Query 038476
Match_columns 108
No_of_seqs 107 out of 1060
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 19:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 7.5E-48 2.6E-52 298.3 5.0 108 1-108 1-108 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 9.9E-48 3.4E-52 298.0 5.6 108 1-108 1-110 (451)
3 2btq_B Tubulin btubb; structur 100.0 3.8E-41 1.3E-45 260.0 5.5 107 1-107 1-108 (426)
4 3cb2_A Gamma-1-tubulin, tubuli 100.0 2.8E-40 9.6E-45 257.9 6.0 105 1-105 2-108 (475)
5 2bto_A Tubulin btuba; bacteria 100.0 3.5E-40 1.2E-44 257.3 5.2 105 1-107 3-111 (473)
6 1w5f_A Cell division protein F 98.9 4.6E-10 1.6E-14 84.8 2.4 64 1-105 21-89 (353)
7 1ofu_A FTSZ, cell division pro 98.8 1.6E-09 5.3E-14 80.9 3.4 62 3-105 13-79 (320)
8 2vaw_A FTSZ, cell division pro 98.8 3E-09 1E-13 81.4 3.5 63 2-105 12-79 (394)
9 1rq2_A Cell division protein F 98.7 2.5E-09 8.5E-14 81.6 2.1 63 2-105 12-79 (382)
10 3m89_A FTSZ/tubulin-related pr 98.6 1.2E-08 3.9E-13 78.6 2.1 70 4-107 45-115 (427)
11 2vap_A FTSZ, cell division pro 98.5 3.8E-08 1.3E-12 74.6 2.3 63 2-105 38-105 (364)
12 2vxy_A FTSZ, cell division pro 98.5 3.9E-08 1.3E-12 75.0 1.7 63 2-105 12-79 (382)
13 2r75_1 Cell division protein F 98.2 3.9E-07 1.3E-11 68.4 2.1 62 3-105 9-75 (338)
14 4ei7_A Plasmid replication pro 92.9 0.061 2.1E-06 40.9 2.8 72 4-105 18-91 (389)
15 3v3t_A Cell division GTPase FT 88.5 0.17 5.7E-06 38.2 1.6 62 4-105 7-68 (360)
16 4dxd_A Cell division protein F 85.7 0.53 1.8E-05 35.9 2.9 62 3-105 19-85 (396)
17 4etm_A LMPTP, low molecular we 56.3 21 0.00072 23.6 4.8 31 1-31 18-49 (173)
18 3rof_A Low molecular weight pr 41.6 45 0.0015 21.6 4.5 30 1-30 6-36 (158)
19 3jvi_A Protein tyrosine phosph 38.0 53 0.0018 21.2 4.4 30 1-30 4-34 (161)
20 4dxr_B Nesprin-1; beta-sandwic 36.7 11 0.00037 18.7 0.6 10 97-106 14-23 (35)
21 3sj5_A Methyl-accepting chemot 32.2 23 0.00079 23.7 1.9 25 15-39 16-40 (188)
22 2gi4_A Possible phosphotyrosin 29.1 69 0.0024 20.5 3.8 31 1-31 1-32 (156)
23 3tfg_A ALR2278 protein; heme-b 26.2 35 0.0012 22.7 2.0 25 15-39 16-40 (189)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=7.5e-48 Score=298.28 Aligned_cols=108 Identities=69% Similarity=1.247 Sum_probs=105.0
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccC
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGP 80 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~ 80 (108)
|||||+||+||||||||.+||+++|+||+|+++|.+.++++.+.+++++||+|+..++||||||||||||+||++|++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 99999999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred CCCCCCCCceEeccCCCCcccccccccC
Q 038476 81 YGQMFRPNNFVFGQSRAGNNWAKGHYIE 108 (108)
Q Consensus 81 ~~~lf~~~n~i~~~~gsgnNwa~Gyy~~ 108 (108)
++.||+|+|++++|+|||||||+||||+
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~ 108 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTE 108 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSH
T ss_pred ccceecccceEEccccccCCccccchhh
Confidence 9999999999999999999999999973
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=9.9e-48 Score=297.99 Aligned_cols=108 Identities=37% Similarity=0.754 Sum_probs=100.3
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcc--cccceeeeEeecCCCCcccceeEecCCCCcccceec
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDL--QLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRS 78 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~ 78 (108)
|||||+||+||||||||.+||+++|.||+|+++|.+.++++. +.+++++||+|+..++||||||||||||+||++|++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 999999999999999999999999999999999998876653 478899999999999999999999999999999999
Q ss_pred cCCCCCCCCCceEeccCCCCcccccccccC
Q 038476 79 GPYGQMFRPNNFVFGQSRAGNNWAKGHYIE 108 (108)
Q Consensus 79 ~~~~~lf~~~n~i~~~~gsgnNwa~Gyy~~ 108 (108)
++++.||+|+|++++|+|||||||+||||+
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~ 110 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTI 110 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTS
