAFGVTMWEIATRGMTPY-----------PGVQNHEMYDYLLHGHRLK 269
Query: 510 PPVDRKVIRDILLASTISFACLQSNPKSRPT 540
P D D L I ++C +++P RPT
Sbjct: 270 QPED---CLDELYE--IMYSCWRTDPLDRPT 295
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L GK A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV 74
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 134
Query: 430 SIASTCPDSSNRTLLAG-----TYG-----------YIAPELAYTMVMTE-KCDVYSFGV 472
D + + G T+G Y APEL + DV+S GV
Sbjct: 135 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 195 ILYTLVSGSLPFD 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 78 NKLYLVFEFLHQ 89
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 25/193 (12%)
Query: 317 GYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G G+ K +L G+ A+K + ++ + K FR E +++ + H NIVKL+
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV 82
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD-WAKRVNIVKAMA--HALAYLHHDCSP 429
K ++L+ EY G +F L + E + AK IV A+ H +H D
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKA 142
Query: 430 S----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTE-KCDVYSFGV 472
++ + G+ Y APEL + DV+S GV
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 473 VTLEVLMGKHPRD 485
+ ++ G P D
Sbjct: 203 ILYTLVSGSLPFD 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
+G VY + L + ++L K+F+ E Q H N+V G C+
Sbjct: 46 FGQVYHGRWHGEVAIRLIDIERDNEDQL---KAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 378 CMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAMA--HALAYLHHD 426
+ +I K +L+ + + + ++++ +++ IVK M HA LH D
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD 155
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 18 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 77 NKLYLVFEFLHQ 88
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYM 386
++L++E++
Sbjct: 78 NKLYLVFEFL 87
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 18 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 77 NKLYLVFEFLHQ 88
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 23 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 81
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 82 NKLYLVFEFLHQ 93
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 20 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 78
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 79 NKLYLVFEFLHQ 90
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 23 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 81
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 82 NKLYLVFEFLHQ 93
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 78 NKLYLVFEFLHQ 89
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 20 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 78
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 79 NKLYLVFEFLHQ 90
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 78 NKLYLVFEFLHQ 89
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 18 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 77 NKLYLVFEFLHQ 88
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 17 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 76 NKLYLVFEFLHQ 87
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 17 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 76 NKLYLVFEFLHQ 87
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 18 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 377 KCMFLIYEYM 386
++L++E++
Sbjct: 77 NKLYLVFEFL 86
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEFLHQ 85
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEFLHQ 85
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 17 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 76 NKLYLVFEFLHQ 87
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYM 386
++L++E++
Sbjct: 78 NKLYLVFEFL 87
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 17 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 377 KCMFLIYEYM 386
++L++E++
Sbjct: 76 NKLYLVFEFL 85
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEFLHQ 85
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEFLHQ 85
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 17 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 76 NKLYLVFEFLHQ 87
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 319 GSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 378
G Y A + N KKL + ++L EA++ + H NIV+L+
Sbjct: 36 GQEYAAMIIN-----TKKLSARDHQKL------EREARICRLLKHPNIVRLHDSISEEGH 84
Query: 379 MFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN-IVKAM--AHALAYLHHDCSPS---IA 432
+LI++ + G LF ++ E E D + + I++A+ H + +H + P +A
Sbjct: 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLA 144
Query: 433 STCPDSSNRTL-----------------LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 475
S ++ + AGT GY++PE+ + D+++ GV+
Sbjct: 145 SKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 204
Query: 476 EVLMGKHP 483
+L+G P
Sbjct: 205 ILLVGYPP 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 61 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 120
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALA--YLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 121 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 178
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 179 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 237
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 238 VWSFGVLLWELMTRGAP 254
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
+ E +L+ HRNI+ L+ + + +I+E++ +F + N A EL+ + V+
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVS 106
Query: 412 IVKAMAHALAYLHH------DCSPS--IASTCPDSS----------------NRTLLAGT 447
V + AL +LH D P I T S+ N LL
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 448 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
Y APE+ V++ D++S G + +L G +P
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 42 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 101
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 102 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 159
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 160 -ARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSD 218
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 219 VWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 62 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 121
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 122 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 179
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 180 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 238
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 239 VWSFGVLLWELMTRGAP 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 91/261 (34%), Gaps = 77/261 (29%)
Query: 338 HTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLH 396
H E E L +E +++S + H NIV L G C H + +I EY G L L
Sbjct: 74 HADEKEALM------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 397 --------------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSP- 429
+ ED L+ ++ +A +A+L H D +
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 187
Query: 430 ---------------SIASTCPDSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFG 471
+A + SN + ++APE + V T + DV+S+G
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 247
Query: 472 VVTLEVL-MGKHPRDXXXXXXXXXDPKIM-------LIDVLDQRLPPPVDRKVIRDILLA 523
++ E+ +G +P P I+ L+ Q P K I I+
Sbjct: 248 ILLWEIFSLGLNPY-----------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ- 295
Query: 524 STISFACLQSNPKSRPTMQYV 544
AC P RPT Q +
Sbjct: 296 -----ACWALEPTHRPTFQQI 311
