BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038478
(228 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224132816|ref|XP_002327887.1| predicted protein [Populus trichocarpa]
gi|222837296|gb|EEE75675.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 38 VMRDFYMKDVGKCAKIFVPV-NHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAK 96
+ R+ YM + C K++VPV + H+YL ++ + + EIWD + S + +
Sbjct: 1 MFRENYMSALFSCEKMYVPVFDKERRHFYLFVLHMKKQVVEIWDSLAKSSGSSV-DKRLP 59
Query: 97 TILRSLDKILNGDARKVLAAGTKFEHFTVLQVTEFAVIPESYNYGVLILLMMQRGGKWLQ 156
+L LD + D ++ G F F+V + Y+ GV ++ M + Q
Sbjct: 60 NMLAILDILFEDDIQQNYPDGWSFASFSVDRSPNVPQQTNGYDCGVYVIKFMLAPEEATQ 119
Query: 157 NPTFQCDFDTERSQLVLQLLTSIVNSIKEKVMEKSRDYNMANKITSELMCAAVENK 212
P F D DTER +VL+LL VNS + ++ K+ Y + + T++ + V+NK
Sbjct: 120 -PDFVFDSDTERLDVVLRLLDGNVNSCRNELAAKAEAYFLRSSGTNDSLRIYVQNK 174
>gi|224115366|ref|XP_002332178.1| predicted protein [Populus trichocarpa]
gi|222832426|gb|EEE70903.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 38 VMRDFYMKDVGKCAKIFVPV-NHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAK 96
+ R+ YM + C K++VPV + H YL ++ + + EIWD + S + +
Sbjct: 1 MFRENYMSALFSCEKMYVPVFDKERRHLYLFVLHMKKQVVEIWDSLAKSSGSSV-DKRLP 59
Query: 97 TILRSLDKILNGDARKVLAAGTKFEHFTVLQVTEFAVIPESYNYGVLILLMMQRGGKWLQ 156
+L LD + D ++ G F F+V + Y+ GV ++ M + Q
Sbjct: 60 NMLAILDILFEDDIQQNYPDGWSFASFSVDRSPNVPQQTNGYDCGVYVIKFMLAPEEATQ 119
Query: 157 NPTFQCDFDTERSQLVLQLLTSIVNSIKEKVMEKS 191
P F D DTER +VL+LL VNS + ++ K+
Sbjct: 120 -PDFVFDSDTERLDVVLRLLDGNVNSCRNELAAKA 153
>gi|432947041|ref|XP_004083913.1| PREDICTED: LOW QUALITY PROTEIN: sentrin-specific protease 6-like
[Oryzias latipes]
Length = 1067
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 26/82 (31%)
Query: 17 EKLQERVLRNACDIDTL---------------HEDVVMRDFYMKDVGKCAKIFVPVNHGF 61
++L +R RNA D +L H D+ +DF IFVP+N
Sbjct: 743 KRLNQRERRNATDTTSLPIQKRKHNRVKTWTRHVDLFQKDF----------IFVPINES- 791
Query: 62 CHWYLLIIFIPEMRAEIWDPNP 83
HWYL +I P + ++D NP
Sbjct: 792 AHWYLAVICFPGLEGPVFDKNP 813
>gi|393212429|gb|EJC97929.1| hypothetical protein FOMMEDRAFT_171324 [Fomitiporia mediterranea
MF3/22]
Length = 1308
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 46 DVGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEA-KTILRSLDK 104
D+ K I VP+N HWYL II+ PE + P P+ TSK + A + + RSL K
Sbjct: 774 DIFKKKYIIVPINENI-HWYLAIIYNPEHILDPPLPKPTPRTSKRVSDAASRVVTRSLRK 832
>gi|357471053|ref|XP_003605811.1| hypothetical protein MTR_4g040020 [Medicago truncatula]
gi|355506866|gb|AES88008.1| hypothetical protein MTR_4g040020 [Medicago truncatula]
Length = 206
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 40 RDFYMKDVGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTIL 99
+DF K+ KIF+PVN HWYL+++ + E + + D P + + E +
Sbjct: 37 KDFMPKEDHSVTKIFIPVNDQGVHWYLMVVDVMERKMVLLDSLPCPERNYLRRREVLKLG 96
Query: 100 RSLDKILNGD-ARKVLAAGTKFEHFTVLQVTEFAVIP-ESYNYGVLILLMMQRGGKWLQN 157
++++L+ D + + +F ++Q S + GV + KW+
Sbjct: 97 IFIEEMLSNDYVVHGVDSSISISNFCIIQPRSLPTQRIGSNDCGVWV-------AKWMIE 149
Query: 158 PTFQCDFD------TERSQLVLQLLTSIVNSIKEKVMEKSRDY 194
+ D+ R +L L L+ S N + +V+ K+ +Y
Sbjct: 150 CALKSDYQNINVVTATRMKLALHLVNSSNNILFMEVLPKAANY 192
>gi|56202058|dbj|BAD73587.1| EBNA-1-like protein [Oryza sativa Japonica Group]
gi|56202261|dbj|BAD73702.1| EBNA-1-like protein [Oryza sativa Japonica Group]
Length = 613
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 47 VGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPST 85
+ + +IF+P+N HWYL ++ + + + ++ D +PST
