Query 038487
Match_columns 472
No_of_seqs 141 out of 756
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 20:05:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038487.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038487hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 1E-126 4E-131 1004.5 38.1 420 38-472 17-448 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 3E-122 1E-126 964.3 38.5 411 42-472 6-424 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 9E-119 3E-123 950.3 42.9 427 35-472 20-457 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 7E-105 2E-109 842.1 41.6 422 36-472 6-434 (451)
5 2yhx_A Hexokinase B; transfera 100.0 8E-100 3E-104 803.7 40.0 415 40-472 7-430 (457)
6 1cza_N Hexokinase type I; stru 100.0 1.2E-98 4E-103 853.6 41.4 417 41-472 469-895 (917)
7 1cza_N Hexokinase type I; stru 100.0 7.2E-83 2.5E-87 724.2 36.4 420 38-472 18-447 (917)
8 2qm1_A Glucokinase; alpha-beta 99.3 3.1E-10 1.1E-14 113.2 22.7 278 97-457 6-291 (326)
9 1z05_A Transcriptional regulat 99.2 2.1E-09 7.2E-14 112.1 25.8 317 45-456 59-385 (429)
10 1z6r_A MLC protein; transcript 99.2 1.6E-09 5.4E-14 112.0 24.0 320 44-456 35-362 (406)
11 2hoe_A N-acetylglucosamine kin 99.2 3.4E-09 1.2E-13 108.8 22.6 310 44-470 38-354 (380)
12 2ch5_A NAGK protein; transfera 99.1 6.2E-08 2.1E-12 97.4 27.8 272 98-457 7-294 (347)
13 3vgl_A Glucokinase; ROK family 99.0 3.2E-08 1.1E-12 99.2 23.2 285 98-471 3-296 (321)
14 4db3_A Glcnac kinase, N-acetyl 98.8 5.5E-07 1.9E-11 90.5 23.7 273 98-470 25-309 (327)
15 3r8e_A Hypothetical sugar kina 98.8 1.5E-07 5.2E-12 94.2 19.1 281 94-470 16-302 (321)
16 2ap1_A Putative regulator prot 98.8 4.6E-07 1.6E-11 90.6 22.0 274 97-470 24-309 (327)
17 2yhw_A Bifunctional UDP-N-acet 98.8 5.8E-07 2E-11 90.5 22.6 287 96-470 29-322 (343)
18 3mcp_A Glucokinase; structural 98.8 5.8E-07 2E-11 92.2 21.5 270 96-470 8-300 (366)
19 3vov_A Glucokinase, hexokinase 98.7 7.6E-07 2.6E-11 88.5 20.9 260 99-459 3-269 (302)
20 2aa4_A Mannac kinase, putative 98.6 6.5E-07 2.2E-11 87.7 16.4 252 99-456 3-260 (289)
21 4htl_A Beta-glucoside kinase; 98.6 5.1E-06 1.8E-10 82.2 21.0 264 98-470 5-274 (297)
22 2q2r_A Glucokinase 1, putative 98.5 2.6E-06 8.8E-11 87.0 17.6 261 97-457 29-335 (373)
23 3htv_A D-allose kinase, alloki 98.5 5.1E-06 1.7E-10 82.9 18.6 142 95-263 5-151 (310)
24 2gup_A ROK family protein; sug 98.4 1.8E-05 6E-10 77.6 20.6 246 98-457 5-255 (292)
25 2e2o_A Hexokinase; acetate and 98.2 0.0001 3.6E-09 72.3 20.5 255 99-456 4-266 (299)
26 1zbs_A Hypothetical protein PG 98.0 5.1E-05 1.7E-09 74.7 12.8 124 99-262 2-126 (291)
27 1woq_A Inorganic polyphosphate 98.0 0.00018 6.2E-09 69.7 16.4 147 94-263 9-160 (267)
28 1zxo_A Conserved hypothetical 97.9 1.3E-05 4.4E-10 79.0 6.4 136 99-289 2-138 (291)
29 1sz2_A Glucokinase, glucose ki 97.9 0.00061 2.1E-08 68.1 18.3 264 96-454 13-293 (332)
30 1saz_A Probable butyrate kinas 97.8 0.00086 2.9E-08 68.7 18.5 55 399-456 269-323 (381)
31 3epq_A Putative fructokinase; 97.6 0.00051 1.7E-08 68.2 13.6 242 98-457 4-252 (302)
32 1zc6_A Probable N-acetylglucos 97.6 0.00079 2.7E-08 66.4 14.6 124 98-262 12-139 (305)
33 3lm2_A Putative kinase; struct 96.7 0.0058 2E-07 58.3 9.4 122 96-262 5-129 (226)
34 2p3r_A Glycerol kinase; glycer 94.3 0.091 3.1E-06 55.6 8.3 64 95-161 1-67 (510)
35 3ifr_A Carbohydrate kinase, FG 93.9 0.1 3.4E-06 55.3 7.6 62 96-160 6-70 (508)
36 4e1j_A Glycerol kinase; struct 93.5 0.19 6.5E-06 53.3 8.9 61 98-161 27-90 (520)
37 3h3n_X Glycerol kinase; ATP-bi 93.4 0.24 8E-06 52.4 9.5 61 98-161 6-69 (506)
38 2dpn_A Glycerol kinase; thermu 93.4 0.24 8.1E-06 52.1 9.5 61 98-161 3-66 (495)
39 3g25_A Glycerol kinase; IDP007 93.1 0.26 8.8E-06 52.0 9.2 61 98-161 7-70 (501)
40 3hz6_A Xylulokinase; xylulose, 93.1 0.17 5.8E-06 53.6 7.8 57 98-157 6-65 (511)
41 2itm_A Xylulose kinase, xylulo 93.1 0.23 7.7E-06 52.1 8.6 59 99-160 2-63 (484)
42 2d4w_A Glycerol kinase; alpha 92.7 0.24 8.1E-06 52.2 8.2 61 98-161 3-66 (504)
43 3l0q_A Xylulose kinase; xlylul 92.5 0.17 5.7E-06 54.1 6.8 61 98-161 6-69 (554)
44 3ll3_A Gluconate kinase; xylul 92.5 0.24 8.1E-06 52.3 7.9 60 98-160 5-67 (504)
45 3ezw_A Glycerol kinase; glycer 92.3 0.2 7E-06 53.1 7.1 65 94-161 1-68 (526)
46 2zf5_O Glycerol kinase; hypert 92.3 0.24 8.3E-06 52.0 7.6 60 98-160 4-66 (497)
47 2w40_A Glycerol kinase, putati 92.1 0.31 1.1E-05 51.3 8.2 59 98-159 5-66 (503)
48 3jvp_A Ribulokinase; PSI-II, N 91.5 0.35 1.2E-05 51.9 7.8 61 98-161 6-81 (572)
49 2uyt_A Rhamnulokinase; rhamnos 87.7 1.6 5.3E-05 45.6 9.1 76 98-184 5-91 (489)
50 3h6e_A Carbohydrate kinase, FG 87.3 0.59 2E-05 49.2 5.5 57 98-157 7-65 (482)
51 3i8b_A Xylulose kinase; strain 82.2 2.5 8.5E-05 44.6 7.6 53 98-156 6-59 (515)
52 3djc_A Type III pantothenate k 73.5 3.6 0.00012 39.8 5.2 50 98-161 3-52 (266)
53 4gni_A Putative heat shock pro 68.4 23 0.00078 35.4 10.1 34 207-242 164-197 (409)
54 3bex_A Type III pantothenate k 67.3 5.9 0.0002 37.8 5.1 47 98-153 4-50 (249)
55 3h1q_A Ethanolamine utilizatio 66.5 65 0.0022 29.8 12.3 29 211-241 110-138 (272)
56 3qfu_A 78 kDa glucose-regulate 64.5 35 0.0012 33.6 10.5 32 208-241 168-199 (394)
57 3i33_A Heat shock-related 70 k 63.7 31 0.001 34.3 9.9 32 208-241 173-204 (404)
58 2h3g_X Biosynthetic protein; p 53.9 19 0.00067 34.6 6.1 46 99-153 2-47 (268)
59 4bc3_A Xylulose kinase; transf 49.9 34 0.0012 36.0 7.8 31 98-131 11-41 (538)
60 4b9q_A Chaperone protein DNAK; 38.7 1.5E+02 0.005 31.6 10.7 124 97-256 2-199 (605)
61 2fsj_A Hypothetical protein TA 37.1 46 0.0016 32.7 6.0 52 95-155 188-239 (346)
62 1hux_A Activator of (R)-2-hydr 35.7 23 0.0008 33.7 3.5 49 393-454 185-233 (270)
63 3mdq_A Exopolyphosphatase; str 35.6 88 0.003 30.4 7.7 61 98-158 5-67 (315)
64 3hi0_A Putative exopolyphospha 34.4 88 0.003 32.7 7.9 73 82-156 2-76 (508)
65 2ych_A Competence protein PILM 34.2 53 0.0018 32.1 5.9 31 207-239 151-181 (377)
66 3nuw_A 2-OXO-3-deoxygalactonat 30.6 37 0.0013 33.3 3.9 51 98-156 7-57 (295)
67 4ehu_A Activator of 2-hydroxyi 29.1 34 0.0012 32.2 3.3 36 227-262 75-111 (276)
68 3t69_A Putative 2-dehydro-3-de 28.4 46 0.0016 33.2 4.2 53 98-157 8-60 (330)
69 3tai_A DNA double-strand break 27.5 63 0.0022 33.4 5.0 48 51-103 24-71 (471)
70 1t6c_A Exopolyphosphatase; alp 27.4 1.1E+02 0.0038 29.8 6.8 61 98-158 13-75 (315)
71 3qfu_A 78 kDa glucose-regulate 25.8 89 0.003 30.6 5.9 25 95-119 204-228 (394)
72 3d2f_A Heat shock protein homo 25.4 84 0.0029 34.1 6.0 23 97-119 197-219 (675)
73 1mul_A NS2, HU-2, DNA binding 23.7 1.3E+02 0.0043 23.5 5.3 35 40-74 5-39 (90)
74 2kho_A Heat shock protein 70; 22.8 1.4E+02 0.0048 31.8 7.0 22 96-117 187-208 (605)
75 1p71_A DNA-binding protein HU; 22.5 1.3E+02 0.0044 23.7 5.2 35 40-74 5-39 (94)
76 1b8z_A Protein (histonelike pr 22.1 1.3E+02 0.0046 23.3 5.2 35 40-74 5-39 (90)
77 3rhi_A DNA-binding protein HU; 21.8 1.3E+02 0.0043 23.7 5.0 35 40-74 8-42 (93)
78 4gni_A Putative heat shock pro 21.6 1E+02 0.0036 30.5 5.5 23 97-119 205-227 (409)
79 2o97_B NS1, HU-1, DNA-binding 21.5 1.3E+02 0.0044 23.5 5.0 35 40-74 5-39 (90)
80 3i33_A Heat shock-related 70 k 21.3 1.1E+02 0.0036 30.3 5.4 24 96-119 213-236 (404)
81 3c4i_A DNA-binding protein HU 21.1 1.4E+02 0.0048 23.8 5.2 35 40-74 5-39 (99)
82 1hjr_A Holliday junction resol 20.8 1.6E+02 0.0056 25.8 5.9 57 98-156 2-58 (158)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=1.3e-126 Score=1004.53 Aligned_cols=420 Identities=27% Similarity=0.484 Sum_probs=387.8
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEE
Q 038487 38 TQTILRKFARECATPVPRLWQVANALVSEMQASLASNE--TTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCAR 115 (472)
Q Consensus 38 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~--~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~ 115 (472)
+.+.++++.++|.++.++|++|+++|.+||++||++++ .| +++||||||+.+|+|+|+|+|||||||||||||++|+
T Consensus 17 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s-~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 17 KKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEA-SVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTC-SSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCC-CcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 44555566667779999999999999999999999764 35 8999999999999999999999999999999999999
Q ss_pred eCCCC--ccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEe
Q 038487 116 LGGKN--EPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAI 193 (472)
Q Consensus 116 L~g~~--~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li 193 (472)
|.|++ .+..++.+++|+||+++|.+++++||||||+||++|+++++. .++++||||||||||+|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~-----~~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQM-----KHKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTC-----SSSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccc-----cccccceEEEEeccccccCCCceEEE
Confidence 97764 234556677999999999999999999999999999998764 24679999999999999999999999
Q ss_pred ee-cccccCCCCCchHHHHHHHHHHhcC-CCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCC
Q 038487 194 KW-KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQ 271 (472)
Q Consensus 194 ~w-KgF~~~~v~G~dv~~lL~~al~r~~-l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~ 271 (472)
+| |||++++++|+||+++|++||+|++ ++|+|+||+|||||||||++|.+++|.||+|+|||||+||+|++++|+|++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 99 9999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeeccCCCCCCC---CCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCC
Q 038487 272 GPSPKSGEIVISTEWGNFSSSS---FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPP 348 (472)
Q Consensus 272 ~~~~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~ 348 (472)
+ ..++||||||||+||+++ +|+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||++..|+
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~ 327 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASE 327 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCT
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcH
Confidence 6 467899999999999765 5799999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccC--
Q 038487 349 KLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIE-- 426 (472)
Q Consensus 349 ~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~-- 426 (472)
+|.+||+|+|++||.|++|++++ ..++.+|++ ++++ ++.+|+++||+||++|++|||+|+||+|+||++|+++..