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 35 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 94
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALA--YLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 95 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 152
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 153 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 211
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 212 VWSFGVLLWELMTRGAP 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 45/196 (22%)
Query: 318 YGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG V+K + G++ A+KK SE + + + R E ++L Q+ H N+V L +
Sbjct: 16 YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLEVFRRK 74
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKR---VNIVKAMA----------HALAYL 423
+ + L++EY L ELD +R ++VK++ H +
Sbjct: 75 RRLHLVFEYCDHTVLH----------ELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 424 HHDCSP--------SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEK----------- 464
H D P S+ C D LL G Y E+A + +
Sbjct: 125 HRDVKPENILITKHSVIKLC-DFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 465 CDVYSFGVVTLEVLMG 480
DV++ G V E+L G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKK-LHTSETEELA---FIKSFRNEAQVL 358
T N+ S+ DGY V K + G K+ +H + E A KS R+ ++ +
Sbjct: 14 GTENLYFQSMVFSDGY--VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI 71
Query: 359 SQVL----HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVK 414
+L H NI+ L K ++L+ E M+ G L + + E + + ++ +
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 415 AMA---HALAYLHHDCSPSIASTCPDSSN------------RTLLAG---------TYGY 450
H+ +H D PS +S N + L A T +
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF 191
Query: 451 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+APE+ E CD++S G++ +L G P
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 78 NKLYLVFEHVDQ 89
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V ALKK+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEHVHQ 85
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 23/202 (11%)
Query: 304 TNNIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLS 359
T ++D F G GS + L G +A+K L + +L I+ NE ++
Sbjct: 38 TAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQ 97
Query: 360 QVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKA 415
V +VKL ++++ EY G +F +L +E +A ++ +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 416 MAHALAYLHHDCSP-------------SIASTCPDSSNRT-LLAGTYGYIAPELAYTMVM 461
H+L ++ D P + RT L GT Y+APE+ +
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 462 TEKCDVYSFGVVTLEVLMGKHP 483
+ D ++ GV+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 37/196 (18%)
Query: 317 GYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR-----NIVKLY 370
G+ Y+ + +VFA K + S +K + E +H+ ++V +
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKS-----MLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH----- 425
GF ++++ E +R SL LH AV A+ ++ + YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNNRVIH 165
Query: 426 ------------DCSPSIASTCP------DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 467
D I D + L GT YIAPE+ + + D+
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 468 YSFGVVTLEVLMGKHP 483
+S G + +L+GK P
Sbjct: 226 WSLGCILYTLLVGKPP 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 40 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 99
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 100 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 157
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 158 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 216
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 217 VWSFGVLLWELMTRGAP 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 37/196 (18%)
Query: 317 GYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR-----NIVKLY 370
G+ Y+ + +VFA K + S +K + E +H+ ++V +
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKS-----MLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH----- 425
GF ++++ E +R SL LH AV A+ ++ + YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNNRVIH 165
Query: 426 ------------DCSPSIASTCP------DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 467
D I D + L GT YIAPE+ + + D+
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 468 YSFGVVTLEVLMGKHP 483
+S G + +L+GK P
Sbjct: 226 WSLGCILYTLLVGKPP 241
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 160
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 161 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + + L T Y APE+ + ++ CDV+S G + +E +G
Sbjct: 180 DFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT YIAPE+ D +SFGV+ E+L+G+ P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 41 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 100
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 101 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 158
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 159 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 217
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 218 VWSFGVLLWELMTRGAP 234
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPN-GKVFALKKLHTSETEELAFIKSFRNEA--QVLS 359
AT+ + + YG+VYKA+ P+ G ALK + EE I + R A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 QVLHRNIVKLYGFC 373
H N+V+L C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I Y +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
GT YIAPE+ D +SFGV+ E+L+G+ P
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPN-GKVFALKKLHTSETEELAFIKSFRNEA--QVLS 359
AT+ + + YG+VYKA+ P+ G ALK + EE I + R A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 QVLHRNIVKLYGFC 373
H N+V+L C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 24/144 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN-NEDAVELDWAKRVNIVKAMAH 418
H NIV+ L + ++ EY G LF CN +ED + + ++ V + AH
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYAH 132
Query: 419 ALAYLHHDC---------SPSIASTCPD---------SSNRTLLAGTYGYIAPELAYTMV 460
A+ H D SP+ D S GT YIAPE+
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE 192
Query: 461 MTEK-CDVYSFGVVTLEVLMGKHP 483
K DV+S GV +L+G +P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPN-GKVFALKKLHTSETEELAFIKSFRNEA--QVLS 359
AT+ + + YG+VYKA+ P+ G ALK + EE I + R A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 QVLHRNIVKLYGFC 373
H N+V+L C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 353 NEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
E +L +V H NI++L FL+++ MK+G LF L + V L +
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRK 115
Query: 412 IVKAM------AHALAYLHHDCSPS--------------IASTCPDSSNRTL--LAGTYG 449
I++A+ H L +H D P +C L + GT
Sbjct: 116 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 175
Query: 450 YIAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 483
Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 318 YGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG+V+KA+ ++ ALK++ + +E + R E +L ++ H+NIV+L+
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSD 73
Query: 377 KCMFLIYEYMKRG-SLFCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDCSPS 430
K + L++E+ + + + N + E+ + ++K + H+ LH D P
Sbjct: 74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 318 YGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG+V+KA+ ++ ALK++ + +E + R E +L ++ H+NIV+L+
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSD 73
Query: 377 KCMFLIYEYMKRG-SLFCNLHNNEDAVELDWAKRVNIVKAMA--HALAYLHHDCSPS 430
K + L++E+ + + + N + E+ + ++K + H+ LH D P
Sbjct: 74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 48/194 (24%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEYMKRGSL 391