T ss_pred cccccccCHHHeeeccccccCCCCeeeccc
Confidence 999999999999999999999999999984
No 3
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=3.8e-41 Score=259.99 Aligned_cols=107 Identities=37% Similarity=0.671 Sum_probs=85.7
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCC-cccccceeeeEeecCCCCcccceeEecCCCCcccceecc
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNS-DLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSG 79 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~-~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~ 79 (108)
|||||+||+||||||||.+||++++.||+++++|.+.+++ +.+.+++++||+|+..++|+||||+|||||++|++++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 9999999999999999999999999999999999988766 556788999999999999999999999999999999999
Q ss_pred CCCCCCCCCceEeccCCCCccccccccc
Q 038476 80 PYGQMFRPNNFVFGQSRAGNNWAKGHYI 107 (108)
Q Consensus 80 ~~~~lf~~~n~i~~~~gsgnNwa~Gyy~ 107 (108)
+++.+|+|++++.+++|||||||+|||+
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~ 108 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNV 108 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTH
T ss_pred ccccccCcccccccccCccCcccccccc
Confidence 9999999999999999999999999986
No 4
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=2.8e-40 Score=257.86 Aligned_cols=105 Identities=38% Similarity=0.751 Sum_probs=99.3
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccC
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGP 80 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~ 80 (108)
|||||+||+||||||||.+||++++.||+++++|.+.+..+.+.+++++||+|++.++|+||||||||||++|+++++++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 79999999999999999999999999999999999877655566789999999999999999999999999999999999
Q ss_pred CCCCCCCCceEeccC--CCCccccccc
Q 038476 81 YGQMFRPNNFVFGQS--RAGNNWAKGH 105 (108)
Q Consensus 81 ~~~lf~~~n~i~~~~--gsgnNwa~Gy 105 (108)
++.+|+|+|++++++ |||||||+||
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~ 108 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF 108 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh
Confidence 999999999999998 7999999996
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=3.5e-40 Score=257.28 Aligned_cols=105 Identities=31% Similarity=0.612 Sum_probs=98.2
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCC-CceeCCCcccccceeeeEe---ecCCCCcccceeEecCCCCcccce
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPL-AGYIGNSDLQLERVTVYYN---KASNGRSVPRAVLMDLEPGTMDAV 76 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~-g~~~~~~~~~~~~~~~fF~---e~~~~~~vpRailiD~ep~~i~~i 76 (108)
|||||+||+||||||||.+||++++.||+|+++ |.+.++++. .+++++||+ |+..++||||||+|||||++|+.+
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i 81 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNV 81 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhh
Confidence 999999999999999999999999999999999 998876665 678999999 999999999999999999999999
Q ss_pred eccCCCCCCCCCceEeccCCCCccccccccc
Q 038476 77 RSGPYGQMFRPNNFVFGQSRAGNNWAKGHYI 107 (108)
Q Consensus 77 ~~~~~~~lf~~~n~i~~~~gsgnNwa~Gyy~ 107 (108)
+.++ +.+|.|++++++++|||||||+|||+
T Consensus 82 ~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~ 111 (473)
T 2bto_A 82 KATS-GSLFNPANLISRTEGAGGNFAVGYLG 111 (473)
T ss_dssp HHHS-TTCSCGGGEEECSSCCTTCHHHHHTS
T ss_pred hccc-cccccccceEecccCCCCCcCCCcch
Confidence 9988 89999999999999999999999986
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=98.89 E-value=4.6e-10 Score=84.83 Aligned_cols=64 Identities=19% Similarity=0.159 Sum_probs=49.2
Q ss_pred CEeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccC
Q 038476 1 MREILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGP 80 (108)
Q Consensus 1 m~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~ 80 (108)
|++|++|+|||||+|++..||+ |+++ | ++.+.+|+|.+.++.++.