T Consensus 328 ~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~ 404 (470)
T 3f9m_A 328 QLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSE 404 (470)
T ss_dssp TTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999888 888999876 9996 667999999999999999999999999999999998642
Q ss_pred -ccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEecCC
Q 038487 427 -LKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPSHG 472 (472)
Q Consensus 427 -~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~~D 472 (472)
..+++||||||+|++||.|++++++++++|++ .++|.+.+++|
T Consensus 405 ~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~D 448 (470)
T 3f9m_A 405 DVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEE 448 (470)
T ss_dssp SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSS
T ss_pred cccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCC
Confidence 24599999999999999999999999999994 35899999998
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-122 Score=964.31 Aligned_cols=411 Identities=30% Similarity=0.485 Sum_probs=381.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCCCCc
Q 038487 42 LRKFARECATPVPRLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGKNE 121 (472)
Q Consensus 42 l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g~~~ 121 (472)
++++.++|.++.++|++|+++|..||++||+.++ | +++||||||+++|+|+|+|+|||||||||||||++|+|.|+
T Consensus 6 ~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s-~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 6 LEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-S-SLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-C-SSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-C-CCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 4455555669999999999999999999999875 5 79999999999999999999999999999999999999764
Q ss_pred cceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeee-ccccc
Q 038487 122 PISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW-KNFAA 200 (472)
Q Consensus 122 ~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~w-KgF~~ 200 (472)
....+++|+||+++|.+++++||||||+||++|+++++. .++++||||||||||+|+++++|+|++| |||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~-----~~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGL-----SGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTC-----TTCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCc-----ccccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 344556899999999999999999999999999998653 2467999999999999999999999999 99999
Q ss_pred CCCCCchHHHHHHHHHHhc-CCCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCCCCCCCCCc
Q 038487 201 NDTVEETLVTNINQALAKH-DLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGE 279 (472)
Q Consensus 201 ~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~ 279 (472)
++++|+||+++|++|++|+ +++|+|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++ ..++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999976 4578
Q ss_pred EEEeeccCCCCCCCC---CCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcC
Q 038487 280 IVISTEWGNFSSSSF---PVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYLL 356 (472)
Q Consensus 280 miINtEwG~fg~~~l---p~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~~ 356 (472)
||||||||+||++++ |+|+||+++|++|.|||+|+||||+||||||||+|+||++|++++.||++..|++|.++|+|
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l 311 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIF 311 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCS
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCC
Confidence 999999999998764 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccC---ccceEEE
Q 038487 357 RPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIE---LKKSVVN 433 (472)
Q Consensus 357 ~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~---~~~~~V~ 433 (472)
+|++||+|++|++ ++..+..+|++ |++ +++.+|+++||+||++|++|||+|+||+|+||++|+++.. ..+++||
T Consensus 312 ~T~~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~Vg 388 (445)
T 3hm8_A 312 KTKFLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVG 388 (445)
T ss_dssp CHHHHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CcHHHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEE
Confidence 9999999999854 68888999977 999 5899999999999999999999999999999999997632 2479999
Q ss_pred EecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEecCC
Q 038487 434 VEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPSHG 472 (472)
Q Consensus 434 vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~~D 472 (472)
+|||+|++||.|++++++++++|+|+ ++|++.+++|
T Consensus 389 vDGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~D 424 (445)
T 3hm8_A 389 VDGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSED 424 (445)
T ss_dssp EECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSS
T ss_pred EeceehccChhHHHHHHHHHHHhCCC---CcEEEEECCC
Confidence 99999999999999999999999874 5899999998
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=9.5e-119 Score=950.35 Aligned_cols=427 Identities=23% Similarity=0.442 Sum_probs=397.9
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEE
Q 038487 35 WKQTQTILRKFARECATPVPRLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCA 114 (472)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V 114 (472)
..++.+.+++++++|.++.++|++|+++|.+||++||++++ + +++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 20 ~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~-~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V 97 (485)
T 3o8m_A 20 PANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-G-NIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97 (485)
T ss_dssp CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-C-SSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-C-CCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEE
Confidence 34678888899999999999999999999999999999874 4 799999999999999999999999999999999999
Q ss_pred EeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEee
Q 038487 115 RLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIK 194 (472)
Q Consensus 115 ~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~ 194 (472)
+|.|++. .+...++|+||++++.+++++||||||+||++|+++++... .++.+++|||||||++|+++++|+|++
T Consensus 98 ~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~ 172 (485)
T 3o8m_A 98 KLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQR 172 (485)
T ss_dssp EEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECC
T ss_pred EECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEee
Confidence 9977642 33345689999999999999999999999999999875321 246799999999999999999999999
Q ss_pred e-cccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCCC-
Q 038487 195 W-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQG- 272 (472)
Q Consensus 195 w-KgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~- 272 (472)
| |||++++++|+||+++|+++++|+|++|+|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++
T Consensus 173 wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~ 252 (485)
T 3o8m_A 173 WTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGL 252 (485)
T ss_dssp CCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTT
T ss_pred ccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecccccccccc
Confidence 9 99999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred ---CCCCCCcEEEeeccCCCCCC--CCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCC
Q 038487 273 ---PSPKSGEIVISTEWGNFSSS--SFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVP 347 (472)
Q Consensus 273 ---~~~~~~~miINtEwG~fg~~--~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~ 347 (472)
..+.+++||||||||+||+. .+|+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||++..|
T Consensus 253 ~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~ 332 (485)
T 3o8m_A 253 LPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDI 332 (485)
T ss_dssp CCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCC
T ss_pred ccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCc
Confidence 23445689999999999875 4899999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCc
Q 038487 348 PKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIEL 427 (472)
Q Consensus 348 ~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~ 427 (472)
++|.++|+|+|++||+|++|+++++..+..+|++.|+++ ++.+|+++||+||++|++|||+|+||+|+||+++++.
T Consensus 333 ~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~--- 408 (485)
T 3o8m_A 333 SKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY--- 408 (485)
T ss_dssp GGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 999999999999999999999999999999999999996 8999999999999999999999999999999999987
Q ss_pred cceEEEEecceeeecHhHHHHHHHHHHHHhCCCC----CCcEEEEecCC
Q 038487 428 KKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNEL----SDNVIVEPSHG 472 (472)
Q Consensus 428 ~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~----~~~i~~~~~~D 472 (472)
+.++||||||+|++||.|++++++++++++++.. .++|++.+++|
T Consensus 409 ~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~D 457 (485)
T 3o8m_A 409 KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAED 457 (485)
T ss_dssp SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCC
T ss_pred CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCC
Confidence 6799999999999999999999999999997533 46899999998
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=6.8e-105 Score=842.10 Aligned_cols=422 Identities=29% Similarity=0.500 Sum_probs=392.1
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcc--CCCCCccccccccCccCCCCcccccEEEEEeCCCeeEEEE
Q 038487 36 KQTQTILRKFARECATPVPRLWQVANALVSEMQASLAS--NETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILC 113 (472)
Q Consensus 36 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~--~~~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~ 113 (472)
+.+.+.+++|.+.|.++.++|++|+++|.+||++||+. +..| +++||||||+++|+|+|+|.|||||||||||||++
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s-~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 6 QQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKS-SIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTC-SCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCC-cccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 34567788899999999999999999999999999983 2245 89999999999999999999999999999999999
Q ss_pred EEeCC-CCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEE
Q 038487 114 ARLGG-KNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSA 192 (472)
Q Consensus 114 V~L~g-~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~L 192 (472)
|++.| ++. .+...++|+||.+++.+++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99987 432 2333468999999999999999999999999999987532 345999999999999999999999
Q ss_pred eee-cccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCC
Q 038487 193 IKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQ 271 (472)
Q Consensus 193 i~w-KgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~ 271 (472)
++| |||++++++|+||+++|+++++|+++||+|+||+|||||||++++|.+++|.||+|+|||+|+||+|+.++|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeeccCCCCCCC---CCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCC
Q 038487 272 GPSPKSGEIVISTEWGNFSSSS---FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPP 348 (472)
Q Consensus 272 ~~~~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~ 348 (472)
+. ..+.|+||+|||.||+++ +|+|+||.++|..|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|+
T Consensus 238 g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~ 315 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPE 315 (451)
T ss_dssp SC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCS
T ss_pred CC--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchH
Confidence 73 457899999999999875 8999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCcc
Q 038487 349 KLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELK 428 (472)
Q Consensus 349 ~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~ 428 (472)
++.+++.|+|++||+|++|+++++..++.++++.++++.++.+|++++|.+|.+|.+|||+++|++|+||+++++. +
T Consensus 316 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~---~ 392 (451)
T 1bdg_A 316 RLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR---S 392 (451)
T ss_dssp GGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---S
T ss_pred hhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---C
Confidence 9999999999999999999999999999999887898766999999999999999999999999999999999986 6
Q ss_pred ceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEecCC
Q 038487 429 KSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPSHG 472 (472)
Q Consensus 429 ~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~~D 472 (472)
+++|++|||+|++||.|++++++++++++++ ..+|.+.+++|
T Consensus 393 ~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~d 434 (451)
T 1bdg_A 393 EVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSED 434 (451)
T ss_dssp EEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTT
T ss_pred ceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCC
Confidence 7899999999999999999999999999877 45899998877
No 5
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=7.6e-100 Score=803.69 Aligned_cols=415 Identities=16% Similarity=0.216 Sum_probs=381.7
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCCC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGK 119 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g~ 119 (472)
+.+++|.++|.++.++|++|+++|.+||+ ||+.++ | +++||||||+.+|+|+|+|.|||||+|||||||++|++.|+
T Consensus 7 ~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~-~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 7 SLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-A-SIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-C-SSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-C-CCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 55667777778999999999999999999 998764 5 79999999999999999999999999999999999999775
Q ss_pred CccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeee-ccc
Q 038487 120 NEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW-KNF 198 (472)
Q Consensus 120 ~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~w-KgF 198 (472)
.. .+...+++++|.++|.+++++||||||+||.+|+++++.. ..+.+++|||||||+.|+++++|+|++| |||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 32 2334468999999999999999999999999999875421 1356899999999999999999999999 999
Q ss_pred ccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCCCCC-C-C
Q 038487 199 AANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPS-P-K 276 (472)
Q Consensus 199 ~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~-~-~ 276 (472)
++++++ ||+++|+++++|++++++|++|+|||+||+++.+|.++++.||+|+|||+|+||+++.++|+|+++.. + .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999997531 2 3
Q ss_pred CCcEEEeeccCCCCCCC--CCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCC
Q 038487 277 SGEIVISTEWGNFSSSS--FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPY 354 (472)
Q Consensus 277 ~~~miINtEwG~fg~~~--lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~ 354 (472)
.+.|+||||||+|++++ +|+|+||+++|..|.||| |+||||+||||||||+|++|++|.+++.+|++ .|++|.++|
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~ 313 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAAN 313 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTT
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhccccc
Confidence 67899999999999654 899999999999999999 99999999999999999999999999999999 999999999
Q ss_pred cCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEE
Q 038487 355 LLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNV 434 (472)
Q Consensus 355 ~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~v 434 (472)
+|+|++||.|++|+++++..++.+|.+.++++ ++.+|+++||+||++|++|||+|+|++|+||+++++. ++++|++
T Consensus 314 ~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~---~~~~V~v 389 (457)
T 2yhx_A 314 VENTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY---SSGHIAA 389 (457)
T ss_dssp CSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC---SSEEEEE
T ss_pred CcChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CcEEEEE
Confidence 99999999999999899999999998889996 6999999999999999999999999999999999986 5689999
Q ss_pred ecceeeecHhHHHHHHHHHHHHhCCCC----CCcEEEEecCC
Q 038487 435 EGGLYEHYRIFRNYLHSSVWEMLGNEL----SDNVIVEPSHG 472 (472)
Q Consensus 435 dGS~~~~~p~y~~~l~~~l~~l~~~~~----~~~i~~~~~~D 472 (472)
|||+ ++||.|++++++++++|++++. .++|++.+++|
T Consensus 390 dGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d 430 (457)
T 2yhx_A 390 XGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID 430 (457)
T ss_dssp ESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC
T ss_pred ECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC
Confidence 9999 9999999999999999998753 56899999998
No 6
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.2e-98 Score=853.59 Aligned_cols=417 Identities=28% Similarity=0.476 Sum_probs=379.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC--CCCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCC
Q 038487 41 ILRKFARECATPVPRLWQVANALVSEMQASLASN--ETTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGG 118 (472)
Q Consensus 41 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~--~~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g 118 (472)
.++++.++|.++.++|++|+++|++||++||+.+ ..| +++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 469 ~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~-~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 469 QIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNA-VVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTC-SSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCC-CCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 3455555667999999999999999999999864 235 7999999999999999999999999999999999999974
Q ss_pred CCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeee-cc
Q 038487 119 KNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW-KN 197 (472)
Q Consensus 119 ~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~w-Kg 197 (472)
++..+.++..++|+||.++|.+++++||||||+||.+|+++++.. .+.+||||||||||+|+++++|.|++| ||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 433356566678999999999999999999999999999976532 356899999999999999999999999 99
Q ss_pred cccCCCCCchHHHHHHHHHHhc-CCCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCCCCCCC
Q 038487 198 FAANDTVEETLVTNINQALAKH-DLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPK 276 (472)
Q Consensus 198 F~~~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~ 276 (472)
|++++++|+||+++|+++++|+ +++|+|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+++.+ .
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999875 4
Q ss_pred CCcEEEeeccCCCCCCC---CCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCC
Q 038487 277 SGEIVISTEWGNFSSSS---FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMP 353 (472)
Q Consensus 277 ~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~ 353 (472)
.+.|+||||||+||+++ +|+|+||+++|+.|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|++|.++
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~ 779 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTR 779 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccC
Confidence 57899999999999865 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccC---ccce
Q 038487 354 YLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIE---LKKS 430 (472)
Q Consensus 354 ~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~---~~~~ 430 (472)
+.|+|++||+|++|++ ++..++.+++. ++++ ++.+|++++|+||++|++|||+|+|++|+||+++++.+. ..++
T Consensus 780 ~~~~t~~ls~ie~d~~-~~~~~~~i~~~-~~~~-~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~~~~~~~ 856 (917)
T 1cza_N 780 GIFETKFLSQIESDRL-ALLQVRAILQQ-LGLN-STCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNV 856 (917)
T ss_dssp TCSCHHHHHHHTCSSC-CHHHHHHHHHH-HTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred CccchHHhhhhhcCcc-hhhHHHHHHHH-hCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCccce
Confidence 9999999999999987 57778888875 8984 799999999999999999999999999999999986521 1348
Q ss_pred EEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEecCC
Q 038487 431 VVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPSHG 472 (472)
Q Consensus 431 ~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~~D 472 (472)
+|++|||+|++||.|+++++++++++.+. .+|.|.+++|
T Consensus 857 ~V~vdGsv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~d 895 (917)
T 1cza_N 857 TVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSED 895 (917)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSS
T ss_pred EEEECCHHHHcCcHHHHHHHHHHHHhCCC---CceEEEEecC
Confidence 99999999999999999999999999853 4799999987
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=7.2e-83 Score=724.23 Aligned_cols=420 Identities=28% Similarity=0.498 Sum_probs=378.2
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEE
Q 038487 38 TQTILRKFARECATPVPRLWQVANALVSEMQASLASNE--TTTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCAR 115 (472)
Q Consensus 38 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~--~s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~ 115 (472)
+.+.+++|.++|.++.++|++|+++|.+||++||+.++ .| +++||||||+++|+|+|+|.|||||+|||||||++|+
T Consensus 18 ~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s-~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 18 QVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTA-TVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGC-SSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCC-cccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 34457788888889999999999999999999998754 35 7999999999999999999999999999999999999
Q ss_pred eCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeee
Q 038487 116 LGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW 195 (472)
Q Consensus 116 L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~w 195 (472)
+.|++...++...+++++|.+++.+++++||||||+||.+|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 976533333334558999998888899999999999999999875421 245799999999999999999999999
Q ss_pred -cccccCCCCCchHHHHHHHHHHhcC-CCceEEEEEecchhhhhccccCCCCceEEEEeCCccceeeecccCCCCCCCCC
Q 038487 196 -KNFAANDTVEETLVTNINQALAKHD-LNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNAAYVESSQAVPKWQGP 273 (472)
Q Consensus 196 -KgF~~~~v~G~dv~~lL~~al~r~~-l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~ 273 (472)
|||++++++|+||+++|+++++|++ +++++++|+|||+||+++.+|.++++.||+|+|||+|+||+++..+|+++.+
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G- 250 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG- 250 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSC-
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccC-
Confidence 9999999999999999999999997 8999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcEEEeeccCCCCCCC---CCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCc
Q 038487 274 SPKSGEIVISTEWGNFSSSS---FPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKL 350 (472)
Q Consensus 274 ~~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l 350 (472)
..+.|+||+|||.|++++ +|+|+||..+|..+.|||+|+||||+||+||||++|+++.++.+++.+|.+..|+.+
T Consensus 251 --~~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l 328 (917)
T 1cza_N 251 --DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPEL 328 (917)
T ss_dssp --CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTT
T ss_pred --CCCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhh
Confidence 256799999999998765 369999999999999999999999999999999999999999998889988888899
Q ss_pred CCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccC---c
Q 038487 351 MMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIE---L 427 (472)
Q Consensus 351 ~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~---~ 427 (472)
.+++.|+++++|+++ ++++++..+..+++. ++++ ++..|++.++.+|..|.+|+|+++|++|++|+.++++++ .