A+K L TE+ + +E +++ + H+NI+ L G C +++I Y +G+L
Sbjct: 71 AVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 392 FCNLH-------------NNEDAVELDWAKRVNIVKAMAHALAYL------HHDCSPSIA 432
L N ++ + V+ +A + YL H D + A
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---A 185
Query: 433 STCPDSSNRTLLAGTYG----------------------YIAPELAYTMVMTEKCDVYSF 470
+ N + +G ++APE + V T + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 471 GVVTLEVL-MGKHP 483
GV+ E+ +G P
Sbjct: 246 GVLMWEIFTLGGSP 259
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 42 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 101
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 102 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 159
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 160 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 218
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 219 VWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 160
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 161 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 38 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 97
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + + ++H D +
Sbjct: 98 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA-- 155
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 156 -ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 215 VWSFGVLLWELMTRGAP 231
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 37/196 (18%)
Query: 317 GYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR-----NIVKLY 370
G+ Y+ + +VFA K + S +K + E +H+ ++V +
Sbjct: 38 GFAKCYEITDMDTKEVFAGKVVPKS-----MLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH----- 425
GF ++++ E +R SL LH AV A+ ++ + YLH+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNNRVIH 149
Query: 426 ------------DCSPSIASTCP------DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 467
D I D + L GT YIAPE+ + + D+
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDI 209
Query: 468 YSFGVVTLEVLMGKHP 483
+S G + +L+GK P
Sbjct: 210 WSLGCILYTLLVGKPP 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 35/208 (16%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPN-GKVFALK-----KLHTSETEELAFIKSFRNEAQVL 358
N+ V I G+G VY + + GK++A+K ++ + E LA NE +L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIML 242
Query: 359 SQVLHRN----IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVN 411
S V + + Y F K F++ + M G L +L + E D +A +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 412 IVKAMAHALAYLHHDCSPS--------------IASTCPDSSNRTLLA-GTYGYIAPE-L 455
+ H ++ D P+ + C S + + GT+GY+APE L
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 361
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D +S G + ++L G P
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 35/208 (16%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPN-GKVFALK-----KLHTSETEELAFIKSFRNEAQVL 358
N+ V I G+G VY + + GK++A+K ++ + E LA NE +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIML 243
Query: 359 SQVLHRN----IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVN 411
S V + + Y F K F++ + M G L +L + E D +A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 412 IVKAMAHALAYLHHDCSPS--------------IASTCPDSSNRTLLA-GTYGYIAPE-L 455
+ H ++ D P+ + C S + + GT+GY+APE L
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D +S G + ++L G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 353 NEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
E +L +V H NI++L FL+++ MK+G LF L + V L +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRK 128
Query: 412 IVKAM------AHALAYLHHDCSPS--------------IASTCPDSSNRTL--LAGTYG 449
I++A+ H L +H D P +C L + GT
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS 188
Query: 450 YIAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 483
Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 35/208 (16%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPN-GKVFALK-----KLHTSETEELAFIKSFRNEAQVL 358
N+ V I G+G VY + + GK++A+K ++ + E LA NE +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIML 243
Query: 359 SQVLHRN----IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVN 411
S V + + Y F K F++ + M G L +L + E D +A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 412 IVKAMAHALAYLHHDCSPS--------------IASTCPDSSNRTLLA-GTYGYIAPE-L 455
+ H ++ D P+ + C S + + GT+GY+APE L
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D +S G + ++L G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 35/208 (16%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPN-GKVFALK-----KLHTSETEELAFIKSFRNEAQVL 358
N+ V I G+G VY + + GK++A+K ++ + E LA NE +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIML 243
Query: 359 SQVLHRN----IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELD---WAKRVN 411
S V + + Y F K F++ + M G L +L + E D +A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 412 IVKAMAHALAYLHHDCSPS--------------IASTCPDSSNRTLLA-GTYGYIAPE-L 455
+ H ++ D P+ + C S + + GT+GY+APE L
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ D +S G + ++L G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 37/196 (18%)
Query: 317 GYGSVYK-AQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR-----NIVKLY 370
G+ Y+ + +VFA K + S +K + E +H+ ++V +
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKS-----MLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 371 GFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH----- 425
GF ++++ E +R SL LH AV A+ ++ + YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNNRVIH 165
Query: 426 ------------DCSPSIASTCP------DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 467
D I D + L GT YIAPE+ + + D+
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 468 YSFGVVTLEVLMGKHP 483
+S G + +L+GK P
Sbjct: 226 WSLGCILYTLLVGKPP 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 353 NEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN 411
E +L +V H NI++L FL+++ MK+G LF L + V L +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRK 128
Query: 412 IVKAM------AHALAYLHHDCSPS--------------IASTCPDSSNRTL--LAGTYG 449
I++A+ H L +H D P +C L + GT
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 450 YIAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 483
Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 102 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 161
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 162 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 219
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 220 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 279 VWSFGVLLWELMTRGAP 295
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 316 DGYGSVYKAQLPNGKVFALKK-LHTSETEELA---FIKSFRNEAQVLSQVL----HRNIV 367
DGY V K + G K+ +H + E A KS R+ ++ + +L H NI+
Sbjct: 27 DGY--VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNII 84
Query: 368 KLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMA---HALAYLH 424
L K ++L+ E M+ G L + + E + + ++ + H+ +H
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 425 HDCSPSIASTCPDSSN------------RTLLAG---------TYGYIAPELAYTMVMTE 463
D PS +S N + L A T ++APE+ E
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDE 204
Query: 464 KCDVYSFGVVTLEVLMGKHP 483
CD++S G++ +L G P
Sbjct: 205 GCDIWSLGILLYTMLAGYTP 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H + + A C + + T+ G +G
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLA---ARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
++APE V T D++SFGVV E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNL-------HNNEDAV 402
F NEA V+ ++V+L G + ++ E M G L L NN