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~~ia~nTD~q~L~~~~a-- 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH--G--------------------------VEFVAVNTDLQVLEASNA-- 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT--T--------------------------EEEEEEESCHHHHHTCCC--
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCCC--
Confidence 5789999999999999999998 5542 1 366888988887776532
Q ss_pred CCCCCCCCceEecc-----CCCCccccccc
Q 038476 81 YGQMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 81 ~~~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
|+.+..++ .||||||+.|+
T Consensus 66 ------~~~i~iG~~~t~G~GAG~n~~~G~ 89 (353)
T 1w5f_A 66 ------DVKIQIGENITRGLGAGGRPEIGE 89 (353)
T ss_dssp ------SEEEECCTTTTTTSCCTTCHHHHH
T ss_pred ------CcEEEccCcccCCCCCCCChHHHH
Confidence 45566655 49999999995
No 7
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=98.83 E-value=1.6e-09 Score=80.91 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=48.9
Q ss_pred eEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCC
Q 038476 3 EILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYG 82 (108)
Q Consensus 3 eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~ 82 (108)
+|++|+|||||+|++..||+ |+++ | ++.+.+|+|++.++.++
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~--g--------------------------v~~i~~ntD~q~L~~~~----- 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIA----- 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESBTGGGSSCS-----
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCC-----
Confidence 69999999999999999998 5542 1 36788999988887664
Q ss_pred CCCCCCceEecc-----CCCCccccccc
Q 038476 83 QMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 83 ~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
.|+.+..++ .||||||+.|+
T Consensus 55 ---a~~~i~iG~~~t~g~GAG~n~~~G~ 79 (320)
T 1ofu_A 55 ---ARTVLQLGPGVTKGLGAGANPEVGR 79 (320)
T ss_dssp ---CSEEEECCHHHHTTBCCCSCHHHHH
T ss_pred ---CCcEEEccCCccCCCCCCCCHHHHH
Confidence 245566654 59999999996
No 8
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=98.78 E-value=3e-09 Score=81.43 Aligned_cols=63 Identities=14% Similarity=0.135 Sum_probs=49.5
Q ss_pred EeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCC
Q 038476 2 REILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPY 81 (108)
Q Consensus 2 ~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~ 81 (108)
.+|++|+|||||++++..||+ |+++ | .+.|.+|+|.+.++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~---- 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIA---- 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC--S--------------------------EEEEEEESCTTTTSSCS----
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC--C--------------------------CCEEEecCCHHHHhcCC----
Confidence 479999999999999999998 5541 1 36788999988877553
Q ss_pred CCCCCCCceEecc-----CCCCccccccc
Q 038476 82 GQMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 82 ~~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
.|+.+..++ .||||||+.|+
T Consensus 55 ----a~~ki~iG~~~t~G~GAG~n~~~G~ 79 (394)
T 2vaw_A 55 ----ARTVLQLGPGVTKGLGAGANPEVGR 79 (394)
T ss_dssp ----SSCEEECCHHHHSSSCCCSCHHHHH
T ss_pred ----CCcEEEccccccCCCCCCCCHHHHH
Confidence 245666664 59999999996
No 9
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=98.74 E-value=2.5e-09 Score=81.57 Aligned_cols=63 Identities=14% Similarity=0.101 Sum_probs=46.5