T Consensus 329 ~~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~~~ 405 (917)
T 1cza_N 329 LTRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPR 405 (917)
T ss_dssp TSTTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred ccccccChHHHHHHh-cccccHHHHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccC
Confidence 999999999999999 557788888888876 8885 799999999999999999999999999999999984322 1
Q ss_pred cceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEecCC
Q 038487 428 KKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPSHG 472 (472)
Q Consensus 428 ~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~~D 472 (472)
.+.+|+++||+|++||.|+++++++++++++. .+++|.+++|
T Consensus 406 ~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~---~~~~i~~a~d 447 (917)
T 1cza_N 406 LRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSES 447 (917)
T ss_dssp EEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTT
T ss_pred cceEEEECCchhhccHHHHHHHHHHHHHhcCC---CceEEEEecc
Confidence 34899999999999999999999999999843 4799998876
No 8
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.29 E-value=3.1e-10 Score=113.22 Aligned_cols=278 Identities=18% Similarity=0.170 Sum_probs=167.9
Q ss_pred ccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCcccccccee
Q 038487 97 GLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGY 176 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGf 176 (472)
+.+|++|+|||++|++++.+.|. +..+. .++.|.. .+.+++++.+++.|.+++++.+.. ..-.+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~------~~~i~~i 71 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMK------KEDFVGI 71 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCC------GGGEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCC------ccceeEE
Confidence 46899999999999999999763 33322 3444432 345789999999999999876421 1223455
Q ss_pred EEeee--eecccCCCcEEeeecccccCCCCCc-hHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEE
Q 038487 177 TWSHS--VDQVTTLSPSAIKWKNFAANDTVEE-TLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAA 249 (472)
Q Consensus 177 TFSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~-dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iG 249 (472)
.+|.| ++. ++|+++.--.+.. .+. ++.+.|++.+ ++| +.|.||+.+..++-.+ .+.+..+.
T Consensus 72 gi~~pG~vd~---~~g~v~~~~~l~w---~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~ 139 (326)
T 2qm1_A 72 GMGTPGSVDI---EKGTVVGAYNLNW---TTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIF 139 (326)
T ss_dssp EEEESSEEET---TTTEEECBGGGTB---CSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEE
T ss_pred EEecccceeC---CCCEEEecCCCCc---cCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEE
Confidence 55555 542 3466542243432 345 8888888876 444 4689999998877543 35578899
Q ss_pred EEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHH
Q 038487 250 VTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVR 329 (472)
Q Consensus 250 lIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivR 329 (472)
+++|||..++++..-.-+ .+.. -.--|||.. +. |.. .....-.....+|.+.||..|-+.++
T Consensus 140 l~~GtGiG~giv~~G~l~---~G~~------g~aGE~Gh~-----~~---~~~-g~~c~cG~~gcle~~~s~~~l~~~~~ 201 (326)
T 2qm1_A 140 ITLGTGVGGGIVAAGKLL---HGVA------GCAGEVGHV-----TV---DPN-GFDCTCGKRGCLETVSSATGVVRVAR 201 (326)
T ss_dssp EEESSSEEEEEEETTEEC---CCSS------SCTTCGGGS-----BS---CTT-SCBCTTSSBCBTHHHHSHHHHHHHHH
T ss_pred EEECCceEEEEEECCEEe---ecCC------CcccccCcE-----EE---CCC-CCcCCCCCccchHhhhCHHHHHHHHH
Confidence 999999999998642111 1110 001244432 11 100 00001112457899999988766554
Q ss_pred HHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccC-CCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhh
Q 038487 330 RVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQD-TSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAA 408 (472)
Q Consensus 330 lil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d-~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA 408 (472)
..+ .. ...+. .+..+..+ ...+...+.....+ - -..|..+.++++
T Consensus 202 ~~~----~~-----~~~~~-----------~~~~~~~~~~~~~~~~v~~~a~~------g--------d~~a~~i~~~~~ 247 (326)
T 2qm1_A 202 HLS----EE-----FAGDS-----------ELKQAIDDGQDVSSKDVFEFAEK------G--------DHFALMVVDRVC 247 (326)
T ss_dssp HHT----TT-----CCSCC-----------HHHHHHHHTCCCCHHHHHHHHHT------T--------CHHHHHHHHHHH
T ss_pred HHh----hc-----ccccc-----------hhhhccccccCCCHHHHHHHHHc------C--------CHHHHHHHHHHH
Confidence 321 00 00000 01111000 00111111111111 0 145678899999
Q ss_pred HHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHh
Q 038487 409 RLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457 (472)
Q Consensus 409 ~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~ 457 (472)
+..|.+++.++..++. . .|.+.|++.+..+.|.+.+++.+++..
T Consensus 248 ~~L~~~i~~l~~~l~p---~--~IvlgGg~~~~~~~~~~~l~~~l~~~~ 291 (326)
T 2qm1_A 248 FYLGLATGNLGNTLNP---D--SVVIGGGVSAAGEFLRSRVEKYFQEFT 291 (326)
T ss_dssp HHHHHHHHHHHHHHCC---S--EEEEEESGGGGTHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhcCC---C--EEEEcChhhhchHHHHHHHHHHHHHhh
Confidence 9999999999998864 2 588899999988999999999998764
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.23 E-value=2.1e-09 Score=112.11 Aligned_cols=317 Identities=15% Similarity=0.154 Sum_probs=188.8
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC----CC--ccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCC
Q 038487 45 FARECATPVPRLWQVANALVSEMQASLASNET----TT--DLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGG 118 (472)
Q Consensus 45 ~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~----s~--~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g 118 (472)
+.+.+.++..++..+.+.|.+ +||-.+.. |. .-+.+.++. | +.+.+|++|+|||++|++++.+.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 555667899999999998877 56543211 00 011222222 2 346789999999999999999976
Q ss_pred CCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeeeccc
Q 038487 119 KNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKWKNF 198 (472)
Q Consensus 119 ~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~wKgF 198 (472)
. +..+. .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|+++.--.+
T Consensus 130 ~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~~~~l 193 (429)
T 1z05_A 130 E---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVLQMPHY 193 (429)
T ss_dssp C---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEEECSSS
T ss_pred C---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEeecCCC
Confidence 3 33322 344443 246899999999999999876421 12233455555555653 34655421444
Q ss_pred ccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEEeCCccceeeecccCCCCCCCCCC
Q 038487 199 AANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPS 274 (472)
Q Consensus 199 ~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~ 274 (472)
.+ .+.++.+.|++.+ ++| +.|.||+.+..++-.+ .+.+..+.+.+|||..++++..=. + +.+..
T Consensus 194 ~w---~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~-l--~~G~~ 261 (429)
T 1z05_A 194 NV---KNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGR-V--LQGRH 261 (429)
T ss_dssp BC---SSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE-E--CCTTT
T ss_pred CC---CCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCE-E--eeCCC
Confidence 33 3468888888876 455 4689999998877543 355788999999999999986411 1 11110
Q ss_pred CCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCC
Q 038487 275 PKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPY 354 (472)
Q Consensus 275 ~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~ 354 (472)
. .=-|||.. +..+ |- ....--..-.+|...|+..|-+.++..+ ..+ . ++.+.
T Consensus 262 g------~AGEiGH~-----~v~~-~g---~~c~cG~~gclE~~~S~~al~~~~~~~~----~~~-----~-~~~l~--- 313 (429)
T 1z05_A 262 G------NIGELGHI-----QIDP-QG---KRCHCGNYGCLETVASSQAIRDQVTARI----QAG-----E-PSCLA--- 313 (429)
T ss_dssp T------CTTBCTTS-----BCCT-TC---CBCTTSCBSBTHHHHSHHHHHHHHHHHH----HTT-----C-CCTTT---
T ss_pred C------cccccCce-----EEcC-CC---CCCCCCCCcchHHHhCHHHHHHHHHHHh----hcc-----c-ccccc---
Confidence 0 01244432 1100 00 0000011356788888876554443321 111 0 11110
Q ss_pred cCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEE
Q 038487 355 LLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNV 434 (472)
Q Consensus 355 ~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~v 434 (472)
..+..+...+.....+ -+ ..|..+.+++++..|.+++.++..++. + .|.+
T Consensus 314 -----------~~~~~~~~~i~~~a~~------gD--------~~a~~il~~~~~~L~~~i~~l~~~ldP---~--~Ivl 363 (429)
T 1z05_A 314 -----------TVEEISIEDICAAAAD------GD--------PLAVDVIQQLGRYLGAAIAIVINLFNP---E--KILI 363 (429)
T ss_dssp -----------TCSSCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---S--EEEE
T ss_pred -----------cccCCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC---C--EEEE
Confidence 0001112222222111 11 346678899999999999999998764 2 4788
Q ss_pred ecceeeecHhHHHHHHHHHHHH
Q 038487 435 EGGLYEHYRIFRNYLHSSVWEM 456 (472)
Q Consensus 435 dGS~~~~~p~y~~~l~~~l~~l 456 (472)
.|++....+.|.+.+++.+++.
T Consensus 364 gG~i~~~~~~l~~~l~~~l~~~ 385 (429)
T 1z05_A 364 GGVINQAKSILYPSIEQCIREQ 385 (429)
T ss_dssp ESGGGGGHHHHHHHHHHHHHHH
T ss_pred eCccccchHHHHHHHHHHHHHh
Confidence 8999998899999999998876
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.22 E-value=1.6e-09 Score=112.03 Aligned_cols=320 Identities=11% Similarity=0.072 Sum_probs=188.9
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCC---CccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCCCC
Q 038487 44 KFARECATPVPRLWQVANALVSEMQASLASNETT---TDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGKN 120 (472)
Q Consensus 44 ~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s---~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g~~ 120 (472)
++.+.+.++..++..+.++|.+ .||-.+... .+.---|+.+.--| +.+.+|++|+|||++|++++.+.|.
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4566677999999999998877 566433110 00011111111112 3467899999999999999999763
Q ss_pred ccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecccCCCcEEeee-cccc
Q 038487 121 EPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQVTTLSPSAIKW-KNFA 199 (472)
Q Consensus 121 ~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt~l~~g~Li~w-KgF~ 199 (472)
+.... .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|+++ + ..+
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMPFY- 170 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECTTC-
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCCCC-
Confidence 33322 334432 245789999999999999875421 12223455555555653 357766 4 444
Q ss_pred cCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEEeCCccceeeecccCCCCCCCCCCC
Q 038487 200 ANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSP 275 (472)
Q Consensus 200 ~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~ 275 (472)
++..+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+.+.+|||..++++.+=.- +.+.
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l---~~G~-- 238 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHL---LHAG-- 238 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEE---TTTT--
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEE---eecC--
Confidence 1223678889998877 455 4689999998877543 3557889999999999999864111 1110
Q ss_pred CCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCc
Q 038487 276 KSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYL 355 (472)
Q Consensus 276 ~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~ 355 (472)
--.--|||..- ..+ |- ....-...-.+|...||..|-+.++..+.. .+ +..+
T Consensus 239 ----~g~AGEiGh~~-----v~~-~g---~~c~cG~~gclE~~~S~~al~~~~~~~~~~------~~----~~~~----- 290 (406)
T 1z6r_A 239 ----SSSLVEIGHTQ-----VDP-YG---KRCYCGNHGCLETIASVDSILELAQLRLNQ------SM----SSML----- 290 (406)
T ss_dssp ----SSCCBCGGGSB-----SCT-TS---CBCTTSCBSBTHHHHSHHHHHHHHHHHHTT------CT----TCGG-----
T ss_pred ----CCcCccCCceE-----ecC-CC---CCCCCCCccchHHHcCHHHHHHHHHHhhhc------cc----cccc-----
Confidence 01123555331 100 00 000011234789899987665544432100 00 0000
Q ss_pred CCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEe
Q 038487 356 LRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVE 435 (472)
Q Consensus 356 ~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vd 435 (472)
..+..+...+.....+ -+ ..|..+.+++++..|.+++.++..++. + .|.+.
T Consensus 291 ----------~~~~~~~~~v~~~a~~------gD--------~~a~~~l~~~~~~L~~~i~~l~~~ldP---~--~Ivlg 341 (406)
T 1z6r_A 291 ----------HGQPLTVDSLCQAALR------GD--------LLAKDIITGVGAHVGRILAIMVNLFNP---Q--KILIG 341 (406)
T ss_dssp ----------GSSCCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---S--EEEEE
T ss_pred ----------CcccCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC---C--EEEEe
Confidence 0001112222222111 11 345678899999999999999998764 2 47788
Q ss_pred cceeeecHhHHHHHHHHHHHH
Q 038487 436 GGLYEHYRIFRNYLHSSVWEM 456 (472)
Q Consensus 436 GS~~~~~p~y~~~l~~~l~~l 456 (472)
|++....+.|.+.+++.+++.
T Consensus 342 G~i~~~~~~l~~~i~~~l~~~ 362 (406)
T 1z6r_A 342 SPLSKAADILFPVISDSIRQQ 362 (406)
T ss_dssp SGGGGGHHHHHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHHHHh
Confidence 999988889999999988876
No 11
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.16 E-value=3.4e-09 Score=108.81 Aligned_cols=310 Identities=15% Similarity=0.126 Sum_probs=180.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC---CCccccccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCCCC
Q 038487 44 KFARECATPVPRLWQVANALVSEMQASLASNET---TTDLNMLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGKN 120 (472)
Q Consensus 44 ~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~---s~~l~MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g~~ 120 (472)
++.+...++..++..+.+++.+ +||=.+.. | +.=-=|+.+.- -.+.+.+|++|+|||++|++++.+.|.
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~-~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPK-GVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMN- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC-----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCC-
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCC-CCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCC-
Confidence 3455556899999999988876 56643211 0 00000111110 123457999999999999999999763
Q ss_pred ccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeee--eecccCCCcEEeeeccc
Q 038487 121 EPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHS--VDQVTTLSPSAIKWKNF 198 (472)
Q Consensus 121 ~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP--~~Qt~l~~g~Li~wKgF 198 (472)
+..+. .++.|.. .+.+++++.+++.|.+++++.+.. ..-.+|+.++.| ++. .+|+++.--.+
T Consensus 110 --vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~------~~~i~gigi~~pG~vd~---~~g~v~~~~~l 173 (380)
T 2hoe_A 110 --ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL------GSKLSALTVAAPGPIDT---ERGIIIDPRNF 173 (380)
T ss_dssp --EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT------TCCCCEEEEEESSCEET---TTTEECCCSSC
T ss_pred --EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC------cCcEEEEEEEeeccEEC---CCCEEeccCCC
Confidence 33322 3444432 246889999999999998764311 112355555655 542 24555421444
Q ss_pred ccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCC--CceEEEEeCCccceeeecccCCCCCCCCCCCC
Q 038487 199 AANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNR--DCVAAVTLGTGTNAAYVESSQAVPKWQGPSPK 276 (472)
Q Consensus 199 ~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~--~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~ 276 (472)
. ..+.++.+.|++.+ ++| +.|.||+.+..++-.+... +..+.+.+|||..++++..-.-+.-..+.