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 403 ELDWAKRVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------- 449
+ + + +A +AYL H + + A C + + T+ G +G
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLA---ARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 450 ---------------YIAPELAYTMVMTEKCDVYSFGVVTLEV 477
++APE V T D++SFGVV E+
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--FSLDLAS 112
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA 169
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 103
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 104 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 161
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 162 -ARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 220
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 221 VWSFGVLLWELMTRGAP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 365 NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 424
+I+ F R+ M +++ +KR F +H + + +R+ + LA
Sbjct: 109 DILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168
Query: 425 HD-----------------CSPSIASTCPDSSNRTL-LAGTYGYIAPE-LAYTMVMTEKC 465
HD CS + S C + AGT G+ APE L T
Sbjct: 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI 228
Query: 466 DVYSFGVVTLEVLMGKHP 483
D++S GV+ L +L G++P
Sbjct: 229 DMWSAGVIFLSLLSGRYP 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 160
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 161 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 30/156 (19%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEYMKRGSL--FCNLHNNEDAVELD 405
++ E +L + H +I+K G C + K + L+ EY+ GSL + H+ A L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 406 WAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTLLAGTYG---------------- 449
+A+++ A HA Y+H + + A ++R + G +G
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 450 -------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ APE DV+SFGV E+L
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D++
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S GV+ E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 103
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 104 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 161
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 162 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 220
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 221 VWSFGVLLWELMTRGAP 237
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 26/143 (18%)
Query: 366 IVKLYGFCLH-RKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 424
I+ +Y H ++C+ +I E M+ G LF + D + + I++ + A+ +LH
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH 145
Query: 425 ------HDCSPSIASTCPDSSNRTLLAGTYG------------------YIAPELAYTMV 460
D P + L +G Y+APE+
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEK 205
Query: 461 MTEKCDVYSFGVVTLEVLMGKHP 483
+ CD++S GV+ +L G P
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D++
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S GV+ E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V AL K+ +TE + E +L ++ H NIVKL
Sbjct: 16 YGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 75 NKLYLVFEFLHQ 86
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
YG VYKA+ G+V AL K+ +TE + E +L ++ H NIVKL
Sbjct: 15 YGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 377 KCMFLIYEYMKR 388
++L++E++ +
Sbjct: 74 NKLYLVFEFLHQ 85
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 112
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 169
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 41 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 100
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 101 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 158
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 159 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 217
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 218 VWSFGVLLWELMTRGAP 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 35/208 (16%)
Query: 306 NIDVFSIWNYDGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV 361
ID F G GS K L G ++A+K L + ++ E ++LS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-- 78
Query: 362 LHRN---IVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 418
L RN + +L+ +F + E++ G L ++ + D A+ +
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIIS 135
Query: 419 ALAYLH-----------------HD--CSPSIASTCPDS----SNRTLLAGTYGYIAPEL 455
AL +LH H+ C + C + GT YIAPE+
Sbjct: 136 ALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 456 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
M+ D ++ GV+ E+L G P
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 26/143 (18%)
Query: 366 IVKLYGFCLH-RKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 424
I+ +Y H ++C+ +I E M+ G LF + D + + I++ + A+ +LH
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH 126
Query: 425 ------HDCSPSIASTCPDSSNRTLLAGTYG------------------YIAPELAYTMV 460
D P + L +G Y+APE+
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEK 186
Query: 461 MTEKCDVYSFGVVTLEVLMGKHP 483
+ CD++S GV+ +L G P
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 48 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 107
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 108 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 165
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 166 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 224
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 225 VWSFGVLLWELMTRGAP 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 68/213 (31%)
Query: 318 YGSVYKAQLPNG----KVFALKKLHTSETEELAFIKSFRNEAQVLSQ--VLHRNIVKL-- 369
+G V+KAQL N K+F L+ +S+++E ++ S + H N+++
Sbjct: 28 FGCVWKAQLMNDFVAVKIFPLQDK-----------QSWQSEREIFSTPGMKHENLLQFIA 76
Query: 370 ---YGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 426
G L + ++LI + +GSL L N + W + ++ + M+ L+YLH D
Sbjct: 77 AEKRGSNLEVE-LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHED 131
Query: 427 C--------SPSIASTCPDSSNRTLLA----------------------------GTYGY 450
PSIA S N L + GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 451 IAPELAYTMVMTE-----KCDVYSFGVVTLEVL 478
+APE+ + + + D+Y+ G+V E++
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 318 YGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 375
+G VY L +GK + ++ + F E ++ H N++ L G CL
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 376 RKCM-FLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAH--ALAYLHHDCSPS 430
+ ++ YMK G L F + V+ + + K M + ++H D +
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA-- 160
Query: 431 IASTCPDSSNRTLLAGTYG------------------------YIAPELAYTMVMTEKCD 466
A C T+ +G ++A E T T K D
Sbjct: 161 -ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 467 VYSFGVVTLEVLMGKHP 483
V+SFGV+ E++ P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 140
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 141 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 197
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 112
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 169
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 109
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 110 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 117
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 118 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 138/361 (38%), Gaps = 90/361 (24%)
Query: 274 PLAIVLSVIVFACLLLAKRKYKKPKLEERATNNIDVFSIWNYDGYGSVYKAQLPNGKVFA 333
PL + ++ L+ KY K K ++ N+ + N + + + N K +A
Sbjct: 2 PLGSMKDILSNYSNLIYLNKYVKEK--DKYINDYRIIRTLNQGKFNKIILCEKDN-KFYA 58
