BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038487
(472 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 201/394 (51%), Gaps = 18/394 (4%)
Query: 58 QVANALVSEMQASL--ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCAR 115
++ + + M+ L ++NE ++ + M SY+ PNG E G + ++L T++ +L
Sbjct: 28 EICDRMGESMRLGLQKSTNEKSS-IKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVT 86
Query: 116 LGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLG 175
L GK + + IP++ M + ELF YIA A F+ N K+ LG
Sbjct: 87 LEGKGKS-PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLE-----NNGMKDKKFDLG 140
Query: 176 YTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIG 234
+T+S Q + ++W K F+A+ + + L K +LN++ A+V+DT+G
Sbjct: 141 FTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVG 200
Query: 235 SLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSS- 293
+LA + C + +GTGTN AY+E S V G K E+VI+TEWG F
Sbjct: 201 TLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGE 258
Query: 294 --FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLM 351
T+FD S+D +SL+PG ++EK+VSGMYLGE+VR +++ + ++ LF +P +L
Sbjct: 259 LDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLK 318
Query: 352 MPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLA 411
+ L + + +D + L + + P V C++V +RAA LA
Sbjct: 319 VRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLA 378
Query: 412 AAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIF 445
AGI I++++ R E+ V V+G LY+ + F
Sbjct: 379 GAGIACILRRINRSEV---TVGVDGSLYKFHPKF 409
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 216/414 (52%), Gaps = 26/414 (6%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +++ EM+ L A+ T + ML +++ S P+G E G + ++L T+F +L
Sbjct: 22 LLEISKRFRKEMEKGLGATTHPTAAVKMLPTFVRSTPDGTEHGEFLALDLGGTNFRVLWV 81
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ ++ + +IP D+M + +LFD+IA A F++ K+KKL
Sbjct: 82 KVTDNGLQKVEMENQIYAIPEDIMRGSGTQLFDHIAECLANFMDK-------LQIKDKKL 134
Query: 175 --GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVD 230
G+T+S Q + W K F ++ +V I +A+ + D ++ + A+V+
Sbjct: 135 PLGFTFSFPCHQTKLDESFLVSWTKGFKSSGVEGRDVVALIRKAIQRRGDFDIDIVAVVN 194
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ + + +C + +GTG+NA Y+E + + +G G + I+ EWG F
Sbjct: 195 DTVGTMMTCGYDDHNCEIGLIVGTGSNACYMEEMRHIDMVEGDE---GRMCINMEWGAFG 251
Query: 291 ---SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
S + TEFD +D SLNPG +FEK++SGMY+GE+VR +L++MAKE LFG +
Sbjct: 252 DDGSLNDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEELLFGGKLS 311
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGI-TDSTPKAREAVVEVCDIVTER 406
P+L+ D++ D + + +R+ E + + D T + A +C IV+ R
Sbjct: 312 PELLNTGRFETKDIS----DIEGEKDGIRKAREVLMRLGLDPTQEDCVATHRICQIVSTR 367
Query: 407 AARLAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
+A L AA + +++++ E +S + V+G +Y+ + F LH +V ++
Sbjct: 368 SASLCAATLAAVLQRIKENKGEERLRSTIGVDGSVYKKHPHFAKRLHKTVRRLV 421
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 212/412 (51%), Gaps = 22/412 (5%)
Query: 55 RLWQVANALVSEMQASLASNET--TTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLIL 112
+L +V + EM+ L S ET + + ML +Y+ + P+G EKG + ++L T+F +L
Sbjct: 469 QLLEVKRRMKVEMERGL-SKETHASAPVKMLPTYVCATPDGTEKGDFLALDLGGTNFRVL 527
Query: 113 CARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEK 172
R+ ++H + +IP +VM T ELFD+I A F+ G
Sbjct: 528 LVRVRNGKWGGVEMHNKIYAIPQEVMHGTGDELFDHIVQCIADFLEYMGMKGVSLP---- 583
Query: 173 KLGYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVD 230
LG+T+S Q + +KW K F A+ E +VT + +A+ + + ++ V A+V+
Sbjct: 584 -LGFTFSFPCQQNSLDESILLKWTKGFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVN 642
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ F + C + +GTG+NA Y+E + V +G + G + ++ EWG F
Sbjct: 643 DTVGTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVEG---EEGRMCVNMEWGAFG 699
Query: 291 SSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
+ TEFD ++D SLNPG FEK++SGMYLGEIVR +L+ K LF +
Sbjct: 700 DNGCLDDFRTEFDVAVDELSLNPGKQRFEKMISGMYLGEIVRNILIDFTKRGLLFRGRIS 759
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407
+L + ++ + D + VR L+ + G+ +ST V EVC +V RA
Sbjct: 760 ERLKTRGIFETKFLSQIESDCLALLQ-VRAILQHL-GL-ESTCDDSIIVKEVCTVVARRA 816
Query: 408 ARLAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
A+L AG+ ++ ++ ++ K V V+G LY+ + F +H +V ++
Sbjct: 817 AQLCGAGMAAVVDRIRENRGLDALKVTVGVDGTLYKLHPHFAKVMHETVKDL 868
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 211/414 (50%), Gaps = 26/414 (6%)
Query: 56 LWQVANALVSEMQASLASN-ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L + EM+ L+ + T + ML +++ S+P+G EKG + ++L + F IL
Sbjct: 36 LIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 95