Q ss_pred EeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCC
Q 038476 2 REILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPY 81 (108)
Q Consensus 2 ~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~ 81 (108)
.+|++|+|||||++++..||+ |+++ | ++.|.+|+|.+.++.++
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~---- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK--G--------------------------VEFIAINTDAQALLMSD---- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESCHHHHHHCC----
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEecCCHHHHhcCC----
Confidence 479999999999999999998 5542 1 36788999988877664
Q ss_pred CCCCCCCceEecc-----CCCCccccccc
Q 038476 82 GQMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 82 ~~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
.|+.+..++ .||||||+.|+
T Consensus 55 ----a~~~i~iG~~~t~G~GAG~n~~~G~ 79 (382)
T 1rq2_A 55 ----ADVKLDVGRDSTRGLGAGADPEVGR 79 (382)
T ss_dssp ----CSEEEECCTTTC-----CCCHHHHH
T ss_pred ----CCcEEEecccccCCCCCCCChHHHH
Confidence 244455554 59999999996
No 10
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=98.60 E-value=1.2e-08 Score=78.64 Aligned_cols=70 Identities=17% Similarity=0.096 Sum_probs=44.1
Q ss_pred EEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCCC
Q 038476 4 ILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYGQ 83 (108)
Q Consensus 4 ii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~~ 83 (108)
|..|-|||+|+.+...|.+ +++ ..++++||+|+||+|+.+++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~~------------------------~~g~~~~~~iavNtd~~dl~~L~~~~~-- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YKF------------------------SNGTTCYPTLAVNFAESDMMHLQNIIK-- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CBC------------------------TTSCBSCCEEEEESSGGGGTTCSSSCG--
T ss_pred EEEEEECCcHHHHHHHHHH-----hCc------------------------ccCCcCceEEEEECCHHHHHHHhcCCC--
Confidence 6789999999998776532 211 135678999999999999999877653
Q ss_pred CCCCCce-EeccCCCCccccccccc
Q 038476 84 MFRPNNF-VFGQSRAGNNWAKGHYI 107 (108)
Q Consensus 84 lf~~~n~-i~~~~gsgnNwa~Gyy~ 107 (108)
++.+ +.++.||||||++||++
T Consensus 94 ---~~~i~l~G~~GAG~np~~G~~~ 115 (427)
T 3m89_A 94 ---EDRIHFDGLKGAARTPSVVTDL 115 (427)
T ss_dssp ---GGEEEC-----------CHHHH
T ss_pred ---cceEEecCCCCCCCCHHHHHHH
Confidence 3454 56889999999999875
No 11
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=98.49 E-value=3.8e-08 Score=74.60 Aligned_cols=63 Identities=16% Similarity=0.228 Sum_probs=45.2
Q ss_pred EeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCC
Q 038476 2 REILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPY 81 (108)
Q Consensus 2 ~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~ 81 (108)
.+|++|+||||||+++..||+. +++ | + ..+.+|+|.+.++.++.
T Consensus 38 ~~I~vIGvGg~G~n~v~~m~~~-----gi~--g--------------v------------~fia~NTD~q~L~~~~a--- 81 (364)
T 2vap_A 38 AKITVVGCGGAGNNTITRLKME-----GIE--G--------------A------------KTVAINTDAQQLIRTKA--- 81 (364)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHH-----TCT--T--------------E------------EEEEEESBHHHHHTSCC---
T ss_pred CeEEEEeeCchHHHHHHHHHHh-----CCC--C--------------C------------CEEEEcCcHHHHhcCCC---
Confidence 3699999999999999999983 331 1 0 24677777777665532
Q ss_pred CCCCCCCceEecc-----CCCCccccccc
Q 038476 82 GQMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 82 ~~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
|+.+..++ .|||||||+|.