Query: 334 LKKLHTSETEE-LAFIKS-------------FRNEAQVLSQVLHRNIVKLYGFCLHRKCM 379
LKK S E+ F KS F+NE Q+++ + + + G + +
Sbjct: 59 LKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEV 118
Query: 380 FLIYEYMKRGSLFCNLHNNEDAVELDWAKRVN--------IVKAMAHALAYLHHD---CS 428
++IYEYM+ S+ L +E LD I+K++ ++ +Y+H++ C
Sbjct: 119 YIIYEYMENDSI---LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICH 175
Query: 429 PSI--ASTCPDSSNRTLLA-----------------GTYGYIAPEL--AYTMVMTEKCDV 467
+ ++ D + R L+ GTY ++ PE + K D+
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235
Query: 468 YSFGVVTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLD----QRLPPPVDRKVIRDILLA 523
+S G+ + P KI L+++ + + + P+DR
Sbjct: 236 WSLGICLYVMFYNVVP----------FSLKISLVELFNNIRTKNIEYPLDRN-------- 277
Query: 524 STISFACLQSNPKSRPTMQYVSQE-----FLITRKTP--------LVKHAAIQDISISEL 570
F +N KS + ++S E L RK P +KH + D +I +L
Sbjct: 278 ---HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDL 334
Query: 571 R 571
R
Sbjct: 335 R 335
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 32/178 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC--MFLIYEY 385
G++ A+K L + ++ E +L + H +I+K G C + L+ EY
Sbjct: 59 TGEMVAVKALKADAGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 386 MKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTL 443
+ GSL + H+ A L +A+++ A HA Y+H D + A ++R +
Sbjct: 117 VPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLA---ARNVLLDNDRLV 173
Query: 444 LAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
G +G + APE DV+SFGV E+L
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 442 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GT Y+APEL T D +SFG + E + G P
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 442 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
T GT Y+APEL T D +SFG + E + G P
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 114
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 171
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 71/194 (36%), Gaps = 34/194 (17%)
Query: 318 YGSVYKAQLPNGKVF----ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 373
+G V A+ +VF L+K + +E I S RN +L V H +V L+
Sbjct: 51 FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN--VLLKNVKHPFLVGLHFSF 108
Query: 374 LHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHALAYLH------HD 426
++ + +Y+ G LF +L +E R A +A AL YLH D
Sbjct: 109 QTADKLYFVLDYINGGELFYHLQRERCFLE----PRARFYAAEIASALGYLHSLNIVYRD 164
Query: 427 CSPS-----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 469
P +S + GT Y+APE+ + D +
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224
Query: 470 FGVVTLEVLMGKHP 483
G V E+L G P
Sbjct: 225 LGAVLYEMLYGLPP 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--YSLDLAS 115
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 116 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 172
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + + + T Y APE+ + ++ CDV+S G + E +G
Sbjct: 199 DFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLAS 492
Query: 409 RVNIVKAMAHALAYL------HHDCSPSIASTCPDSSNRTLLAGTYG------------- 449
+ ++ ALAYL H D + A SSN + G +G
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIA---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549
Query: 450 --------YIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 56/213 (26%)
Query: 317 GYGSVYKAQLPNGKV----FALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G+G V++A+ KV +A+K++ ELA K R E + L+++ H IV+ +
Sbjct: 17 GFGVVFEAK---NKVDDCNYAIKRIRLP-NRELAREKVMR-EVKALAKLEHPGIVRYFNA 71
Query: 373 CLHRKC------------MFLIYEYMKRGSL------FCNLHNNEDAVELDWAKRVNIVK 414
L + +++ + ++ +L C + E +V L ++
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 415 AMAHALAYLHHDCSPS-----------------IASTCPDSSNRTLLA------------ 445
H+ +H D PS + + D +T+L
Sbjct: 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 446 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
GT Y++PE + + K D++S G++ E+L
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 24/157 (15%)
Query: 352 RNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRV- 410
+ E + L + H++I +LY +F++ EY G LF + ++D + + + V
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF-DYIISQDRLSEEETRVVF 114
Query: 411 -NIVKAMA--HALAYLHHDCSP--------------SIASTCPDSSNRTL----LAGTYG 449
IV A+A H+ Y H D P N+ G+
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 450 YIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
Y APEL + + DV+S G++ ++ G P D
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 24/144 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN-NEDAVELDWAKRVNIVKAMAH 418
H NIV+ L + ++ EY G LF CN +ED + + ++ V + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCH 132
Query: 419 ALAYLHHD------------------CSPSIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
A+ H D C+ + + S GT YIAPE+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 461 MTEK-CDVYSFGVVTLEVLMGKHP 483
K DV+S GV +L+G +P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 24/144 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN-NEDAVELDWAKRVNIVKAMAH 418
H NIV+ L + ++ EY G LF CN +ED + + ++ V + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCH 132
Query: 419 ALAYLHHD------------------CSPSIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
A+ H D C+ + + S GT YIAPE+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 461 MTEK-CDVYSFGVVTLEVLMGKHP 483
K DV+S GV +L+G +P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 24/145 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW-AKRVNIVKAMA--HA 419
H NI+ L K ++++ E MK G L + + E + A I K + HA
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 420 LAYLHHDCSPS-----IASTCPDS--------------SNRTLLAGTY--GYIAPELAYT 458
+H D PS S P+S N L+ Y ++APE+
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 459 MVMTEKCDVYSFGVVTLEVLMGKHP 483
CD++S GV+ +L G P
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 89 KWEGITCNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTGS--IPPEI 146
+W G+ +IFE+YLS Y + +LS +F+ P+L +L ++ AL P
Sbjct: 425 EWRGLR-----NIFEIYLS--YNKY-LQLSTSSFALVPSLQRLMLRRVALKNVDISPSPF 476
Query: 147 SALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSL 186
L L +LDLS+N + + L+NL L+ N+L
Sbjct: 477 RPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 516
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 24/144 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN-NEDAVELDWAKRVNIVKAMAH 418
H NIV+ L + ++ EY G LF CN +ED + + ++ V + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCH 132
Query: 419 ALAYLHHD------------------CSPSIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
A+ H D C + + S GT YIAPE+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 461 MTEK-CDVYSFGVVTLEVLMGKHP 483
K DV+S GV +L+G +P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 30/156 (19%)
Query: 350 SFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEYMKRGSL--FCNLHNNEDAVELD 405
++ E +L + H +I+K G C + K + L+ EY+ GSL + H+ A L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 406 WAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTLLAGTYG---------------- 449
+A+++ A H+ Y+H + + A ++R + G +G
Sbjct: 122 FAQQICEGMAYLHSQHYIHRNLA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 450 -------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
+ APE DV+SFGV E+L
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 24/144 (16%)
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLF---CNLHN-NEDAVELDWAKRVNIVKAMAH 418
H NIV+ L + ++ EY G LF CN +ED + + ++ V + H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCH 131
Query: 419 ALAYLHHD------------------CSPSIASTCPDSSNRTLLAGTYGYIAPELAYTMV 460