T Consensus 174 ~---w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~--- 241 (380)
T 2hoe_A 174 P---LSQIPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGY--- 241 (380)
T ss_dssp T---TBTSCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSC---
T ss_pred C---CcCCChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCc---
Confidence 2 23568888888876 343 5799999999887544322 78899999999999998641111100110
Q ss_pred CCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcC
Q 038487 277 SGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYLL 356 (472)
Q Consensus 277 ~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~~ 356 (472)
--|||. ++ +|.. ....-.....+|...|+..|-+
T Consensus 242 ------aGEiGh-----~~---v~~~--~~c~cG~~gclE~~~s~~~l~~------------------------------ 275 (380)
T 2hoe_A 242 ------AGEIGY-----TR---VFNG--NEYVFLEDVCNENVVLKHVLSM------------------------------ 275 (380)
T ss_dssp ------CCCGGG-----CE---EECS--SSEEEHHHHHCHHHHHHHHHHH------------------------------
T ss_pred ------cccccc-----eE---ecCC--CCCCCCCccHHHHHcCHHHHHH------------------------------
Confidence 012331 11 1100 0000001235666666533321
Q ss_pred CchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEec
Q 038487 357 RPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEG 436 (472)
Q Consensus 357 ~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdG 436 (472)
+.+.+.+ ...+ -+ ..+..+.+++++..|.+++.++..++. + .|.+.|
T Consensus 276 ~~~~v~~--------------~a~~------gD--------~~a~~~l~~~~~~La~~i~~l~~~ldP---~--~IvlgG 322 (380)
T 2hoe_A 276 GFSSLAE--------------ARDS------GD--------VRVKEYFDDIARYFSIGLLNLIHLFGI---S--KIVIGG 322 (380)
T ss_dssp CCC-TTH--------------HHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---C--EEEEEE
T ss_pred HHHHHHH--------------HHHC------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC---C--EEEEcC
Confidence 0000000 0000 01 235567889999999999999998764 2 477889
Q ss_pred ceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 437 GLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 437 S~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
++....|.|.+.+++.+++..... ..+.+..+
T Consensus 323 ~~~~~~~~l~~~l~~~l~~~~~~~--~~~~i~~s 354 (380)
T 2hoe_A 323 FFKELGENFLKKIKIEVETHLLYK--HSVDMSFS 354 (380)
T ss_dssp GGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEEC
T ss_pred chhhhhHHHHHHHHHHHHHhcCCC--CCcEEEEc
Confidence 998888999999999998875432 24555543
No 12
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.09 E-value=6.2e-08 Score=97.43 Aligned_cols=272 Identities=13% Similarity=0.129 Sum_probs=150.1
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
.+|++|+|||++|++++.+.|. +..+. ..+ |......+.+++++.|++.|.+++++.+.. ...-..|+.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVD-----PLVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCC-----TTCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCC-----cccceeEEE
Confidence 5899999999999999998653 33222 121 222111356889999999999998865321 110234555
Q ss_pred EeeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCC--ceEEEEEecchhhhhccccCCCCceEEEEeCCc
Q 038487 178 WSHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLN--MRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTG 255 (472)
Q Consensus 178 FSFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~--v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTG 255 (472)
++.| +.+..+-...|.+.|+++ ++ ...+.|.||+.+..++ .+ .+..+.+++|||
T Consensus 76 i~~p--------------------G~vd~~~~~~l~~~l~~~-~~~~~~pv~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 76 LSLS--------------------GGDQEDAGRILIEELRDR-FPYLSESYLITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EEET--------------------TTTCHHHHHHHHHHHHHH-CTTSBSCEEEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred Eecc--------------------CCCchHHHHHHHHHHHHh-cCCCCceEEEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 5555 222222222344445443 22 1235699999999998 44 356789999999
Q ss_pred cceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHH
Q 038487 256 TNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRM 335 (472)
Q Consensus 256 tNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~ 335 (472)
.+++.+.+ ++..+-.-+||.+- + |+ .||.|+|........+.
T Consensus 132 ig~~~v~~-------------~G~~c~cG~~G~l~------~------de-------------~s~~~i~~~~~~~~~~~ 173 (347)
T 2ch5_A 132 SNCRLINP-------------DGSESGCGGWGHMM------G------DE-------------GSAYWIAHQAVKIVFDS 173 (347)
T ss_dssp EEEEEECT-------------TSCEEEEECCCTTT------C------CT-------------TSHHHHHHHHHHHHHHH
T ss_pred ceeEEEcC-------------CCCEEecCCcCccc------C------CC-------------ccHHHHHHHHHHHHHHH
Confidence 99987752 23455444555441 1 11 15667775443322221
Q ss_pred HhccCCCCCCCCC-C----cCCCCcCCc--hhhhhhccCCCcChHH----HHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 038487 336 AKEADLFGDTVPP-K----LMMPYLLRP--PDMATMHQDTSEDHEL----VREKLEEVFGITDSTPKAREAVVEVCDIVT 404 (472)
Q Consensus 336 ~~~~~lf~~~~~~-~----l~~~~~~~t--~~ls~i~~d~~~~~~~----~~~il~~~~~~~~~~~~d~~~vr~I~~~V~ 404 (472)
.. +... ...|. . +...+.+.+ ..+..+..+. .... ...+++. ..- - -..|..+.
T Consensus 174 ~d-g~~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~-a~~--g--------D~~a~~il 238 (347)
T 2ch5_A 174 ID-NLEA-APHDIGYVKQAMFHYFQVPDRLGILTHLYRDF--DKCRFAGFCRKIAEG-AQQ--G--------DPLSRYIF 238 (347)
T ss_dssp HH-TSSC-CSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTC--CHHHHHTTHHHHHHH-HHT--T--------CHHHHHHH
T ss_pred Hh-CCCC-CCCCccHHHHHHHHHhCCCCHHHHHHHHhcCC--cHHHHHHHHHHHHHH-HHc--C--------CHHHHHHH
Confidence 11 1100 00000 0 000000000 0010000000 0000 1111111 000 0 14577899
Q ss_pred HHhhHHHHHHHHHHHHHhccc---CccceEEEEecceeeecHhHHHHHHHHHHHHh
Q 038487 405 ERAARLAAAGIVGIIKKLGRI---ELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457 (472)
Q Consensus 405 ~RaA~L~Aa~iaail~~~~~~---~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~ 457 (472)
+|+++..|.+|+.++..++.. ......|.+.|++.+..|.|.+.+++.+++..
T Consensus 239 ~~~~~~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~ 294 (347)
T 2ch5_A 239 RKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGR 294 (347)
T ss_dssp HHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhc
Confidence 999999999999999887642 01224788999999988999999999998874
No 13
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.04 E-value=3.2e-08 Score=99.17 Aligned_cols=285 Identities=18% Similarity=0.195 Sum_probs=169.1
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
.+|++|+|||++|++++.+.|. +..+. .++.| .+.+++++.|++.|.+++++. -..|+.
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~-----------~i~gig 61 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH-----------DVEAVG 61 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC-----------CEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc-----------CceEEE
Confidence 5799999999999999998664 23222 23333 346889999999999987542 235666
Q ss_pred Eeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEE
Q 038487 178 WSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVT 251 (472)
Q Consensus 178 FSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlI 251 (472)
++.| ++. ++|++..--.+. -.+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+.+.
T Consensus 62 i~~pG~vd~---~~g~v~~~~~l~---w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 129 (321)
T 3vgl_A 62 IGAAGYVDD---KRATVLFAPNID---WRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICIT 129 (321)
T ss_dssp EEESSEECT---TSSCEEECSSSC---CEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred EeccccEeC---CCCEEEeCCCCC---CcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEE
Confidence 6666 442 234443212221 23457778888776 454 4689999988777433 4567889999
Q ss_pred eCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHH
Q 038487 252 LGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRV 331 (472)
Q Consensus 252 lGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRli 331 (472)
+|||.-++++.+-.-+ .+... .-.|+|.. +... |- ..-.-...-.+|...||..|-+.++..
T Consensus 130 ~GtGiG~gii~~G~l~---~G~~g------~aGEiGh~-----~v~~-~g---~~c~cG~~gclE~~~S~~al~~~~~~~ 191 (321)
T 3vgl_A 130 LGTGLGGGIIIGNKLR---RGRFG------VAAEFGHI-----RVVP-DG---LLCGCGSQGCWEQYASGRALVRYAKQR 191 (321)
T ss_dssp ESSSEEEEEEETTEEC---CCTTS------CCCCGGGS-----BSST-TC---SBCTTSCBSBGGGTSSHHHHHHHHHHH
T ss_pred eCcceEEEEEECCEEe---cCCCC------CCccccce-----EecC-CC---CCCCCCCcCcHHHhcCHHHHHHHHHHH
Confidence 9999999998742111 11100 01234422 1110 00 000111245789999999887766654
Q ss_pred HHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhcc-C-CCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhH
Q 038487 332 LLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQ-D-TSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAAR 409 (472)
Q Consensus 332 l~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~-d-~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~ 409 (472)
....... +..+..... + +..+...+.+..++ -+ ..|..+.+++++
T Consensus 192 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~a~~------gD--------~~a~~~~~~~~~ 238 (321)
T 3vgl_A 192 ANATPEN-------------------AAVLLGLGDGSVDGIEGKHISEAARQ------GD--------PVAVDSFRELAR 238 (321)
T ss_dssp HHHCGGG-------------------CHHHHHTTTSSSTTCCHHHHHHHHHT------TC--------HHHHHHHHHHHH
T ss_pred hhcCCcc-------------------hhhhhhcccCccccCCHHHHHHHHHc------CC--------HHHHHHHHHHHH
Confidence 4321100 000000000 0 00111222222111 11 356678899999
Q ss_pred HHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhC-CCCCCcEEEEecC
Q 038487 410 LAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLG-NELSDNVIVEPSH 471 (472)
Q Consensus 410 L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~-~~~~~~i~~~~~~ 471 (472)
..|.+|+.++..++. + .|-+.|++.+..+.|.+.+++.+++.+. +.....+.++.++
T Consensus 239 ~La~~i~~l~~~l~p---~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~ 296 (321)
T 3vgl_A 239 WAGAGLADLASLFDP---S--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQ 296 (321)
T ss_dssp HHHHHHHHHHHHHCC---S--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECT
T ss_pred HHHHHHHHHHHHhCC---C--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECC
Confidence 999999999998764 2 5778899999889999999999987663 2222356666553
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.84 E-value=5.5e-07 Score=90.51 Aligned_cols=273 Identities=16% Similarity=0.141 Sum_probs=161.8
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
.+|++|+|||++|++++.+.|. +..+. .++.|.. +.+++++.|.+.|.++..+.+ ...|+.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~----------~~~gig 85 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPTD----DYPLLLETIAGLVAKYDQEFA----------CEGKIG 85 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCTT----CHHHHHHHHHHHHHHHHHHHT----------SCCEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC----------CccEEE
Confidence 5899999999999999998663 33322 4555532 568899999999888876532 235666
Q ss_pred Eeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccC----CCCceEEEE
Q 038487 178 WSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFY----NRDCVAAVT 251 (472)
Q Consensus 178 FSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~----~~~~~iGlI 251 (472)
+|.| ++. .+|++. +-.+. ...+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+.
T Consensus 86 i~~pG~vd~---~~g~v~-~~~~~--~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~ 153 (327)
T 4db3_A 86 LGLPGMEDA---DDATVL-TVNVP--AAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGLI 153 (327)
T ss_dssp EEESEEECT---TTCCEE-ESSSG--GGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEE
T ss_pred EEeeccEeC---CCCEEE-cCCCc--cccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEEE
Confidence 6666 442 245442 21111 123467788888777 455 46899999887776543 457789999
Q ss_pred eCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccch-hh----h-ccCCCCCcceeeeeccccchH
Q 038487 252 LGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDA-SL----D-AESLNPGSMIFEKLVSGMYLG 325 (472)
Q Consensus 252 lGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~-~l----D-~~S~nPg~q~~EKmiSG~YLG 325 (472)
+|||..++++.+-. + +.+... .-.|+|. ++....+. .+ + ....--..-.+|...||..|-
T Consensus 154 ~GtGiG~gii~~G~-l--~~G~~g------~aGEiGh-----~~v~~~~~~~~~~~~~g~~C~cG~~gclE~~~S~~al~ 219 (327)
T 4db3_A 154 LGTGFGGGLIYEGK-V--FSGRNN------VAGELGH-----MRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFE 219 (327)
T ss_dssp ESSSEEEEEEETTE-E--CCCTTS------CTTCGGG-----SBCCHHHHHHTCTTCCCCBCTTSCBSBGGGTSSHHHHH
T ss_pred eCccceEEEEECCE-E--eecCCC------cCccccc-----EEeccccccccccccCCCcCCCCCcchhHhhhCHHHHH
Confidence 99999999987411 1 111100 0123332 22221110 00 0 000111345789999998775
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 038487 326 EIVRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTE 405 (472)
Q Consensus 326 EivRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~ 405 (472)
+.++.. . + + .++ ...+.+...+ | + ..|..+.+
T Consensus 220 ~~~~~~----~------~----~------~~~--------------~~~i~~~a~~--g----D--------~~a~~~~~ 251 (327)
T 4db3_A 220 LLYAHY----Y------G----E------EKK--------------AIDIIKANAA--G----D--------EKAAEHVE 251 (327)
T ss_dssp HHHHHH----H------S----C------CCC--------------HHHHHHHHHH--T----C--------HHHHHHHH
T ss_pred HHHHHh----c------C----C------CCC--------------HHHHHHHHHc--C----C--------HHHHHHHH
Confidence 544321 0 0 0 011 1112222111 1 1 34566888
Q ss_pred HhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 406 RAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 406 RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
++++..|.+|+.++..++. + .|-+.|++.+. +.|.+.+++.+++.+-+.. ..+.|+.+
T Consensus 252 ~~~~~La~~i~~l~~~l~p---~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~-~~~~i~~s 309 (327)
T 4db3_A 252 RFMELLAICFGNIFTANDP---H--VVALGGGLSNF-ELIYEEMPKRVPKYLLSVA-KCPKIIKA 309 (327)
T ss_dssp HHHHHHHHHHHHHHHHHCC---S--EEEEESGGGGC-THHHHHHHHHGGGGSCTTC-CCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCC---C--EEEEeCcccch-HHHHHHHHHHHHHHhcccc-CCCEEEEC
Confidence 9999999999999987764 2 46777888765 6788888888877653322 35666655
No 15
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.83 E-value=1.5e-07 Score=94.17 Aligned_cols=281 Identities=14% Similarity=0.180 Sum_probs=167.9
Q ss_pred cccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Q 038487 94 EEKGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKK 173 (472)
Q Consensus 94 ~E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~ 173 (472)
...+.+|++|+|||++|++++.+.|. +..+. .++.|. ..+.+++++.|.+.|.++++.. . -.
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~---~~~~~~~~~~i~~~i~~~~~~~--------~--~i 77 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTAD---WVNGIGFVESMKLEIGNFLKQY--------P--IV 77 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHH---HHTTTCHHHHHHHHHHHHHHHC--------T--TC
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCC---CCCHHHHHHHHHHHHHHHHhcc--------C--Ce
Confidence 34567999999999999999988653 33322 334332 1345789999999999998621 1 23
Q ss_pred ceeEEeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCce
Q 038487 174 LGYTWSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCV 247 (472)
Q Consensus 174 lGfTFSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~ 247 (472)
.|+.++.| ++ .++|+++..-.+. +..+.++.+.|++.+. ++ .+.|.||..+..++-.+ .+.+..