Sbjct: 514 IAQNEQIFIPINRNKNHWYLAVVHVKQRQIQLLDSSPST 552
>gi|156120425|ref|NP_001095358.1| sentrin-specific protease 7 [Bos taurus]
gi|300681110|sp|A7MBJ2.1|SENP7_BOVIN RecName: Full=Sentrin-specific protease 7; AltName:
Full=SUMO-1-specific protease 2; AltName:
Full=Sentrin/SUMO-specific protease SENP7
gi|154425521|gb|AAI51591.1| SENP7 protein [Bos taurus]
gi|296491505|tpg|DAA33558.1| TPA: sentrin/SUMO-specific protease 7 [Bos taurus]
Length = 1047
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 53 IFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILRSLDKILNGDARK 112
IFVPVN HWYL +I P + +++ P T+ E+ R++D L+ +
Sbjct: 848 IFVPVNES-SHWYLAVICFPWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSS-- 904
Query: 113 VLAAGTKFEHFTVLQVT 129
L++GT+ + VT
Sbjct: 905 ALSSGTEDSQSPEMNVT 921
>gi|326676909|ref|XP_002665676.2| PREDICTED: sentrin-specific protease 6 [Danio rerio]
Length = 597
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 26/81 (32%)
Query: 18 KLQERVLRNACDIDTL---------------HEDVVMRDFYMKDVGKCAKIFVPVNHGFC 62
+L +R RN D +L H D+ +DF IFVP+N
Sbjct: 287 RLNQRERRNTVDTSSLPIQKRKHNRVKTWTRHVDLFQKDF----------IFVPINES-A 335
Query: 63 HWYLLIIFIPEMRAEIWDPNP 83
HWYL +I P + + +PNP
Sbjct: 336 HWYLAVICFPGLESAQVEPNP 356
>gi|224157122|ref|XP_002337805.1| predicted protein [Populus trichocarpa]
gi|222869833|gb|EEF06964.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 39 MRDFYMKDVGKCAKIFVPV-NHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKT 97
+++ YM D+ C K FVPV ++ H++L ++ + + EIWD ++ S +
Sbjct: 109 IKENYMSDLLCCEKAFVPVFDNERRHFFLFVLQLKKQVVEIWDSLAASCQSDWVDRRLHN 168
Query: 98 ILRSLDKILNGDARKVLAAGTKFEHFTV 125
+L SLD + D + F F V
Sbjct: 169 LLVSLDALFKDDIDQNYQKVWSFTDFRV 196
>gi|440910707|gb|ELR60471.1| Sentrin-specific protease 7, partial [Bos grunniens mutus]
Length = 1032
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 53 IFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILRSLDKILNGDARK 112
IFVPVN HWYL +I P + +++ P T+ E+ R++D L+ +
Sbjct: 833 IFVPVNES-SHWYLAVICFPWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSS-- 889
Query: 113 VLAAGTKFEHFTVLQVT 129
L++GT+ + VT
Sbjct: 890 ALSSGTEDSQSPEMNVT 906
>gi|159154967|gb|AAI54421.1| Zgc:171230 protein [Danio rerio]
Length = 388
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 26/82 (31%)
Query: 17 EKLQERVLRNACDIDTL---------------HEDVVMRDFYMKDVGKCAKIFVPVNHGF 61
++L +R RN D +L H D+ +DF IFVP+N
Sbjct: 77 KRLNQRERRNTVDTSSLPIQKRKHNRVKTWTRHVDLFQKDF----------IFVPINES- 125
Query: 62 CHWYLLIIFIPEMRAEIWDPNP 83
HWYL +I P + + +PNP
Sbjct: 126 AHWYLAVICFPGLESAQVEPNP 147
>gi|449294890|gb|EMC90913.1| hypothetical protein BAUCODRAFT_161022 [Baudoinia compniacensis
UAMH 10762]
Length = 237
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Query: 50 CAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILRSLDKILNGD 109
C I VPVN HW LL++ + + ++DP +S S A I L +L
Sbjct: 96 CTHILVPVNSKAVHWALLLVSVTNHTSWLYDPAGGVFSS----STASDISTHLSHLLRSK 151
Query: 110 ARKVLAAGTKFEHFTVLQVTEFAVIPESYNYGVLIL 145
+ GT F L +E +S++ G+L++
Sbjct: 152 SM-----GTHGLDFARLPASEVPQQQKSHDCGILVV 182
>gi|218196533|gb|EEC78960.1| hypothetical protein OsI_19426 [Oryza sativa Indica Group]
Length = 344
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 47 VGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPST 85
+ + +IF+P+N HWYL+++ + + + ++ D +PST
Sbjct: 269 IAQNEQIFIPINRNKNHWYLVVVHVKQRQIQLLDSSPST 307
>gi|133778728|gb|AAI34227.1| Zgc:171230 protein [Danio rerio]