A+ H D C + + S GT YIAPE+
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 461 MTEK-CDVYSFGVVTLEVLMGKHP 483
K DV+S GV +L+G +P
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + + L Y APE+ + ++ CDV+S G + +E +G
Sbjct: 180 DFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 23/81 (28%)
Query: 128 LVKLTIQFFALTGSIPPEISALSKLQLLDLSSNGLTG----------------------T 165
L +L + +LT +P EI LS L++LDLS N LT T
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTT 307
Query: 166 IPPEIGNLKNLIELNVGSNSL 186
+P E GNL NL L V N L
Sbjct: 308 LPWEFGNLCNLQFLGVEGNPL 328
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 437 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
D GT YIAPE+ + D ++FGV+ E+L G+ P
Sbjct: 495 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 11/53 (20%)
Query: 138 LTGSI----PPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSL 186
LTGS+ PP K+++LDL +N + +IP ++ +L+ L ELNV SN L
Sbjct: 440 LTGSVFRCLPP------KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 27/190 (14%)
Query: 318 YGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 377
Y +VYK V+ K ++EE + R E ++ ++ H NIV+LY
Sbjct: 18 YATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHENIVRLYDVIHTEN 76
Query: 378 CMFLIYEYM----KRGSLFCNLHNNEDAVELDWAK--RVNIVKAMA--HALAYLHHDCSP 429
+ L++E+M K+ + N +EL+ K + +++ +A H LH D P
Sbjct: 77 KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKP 136
Query: 430 S---IASTCPDSSNRTLLAGTYG--------------YIAPE-LAYTMVMTEKCDVYSFG 471
I LA +G Y AP+ L + + D++S G
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCG 196
Query: 472 VVTLEVLMGK 481
+ E++ GK
Sbjct: 197 CILAEMITGK 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 29/174 (16%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR-KCMFLIYEYMKRGSLF 392
L+K H + ++ ++ R+ V+S++ H VKLY FC + ++ Y K G L
Sbjct: 70 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELL 125
Query: 393 CNLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------ 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 126 KYIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTA 184
Query: 431 -IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 185 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEY 385
G++ A+K L +L ++ E ++L + H +IVK G C + K + L+ EY
Sbjct: 36 TGEMVAVKALKEGCGPQLR--SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 386 MKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTL 443
+ GSL + H A L +A+++ A HA Y+H + A ++R +
Sbjct: 94 VPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALA---ARNVLLDNDRLV 150
Query: 444 LAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
G +G + APE DV+SFGV E+L
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 437 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
D GT YIAPE+ + D ++FGV+ E+L G+ P
Sbjct: 174 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 328 NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLIYEY 385
G++ A+K L +L ++ E ++L + H +IVK G C + K + L+ EY
Sbjct: 37 TGEMVAVKALKEGCGPQLR--SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 386 MKRGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIASTCPDSSNRTL 443
+ GSL + H A L +A+++ A HA Y+H + A ++R +
Sbjct: 95 VPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALA---ARNVLLDNDRLV 151
Query: 444 LAGTYG-----------------------YIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
G +G + APE DV+SFGV E+L
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 418 HALAYLHHDCSPSIASTCPDSSNRTLLAG--------------TYGYIAPELAYT-MVMT 462
H+ +H D PS + DS R L G T Y APE+ M
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 463 EKCDVYSFGVVTLEVLMGK 481
+ D++S G + E+L GK
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 93/252 (36%), Gaps = 33/252 (13%)
Query: 318 YGSVYKAQ-LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+ VY+A L +G ALKK+ + + E +L Q+ H N++K Y +
Sbjct: 45 FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 104
Query: 377 KCMFLIYEYMKRGSLFCNLHNNEDAVEL-----DWAKRVNIVKAMA--HALAYLHHDCSP 429
+ ++ E G L + + + L W V + A+ H+ +H D P
Sbjct: 105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKP 164
Query: 430 S---IAST--------------CPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGV 472
+ I +T ++ L GT Y++PE + K D++S G
Sbjct: 165 ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGC 224
Query: 473 VTLEVLMGKHPRDXXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLASTISFACLQ 532
+ E+ + P KI D PP+ + L + C+
Sbjct: 225 LLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------PPLPSDHYSEEL--RQLVNMCIN 276
Query: 533 SNPKSRPTMQYV 544
+P+ RP + YV
Sbjct: 277 PDPEKRPDVTYV 288
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 27/155 (17%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK--FSLDLAS 112
Query: 409 RVNIVKAMAHALAYL------HHDCSPS----IASTCPDSSN----RTLLAGTY------ 448
+ ++ ALAYL H D + A+ C + R + TY
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 449 ----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 418 HALAYLHHDCSPSIASTCPDSSNRTLLAG--------------TYGYIAPELAYT-MVMT 462
H+ +H D PS + DS R L G T Y APE+ M
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 463 EKCDVYSFGVVTLEVLMGK 481
+ D++S G + E+L GK
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 185 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 194 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 43 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 99
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 100 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 158
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 159 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 42 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 98
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 99 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 157
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 158 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D++
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 27/155 (17%)
Query: 349 KSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
+ F EA + Q H +IVKL G + +++I E G L L + LD A
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLAS 492
Query: 409 RVNIVKAMAHALAYL------HHDCSPS----IASTCPDSSN----RTLLAGTY------ 448
+ ++ ALAYL H D + A+ C + R + TY
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 449 ----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 479
++APE T DV+ FGV E+LM
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 318 YGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
Y +VYK + + ALK++ E EE A + R E +L + H NIV L+
Sbjct: 15 YATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIR-EVSLLKDLKHANIVTLHDIIHTE 72
Query: 377 KCMFLIYEYMKR 388
K + L++EY+ +
Sbjct: 73 KSLTLVFEYLDK 84
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 23/148 (15%)
Query: 305 NNIDVFSIWNYDGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-- 362
+N+ + + YG+VYK L V A+K A ++F NE + L
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPV-AVKVF------SFANRQNFINEKNIYRVPLME 65
Query: 363 HRNIVKL-----YGFCLHRKCMFLIYEYMKRGSL--FCNLHNNEDAVELDWAKRVNIVKA 415
H NI + R L+ EY GSL + +LH + DW + +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHS 119
Query: 416 MAHALAYLHHDCSPSIASTCPDSSNRTL 443
+ LAYLH + P P S+R L
Sbjct: 120 VTRGLAYLHTEL-PRGDHYKPAISHRDL 146
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D++
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 430 SIASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
S D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 217 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 68 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 124