T Consensus 78 ~gigi~~pG~vd---~~~g~v~~~~~l~--~w~~~~l~~~l~~~~~----~~-pV~v~NDa~aaalaE~~~g~~~~~~~~ 147 (321)
T 3r8e_A 78 KGVGIGWPGLVS---LDRTKVILLPNIP--SVVNVPIVEILRSEFP----HI-HFKIENDAKCAALGEYYFGENKRMQTF 147 (321)
T ss_dssp CEEEEEESSEEC---TTSCCEEEBTTBC--CCCSCCHHHHHHHHCT----TS-EEEEEEHHHHHHHHHHHHSTTTTCSSE
T ss_pred eEEEEEecccEE---CCCCEEEeCCCCc--cccCCCHHHHHHHHcC----CC-CEEEEchHHHHHHHHHHhCCCCCCCcE
Confidence 55566665 43 2355554322221 1234677777776542 33 34699999988766443 356788
Q ss_pred EEEEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHH
Q 038487 248 AAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEI 327 (472)
Q Consensus 248 iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEi 327 (472)
+-+.+|||.-++++.+-.- +.+. --.--|||.. + ..| .-.+|...|+..|-+.
T Consensus 148 v~l~~GtGiG~gii~~G~l---~~G~------~g~aGEiGh~-----~--~~~-----------~gclE~~~S~~al~~~ 200 (321)
T 3r8e_A 148 ILLALGTGVGSGVMMNGKL---FIGG------RGNGTEVGHM-----L--TTR-----------GKSLENQVGINHLIAY 200 (321)
T ss_dssp EEEEESSSEEEEEEETTEE---CCCT------TSCCCCGGGC-----B--CTT-----------SSBSHHHHSHHHHHHH
T ss_pred EEEEECCceEEEEEECCEE---ecCC------CCCCcccccc-----c--CCC-----------CCcHHHhcCHHHHHHH
Confidence 9999999999999874110 1110 0112355533 1 111 4578999999888666
Q ss_pred HHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHh
Q 038487 328 VRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERA 407 (472)
Q Consensus 328 vRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~Ra 407 (472)
++..... .. +..+ . +. ..+..+...+....++ -+ ..|..+.+++
T Consensus 201 ~~~~~~~---~~-------~~~~----~-----~~---~~~~~~~~~i~~~a~~------gD--------~~a~~~~~~~ 244 (321)
T 3r8e_A 201 THEQLAL---DV-------AKKS----S-----LH---TIAELSPKVIADHAAQ------GD--------ALALAVWADI 244 (321)
T ss_dssp HHHHHHH---CT-------TCCC----S-----GG---GCSSCCHHHHHHHHHT------TC--------HHHHHHHHHH
T ss_pred HHHHhhc---cC-------cccc----c-----cc---ccccCCHHHHHHHHHc------CC--------HHHHHHHHHH
Confidence 5543321 00 1100 0 00 0111122222222211 11 3566788999
Q ss_pred hHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 408 ARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 408 A~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
++..|.+|+.++..++. -.|-+.|++.+..+.|.+.+++.+++.+.+.....+.|+.+
T Consensus 245 ~~~La~~i~~l~~~ldP-----~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s 302 (321)
T 3r8e_A 245 GTIIGESLVNIVRVMDL-----NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKA 302 (321)
T ss_dssp HHHHHHHHHHHHHHHCC-----CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHCC-----CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEc
Confidence 99999999999988764 25777899998889999999999988753211124555554
No 16
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.81 E-value=4.6e-07 Score=90.58 Aligned_cols=274 Identities=15% Similarity=0.153 Sum_probs=156.1
Q ss_pred ccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCcccccccee
Q 038487 97 GLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGY 176 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGf 176 (472)
+.+|++|+|||++|++++.+.|. +..+. .++.|.. +.+++++.|.+.+.++..+.. ...|.
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~----------~i~~i 84 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPHT----SYSAFLDAVCELVEEADQRFG----------VKGSV 84 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCS----CHHHHHHHHHHHHHHHHHHHT----------SCCEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC----------CccEE
Confidence 35899999999999999999763 33322 3444432 457888999988888765421 13455
Q ss_pred EEeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccC----CCCceEEE
Q 038487 177 TWSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFY----NRDCVAAV 250 (472)
Q Consensus 177 TFSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~----~~~~~iGl 250 (472)
.++.| ++. ++|+++ +- ..+...+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+
T Consensus 85 gi~~pG~vd~---~~g~v~-~~--~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l 152 (327)
T 2ap1_A 85 GIGIPGMPET---EDGTLY-AA--NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGL 152 (327)
T ss_dssp EEEESSBSCC---TTSCCB-CT--TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEE
T ss_pred EEEeeeeEEC---CCCEEE-cc--CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEE
Confidence 55555 442 235444 10 011224567888888876 344 46999999988775433 45788999
Q ss_pred EeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCcc-ch--hhh---ccCCCCCcceeeeeccccch
Q 038487 251 TLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEF-DA--SLD---AESLNPGSMIFEKLVSGMYL 324 (472)
Q Consensus 251 IlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~-D~--~lD---~~S~nPg~q~~EKmiSG~YL 324 (472)
++|||..++++.+-.-+ .+.. -.--|||. ++..+- +. .++ ....--....+|...|+..|
T Consensus 153 ~~GtGiG~giv~~G~l~---~G~~------g~aGE~Gh-----~~~~~~~~~~~~~~~~g~~c~cG~~gcle~~~s~~~l 218 (327)
T 2ap1_A 153 ILGTGVGGGLVLNGKPI---TGQS------YITGEFGH-----MRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGF 218 (327)
T ss_dssp EESSSEEEEEEETTEEE---CCTT------SCTTCGGG-----SBCCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHH
T ss_pred EECCcEEEEEEECCEEe---ecCC------Cccccccc-----EEEecCcccccccccCCCcCCCCchhhHHHHhCHHHH
Confidence 99999999988641110 1100 00113332 222110 00 000 00011124567888888655
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 038487 325 GEIVRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVT 404 (472)
Q Consensus 325 GEivRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~ 404 (472)
-+.++. .. + . + .+ ...+....++ -+ ..|..+.
T Consensus 219 ~~~~~~----~~------~----~----~--~~--------------~~~i~~~a~~------gd--------~~a~~il 250 (327)
T 2ap1_A 219 AWLYQH----YY------D----Q----S--LQ--------------APEIIALWEQ------GD--------EQAHAHV 250 (327)
T ss_dssp HHHHHH----HH------C----C----C--CC--------------HHHHHHHHHT------TC--------HHHHHHH
T ss_pred HHHHHH----hc------C----C----C--CC--------------HHHHHHHHHc------CC--------HHHHHHH
Confidence 433222 10 0 0 0 01 1111111111 11 3456788
Q ss_pred HHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 405 ERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 405 ~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
+++++..|.+++.++..++. + .|.+.|++....+.|.+ +++.+++.+.+ ....+.++.+
T Consensus 251 ~~~~~~La~~i~~l~~~l~p---~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s 309 (327)
T 2ap1_A 251 ERYLDLLAVCLGNILTIVDP---D--LLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERA 309 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---S--EEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCC---C--EEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEc
Confidence 89999999999999887764 2 47788999887655555 77777665443 2234555554
No 17
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.81 E-value=5.8e-07 Score=90.54 Aligned_cols=287 Identities=15% Similarity=0.135 Sum_probs=161.3
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccce
Q 038487 96 KGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLG 175 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lG 175 (472)
.+.+|++|+|||++|++++.+.|. +.... .++.|. +.+++++.+.+.+.+++++... ...-.+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~------~~~~i~g 92 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNPK-----TYEERINLILQMCVEAAAEAVK------LNCRILG 92 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECCS-----SHHHHHHHHHHHHHHHHHHHHH------TTEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCCC-----CHHHHHHHHHHHHHHHHHhccc------ccCceEE
Confidence 357899999999999999998663 33322 334342 4578889999999998875321 1123456
Q ss_pred eEEeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEE
Q 038487 176 YTWSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAA 249 (472)
Q Consensus 176 fTFSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iG 249 (472)
+.+|.| ++. ++|+++.--.+ .++..+.++.+.|++.+ ++| +.|.||..+..++-.+ ...+..+-
T Consensus 93 igi~~pG~vd~---~~g~v~~~~~~-~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~ 162 (343)
T 2yhw_A 93 VGISTGGRVNP---REGIVLHSTKL-IQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFVT 162 (343)
T ss_dssp EEEEESSEEET---TTTEEEECCTT-SSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEEE
T ss_pred EEEecccCEeC---CCCEEEeCCcC-CCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEE
Confidence 666666 442 34665521111 01123467778888776 454 4689999998887643 24567899
Q ss_pred EEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCC-cceeeeeccccchHHHH
Q 038487 250 VTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPG-SMIFEKLVSGMYLGEIV 328 (472)
Q Consensus 250 lIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg-~q~~EKmiSG~YLGEiv 328 (472)
+++|||..++++..-.- +.+.. -.=-|||.. +. |..- .. -..| ...+|..+|+..|-+.+
T Consensus 163 i~~GtGiG~gii~~G~l---~~G~~------g~aGEiGh~-----~~---~~~g-~~-c~cG~~gclE~~~s~~al~~~~ 223 (343)
T 2yhw_A 163 LITGTGIGGGIIHQHEL---IHGSS------FCAAELGHL-----VV---SLXG-PD-CSCGSHGCIEAYASGMALQREA 223 (343)
T ss_dssp EEESSSEEEEEEETTEE---CCCTT------SCTTCGGGC-----BC---CC---CB-CTTSCBSBHHHHHSHHHHHHHH
T ss_pred EEECCCEEEEEEECCEE---ecCCC------CcccccCCE-----EE---ccCC-Cc-CCCCCCCcHHHhcCHHHHHHHH
Confidence 99999999999864111 11100 011244432 11 1000 00 0112 23689999987775555
Q ss_pred HHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhh
Q 038487 329 RRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAA 408 (472)
Q Consensus 329 Rlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA 408 (472)
+.... .. +..+.. .... .++..+...+.+..++ -+ ..|..+.++++
T Consensus 224 ~~~~~----~~-------~~~~~~-~~~~--------~~~~~~~~~v~~~a~~------gd--------~~a~~il~~~~ 269 (343)
T 2yhw_A 224 KKLHD----ED-------LLLVEG-MSVP--------KDEAVGALHLIQAAKL------GN--------AKAQSILRTAG 269 (343)
T ss_dssp HHHHH----TT-------CSCCTT-CCC------------CCCHHHHHHHHHT------TC--------HHHHHHHHHHH
T ss_pred HHhhc----cc-------cccccc-cccc--------ccccCCHHHHHHHHHc------CC--------HHHHHHHHHHH
Confidence 43221 11 000000 0000 0000111122221111 11 34667889999
Q ss_pred HHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 409 RLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 409 ~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
+..|.+|+.++..++. + .|.+.|++. +.|.+.+++.+++..-+. ...+.+..+
T Consensus 270 ~~La~~i~~l~~~l~P---~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s 322 (343)
T 2yhw_A 270 TALGLGVVNILHTMNP---S--LVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVS 322 (343)
T ss_dssp HHHHHHHHHHHHHTCC---S--EEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEEC
T ss_pred HHHHHHHHHHHHHhCC---C--EEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEc
Confidence 9999999999987754 2 477889985 578888888887754322 124555544
No 18
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=98.77 E-value=5.8e-07 Score=92.24 Aligned_cols=270 Identities=15% Similarity=0.104 Sum_probs=159.1
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHH---HHHHHHhcCCCCCCCCccccc
Q 038487 96 KGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAG---EFAKFVNAHPDNGNDTSAKEK 172 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~---~i~~fl~~~~~~~~~~~~~~l 172 (472)
.+.+|++|+|||++|++++. .|. +..+. ..++.|.. +.+++++.|++ .+.++++ .-
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~------------~~ 66 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP------------EA 66 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS------------SC
T ss_pred CCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh------------cC
Confidence 45789999999999999998 653 22211 13444432 56888888888 6655543 12
Q ss_pred cceeEEeee--eecccCCCcEEeeecccccCCCC-CchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc--------
Q 038487 173 KLGYTWSHS--VDQVTTLSPSAIKWKNFAANDTV-EETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF-------- 241 (472)
Q Consensus 173 ~lGfTFSFP--~~Qt~l~~g~Li~wKgF~~~~v~-G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y-------- 241 (472)
.+|+.+++| ++. ++|++..--.+ ++.. |.|+.+.|++.+ ++| +.|.||.-+..++-.+
T Consensus 67 i~gIGIavPG~Vd~---~~G~i~~~~nl--p~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 67 PVAISFAFPGPADY---QAGIIGDLPNF--PSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CCEEEEECCSSEET---TTTEECCCTTC--GGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHH
T ss_pred CeEEEEEecceEeC---CCCEEEeCCCc--ccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcccc
Confidence 355666665 652 34665422222 1122 568888888877 455 4699999887766433
Q ss_pred ---------CCCCceEEEEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCc
Q 038487 242 ---------YNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGS 312 (472)
Q Consensus 242 ---------~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~ 312 (472)
.+.+..+.+-+|||.-++++..-. + +.+.... -.|+| +++ | .--..
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~-l--~~G~~g~------AGEiG-----H~~----~-------~CG~~ 190 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGE-L--LRGDNAA------GGYVW-----CLR----N-------KKYPE 190 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTE-E--CCCTTSC------TTCCT-----TSB----C-------SSCTT
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCE-E--ecCCCCC------Cceee-----ccc----C-------CCCCC
Confidence 345788999999999999987411 1 1110000 01222 122 2 11224
Q ss_pred ceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHH
Q 038487 313 MIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKA 392 (472)
Q Consensus 313 q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d 392 (472)
-.+|-.+||..|-+..+... + . + -.++ ...+..... ++..-+ +
T Consensus 191 GclE~~~S~~al~~~~~~~~----------~-~-~------~~~~--------------~~~i~~~a~---~~~~gD--~ 233 (366)
T 3mcp_A 191 YIVEESVSIRAVMRVYAERS----------G-D-A------GART--------------PKEIFEIAE---GIRPGN--R 233 (366)
T ss_dssp SBGGGTSSHHHHHHHHHHHS----------S-C-C------SCCC--------------HHHHHHHHH---TSSCSC--H
T ss_pred cceeeeecHHHHHHHHHHhh----------C-C-C------CCCC--------------HHHHHHHHh---hhhcCC--H
Confidence 57899999987765544310 0 0 0 0111 111111111 000011 0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 393 REAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 393 ~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
..|..+.+++++..|.+|+.++..++ + .|-+.|++....+.|.+.+++.+++.+-+....++.+..+
T Consensus 234 -----~~a~~~l~~~~~~Lg~~i~nl~~~ld-----P-~IviGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~s 300 (366)
T 3mcp_A 234 -----EAAIAAFEELGEMAGDALASAITLID-----G-LIVIGGGLSGASKYILPVLLKEMNAQTGMMDGARFGRLQK 300 (366)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHC-----S-EEEEESGGGGGHHHHHHHHHHHHHHHTTCC--------CC
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHC-----C-EEEEEChhhhchHHHHHHHHHHHHHhcchhccCCceEEEe
Confidence 34566788999999999999988774 4 7889999999889999999999998765443445555543
No 19
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.75 E-value=7.6e-07 Score=88.49 Aligned_cols=260 Identities=13% Similarity=0.104 Sum_probs=156.4
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEE
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTW 178 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTF 178 (472)
+|++|+|||++|++++.+.+ +... ..++.|.. +.+++++.|++.+.+++++.. . -..|+.+
T Consensus 3 ~lgiDiGgt~i~~~l~d~~~----~l~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~--~i~gigi 63 (302)
T 3vov_A 3 VVGLDLGGTKIAAGVFDGKR----LLSK--VVVPTPKE----GGERVAEALAEAAERAEREAG-------V--RGEAIGL 63 (302)
T ss_dssp EEEEEECSSEEEEEEECSSS----BSCC--EEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------C--CCSSEEE
T ss_pred EEEEEEcCCEEEEEEEeCCC----cEEE--EEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------C--CceEEEE
Confidence 68999999999999998752 2221 23455532 227899999999999887531 1 2355555
Q ss_pred eee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEEe
Q 038487 179 SHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVTL 252 (472)
Q Consensus 179 SFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlIl 252 (472)
+.| ++. ++|++...-.+ ++..+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+-+.+
T Consensus 64 ~~pG~vd~---~~g~v~~~~~~--~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 64 GTPGPLDF---RRGVIRFAPNI--PGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp EESSCEET---TTTEEC---CC--TTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred EecccEeC---CCCEEEcCCCC--CCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 665 542 34554421322 1223567888888776 344 4689999888766544 34578899999
Q ss_pred CCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHHH
Q 038487 253 GTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVL 332 (472)
Q Consensus 253 GTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil 332 (472)
|||..++++..-. +- .+.... --|+|.. +... | .....-...-.+|...||..|-+.++...