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + + E P +++ + +LFD++A F+ K+KKL
Sbjct: 96 QVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR-------KIKDKKL 148
Query: 175 --GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVD 230
G+T+S Q I W K F A+ +V +N+A+ K D + + A+V+
Sbjct: 149 PVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVN 208
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ + ++ C + +GTGTNA Y+E + + +G G + I+TEWG F
Sbjct: 209 DTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFG 265
Query: 291 ---SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
S TEFD ++DA SLNPG +FEK+VSGMYLGE+VR +L++MAKE LF +
Sbjct: 266 DDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRIT 325
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407
P+L+ D++ + ++ H +E L + G+ S +V VC IV+ R+
Sbjct: 326 PELLTRGKFNTSDVSAIEKNKEGLHN-AKEILTRL-GVEPSDDDC-VSVQHVCTIVSFRS 382
Query: 408 ARLAAAGIVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
A L AA + I+ +L G L ++ V V+G LY+ + + H ++ ++
Sbjct: 383 ANLVAATLGAILNRLRDNKGTPRL-RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 20/410 (4%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + +EM+ L + ML S++ P+G E G + ++L T+F +L
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + ++H + +IP ++M T +ELFD+I + F++ G L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKG-----PRMPL 598
Query: 175 GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDT 232
G+T+S Q + + I W K F A D V +VT + A+ + + ++ V A+V+DT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSS 292
+G++ + C + +GTG+NA Y+E + V +G G++ I+ EWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGDN 715
Query: 293 SF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPK 349
T +D +D SLN G +EK++SGMYLGEIVR +L+ K+ LF +
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISET 775
Query: 350 LMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409
L + ++ + D + VR L+++ G+ +ST V VC +V+ RAA+
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQ-VRAILQQL-GL-NSTCDDSILVKTVCGVVSRRAAQ 832
Query: 410 LAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
L AG+ ++ K+ ++ V V+G LY+ + F +H +V E+
Sbjct: 833 LCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 211/414 (50%), Gaps = 26/414 (6%)
Query: 56 LWQVANALVSEMQASLASN-ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L + EM+ L+ + T + ML +++ S+P+G EKG + ++L + F IL
Sbjct: 36 LIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 95
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + + E P +++ + +LFD++A F+ K+KKL
Sbjct: 96 QVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR-------KIKDKKL 148
Query: 175 --GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVD 230
G+T+S Q I W K F A+ +V +N+A+ K D + + A+V+
Sbjct: 149 PVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVN 208
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ + ++ C + +GTGTNA Y+E + + +G G + I+TEWG F
Sbjct: 209 DTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFG 265
Query: 291 ---SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
S TEFD ++DA SLNPG +FEK+VSGMYLGE+VR +L++MAKE LF +
Sbjct: 266 DDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRIT 325
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407
P+L+ D++ + ++ H +E L + G+ S +V VC IV+ R+
Sbjct: 326 PELLTRGKFNTSDVSAIEKNKEGLHN-AKEILTRL-GVEPSDDDC-VSVQHVCTIVSFRS 382
Query: 408 ARLAAAGIVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
A L AA + I+ +L G L ++ V V+G LY+ + + H ++ ++
Sbjct: 383 ANLVAATLGAILNRLRDNKGTPRL-RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 203/410 (49%), Gaps = 20/410 (4%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + +EM+ L + ML S++ P+G E G + ++L +F +L
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGANFRVLLV 543
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + ++H + +IP ++M T +ELFD+I + F++ G L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKG-----PRMPL 598
Query: 175 GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDT 232
G+T+S Q + + I W K F A D V +VT + A+ + + ++ V A+V+DT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSS 292
+G++ + C + +GTG+NA Y+E + V +G G++ I+ EWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGDN 715
Query: 293 SF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPK 349
T +D +D SLN G +EK++SGMYLGEIVR +L+ K+ LF +
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISET 775
Query: 350 LMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409
L + ++ + D + VR L+++ G+ +ST V VC +V+ RAA+
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQ-VRAILQQL-GL-NSTCDDSILVKTVCGVVSRRAAQ 832
Query: 410 LAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
L AG+ ++ K+ ++ V V+G LY+ + F +H +V E+