T Consensus 82 -----~~ki~iG~~~t~G~GAGnn~a~G~ 105 (364)
T 2vap_A 82 -----DKKILIGKKLTRGLGAGGNPKIGE 105 (364)
T ss_dssp -----SEEEECCTTTTTTBCCTTCHHHHH
T ss_pred -----CcEEEeccccccCCCCCCChHHHH
Confidence 34455544 59999999984
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=98.46 E-value=3.9e-08 Score=74.96 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=48.3
Q ss_pred EeEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCC
Q 038476 2 REILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPY 81 (108)
Q Consensus 2 ~eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~ 81 (108)
.+|++|+|||||+++...+|+ |+++ | ++.|.+|+|...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~a--- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ--G--------------------------VEYIAVNTDAQALNLSKA--- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------CEEEEEESBHHHHHTCCC---
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEeCCHHHHhcCCC---
Confidence 469999999999999999998 4432 1 467889998888776542
Q ss_pred CCCCCCCceEecc-----CCCCccccccc
Q 038476 82 GQMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 82 ~~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
|+.+..++ .||||||+.|+
T Consensus 56 -----~~ki~iG~~~t~G~GAGnn~a~G~ 79 (382)
T 2vxy_A 56 -----EVKMQIGAKLTRGLGAGANPEVGK 79 (382)
T ss_dssp -----SEEEECCHHHHTTBCCTTCHHHHH
T ss_pred -----CcEEEecccccCCCCCCCChHHHH
Confidence 34455553 59999999985
No 13
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=98.22 E-value=3.9e-07 Score=68.38 Aligned_cols=62 Identities=19% Similarity=0.299 Sum_probs=48.8
Q ss_pred eEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCC
Q 038476 3 EILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYG 82 (108)
Q Consensus 3 eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~ 82 (108)
.|..|.|||||+++...+|+ ++++ + ++.|.+|+|+..++....
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~~-------------------------g---v~~ia~NTD~q~L~~~~a---- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGIE-------------------------G---VELYAINTDVQHLSTLKV---- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC-------------------------S---CEEEEEESBHHHHHTCCC----
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCCC-------------------------C---ceEEEEECCHHHHhcCCC----
Confidence 48899999999999999997 3220 1 588999999998886532
Q ss_pred CCCCCCceEecc-----CCCCccccccc
Q 038476 83 QMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 83 ~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
|+.+..++ .|||||||.|+
T Consensus 52 ----~~ki~iG~~~t~g~GAGnn~a~G~ 75 (338)
T 2r75_1 52 ----PNKIQIGEKVTRGLGAGAKPEVGE 75 (338)
T ss_dssp ----SEEEECCHHHHTTBCCTTCHHHHH
T ss_pred ----CcEEEecCcccCCCCCCCChHHHH
Confidence 45666665 89999999984
No 14
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=92.88 E-value=0.061 Score=40.85 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=45.0
Q ss_pred EEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCCC
Q 038476 4 ILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYGQ 83 (108)
Q Consensus 4 ii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~~ 83 (108)
|..|-+||||+.|-..|.+ +.. +.....+..++|.|+++...+..+... .
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~----------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~---~ 67 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KET----------------------QIKNNKYPYRAILVNTNSQDFNKIEIK---N 67 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCC----------------------CCTTCSCCCEEEEEECCCHHHHHSCCC---S
T ss_pred EEEEEECCchHHHHHHHHh-----ccc----------------------ccccccccccEEEEECCHHHHhhccCc---c
Confidence 6789999999999877653 111 011122345889999998877765322 1
Q ss_pred CCCCCceEecc--CCCCccccccc
Q 038476 84 MFRPNNFVFGQ--SRAGNNWAKGH 105 (108)
Q Consensus 84 lf~~~n~i~~~--~gsgnNwa~Gy 105 (108)
.......++.. .|+|+||..|+
T Consensus 68 ~~~~g~~~~~g~g~GaG~~p~~G~ 91 (389)
T 4ei7_A 68 TGNVRKIQLEGYEQGAARNPQVGE 91 (389)
T ss_dssp CSSEEEEECTTCCCTTCCCHHHHH
T ss_pred hhhhhhhccCCCCCCCCCChHHHH
Confidence 12223333332 49999999886
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=88.52 E-value=0.17 Score=38.22 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=35.2
Q ss_pred EEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCCC
Q 038476 4 ILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYGQ 83 (108)
Q Consensus 4 ii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~~ 83 (108)
|..|-||++|+.+-..+.+. +. + -.+|.+++|...+..+...