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 125 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 183
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 184 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 73/190 (38%), Gaps = 30/190 (15%)
Query: 320 SVYKAQLPNGKVFALK---KLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 376
+V +L + +A+K K H + ++ ++ R+ V+S++ H VKLY
Sbjct: 46 TVLARELATSREYAIKILEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDD 102
Query: 377 KCMFLIYEYMKRGSLFCNLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS-- 430
+ ++ Y K G L + +E A+ V+ ++ + H +H D P
Sbjct: 103 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENI 161
Query: 431 -----------------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVV 473
+ S + GT Y++PEL + D+++ G +
Sbjct: 162 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCI 221
Query: 474 TLEVLMGKHP 483
+++ G P
Sbjct: 222 IYQLVAGLPP 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 41 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 97
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 98 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 156
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 157 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 66 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 122
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 182 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL ++ D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 40 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 96
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 97 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 155
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 156 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 437 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 485
D GT YIAPE+ + D +++GV+ E+L G+ P D
Sbjct: 173 DGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 29/115 (25%)
Query: 393 CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS-----------------IASTC 435
C+L + E V L ++ H+ +H D PS + +
Sbjct: 156 CSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215
Query: 436 PDSSNRTLLA------------GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL 478
D +T+L GT Y++PE + + K D++S G++ E+L
Sbjct: 216 QDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 436 PDSSNRTLLAGTY-----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PD ++LL G Y ++APE+ K DV+S + L +L G HP
Sbjct: 238 PDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 65 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 181 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 63 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 179 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 63 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 179 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 63 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 179 VLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 66 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 122
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 182 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL +ELD + ++ M H+ +H D PS D +
Sbjct: 112 D-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D++
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 55 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 114 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 168 KILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 47 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 103
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 104 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 162
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 163 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E +L V H+NI+ L +K + +L+ E M
Sbjct: 51 AVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
+L +H +ELD + ++ M H+ +H D PS
Sbjct: 110 D-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 163
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+A T + T T Y APE+ M E D++S G + E++ G
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 34/205 (16%)
Query: 311 SIWNYDGYGSVYKAQLPNGKVFALKK-LHTSETEELA---FIKSFRNEAQVLSQVL---- 362
SI DGY K + G K+ +H + E A KS R+ + + +L
Sbjct: 17 SIQFTDGYE--VKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ 74
Query: 363 HRNIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDW-AKRVNIVKAMA--HA 419
H NI+ L K ++++ E K G L + + E + A I K + HA
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 420 LAYLHHDCSPSIASTCPDSSN------------RTLLAG---------TYGYIAPELAYT 458
+H D PS +S N + L A T ++APE+
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLER 194
Query: 459 MVMTEKCDVYSFGVVTLEVLMGKHP 483
CD++S GV+ L G P
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 142 IPPEISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSL 186
+PP I ++LDL SN + +IP ++ L+ L ELNV SN L
Sbjct: 419 LPPRI------KVLDLHSNKI-KSIPKQVVKLEALQELNVASNQL 456
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 436 PDSSNRTLLAGTY-----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PD ++LL G Y ++APE+ K D++S + L +L G HP
Sbjct: 217 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 436 PDSSNRTLLAGTY-----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PD ++LL G Y ++APE+ K D++S + L +L G HP
Sbjct: 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 436 PDSSNRTLLAGTY-----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PD ++LL G Y ++APE+ K D++S + L +L G HP
Sbjct: 219 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL +ELD + ++ M H+ +H D PS D +
Sbjct: 112 D-----ANL-XQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 436 PDSSNRTLLAGTY-----GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
PD + LL G Y ++APE+ K DV+S + L +L G HP
Sbjct: 219 PDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 62 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 118
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 119 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 178 VLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 54 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 113 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 167 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 40/220 (18%)
Query: 303 ATNNIDVFSIWNYDGYGSVYKAQLPNGKVFALKK-LHTSETEELA--FIKSFRNEAQVLS 359
T N+ S+ N++ + + +L GK +++ + S +E A F+K R +
Sbjct: 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 73
Query: 360 QVLHR-----------NIVKLYGFCLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAK 408
++LH ++ L+ + + LI EY G +F +L E A +
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIF-SLCLPELAEMVSEND 132
Query: 409 RVNIVKAMAHALAYLHH------DCSPS---IASTCPDSSNRTL---------------- 443
+ ++K + + YLH D P ++S P + +
Sbjct: 133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE 192
Query: 444 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ GT Y+APE+ +T D+++ G++ +L P
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 47 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
C + +ELD + ++ M H+ +H D PS
Sbjct: 106 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+A T S T T Y APE+ M E D++S G + E++ K
Sbjct: 160 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 54 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
C + +ELD + ++ M H+ +H D PS
Sbjct: 113 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+A T S T T Y APE+ M E D++S G + E++ K
Sbjct: 167 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 52 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
C + +ELD + ++ M H+ +H D PS