Sbjct: 833 LCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 214/406 (52%), Gaps = 27/406 (6%)
Query: 62 ALVSEMQASLASN--ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGK 119
A+ ++M+ ++A + L ML +++ + P+G E+G + ++L T+F +L R+
Sbjct: 22 AVQAQMRKAMAKGLRGEASSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG 81
Query: 120 NEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWS 179
+ S+++ SIP V + Q+LFD+I F S + LG+T+S
Sbjct: 82 VQITSEIY----SIPETVAQGSGQQLFDHIVDCIVDF-----QQKQGLSGQSLPLGFTFS 132
Query: 180 HSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDTIGSLA 237
Q+ + W K F A+D + +V+ + +A+ + + + V A+V+DT+G++
Sbjct: 133 FPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMM 192
Query: 238 GGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS---SSSF 294
+ + C + +GTGTNA Y+E + V G SG + I+ EWG F S +
Sbjct: 193 SCGYEDPRCEIGLIVGTGTNACYMEELRNVA---GVPGDSGRMCINMEWGAFGDDGSLAM 249
Query: 295 PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPY 354
T FDAS+D S+NPG FEK++SGMYLGEIVR +LL + LF +L
Sbjct: 250 LSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRD 309
Query: 355 LLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAG 414
+ + ++ + D+ + VR LE++ G+ ++ A V+EVC V++RAA+L AG
Sbjct: 310 IFKTKFLSEIESDSLALRQ-VRAILEDL-GLPLTSDDAL-MVLEVCQAVSQRAAQLCGAG 366
Query: 415 IVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
+ +++K+ G EL S V V+G LY+ + F + + ++V E+
Sbjct: 367 VAAVVEKIRENRGLEELAVS-VGVDGTLYKLHPRFSSLVAATVREL 411
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 209/414 (50%), Gaps = 26/414 (6%)
Query: 56 LWQVANALVSEMQASLASN-ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L + EM+ L+ + T + ML +++ S+P+G EKG + ++L + F IL
Sbjct: 36 LIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 95
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + + E P +++ + +LFD++A F+ K+KKL
Sbjct: 96 QVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR-------KIKDKKL 148
Query: 175 --GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVD 230
G+T+S Q I W K F A+ +V +N+A+ K D + + A+V+
Sbjct: 149 PVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVN 208
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ + ++ C + +GTGTNA Y+E + + +G G + I+TEWG F
Sbjct: 209 DTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFG 265
Query: 291 ---SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
S TEFD +D SLNPG +FEK+VSGMYLGE+VR +L++MAKE LF +
Sbjct: 266 DDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRIT 325
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407
P+L+ D++ + ++ H +E L + G+ S +V VC IV+ R+
Sbjct: 326 PELLTRGKFNTSDVSAIEKNKEGLHN-AKEILTRL-GVEPSDDDC-VSVQHVCTIVSFRS 382
Query: 408 ARLAAAGIVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
A L AA + I+ +L G L ++ V V+G LY+ + + H ++ ++
Sbjct: 383 ANLVAATLGAILNRLRDNKGTPRL-RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 204/410 (49%), Gaps = 20/410 (4%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + +EM+ L + ML S++ P+G E G + ++L T+F +L
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + ++H + +IP ++M T +ELFD+I + F++ G L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKG-----PRMPL 598
Query: 175 GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDT 232
G+T+S Q + + I W K F A D V +VT + A+ + + ++ V A+V+DT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSS 292
+G++ + C + +GTG+NA Y+E + V +G G++ I+ EWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGDN 715
Query: 293 SF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPK 349
T +D ++ SLN G +EK++SGMYLGEIVR +L+ K+ LF +
Sbjct: 716 GCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISET 775
Query: 350 LMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409
L + ++ + D + VR L+++ G+ +ST V VC +V+ RAA+
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQ-VRAILQQL-GL-NSTCDDSILVKTVCGVVSRRAAQ 832
Query: 410 LAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
L AG+ ++ K+ ++ V V+G LY+ + F +H +V E+
Sbjct: 833 LCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 209/414 (50%), Gaps = 26/414 (6%)
Query: 56 LWQVANALVSEMQASLASN-ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L + EM+ L+ + T + ML +++ S+P+G EKG + ++L + F IL
Sbjct: 36 LIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 95
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + + E P +++ + +LFD++A F+ K+KKL
Sbjct: 96 QVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR-------KIKDKKL 148
Query: 175 --GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVD 230
G+T+S Q I W K F A+ +V +N+A+ K D + + A+V+
Sbjct: 149 PVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVN 208
Query: 231 DTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS 290