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~~---~--------------------------v~~iaiNTD~q~L~~~~~~---- 48 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----CG---D--------------------------YNALFINTSKKDLDSLKHA---- 48 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----CT---T--------------------------SEECEEESCHHHHHTCSSC----
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC---C--------------------------ceEEEEECCHHHHhhCCCC----
Confidence 77899999999998877541 10 0 1346777777666654321
Q ss_pred CCCCCceEeccCCCCccccccc
Q 038476 84 MFRPNNFVFGQSRAGNNWAKGH 105 (108)
Q Consensus 84 lf~~~n~i~~~~gsgnNwa~Gy 105 (108)
+.+-.+....|||+||+.|+
T Consensus 49 --~~ki~ig~GlGAG~np~vG~ 68 (360)
T 3v3t_A 49 --KHTYHIPYAEGCGKERKKAV 68 (360)
T ss_dssp --SCEEECC------CCHHHHH
T ss_pred --ccEEEcCCCCCCCCCHHHHH
Confidence 11112224579999999996
No 16
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=85.65 E-value=0.53 Score=35.93 Aligned_cols=62 Identities=15% Similarity=0.187 Sum_probs=40.0
Q ss_pred eEEEEecCchHHHHHHHHHHHHHhhcCCCCCCceeCCCcccccceeeeEeecCCCCcccceeEecCCCCcccceeccCCC
Q 038476 3 EILHIQGGQCGNQIGSNFWEVVCVNRVLIPLAGYIGNSDLQLERVTVYYNKASNGRSVPRAVLMDLEPGTMDAVRSGPYG 82 (108)
Q Consensus 3 eii~lqvGQcGnqiG~~fw~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRailiD~ep~~i~~i~~~~~~ 82 (108)
-|..|-||+||+.+-..+.+. ++. . ...|.+++|...+....
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~----------------g------------vefiaiNTD~qaL~~s~----- 60 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN----------------N------------VEFIAINTDGQALNLSK----- 60 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC----------------S------------EEEEEEESCHHHHHTCC-----
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC----------------C------------ceEEEEECCHHHHhcCC-----
Confidence 377899999999876555431 210 1 12377888877665432
Q ss_pred CCCCCCceEecc-----CCCCccccccc
Q 038476 83 QMFRPNNFVFGQ-----SRAGNNWAKGH 105 (108)
Q Consensus 83 ~lf~~~n~i~~~-----~gsgnNwa~Gy 105 (108)
.+..+..++ .||||||+.|+
T Consensus 61 ---a~~ki~lG~~~t~GlGAG~np~vG~ 85 (396)
T 4dxd_A 61 ---AESKIQIGEKLTRGLGAGANPEIGK 85 (396)
T ss_dssp ---CSEEEECCHHHHTTSCCTTCHHHHH
T ss_pred ---CccEEEcCccccCCCCCCCChHHHH
Confidence 134455554 59999999996
No 17
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=56.31 E-value=21 Score=23.60 Aligned_cols=31 Identities=16% Similarity=0.326 Sum_probs=27.7
Q ss_pred CEeEEEEecC-chHHHHHHHHHHHHHhhcCCC
Q 038476 1 MREILHIQGG-QCGNQIGSNFWEVVCVNRVLI 31 (108)
Q Consensus 1 m~eii~lqvG-QcGnqiG~~fw~~l~~eh~~~ 31 (108)
|..|++|+.| -|=.+++..+++.+..++++.