Sbjct: 111 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 164
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+A T S T T Y APE+ M E D++S G + E++ K
Sbjct: 165 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 54 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 113 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 167 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 46 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
C + +ELD + ++ M H+ +H D PS
Sbjct: 105 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+A T S T T Y APE+ M E D++S G + E++ K
Sbjct: 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 47 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPS---------- 430
C + +ELD + ++ M H+ +H D PS
Sbjct: 106 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 431 ------IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+A T S T T Y APE+ M E D++S G + E++ K
Sbjct: 160 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 418 HALAYLHHDCSPSIASTCPDSSNRTLLAG--------------TYGYIAPELAYT-MVMT 462
H+ +H D PS + D R L G T Y APE+ M
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 463 EKCDVYSFGVVTLEVLMGK 481
+ D++S G + E+L GK
Sbjct: 200 QTVDIWSVGCIMAELLQGK 218
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 182 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 91 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 150 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 334 LKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYMKRGSLFC 393
L+K H + ++ ++ R+ V+S++ H VKLY + ++ Y K G L
Sbjct: 62 LEKRHIIKENKVPYVTRERD---VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 118
Query: 394 NLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS------------------- 430
+ +E A+ V+ ++ + H +H D P
Sbjct: 119 YIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
Query: 431 IASTCPDSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 483
+ S + GT Y++PEL + D+++ G + +++ G P
Sbjct: 178 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 165 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 199
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 185 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 219
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 163 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 197
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 91 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
C + +ELD + ++ M H+ +H D PS D +
Sbjct: 150 DAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 35/176 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +++ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL + +ELD + ++ M H+ +H D PS D +
Sbjct: 112 D-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 480
+ L LA T G Y APE+ M E D++S G + E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 169 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 203
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 162 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 196
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 122 FSCFPNLVKLTIQFFALTGSIPPEISALSKLQLLD 156
F C P + QF + G + PEI+ L ++ LD
Sbjct: 182 FDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLD 216
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 23/91 (25%)
Query: 146 ISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXXXX 205
S LS LQ L L IG+LK L ELNV N LI
Sbjct: 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN-LIQSF--------------- 139
Query: 206 XXXXXXGKIPPEIAGMKNLTWLDLSNNNIKG 236
K+P + + NL LDLS+N I+
Sbjct: 140 -------KLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 89 KWEGITCNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTG--SIPPEI 146
+W G+ +IFE+YLS Y + +L++ +F+ P+L +L ++ AL S P
Sbjct: 430 EWRGLE-----NIFEIYLS--YNKY-LQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 481
Query: 147 SALSKLQLLDLS 158
L L +LDLS
Sbjct: 482 QPLRNLTILDLS 493
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 89 KWEGITCNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTG--SIPPEI 146
+W G+ +IFE+YLS Y + +L++ +F+ P+L +L ++ AL S P
Sbjct: 425 EWRGLE-----NIFEIYLS--YNKY-LQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 476
Query: 147 SALSKLQLLDLS 158
L L +LDLS
Sbjct: 477 QPLRNLTILDLS 488
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 89 KWEGITCNSAGSIFELYLSGYYAGFNWRLSQLNFSCFPNLVKLTIQFFALTG--SIPPEI 146
+W G+ +IFE+YLS Y + +L++ +F+ P+L +L ++ AL S P
Sbjct: 435 EWRGLE-----NIFEIYLS--YNKY-LQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 486
Query: 147 SALSKLQLLDLS 158
L L +LDLS
Sbjct: 487 QPLRNLTILDLS 498
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 46 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL +ELD + ++ M H+ +H D PS D +
Sbjct: 105 D-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 158
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 23/91 (25%)
Query: 146 ISALSKLQLLDLSSNGLTGTIPPEIGNLKNLIELNVGSNSLIGPIPSAXXXXXXXXXXXX 205
S LS LQ L L IG+LK L ELNV N LI
Sbjct: 120 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN-LIQSF--------------- 163
Query: 206 XXXXXXGKIPPEIAGMKNLTWLDLSNNNIKG 236
K+P + + NL LDLS+N I+
Sbjct: 164 -------KLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 333 ALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM------FLIYEYM 386
A+KKL + +++R E ++ V H+NI+ L +K + +L+ E M
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 387 KRGSLFCNLHNNEDAVELDWAKRVNIVKAMA------HALAYLHHDCSPSIASTCPDSSN 440
NL +ELD + ++ M H+ +H D PS D +
Sbjct: 112 D-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 441 RTL---LAGTYG-------------YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 481
+ L LA T G Y APE+ M E D++S G + E++ K
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 27/194 (13%)
Query: 317 GYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G GS K +L G+ ALK ++ + E L + H +I+KLY
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAMA--HALAYLHHDCS 428
+ + ++ EY G+ + D + A+R I+ A+ H +H D
Sbjct: 73 IKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 429 PS----------------IASTCPDSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFG 471
P +++ D + G+ Y APE ++ + + DV+S G
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 190
Query: 472 VVTLEVLMGKHPRD 485
V+ +L + P D
Sbjct: 191 VILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 27/194 (13%)
Query: 317 GYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGF 372
G GS K +L G+ ALK ++ + E L + H +I+KLY
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 373 CLHRKCMFLIYEYMKRGSLFCNLHNNEDAVELDWAKRV--NIVKAMA--HALAYLHHDCS 428
+ + ++ EY G+ + D + A+R I+ A+ H +H D
Sbjct: 77 IKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 134
Query: 429 PS----------------IASTCPDSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFG 471
P +++ D + G+ Y APE ++ + + DV+S G
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 194
Query: 472 VVTLEVLMGKHPRD 485
V+ +L + P D
Sbjct: 195 VILYVMLCRRLPFD 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,690,389
Number of Sequences: 62578
Number of extensions: 599945
Number of successful extensions: 2804
Number of sequences better than 100.0: 759
Number of HSP's better than 100.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 388
Number of HSP's that attempted gapping in prelim test: 1779
Number of HSP's gapped (non-prelim): 1002
length of query: 572
length of database: 14,973,337
effective HSP length: 104
effective length of query: 468
effective length of database: 8,465,225
effective search space: 3961725300
effective search space used: 3961725300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)