DT+G++ + ++ C + +GTGTNA Y+E + + +G G + I+TEWG F
Sbjct: 209 DTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFG 265
Query: 291 ---SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347
S TEFD +D SLNPG +FEK+VSGMYLGE+VR +L++MAKE LF +
Sbjct: 266 DDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRIT 325
Query: 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407
P+L+ D++ + ++ H +E L + G+ S +V VC IV+ R+
Sbjct: 326 PELLTRGKFNTSDVSAIEKNKEGLHN-AKEILTRL-GVEPSDDDC-VSVQHVCTIVSFRS 382
Query: 408 ARLAAAGIVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
A L AA + I+ +L G L ++ V V+G LY+ + + H ++ ++
Sbjct: 383 ANLVAATLGAILNRLRDNKGTPRL-RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 20/410 (4%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + +EM+ L + ML S++ P+G E G + ++L T+F +L
Sbjct: 484 LLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLV 543
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + ++H + +IP ++M T +ELFD+I + F++ G L
Sbjct: 544 KIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKG-----PRMPL 598
Query: 175 GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDT 232
G+T+S Q + + I W K F A D V +VT + A+ + + ++ V A+V+DT
Sbjct: 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDT 658
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSS 292
+G++ + C + +GTG+NA Y+E + V +G G++ I+ EWG F +
Sbjct: 659 VGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGDN 715
Query: 293 SF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPK 349
T +D +D SLN G +EK++SGMYLGEIVR +L+ K+ LF +
Sbjct: 716 GCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISET 775
Query: 350 LMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409
L + ++ + D + VR L+++ G+ +ST V VC +V+ RAA+
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQ-VRAILQQL-GL-NSTCDDSILVKTVCGVVSRRAAQ 832
Query: 410 LAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
L AG+ ++ K+ ++ V V+G LY+ + F +H +V E+
Sbjct: 833 LCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 205/410 (50%), Gaps = 20/410 (4%)
Query: 56 LWQVANALVSEMQASL-ASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V L +EM+ L + + ML S++ S+P+G E G + ++L T+F +L
Sbjct: 484 LMEVKKRLRTEMEMGLRKETNSKATVKMLPSFVRSIPDGTEHGDFLALDLGGTNFRVLLV 543
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174
++ + ++H + SIP ++M T ELFD+I + F++ G L
Sbjct: 544 KIRSGKKRTVEMHNKIYSIPLEIMQGTGDELFDHIVSCISDFLDYMGIKG-----PRMPL 598
Query: 175 GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDT 232
G+T+S Q I W K F A D + + + A+ + + ++ V A+V+DT
Sbjct: 599 GFTFSFPCHQTNLDCGILISWTKGFKATDCEGHDVASLLRDAVKRREEFDLDVVAVVNDT 658
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSS 292
+G++ + C + +GTGTNA Y+E + V +G G++ I+ EWG F +
Sbjct: 659 VGTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMVEG---NQGQMCINMEWGAFGDN 715
Query: 293 SF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPK 349
T+FD +D SLN G FEK++SGMYLGEIVR +L+ K+ LF +
Sbjct: 716 GCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGEIVRNILIDFTKKGFLFRGQISEP 775
Query: 350 LMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409
L + ++ + D + VR L+++ G+ +ST V VC +V++RAA+
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQ-VRAILQQL-GL-NSTCDDSILVKTVCGVVSKRAAQ 832
Query: 410 LAAAGIVGIIKKLGR---IELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456
L AG+ +++K+ ++ V V+G LY+ + F +H +V E+
Sbjct: 833 LCGAGMAAVVEKIRENRGLDHLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 212/413 (51%), Gaps = 24/413 (5%)
Query: 56 LWQVANALVSEMQASLASN-ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L + EM+ L+ + T + ML +++ S+P+G EKG + ++L + F IL
Sbjct: 36 LIDILTRFKKEMKNGLSRDYNPTASVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 95
Query: 115 RLGG-KNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKK 173
++ KN+ +S + E P +++ + +LFD++A F+ K+
Sbjct: 96 QVNHEKNQNVS-MESEIYDTPENIVHGSGTQLFDHVADCLGDFMEKKK-----IKDKKLP 149
Query: 174 LGYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYALVDD 231
+G+T+S Q I W K F A+ +V +N+A+ K D + + A+V+D
Sbjct: 150 VGFTFSFPCRQSKIDEAVLITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVND 209
Query: 232 TIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFS- 290
T+G++ + ++ C + +GTGTNA Y+E + + +G G + I+TEWG F
Sbjct: 210 TVGTMMTCGYDDQQCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFGD 266
Query: 291 --SSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPP 348
S TEFD LD SLNPG +FEK+VSGMY+GE+VR +L++MAKE LF + P
Sbjct: 267 DGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGELVRLILVKMAKEGLLFEGRITP 326
Query: 349 KLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAA 408