Length = 300
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 32 TLHEDVVMRDFYMKDVGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWDPNP 83
T H D+ +DF IFVP+N HWYL +I P + + +PNP
Sbjct: 19 TRHVDLFQKDF----------IFVPINES-AHWYLAVICFPGLESAQVEPNP 59
>gi|373457118|ref|ZP_09548885.1| extracellular solute-binding protein family 1 [Caldithrix abyssi
DSM 13497]
gi|371718782|gb|EHO40553.1| extracellular solute-binding protein family 1 [Caldithrix abyssi
DSM 13497]
Length = 431
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 152 GKWLQNPTFQCDFDTERSQLVLQLLTSIVNSIKEKVMEKSRDYNMANKITSELMCAAVEN 211
G WL + ++ +TE ++ QL+ +VN K K+M K DY +AN + + + A + N
Sbjct: 220 GGWLFDDQYRPTLNTEATKKAAQLIYDLVN--KYKIMPKEADYEIANALFKDGLAAMIIN 277
Query: 212 ------KYLKN 216
YLKN
Sbjct: 278 GPWSWSTYLKN 288
>gi|297738245|emb|CBI27446.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 43 YMKDVGKCAKIFVPVNHGFC--HWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILR 100
Y+ ++ C K+F+P+ H C HWYL +I +I D S K KT++
Sbjct: 21 YINELDDCEKLFIPM-HDECPGHWYLCVIDFKNSHIQILDSLRSKNQDKFRFQSVKTVVE 79
Query: 101 SLDKILNGDARKVLAAGTKFEHFTVLQVTEFAVIPESYNYGVLILLMMQR 150
K+ G F++ ++YGV ++ MQR
Sbjct: 80 FCQTFF-----KLYDIGKDVFQFSIDWAPLIPTQENGWDYGVHVIRHMQR 124
>gi|348677832|gb|EGZ17649.1| Hypothetical protein PHYSODRAFT_498310 [Phytophthora sojae]
Length = 495
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 46 DVGKCAKIFVPVNHGFCHWYLLIIFIPEMRAEIWD 80
DV KIF+PVN G HW + +IF+ E R + +D
Sbjct: 368 DVFAMDKIFMPVNVGNMHWCMAVIFMTEKRIQYYD 402
>gi|281354721|gb|EFB30305.1| hypothetical protein PANDA_005306 [Ailuropoda melanoleuca]
Length = 1021
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 53 IFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILRSLDKILNGDARK 112
IFVPVN HWYL +I P + I++ P T++ +++ +++D L+ +
Sbjct: 822 IFVPVNES-SHWYLAVICFPWLEEAIYEDFPQTVSQHSQVQQSQHDNKTIDNDLHSTS-- 878
Query: 113 VLAAGTKFEHFT 124
L+ GT+ H T
Sbjct: 879 TLSLGTEDSHST 890
>gi|426226303|ref|XP_004007287.1| PREDICTED: phospholipase B1, membrane-associated [Ovis aries]
Length = 1405
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 104 KILNGDARKVLAAGTKFEHFTVLQVTEFAVIPESYNYGVLILLMMQRGGKWLQNPTFQCD 163
K +N D + L+ + + LQ +FAV+ + + L+ L +RGG L + C
Sbjct: 1241 KTVNWDFQSALSTLS----YQYLQREDFAVVVQPFFQNTLVPLN-KRGGADLTFFSEDCF 1295
Query: 164 FDTERSQLVLQLLTSIVNSIKEKVMEKSRDYNMANKITSELMCAAVENKYLKNLRKSR 221
+ER ++ ++ N++ E V K+ N T +L C + EN YL+ LR S+
Sbjct: 1296 HFSERGHA--EMAIALWNNMLEPVGHKTTSNNFTYSRT-KLKCPSAENPYLRTLRNSQ 1350
>gi|301763405|ref|XP_002917132.1| PREDICTED: sentrin-specific protease 7-like [Ailuropoda
melanoleuca]
Length = 1090
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 53 IFVPVNHGFCHWYLLIIFIPEMRAEIWDPNPSTLTSKMFNSEAKTILRSLDKILNGDARK 112
IFVPVN HWYL +I P + I++ P T++ +++ +++D L+ +
Sbjct: 891 IFVPVNES-SHWYLAVICFPWLEEAIYEDFPQTVSQHSQVQQSQHDNKTIDNDLHSTS-- 947
Query: 113 VLAAGTKFEHFT 124
L+ GT+ H T
Sbjct: 948 TLSLGTEDSHST 959
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,261,505,615
Number of Sequences: 23463169
Number of extensions: 119791514
Number of successful extensions: 361543
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 361530
Number of HSP's gapped (non-prelim): 34
length of query: 228
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 91
effective length of database: 9,144,741,214
effective search space: 832171450474
effective search space used: 832171450474
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 74 (33.1 bits)