T Consensus 18 M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~ 49 (173)
T 4etm_A 18 MISVLFVCLGNICRSPMAEAIFRDLAAKKGLE 49 (173)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCT
T ss_pred ccEEEEEeCCcchhhHHHHHHHHHHHHHcCCC
Confidence 7889999999 599999999999999887764
No 18
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=41.57 E-value=45 Score=21.64 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=26.3
Q ss_pred CEeEEEEecCc-hHHHHHHHHHHHHHhhcCC
Q 038476 1 MREILHIQGGQ-CGNQIGSNFWEVVCVNRVL 30 (108)
Q Consensus 1 m~eii~lqvGQ-cGnqiG~~fw~~l~~eh~~ 30 (108)
|..|++|+.|. |=.+++..+++.+..+.++
T Consensus 6 m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl 36 (158)
T 3rof_A 6 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNI 36 (158)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEeCCchhHHHHHHHHHHHHHHHcCC
Confidence 78899999997 7799999999999887665
No 19
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=37.95 E-value=53 Score=21.24 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.3
Q ss_pred CEeEEEEecCc-hHHHHHHHHHHHHHhhcCC
Q 038476 1 MREILHIQGGQ-CGNQIGSNFWEVVCVNRVL 30 (108)
Q Consensus 1 m~eii~lqvGQ-cGnqiG~~fw~~l~~eh~~ 30 (108)
|..|++|+.|. |=.+++..+++.+..+.++
T Consensus 4 m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl 34 (161)
T 3jvi_A 4 SMKLLFVCLGNICRSPAAEAVMKKVIQNHHL 34 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHHcCC
Confidence 77899999997 7799999999999987665
No 20
>4dxr_B Nesprin-1; beta-sandwich, LINC complex, structural protein; HET: DMU; 2.32A {Homo sapiens} PDB: 4dxs_B*
Probab=36.65 E-value=11 Score=18.72 Aligned_cols=10 Identities=30% Similarity=0.454 Sum_probs=7.9
Q ss_pred CCcccccccc
Q 038476 97 AGNNWAKGHY 106 (108)
Q Consensus 97 sgnNwa~Gyy 106 (108)
-.||+||.++
T Consensus 14 ~aNNFARSF~ 23 (35)
T 4dxr_B 14 LSNNFARSFH 23 (35)
T ss_dssp TCCTGGGSSS
T ss_pred hhhhHHHHhH
Confidence 4699999875
No 21
>3sj5_A Methyl-accepting chemotaxis protein; no or O2-sensing protein, signaling protein; HET: HEM; 1.67A {Caldanaerobacter subterraneus} SCOP: d.278.1.1 PDB: 3nvr_A* 3tf0_A* 1u4h_A* 1u56_A* 3m0b_A* 1u55_A* 3tf1_A* 1xbn_A* 3nvu_A* 3eee_A* 3iqb_A* 3lah_A* 3lai_A*
Probab=32.22 E-value=23 Score=23.71 Aligned_cols=25 Identities=8% Similarity=-0.164 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeCC
Q 038476 15 QIGSNFWEVVCVNRVLIPLAGYIGN 39 (108)
Q Consensus 15 qiG~~fw~~l~~eh~~~~~g~~~~~ 39 (108)
.-|.+.|+.+.++.+++.++.+...
T Consensus 16 ~yG~e~w~~i~~~a~~~~~~~f~~~ 40 (188)
T 3sj5_A 16 LYGNDVVDESLKSVGWEPDRVITPL 40 (188)
T ss_dssp HHCHHHHHHHHHTTTCCTTCCCCSS
T ss_pred HcCHHHHHHHHHHcCCCCCCceeec
Confidence 4588999999999998877655443
No 22
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=29.11 E-value=69 Score=20.53 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=26.6
Q ss_pred CEeEEEEecCc-hHHHHHHHHHHHHHhhcCCC
Q 038476 1 MREILHIQGGQ-CGNQIGSNFWEVVCVNRVLI 31 (108)
Q Consensus 1 m~eii~lqvGQ-cGnqiG~~fw~~l~~eh~~~ 31 (108)
|..|++|+.|. |=.+++..+++.+..+.++.
T Consensus 1 m~~VLFVC~gNicRSpmAEai~~~~~~~~gl~ 32 (156)
T 2gi4_A 1 MKKILFICLGNICRSPMAEFIMKDLVKKANLE 32 (156)
T ss_dssp CCEEEEECSSCSSHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 77899999995 88999999999999876653
No 23
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=26.21 E-value=35 Score=22.71 Aligned_cols=25 Identities=20% Similarity=0.400 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeCC
Q 038476 15 QIGSNFWEVVCVNRVLIPLAGYIGN 39 (108)
Q Consensus 15 qiG~~fw~~l~~eh~~~~~g~~~~~ 39 (108)
.-|.+.|+.+.++.++++.+.+...
T Consensus 16 ~~G~e~w~~i~~~a~~~~~~~f~~~ 40 (189)
T 3tfg_A 16 HHGEDTWEAIKQKAGLEDIDFFVGM 40 (189)
T ss_dssp HHCHHHHHHHHHHTTCSSCCSCCTT
T ss_pred HcCHHHHHHHHHHhCCCCCCeEeee
Confidence 3588999999999988666655443
Done!