+L+ D++ + +D E + +E L + G+ S +V +C IV+ R+A
Sbjct: 327 ELLTRGKFNTSDVSAIEKD-KEGIQNAKEILTRL-GVEPSDVDC-VSVQHICTIVSFRSA 383
Query: 409 RLAAAGIVGIIKKL----GRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457
L AA + I+ +L G L ++ V V+G LY+ + + H ++ ++
Sbjct: 384 NLVAATLGAILNRLRDNKGTPRL-RTTVGVDGSLYKMHPQYSRRFHKTLRRLV 435
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 203/426 (47%), Gaps = 21/426 (4%)
Query: 42 LRKFARECATPVPRLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYG 101
+ F + P L V +SE++ L+ + ++ M+ ++ P G+E G +
Sbjct: 27 IENFEKIFTVPTETLQAVTKHFISELEKGLS--KKGGNIPMIPGWVMDFPTGKESGDFLA 84
Query: 102 INLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQ--ELFDYIAGEFAKFVNA 159
I+L T+ ++ +LGG D + + +P D M T EL+++IA F++
Sbjct: 85 IDLGGTNLRVVLVKLGGDR--TFDTTQSKYRLP-DAMRTTQNPDELWEFIADSLKAFIDE 141
Query: 160 HPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAK 218
G ++ LG+T+S Q +W K F + +V + + + K
Sbjct: 142 QFPQG---ISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITK 198
Query: 219 HDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGP----S 274
++ + V AL++DT G+L + + + V GTG N AY + + K QG
Sbjct: 199 RNIPIEVVALINDTTGTLVASYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDI 258
Query: 275 PKSGEIVISTEWGNFSSSS--FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVL 332
P S + I+ E+G+F + P T++D ++D ES PG FEK+ SG YLGEI+R L
Sbjct: 259 PPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLAL 318
Query: 333 LRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKA 392
+ M K+ +F + K P+++ A + +D E+ E + + FGI ++T +
Sbjct: 319 MDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQE 377
Query: 393 REAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSS 452
R+ + + +++ RAARL+ GI I +K G K + +G +Y Y F+ ++
Sbjct: 378 RKLIRRLSELIGARAARLSVCGIAAICQKRG---YKTGHIAADGSVYNRYPGFKEKAANA 434
Query: 453 VWEMLG 458
+ ++ G
Sbjct: 435 LKDIYG 440
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 80 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 131
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 132 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 191
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 192 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 248
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 249 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 308
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 309 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 365
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 366 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 417
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 80 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 131
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 132 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 191
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 192 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 248
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 249 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 308
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 309 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 365
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 366 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 417
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 34 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 93
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 94 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 145
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 146 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 205
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 206 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 262
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 263 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 322
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 323 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 379
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 380 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 431
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 95 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 146
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 147 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 206
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 207 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 263
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 264 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 323
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 324 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 380