T Consensus 133 GtGiG~gii~~g~-l~--~G~~g~------aGEiGh~-----~v~~-~---g~~c~cg~~gclE~~~s~~~l~~~~~~~~ 194 (302)
T 3vov_A 133 STGIGGGVVLGGR-VL--RGERGQ------GGELGHL-----TLLP-G---GPACGCGLEGCLEALAAGRALERDATYAF 194 (302)
T ss_dssp SSSEEEEEEETTE-EC--CCTTSC------TTCGGGS-----BSST-T---CCBCTTSCBSBHHHHHSHHHHHHHHHHHH
T ss_pred CCceeEEEEECCE-Ee--eCCCCC------Cccccce-----EecC-C---CCCCCCCCcchHHHHhCHHHHHHHHHHhh
Confidence 9999999987411 11 110000 0133322 1110 0 00001112357899999877655443211
Q ss_pred HHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHH
Q 038487 333 LRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAA 412 (472)
Q Consensus 333 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~A 412 (472)
+ . .++.+. +....++ -+ ..|..+.+++++..|
T Consensus 195 ----------~----~------~~~~~~--------------i~~~a~~------gd--------~~a~~~~~~~~~~l~ 226 (302)
T 3vov_A 195 ----------Q----R------PVDTRE--------------LFRLFQA------GD--------PKAERLVLQAARYVG 226 (302)
T ss_dssp ----------T----S------CCCHHH--------------HHHHHHT------TC--------HHHHHHHHHHHHHHH
T ss_pred ----------C----C------CCCHHH--------------HHHHHHc------CC--------HHHHHHHHHHHHHHH
Confidence 0 0 011111 1111111 11 345567889999999
Q ss_pred HHHHHHHHHhcccCccceEEEEeccee-eecHhHHHHHHHHHHHHhCC
Q 038487 413 AGIVGIIKKLGRIELKKSVVNVEGGLY-EHYRIFRNYLHSSVWEMLGN 459 (472)
Q Consensus 413 a~iaail~~~~~~~~~~~~V~vdGS~~-~~~p~y~~~l~~~l~~l~~~ 459 (472)
.+++.++...+. + .|-+.|++. +..+.|.+.+++.+++.+.+
T Consensus 227 ~~i~~l~~~~~p---~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~ 269 (302)
T 3vov_A 227 IGLASLVKAFDP---G--VVVLGGGVALNAPEGYWEALLEAYRRYLQG 269 (302)
T ss_dssp HHHHHHHHHHCC---S--EEEEESHHHHTSCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHCC---C--EEEEeChhHhhhhHHHHHHHHHHHHHhcch
Confidence 999999887754 2 577889999 88899999999999987644
No 20
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.64 E-value=6.5e-07 Score=87.70 Aligned_cols=252 Identities=17% Similarity=0.155 Sum_probs=144.9
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEE
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTW 178 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTF 178 (472)
+|++|+|||++|++++.+.|+ +..+. .++.|.. .+.+++++.|.+.+.+++.+. .-+|+..
T Consensus 3 ~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~-----------~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAHA-----------QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGGC-----------SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhhC-----------CEEEEEe
Confidence 799999999999999988653 33322 3444432 235788888888776665421 1244444
Q ss_pred eeeeecccCCCcEEeee-cccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccC----CCCceEEEEeC
Q 038487 179 SHSVDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFY----NRDCVAAVTLG 253 (472)
Q Consensus 179 SFP~~Qt~l~~g~Li~w-KgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~----~~~~~iGlIlG 253 (472)
.=|++. ++|++ .+ -.+. +..+.++.+.|++.+ ++| +.+.||..+..++-.+. +. ..+-+++|
T Consensus 64 pG~vd~---~~g~v-~~~~~~~--~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~G 130 (289)
T 2aa4_A 64 TGIIRD---GSLLA-LNPHNLG--GLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDIT-DMVFITVS 130 (289)
T ss_dssp SSEEET---TEEEC-SSGGGGG--GGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEES
T ss_pred ccceeC---CCCEE-EeCCCCC--cccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEeC
Confidence 444552 22333 23 3321 123457888888776 444 46899999988875433 33 78999999
Q ss_pred CccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCC-cceeeeeccccchHHHHHHHH
Q 038487 254 TGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPG-SMIFEKLVSGMYLGEIVRRVL 332 (472)
Q Consensus 254 TGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg-~q~~EKmiSG~YLGEivRlil 332 (472)
||..++++.+-. + +.+. --.--|||..-- -|-... -.-| ...+|...|+..|
T Consensus 131 tGiG~gii~~G~-l--~~G~------~g~aGE~Gh~~~--~~~g~~--------c~cG~~gcle~~~s~~~l-------- 183 (289)
T 2aa4_A 131 TGVGGGVVSGCK-L--LTGP------GGLAGHIGHTLA--DPHGPV--------CGCGRTGCVEAIASGRGI-------- 183 (289)
T ss_dssp SSEEEEEEETTE-E--ECCT------TSCCCCGGGSBS--CTTSCB--------CTTSCBSBHHHHHSHHHH--------
T ss_pred ccEEEEEEECCE-E--eeCC------CCCCccCCcEEE--CCCCCc--------CCCCCchhHHHHhCHHHH--------
Confidence 999999886411 0 0110 001135553310 000000 0112 2467777776433
Q ss_pred HHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHH
Q 038487 333 LRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAA 412 (472)
Q Consensus 333 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~A 412 (472)
.+...+ +.. ..+...+....++ -+ ..|..+.+++++..|
T Consensus 184 ~~~~~~-----------~~~----------------~~~~~~v~~~a~~------gd--------~~a~~i~~~~~~~L~ 222 (289)
T 2aa4_A 184 AAAAQG-----------ELA----------------GADAKTIFTRAGQ------GD--------EQAQQLIHRSARTLA 222 (289)
T ss_dssp HHTCCG-----------GGT----------------TCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHH
T ss_pred HHHHHH-----------hcc----------------CCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHH
Confidence 111110 000 0111112222111 11 345678889999999
Q ss_pred HHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHH
Q 038487 413 AGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456 (472)
Q Consensus 413 a~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l 456 (472)
.+++.++..++. + .|.+.|++. ..+.|.+.+++.+++.
T Consensus 223 ~~i~~l~~~l~p---~--~ivlgG~~~-~~~~~~~~l~~~l~~~ 260 (289)
T 2aa4_A 223 RLIADIKATTDC---Q--CVVVGGSVG-LAEGYLALVETYLAQE 260 (289)
T ss_dssp HHHHHHHHHHCC---S--EEEEEHHHH-TSTTHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCC---C--EEEEeCccc-ccHHHHHHHHHHHHHh
Confidence 999999888764 2 477889998 6788999999888775
No 21
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.57 E-value=5.1e-06 Score=82.19 Aligned_cols=264 Identities=13% Similarity=0.161 Sum_probs=149.3
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
.+|++|+|||++|++++.+.|. +..+. .++.|. .+.+++++.+.+ ++++. . -.+|+.
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~--------~--~i~gig 61 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAEN--------T--DVTGIA 61 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTC--------T--TCCEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhc--------C--CeeEEE
Confidence 5899999999999999988653 34322 344442 223555555544 44432 1 235555
Q ss_pred Eeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEE
Q 038487 178 WSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVT 251 (472)
Q Consensus 178 FSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlI 251 (472)
++.| ++. ++|+++.--.+ ++..+.++.+.|++.+ ++| +.|.||.-+..++-.+ .+.+..+.+.
T Consensus 62 i~~pG~vd~---~~g~v~~~~~l--~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 130 (297)
T 4htl_A 62 VSAPGYVNP---KTGLITMGGAI--RRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLT 130 (297)
T ss_dssp EEESSEECT---TTCEEEECTTC--GGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred EecCcceeC---CCCEEEeCCCC--CCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 5555 542 34555431211 1123467788888776 455 4799999887766543 4567889999
Q ss_pred eCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCCcceeeeeccccchHHHHHHH
Q 038487 252 LGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRV 331 (472)
Q Consensus 252 lGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRli 331 (472)
+|||.-++++..=. + +.+.. -.--|+|.. +. |.. ....++...+|...|+..|-+.++.
T Consensus 131 ~GtGiG~giv~~G~-l--~~G~~------g~aGEiGh~-----~~---~~~---~~~~~~~~~le~~~s~~~l~~~~~~- 189 (297)
T 4htl_A 131 IGTGIGGGIFSNGE-L--VRGGR------FRAGEFGYM-----FS---ERP---GAFRPGKYTLNETTTMLVLRRQYAE- 189 (297)
T ss_dssp ESSSEEEEEEETTE-E--CCCTT------SCCCCGGGS-----BS---SCC---CSSCGGGGBHHHHSSHHHHHHHHHH-
T ss_pred ECcceEEEEEECCE-E--EecCC------CCcccccce-----Ee---cCC---CCcCcccCcHHHhccHHHHHHHHHH-
Confidence 99999999987411 1 11100 001244432 11 000 0012455667888887665443322
Q ss_pred HHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHH
Q 038487 332 LLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLA 411 (472)
Q Consensus 332 l~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~ 411 (472)
.. + .+. ..++ ...+.....+ -+ ..|..+.+++++..
T Consensus 190 ---~~--~------~~~-----~~~~--------------~~~i~~~a~~------gd--------~~a~~~~~~~~~~L 225 (297)
T 4htl_A 190 ---LT--G------RPL-----EEIT--------------GEEIFANYDA------HD--------AVSERLITEFYTGI 225 (297)
T ss_dssp ---HH--C------CCG-----GGCC--------------HHHHHHHHHT------TC--------HHHHHHHHHHHHHH
T ss_pred ---Hh--c------CCc-----cCCC--------------HHHHHHHHHc------CC--------HHHHHHHHHHHHHH
Confidence 11 0 010 0011 1111111111 11 34567888999999
Q ss_pred HHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHhCCCCCCcEEEEec
Q 038487 412 AAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEMLGNELSDNVIVEPS 470 (472)
Q Consensus 412 Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~~~~~~~~i~~~~~ 470 (472)
|.+|+.++..++. + .|-+.|++.+. +.|.+.+++.+++... ..+.|+.+
T Consensus 226 a~~i~~l~~~~~p---~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~----~~~~i~~s 274 (297)
T 4htl_A 226 CTGLYNLIYLFDP---T--HIFIGGGITSR-PTFIAELKHHMESFGL----RDTIIETA 274 (297)
T ss_dssp HHHHHHHHHHHCC---S--EEEEESGGGGS-TTHHHHHHHHHTTTCC----TTCEEEEC
T ss_pred HHHHHHHHHHhCC---C--EEEEeCccccc-HHHHHHHHHHHHHhcc----CCCeEEEC
Confidence 9999999887764 2 47778998874 7888888888875432 23455544
No 22
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=98.52 E-value=2.6e-06 Score=86.97 Aligned_cols=261 Identities=13% Similarity=0.036 Sum_probs=152.0
Q ss_pred ccEEEEEeCCCeeEEEEEEe----CCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccc
Q 038487 97 GLYYGINLRATDFLILCARL----GGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEK 172 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L----~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (472)
+.+|++|+|||++|++++.+ .| .+.... . ..|. .+.+++++.|++.+.++.... ..-
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~---------~~~ 89 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASV---------MKR 89 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHH---------HTT
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhcc---------ccc
Confidence 46899999999999999998 44 233222 1 1232 245778888888777654321 012
Q ss_pred cceeEEeee--eecccCCCcEEe----eecc-cccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhc-------
Q 038487 173 KLGYTWSHS--VDQVTTLSPSAI----KWKN-FAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAG------- 238 (472)
Q Consensus 173 ~lGfTFSFP--~~Qt~l~~g~Li----~wKg-F~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla------- 238 (472)
.+|..++.| ++. |++. .|++ |.+ .+++++ .+++..+.|.||..+..++
T Consensus 90 i~gigi~~pG~vd~-----g~v~~~~~~~~~~~~l--------~~~l~~-----~~~~~pv~v~NDa~aaalge~~l~~~ 151 (373)
T 2q2r_A 90 VKAGVINVPGPVTG-----GAVGGPFNNLKGIARL--------SDYPKA-----LFPPGHSAILNDLEAGGFGVLAVSDA 151 (373)
T ss_dssp EEEEEEEESSCEET-----TTEECCCSSSBSCEEG--------GGSCTT-----TSCTTSEEEEEHHHHHHHHHHHHHHT
T ss_pred ccEEEEEeeccccC-----CEEeccCCCCCCcCCH--------HHHHHH-----hcCCCCEEEEccHhHHhccccccChh
Confidence 356666666 553 3333 3433 233 333222 1344235699999998888
Q ss_pred ---------ccc---------------CCCCceEEEEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCC
Q 038487 239 ---------GRF---------------YNRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSF 294 (472)
Q Consensus 239 ---------~~y---------------~~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l 294 (472)
..+ ...+..+.+++|||..++++..-. ...+....-.|||...-+
T Consensus 152 ~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~---------l~~G~~~~aGE~Gh~~~~-- 220 (373)
T 2q2r_A 152 HVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNP---------PMNQHIVVPLELGSQTLP-- 220 (373)
T ss_dssp TCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC------------CEEEEEECGGGSBCC--
T ss_pred hhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCc---------ccCCCcccccccceeecC--
Confidence 222 234678999999999999987411 122455667799865321
Q ss_pred CCC--ccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcCh
Q 038487 295 PVT--EFDASLDAESLNPGSMIFEKLVSGMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDH 372 (472)
Q Consensus 295 p~T--~~D~~lD~~S~nPg~q~~EKmiSG~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 372 (472)
+.. .....+-.... +.-.+|...||..|-++.+.. . .+ . ++ ..+.+.