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 381 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 432
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 80 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 131
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 132 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 191
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 192 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 248
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 249 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 308
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 309 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 365
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 366 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 417
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 30 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 89
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 90 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 141
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 142 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 201
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 202 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 258
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 259 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 318
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 319 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 375
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 376 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 427
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 16 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 75
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 76 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 127
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 128 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 187
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 188 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 244
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 245 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 304
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 305 EASEQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 361
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 362 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASV 413
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 56 LWQVANALVSEMQASLA-SNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
L +V + EM L + ML +Y+ S P G E G + ++L T+F ++
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 115 RLGGKNE---PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKE 171
++G E + H + SIP D M T++ LFDYI+ + F++ H K
Sbjct: 95 KVGEGEEGQWSVKTKH-QMYSIPEDAMTGTAEMLFDYISECISDFLDKH-------QMKH 146
Query: 172 KKL--GYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKH-DLNMRVYA 227
KKL G+T+S V + W K F A+ +V + A+ + D M V A
Sbjct: 147 KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVA 206
Query: 228 LVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWG 287
+V+DT+ ++ + + C + +GTG NA Y+E Q V +G G + ++TEWG
Sbjct: 207 MVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWG 263
Query: 288 NFSSSSFP---VTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGD 344
F S + E+D +D S NPG ++EKL+ G Y+GE+VR VLLR+ E LF
Sbjct: 264 AFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHG 323
Query: 345 TVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404
+L ++ + DT + ++ + G+ ST + V C+ V+
Sbjct: 324 EASEQLRTRGAFETRFVSQVKSDTGDRKQIY--NILSTLGLRPSTTDC-DIVRRACESVS 380
Query: 405 ERAARLAAAGIVGIIKKL--GRIE-LKKSVVNVEGGLYEHYRIFRNYLHSSV 453
RAA + +AG+ G+I ++ R E + + V V+G +Y+ + F+ H+SV
Sbjct: 381 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGXVYKLHPSFKERFHASV 432
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 193/400 (48%), Gaps = 20/400 (5%)
Query: 55 RLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114
++ + +SE+ L+ + ++ M+ ++ P G+E G + ++L T+ ++
Sbjct: 40 KMRSIVKHFISELDKGLS--KKGGNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97
Query: 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNA-HPDNGNDTSAKEKK 173
+LGG ++ D + + +P + TS++L+ +IA +FV+ +PD ++
Sbjct: 98 KLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG----VSEPLP 151
Query: 174 LGYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDT 232
LG+T+S+ Q S +W K F +V + + + K ++ + V AL++DT
Sbjct: 152 LGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDT 211
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKS----GEIVISTEWGN 288