T Consensus 221 ~~~~c~cg~~l~~~~~--~~g~lE~~~S~~~l~~~~~~~----~-~~-----~-~~------~~~~~~------------ 269 (373)
T 2q2r_A 221 MRKDIDYIQTLHAELK--LFPNYENMVSGAGLEFHYRQV----V-RG-----S-RP------PCSAGE------------ 269 (373)
T ss_dssp CSSCHHHHHHHHHHHT--SCCBHHHHSSHHHHHHHHHHH----H-TT-----S-SC------CCCHHH------------
T ss_pred CCCCcchhHHHHHHhh--ccccHhHhcCHHHHHHHHHHH----h-cC-----C-CC------CCCHHH------------
Confidence 111 11111111110 246789999998887655532 1 01 0 10 011111
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHH--HHH
Q 038487 373 ELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRN--YLH 450 (472)
Q Consensus 373 ~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~--~l~ 450 (472)
+.....+ | + ..|..+.+++++..|.+++.++..++. + .|.+.|+.+.+.+.|.+ .++
T Consensus 270 --i~~~a~~--g----D--------~~a~~~l~~~~~~L~~~i~~l~~~l~p---~--~IvlgGG~~~~~~~~~~~~~i~ 328 (373)
T 2q2r_A 270 --IAKLASE--G----D--------ANACKAMKKYHEYLMRVGSEASMALLP---L--TIVLVGDNIVNNAFFYRNPQNL 328 (373)
T ss_dssp --HHHHHHT--T----C--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---S--EEEECSHHHHHTHHHHHSHHHH
T ss_pred --HHHHHHc--C----C--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---C--EEEEeCChHhCchhhhcchhHH
Confidence 1111111 1 1 356678899999999999999998864 2 47777885555588888 888
Q ss_pred HHHHHHh
Q 038487 451 SSVWEML 457 (472)
Q Consensus 451 ~~l~~l~ 457 (472)
+.+++.+
T Consensus 329 ~~l~~~~ 335 (373)
T 2q2r_A 329 KEMHHEA 335 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 23
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.49 E-value=5.1e-06 Score=82.90 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=88.3
Q ss_pred ccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccc
Q 038487 95 EKGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKL 174 (472)
Q Consensus 95 E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (472)
+.+.++++|+|||++|++++.+.|. +..+. .++.|+. ..+++++.|.+.+.+++++.+ .-.+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~---------~~i~ 66 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFN---------ARCH 66 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHT---------EEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcC---------CCee
Confidence 3467899999999999999999763 33322 2333321 235678888888888776532 1246
Q ss_pred eeEEeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccc---cCCCCceEE
Q 038487 175 GYTWSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGR---FYNRDCVAA 249 (472)
Q Consensus 175 GfTFSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~---y~~~~~~iG 249 (472)
|+.++.| ++. ++|+++..-.+...+.-+.++.+.|++.+ ++| +.+-||.-+..++.. ....+..+.
T Consensus 67 gigi~~pG~vd~---~~g~v~~~~~l~~~~~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~~~ 137 (310)
T 3htv_A 67 GLVMGFPALVSK---DKRTIISTPNLPLTAADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLVLA 137 (310)
T ss_dssp EEEEEESSCBCT---TSSCBCSCCSSSCCHHHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCEEE
T ss_pred EEEEeccccEeC---CCCEEEeCCCCCCccccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceEEE
Confidence 7777776 432 23443321211111101236777777766 454 468999988664321 123467788
Q ss_pred EEeCCccceeeecc
Q 038487 250 VTLGTGTNAAYVES 263 (472)
Q Consensus 250 lIlGTGtNacY~e~ 263 (472)
+.+|||.-++.+..
T Consensus 138 v~~GtGiG~gii~~ 151 (310)
T 3htv_A 138 AYLGTGMGFAVWMN 151 (310)
T ss_dssp EEESSSEEEEEEET
T ss_pred EEeceeEEEEEEEC
Confidence 99999999999874
No 24
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=98.44 E-value=1.8e-05 Score=77.63 Aligned_cols=246 Identities=16% Similarity=0.184 Sum_probs=137.9
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
.+|++|+|||++|++++.+.|. +..+. .++.| .+.+++.+.|.+. +++ . -..|..
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~----i~~-~----------~i~gig 59 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQR----LSE-Q----------DYSGIA 59 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHH----HTT-S----------CCSEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHH----HHh-C----------CCcEEE
Confidence 3899999999999999988653 33322 34444 2345666555554 433 1 124555
Q ss_pred Eeee--eecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc--CCCCceEEEEeC
Q 038487 178 WSHS--VDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF--YNRDCVAAVTLG 253 (472)
Q Consensus 178 FSFP--~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y--~~~~~~iGlIlG 253 (472)
++.| ++. ++|++..--.+. ...+.++.+.| +.+ ++| +.|.||..+..++-.+ .+.+..+-+.+|
T Consensus 60 i~~pG~vd~---~~g~v~~~~~~~--~~~~~~l~~~l-~~~---~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~G 127 (292)
T 2gup_A 60 MSVPGAVNQ---ETGVIDGFSAVP--YIHGFSWYEAL-SSY---QLP---VHLENDANCVGLSELLAHPELENAACVVIG 127 (292)
T ss_dssp EEESSEECT---TTCBEESCCSSG--GGSSSBHHHHT-GGG---CCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEES
T ss_pred EEecCcccC---CCCEEEecCCCC--cccCCCHHHHH-HHc---CCC---EEEechHHHHHHHHHHhcCCCCeEEEEEEC
Confidence 5555 542 235544212211 01134555555 433 454 4689999998877533 355788999999
Q ss_pred CccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCC-CcceeeeeccccchHHHHHHHH
Q 038487 254 TGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNP-GSMIFEKLVSGMYLGEIVRRVL 332 (472)
Q Consensus 254 TGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nP-g~q~~EKmiSG~YLGEivRlil 332 (472)
||..++++..=. + +.+... .--|||. ++..+ .+ +.-.+|...|+..|-+.++.
T Consensus 128 tGiG~giv~~G~-l--~~G~~g------~aGEiGh-----~~~~~----------~~~~~gcle~~~s~~~l~~~~~~-- 181 (292)
T 2gup_A 128 TGIGGAMIINGR-L--HRGRHG------LGGEFGY-----MTTLA----------PAEKLNNWSQLASTGNMVRYVIE-- 181 (292)
T ss_dssp SSEEEEEEETTE-E--ECCTTS------CTTCGGG-----CBSSC----------CSSSCCBHHHHHSHHHHHHHHHH--
T ss_pred CceEEEEEECCE-E--EecCCC------CCcccee-----EEecc----------CCCCCCcHHHhcCHHHHHHHHHH--
Confidence 999999886311 0 011000 0013332 22111 11 23567877776554332221
Q ss_pred HHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHHHH
Q 038487 333 LRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARLAA 412 (472)
Q Consensus 333 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L~A 412 (472)
.. + . + .++ ...+.....+ -+ ..|..+.+++++..|
T Consensus 182 -~~---~-----~-~-------~~~--------------~~~v~~~a~~------gd--------~~a~~i~~~~~~~L~ 216 (292)
T 2gup_A 182 -KS---G-----H-T-------DWD--------------GRKIYQEAAA------GN--------ILCQEAIERMNRNLA 216 (292)
T ss_dssp -HH---S-----S-C-------CCC--------------HHHHHHHHHT------TC--------HHHHHHHHHHHHHHH
T ss_pred -hh---C-----C-C-------CCC--------------HHHHHHHHHc------CC--------HHHHHHHHHHHHHHH
Confidence 00 0 0 0 011 1111111111 11 345678889999999
Q ss_pred HHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHh
Q 038487 413 AGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457 (472)
Q Consensus 413 a~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~ 457 (472)
.+++.++..++. + .|.+.|++.. .+.|.+.+++.+++..
T Consensus 217 ~~i~~l~~~l~p---~--~IvlgG~i~~-~~~~~~~l~~~l~~~~ 255 (292)
T 2gup_A 217 QGLLNIQYLIDP---G--VISLGGSISQ-NPDFIQGVKKAVEDFV 255 (292)
T ss_dssp HHHHHHHHHHCC---S--EEEEESGGGG-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC---C--EEEEeCcccc-chHHHHHHHHHHHHhh
Confidence 999999987764 2 4778899864 6889999999998765
No 25
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.22 E-value=0.0001 Score=72.34 Aligned_cols=255 Identities=12% Similarity=0.059 Sum_probs=137.9
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEE
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTW 178 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTF 178 (472)
+|++|+|||+.|++++.+.|. +..+. .++.|. ....+.+++++.|.+.+.+++++. ..|..+
T Consensus 4 ~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~------------~~~igi 65 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE------------ADVVGM 65 (299)
T ss_dssp EEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC------------CSEEEE
T ss_pred EEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC------------CCEEEE
Confidence 799999999999999988653 33322 333332 112346889999999998886531 235555
Q ss_pred eeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEeCCccce
Q 038487 179 SHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTNA 258 (472)
Q Consensus 179 SFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtNa 258 (472)
+.|=. .. +++ + .-|.+.|++ +++ .+.+.||..+..++... .+..+-+++|||..
T Consensus 66 ~~~G~-~~-~~~-----------------~-~~l~~~l~~--~~~-pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~i- 119 (299)
T 2e2o_A 66 GVAGL-DS-KFD-----------------W-ENFTPLASL--IAP-KVIIQHDGVIALFAETL--GEPGVVVIAGTGSV- 119 (299)
T ss_dssp EETTC-CS-HHH-----------------H-HHHHHHHTT--SSS-EEEEEEHHHHHHHHHHT--TSCEEEEEESSSEE-
T ss_pred EcCCC-Cc-hhH-----------------H-HHHHHHHHh--CCC-CEEEeCcHHHHHhhccC--CCCeEEEEecCCEE-
Confidence 55522 10 001 0 234555554 554 45699999999887644 46678899999951
Q ss_pred eeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhccCCCCC----cceeeeeccccchHHHHHHHHHH
Q 038487 259 AYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDAESLNPG----SMIFEKLVSGMYLGEIVRRVLLR 334 (472)
Q Consensus 259 cY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPg----~q~~EKmiSG~YLGEivRlil~~ 334 (472)
..- ++ .+..-.--|||..--+ +-..+..- +.| .+.+|-..|+..|-+.++..
T Consensus 120 --~~g-----~~------~G~~~~aGE~Gh~~~~--~g~~c~cG------~~gl~~~~~~le~~~s~~~l~~~~~~~--- 175 (299)
T 2e2o_A 120 --VEG-----YN------GKEFLRVGGRGWLLSD--DGSAYWVG------RKALRKVLKMMDGLENKTILYNKVLKT--- 175 (299)
T ss_dssp --EEE-----EC------SSCEEEEECSCTTTCC--TTSHHHHH------HHHHHHHHHHHTTSSCCCHHHHHHHHH---
T ss_pred --EEE-----Ec------CCeEEecCCcCCCcCC--CccHHHHH------HHHHHHHHHHHhCCCCCCHHHHHHHHH---
Confidence 111 11 1345556788854110 10000000 000 01345555655544333210
Q ss_pred HHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChH----HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHH
Q 038487 335 MAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHE----LVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARL 410 (472)
Q Consensus 335 ~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~----~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L 410 (472)
++...+ ...+..+.... .+.. ....+++. .. .- -..|..+.+++++.
T Consensus 176 -------~~~~~~----------~~l~~~~~~~~-~~~~~~~~~~~~v~~~-a~--~g--------d~~a~~il~~~~~~ 226 (299)
T 2e2o_A 176 -------INVKDL----------DELVMWSYTSS-CQIDLVASIAKAVDEA-AN--EG--------DTVAMDILKQGAEL 226 (299)
T ss_dssp -------TTCCSH----------HHHHHHHHHHT-TCHHHHHTTHHHHHHH-HH--TT--------CHHHHHHHHHHHHH
T ss_pred -------hCCCCH----------HHHHHHHHcCC-CCHHHHHHHHHHHHHH-Hh--cC--------CHHHHHHHHHHHHH
Confidence 000000 00000000000 0000 00111110 00 00 14567889999999
Q ss_pred HHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHH
Q 038487 411 AAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456 (472)
Q Consensus 411 ~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l 456 (472)
.|.+++.++..++. -.|.+.|++... +.|.+.+++.+++.
T Consensus 227 La~~i~~l~~~l~p-----~~IvlgGgv~~~-~~~~~~l~~~~~~~ 266 (299)
T 2e2o_A 227 LASQAVYLARKIGT-----NKVYLKGGMFRS-NIYHKFFTLYLEKE 266 (299)
T ss_dssp HHHHHHHHHHHHTC-----SEEEEESGGGGS-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCC-----CEEEEECCccCc-HHHHHHHHHHCCCC
Confidence 99999999998853 257888999988 88999998888763
No 26
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.99 E-value=5.1e-05 Score=74.67 Aligned_cols=124 Identities=14% Similarity=0.041 Sum_probs=74.0
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEE
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTW 178 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTF 178 (472)
||+||+|||+.|++++. .|. +..+. ..+ |......+.+++++.|.+.+.+.+.... . -..|+.+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~-------~--~i~~igi 65 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF--QTS-GINPFQQDRNEIDTALRSEVLPAIGQKA-------S--SIRAVYF 65 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE--EEE-CCCTTTSCHHHHHHHHTTTTHHHHTTST-------T--TCCEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHHhCCCc-------c--cccEEEE
Confidence 78999999999999998 652 33222 111 2111122457788888887776542110 1 1235555
Q ss_pred eeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCc-eEEEEEecchhhhhccccCCCCceEEEEeCCccc
Q 038487 179 SHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNM-RVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTN 257 (472)
Q Consensus 179 SFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v-~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtN 257 (472)
+.|=- . . + .|.++.+.|++.+ +. ..+.|.||..+..++.. ..+..+.+|+|||.+
T Consensus 66 g~pG~--------~--~------~-~~~~l~~~l~~~~-----~~~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 66 YGAGC--------T--P------A-KAPMLNEALDSML-----PHCDRIEVAGDMLGAARALC--GDSEGIACILGTGSN 121 (291)
T ss_dssp EETTC--------C--T------T-THHHHHHHHHHHS-----TTCSEEEEECHHHHHHHHHT--TTSCEEEEEESSSEE
T ss_pred ECCCC--------C--h------H-HHHHHHHHHHHhc-----CCCCcEEEeCcHHHHHHhhc--CCCCcEEEEecCChh
Confidence 55511 0 1 0 1224444444432 33 35689999999888753 446779999999999
Q ss_pred eeeec
Q 038487 258 AAYVE 262 (472)
Q Consensus 258 acY~e 262 (472)
++.+.