G+L + + + +GTG N AY + + K +G P+ + I+ E+G+
Sbjct: 212 TGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGS 271
Query: 289 FSSSSF--PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTV 346
F + P T++D +D ES PG FEK+ SG YLGEI+R VLL + +F D
Sbjct: 272 FDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331
Query: 347 PPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTER 406
KL Y++ + + D E+ E + + I ++T R+ + ++ ++V R
Sbjct: 332 ISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNI-ETTVVERKLIRKLAELVGTR 390
Query: 407 AARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFR 446
AARL G+ I K G K + + +G ++ Y ++
Sbjct: 391 AARLTVCGVSAICDKRG---YKTAHIAADGSVFNRYPGYK 427
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 21/412 (5%)
Query: 56 LWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCAR 115
L +V + E+ L + ++ M+ ++ P G+E G Y I+L T+ ++ +
Sbjct: 41 LRKVVKHFIDELNKGLT--KKGGNIPMIPGWVMEFPTGKESGNYLAIDLGGTNLRVVLVK 98
Query: 116 LGGKNEPISDLHREEISIPSDVMCCTSQE-LFDYIAGEFAKF-VNAHPDNGNDTSAKEKK 173
L G + D + + +P D+ QE L+ +IA F V N DT
Sbjct: 99 LSGNH--TFDTTQSKYKLPHDMRTTKHQEELWSFIADSLKDFMVEQELLNTKDTLP---- 152
Query: 174 LGYTWSHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDT 232
LG+T+S+ Q +W K F + +V + ++K +L + + AL++DT
Sbjct: 153 LGFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLLQNEISKRELPIEIVALINDT 212
Query: 233 IGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGP----SPKSGEIVISTEWGN 288
+G+L + + + V GTG N A+ + + K +G P + + I+ E+G+
Sbjct: 213 VGTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAINCEYGS 272
Query: 289 FSSSSF--PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTV 346
F + P T++D ++D +S PG FEK+ SG YLGE++R VLL + ++ + D
Sbjct: 273 FDNEHLVLPRTKYDVAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLELNEKGLMLKDQD 332
Query: 347 PPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTER 406
KL PY++ A + D E+ E + ++ FG+ + P+ R+ + +C+++ R
Sbjct: 333 LSKLKQPYIMDTSYPARIEDDPFENLEDTDDIFQKDFGVKTTLPE-RKLIRRLCELIGTR 391
Query: 407 AARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLG 458
AARLA GI I +K G K + +G +Y Y F+ + ++ G
Sbjct: 392 AARLAVCGIAAICQKRG---YKTGHIAADGSVYNKYPGFKEAAAKGLRDIYG 440
>pdb|3QQQ|A Chain A, Crystal Structure Of Non-Symbiotic Plant Hemoglobin From
Trema Tomentosa
pdb|3QQQ|B Chain B, Crystal Structure Of Non-Symbiotic Plant Hemoglobin From
Trema Tomentosa
Length = 168
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 387 DSTPKAREAVVEVCDIVTERAARLAAAGIVGI----IKKLGRIELKKSVVNVEGGLYEHY 442
+ PK + + V + E A +L AG V + +K+LG I K VVN EH+
Sbjct: 68 EQNPKLKPHAMTVFVMTCESAVQLRKAGKVTVRESNLKRLGAIHFKNGVVN------EHF 121
Query: 443 RIFRNYLHSSVWE 455
+ R L ++ E
Sbjct: 122 EVTRFALLETIKE 134
>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The
Nematode Parasite Necator Americanus And A Vaccine
Antigen For Human Hookworm Infection
Length = 196
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 161 PDNGNDTSAKEKKL--------GYTWSHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNI 212
PDNG A++K L + D +P A K K A + VE+T + N
Sbjct: 8 PDNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNA 67
Query: 213 NQALAKH 219
Q + KH
Sbjct: 68 KQCVFKH 74
>pdb|3HNC|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
pdb|3HNC|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
pdb|3HND|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
pdb|3HND|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
pdb|3HNE|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
pdb|3HNE|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
pdb|3HNF|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
pdb|3HNF|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
Length = 792
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 26/120 (21%)
Query: 108 DFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDT 167
D+ IL AR+ +S+LH+E + SDVM ++L++YI +P NG +
Sbjct: 73 DYAILAARIA-----VSNLHKETKKVFSDVM----EDLYNYI----------NPHNGKHS 113
Query: 168 SAKEKKLGYTWSHSVDQVTTLSPSAIKWKNFAAN----DTVEETLVTNINQALAKHDLNM 223
K T + L+ + I ++F+ N T+E + + IN +A+ +M
Sbjct: 114 PMVAKS---TLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHM 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,805,126
Number of Sequences: 62578
Number of extensions: 519096
Number of successful extensions: 1413
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1276
Number of HSP's gapped (non-prelim): 35
length of query: 472
length of database: 14,973,337
effective HSP length: 102
effective length of query: 370
effective length of database: 8,590,381
effective search space: 3178440970
effective search space used: 3178440970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)