T Consensus 122 g~~i~ 126 (291)
T 1zbs_A 122 SCLFD 126 (291)
T ss_dssp EEEEC
T ss_pred eEEEC
Confidence 76654
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.98 E-value=0.00018 Score=69.71 Aligned_cols=147 Identities=15% Similarity=0.154 Sum_probs=92.4
Q ss_pred cccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Q 038487 94 EEKGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKK 173 (472)
Q Consensus 94 ~E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~ 173 (472)
.+...++++|+|||++|++++.+.++ .+.. ....++.|.. .+.+++++.|.+.+.+++++.... ....-
T Consensus 9 ~~~~~~lgidiggt~i~~~l~dl~~g--~i~~-~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~ 77 (267)
T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIVDLKKG--KLLG-ERFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGSP 77 (267)
T ss_dssp --CCCEEEEEECSSEEEEEEEETTTT--EEEE-EEEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTCC
T ss_pred CCCCEEEEEEECCCEEEEEEEECCCC--eEEE-EEEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccce
Confidence 34456899999999999999999632 2331 1123444421 245889999999999998653210 11122
Q ss_pred ceeEEeeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCC-ceE
Q 038487 174 LGYTWSHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRD-CVA 248 (472)
Q Consensus 174 lGfTFSFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~-~~i 248 (472)
+|+...=|++ +|+++.--.+. ++..+.++.+.|++.+ ++| +.+.||.-+..++-.+ .+.+ ..+
T Consensus 78 igi~~pG~v~-----~g~v~~~~~l~-~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~~~~ 145 (267)
T 1woq_A 78 VGVTFPGIIQ-----HGVVHSAANVD-KSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKGTVL 145 (267)
T ss_dssp EEEEESSCEE-----TTEECCCTTSC-GGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCSEEE
T ss_pred EEEEccceEc-----CCEEEeCCCCC-CCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCCcEE
Confidence 4444444464 46654213221 0112568888888877 444 4689999998887543 2333 567
Q ss_pred EEEeCCccceeeecc
Q 038487 249 AVTLGTGTNAAYVES 263 (472)
Q Consensus 249 GlIlGTGtNacY~e~ 263 (472)
.+.+|||.-++.+.+
T Consensus 146 ~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 146 VITLGTGIGSAFIFD 160 (267)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECcceEEEEEEC
Confidence 899999999999864
No 28
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=97.89 E-value=1.3e-05 Score=78.99 Aligned_cols=136 Identities=12% Similarity=0.053 Sum_probs=70.1
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCC-cccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPS-DVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
||+||+|||+.|++++. .|. +..+. ..|. .....+.+++++.|.+.+.+.+... -..|+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~~----~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-----------~i~~ig 62 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKRL----GTKGINPFFQSEEEIQQKLTASLLPQLPEG-----------KFNAVY 62 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEEE----EECCCCTTTSCSTTTTTTTTC------------------------CE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEEE----ECCCCCcccCCHHHHHHHHHHHHHHhcCcc-----------cccEEE
Confidence 68999999999999998 552 33222 1221 1111123455555655554443110 123455
Q ss_pred EeeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEeCCccc
Q 038487 178 WSHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTLGTGTN 257 (472)
Q Consensus 178 FSFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIlGTGtN 257 (472)
++.|=-- - + .+.++.+.|++.+ +.. ..+.|.||..+..++.. ..+..+.+|+|||.+
T Consensus 63 ig~pG~~----------~------~-~~~~l~~~l~~~~---~~~-~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi~ 119 (291)
T 1zxo_A 63 FYGAGCT----------P------E-KAPVLRRAIADSL---PVI-GNIKANSDMLAAAHGLC--GQKAGIACILGTGSN 119 (291)
T ss_dssp EECTTCC----------T------T-TTHHHHHHHHHHS---CCC-SCCEEECSHHHHHHHTT--TTSCBEEEEESSSEE
T ss_pred EEcCCCC----------H------H-HHHHHHHHHHHhc---CCC-ceEEEECcHHHHHHhhc--CCCCcEEEEeCCChh
Confidence 5555210 0 0 1234444444432 210 23578999999988763 446678999999998
Q ss_pred eeeecccCCCCCCCCCCCCCCcEEEeeccCCC
Q 038487 258 AAYVESSQAVPKWQGPSPKSGEIVISTEWGNF 289 (472)
Q Consensus 258 acY~e~~~~i~k~~~~~~~~~~miINtEwG~f 289 (472)
++.+.. +++..---|||..
T Consensus 120 g~gi~~-------------~G~~~~aGe~Gh~ 138 (291)
T 1zxo_A 120 SCFYNG-------------KEIVSNISPLGFI 138 (291)
T ss_dssp EEEECS-------------SSEEEECCCCCTT
T ss_pred eEEECC-------------CCcEEEeCCCccc
Confidence 555532 2345545588865
No 29
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.86 E-value=0.00061 Score=68.14 Aligned_cols=264 Identities=13% Similarity=0.121 Sum_probs=141.7
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccce
Q 038487 96 KGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLG 175 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lG 175 (472)
.+.+|++|+||||+|++++.+.++ .+... ..+ |.. +.+.+ .+.|.+++++.. . -..|
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g--~i~~~--~~~--~~~----~~~~~----~~~i~~~~~~~~-------~--~i~g 69 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASG--EISQA--KTY--SGL----DYPSL----EAVIRVYLEEHK-------V--EVKD 69 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTC--CEEEE--EEE--EGG----GCSCH----HHHHHHHHHHSC-------C--CCCE
T ss_pred CCEEEEEEechhheEEEEEECCCC--cEEEE--EEe--cCC----CcCCH----HHHHHHHHHhcC-------C--CccE
Confidence 356899999999999999998322 23321 122 221 11223 344455555432 1 2456
Q ss_pred eEEeeeeecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccC-------------
Q 038487 176 YTWSHSVDQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFY------------- 242 (472)
Q Consensus 176 fTFSFP~~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~------------- 242 (472)
..++.|=-- +.+++ ..-++... .+ .+.|++.+ +++ .+.|.||.-+..++-.+.
T Consensus 70 igi~~pG~v---d~~~~-~~~nl~w~----~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g~~ 135 (332)
T 1sz2_A 70 GCIAIACPI---TGDWV-AMTNHTWA----FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGAEP 135 (332)
T ss_dssp EEEEESSCC---CSSEE-CCSSSCCC----EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSCCC
T ss_pred EEEEEeCce---eCCEE-eeeCCCCc----CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCCCC
Confidence 777776321 23443 11222211 23 35666555 444 246999999988876542
Q ss_pred -CCCceEEEEeCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccchhhhc-cCCCCCcceeeeecc
Q 038487 243 -NRDCVAAVTLGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDASLDA-ESLNPGSMIFEKLVS 320 (472)
Q Consensus 243 -~~~~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~-~S~nPg~q~~EKmiS 320 (472)
+.+..+.+.+|||.-++++.+-. .+.--.-.|+|... ..|....+..+-. -..+-|.-.+|.+.|
T Consensus 136 ~~~~~~~~v~~GTGiG~giv~~g~-----------~G~~g~agE~GH~~--v~~~~~~~~~l~~~~c~~~g~gclE~~~S 202 (332)
T 1sz2_A 136 VEGKPIAVYGAGTGLGVAHLVHVD-----------KRWVSLPGEGGHVD--FAPNSEEEAIILEILRAEIGHVSAERVLS 202 (332)
T ss_dssp CTTCCEEEEEESSSEEEEEEEEET-----------TEEEEEECCGGGSB--CCCCSHHHHHHHHHHHHHSSSCBGGGTSS
T ss_pred CCCCcEEEEEcCccceEEEEecCC-----------CCeeeCCCCccccC--cCCCChHHHHHHHHHHhccCCcchhhhcc
Confidence 34667899999999999987521 23344556777541 1122221111100 000123457899999
Q ss_pred ccchHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 038487 321 GMYLGEIVRRVLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVC 400 (472)
Q Consensus 321 G~YLGEivRlil~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~ 400 (472)
|.-|-..+|..... .+ ..+ ...+ ...+.....+ | .+ ..|
T Consensus 203 ~~~l~~~~~~~~~~---~~-----~~~------~~~~--------------~~~i~~~a~~--G---~D--------~~A 241 (332)
T 1sz2_A 203 GPGLVNLYRAIVKA---DN-----RLP------ENLK--------------PKDITERALA--D---SC--------TDC 241 (332)
T ss_dssp HHHHHHHHHHHHHH---TT-----CCC------CCCC--------------HHHHHHHHHH--T---CC--------HHH
T ss_pred HHHHHHHHHHHhhc---cC-----CCc------cCCC--------------HHHHHHHHHc--C---CC--------HHH
Confidence 98887666542211 00 000 0111 1111111111 0 01 346
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeec-HhHH-HHHHHHHH
Q 038487 401 DIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHY-RIFR-NYLHSSVW 454 (472)
Q Consensus 401 ~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~-p~y~-~~l~~~l~ 454 (472)
..+.+++++..|.+++.++..++. ..-|-+-|++.... +.|. +.+++.++
T Consensus 242 ~~~~~~~~~~Lg~~i~~l~~~l~P----~~gvvigGGi~~~~~~~l~~~~~~~~~~ 293 (332)
T 1sz2_A 242 RRALSLFCVIMGRFGGNLALNLGT----FGGVFIAGGIVPRFLEFFKASGFRAAFE 293 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC----TTEEEEECSSSGGGHHHHHHSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC----CeEEEEEChhhhhHHHHhccHHHHHHHH
Confidence 678899999999999999998864 22367788887653 3332 23555544
No 30
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.80 E-value=0.00086 Score=68.74 Aligned_cols=55 Identities=16% Similarity=0.076 Sum_probs=42.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHH
Q 038487 399 VCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEM 456 (472)
Q Consensus 399 I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l 456 (472)
.|..+.+++++..|.+|+.++..++.+ +-.|.+.|++.+..+.+.+.+++.+..+
T Consensus 269 ~a~~~l~~~~~~la~~i~~l~~~l~~~---p~~IvlgGgi~~~~~~l~~~i~~~l~~~ 323 (381)
T 1saz_A 269 WAKRVYRAMAYQIAKWIGKMAAVLKGE---VDFIVLTGGLAHEKEFLVPWITKRVSFI 323 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC---CSEEEEEEGGGGCTTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEeCcCccChHHHHHHHHHHHHhh
Confidence 456778889999999999998887221 2258888999988777999999888765
No 31
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.65 E-value=0.00051 Score=68.17 Aligned_cols=242 Identities=17% Similarity=0.186 Sum_probs=138.1
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccceeE
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYT 177 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (472)
-|+++|+|||++|++++.+.|. +..+. .++.| +.+++++.|++ ++++. +..-+|+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~t~------~~~~~l~~i~~----~~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI--EFPTX------MPDETIEXVIQ----YFSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECC------CHHHHHHHHHH----HHTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE--EecCC------ChHHHHHHHHH----HhccC---------CceEEEEE
Confidence 4799999999999999988653 33322 33333 24555555554 44321 12334444
Q ss_pred Eeeeeeccc--CCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhcccc----CCCCceEEEE
Q 038487 178 WSHSVDQVT--TLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF----YNRDCVAAVT 251 (472)
Q Consensus 178 FSFP~~Qt~--l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y----~~~~~~iGlI 251 (472)
..=|++... ...|++..... .+..+.++.+.|++.+ ++| +.+.||.-+..++-.+ .+.+..+.+.
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~---~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l~ 130 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPX---AGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYIT 130 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSS---TTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEE
T ss_pred eceeeccccccccccEEecCCC---CCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEE
Confidence 444566432 12255543321 1234578888888877 454 4689999888766543 3567889999
Q ss_pred eCCccceeeecccCCCCCCCCCCCCCCcEEEeeccCCCCCCCCCCCccch-hhhccCCCCCcceeeeeccccchHHHHHH
Q 038487 252 LGTGTNAAYVESSQAVPKWQGPSPKSGEIVISTEWGNFSSSSFPVTEFDA-SLDAESLNPGSMIFEKLVSGMYLGEIVRR 330 (472)
Q Consensus 252 lGTGtNacY~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~-~lD~~S~nPg~q~~EKmiSG~YLGEivRl 330 (472)
+|||.-++++.. .++ +.+ .. ..|+|.. +...-+. ........ |.-.+|.+.||..|-+.
T Consensus 131 ~GtGiG~gii~~-G~l--~~G------~~--agEiGh~-----~v~~~~~~~~~~~C~~-~~gclE~~~S~~al~~~--- 190 (302)
T 3epq_A 131 IGTGIGAGAIVE-GRL--LQG------LS--HPEMGHI-----YIRRHPDDVYQGXCPY-HGDCFEGLASGPAIEAR--- 190 (302)
T ss_dssp ESSSEEEEEEET-TEE--CCS------SS--CCCGGGC-----CCCCCTTCCCCCSBTT-TBSSHHHHHSHHHHHHH---
T ss_pred ECCceEEEEEEC-CEE--ccc------CC--CCccceE-----EEecCCCCCcCcccCC-CCcchhhhCCHHHHHHH---
Confidence 999999999874 111 111 11 2355533 1111000 00000000 11467888887665321
Q ss_pred HHHHHHhccCCCCCCCCCCcCCCCcCCchhhhhhccCCCcChHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhHH
Q 038487 331 VLLRMAKEADLFGDTVPPKLMMPYLLRPPDMATMHQDTSEDHELVREKLEEVFGITDSTPKAREAVVEVCDIVTERAARL 410 (472)
Q Consensus 331 il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~I~~~V~~RaA~L 410 (472)
.+. .. ..+ . . +..+.+++++.
T Consensus 191 -----~~~-------~~-----------~~~---~----------------------~-----------~~~~~~~~~~~ 211 (302)
T 3epq_A 191 -----WGX-------KA-----------ADL---S----------------------D-----------IAQVWELEGYY 211 (302)
T ss_dssp -----HSS-------CG-----------GGG---T----------------------T-----------CHHHHHHHHHH
T ss_pred -----hhc-------cc-----------ccc---c----------------------c-----------hHHHHHHHHHH
Confidence 110 00 000 0 0 01245677889
Q ss_pred HHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHHHHh
Q 038487 411 AAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVWEML 457 (472)
Q Consensus 411 ~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~~l~ 457 (472)
.|.+|+.++.-++. + .|-+.|++.+. +.|.+.+++.+++.+
T Consensus 212 La~~i~nl~~~ldP---e--~IviGGgi~~~-~~l~~~i~~~l~~~~ 252 (302)
T 3epq_A 212 IAQALAQYILILAP---X--XIILGGGVMQQ-XQVFSYIYQYVPKIM 252 (302)
T ss_dssp HHHHHHHHHHHTCC---S--CEEEESSGGGC-THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCc---h--hhhcCchhhhh-HHHHHHHHHHHHHHH
Confidence 99999999988764 2 46677888765 558889999988876
No 32
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.62 E-value=0.00079 Score=66.41 Aligned_cols=124 Identities=14% Similarity=0.047 Sum_probs=77.4
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccc-ccee
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEK-KLGY 176 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l-~lGf 176 (472)
.+|++|+|||+.|++++.+.|. +.... ..+ |... ..+.+++++.+++.|.+++++.+.. ...+ +.|.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~-----~~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLP-----AAPASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCC-----CCCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCC-----hhhhccceE
Confidence 4799999999999999998653 33222 111 1111 1346889999999999999875421 1223 3566
Q ss_pred EEeeee--ecccCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCC-ceEEEEEecchhhhhccccCCCCceEEEEeC
Q 038487 177 TWSHSV--DQVTTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLN-MRVYALVDDTIGSLAGGRFYNRDCVAAVTLG 253 (472)
Q Consensus 177 TFSFP~--~Qt~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~-v~v~aivNDTVaTlla~~y~~~~~~iGlIlG 253 (472)
.++.|= +... |+ .|+. + ++ -..+.|.||..+..++. +.. +..+.+++|
T Consensus 80 gig~pG~v~~~~--------~~--------------~l~~----~-~~~~~pv~v~NDa~aaa~ge-~~~-~~~v~v~~G 130 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG--------------EFES----Q-APGFARLSLATDGYTTLLGA-HGG-QPGIIVALG 130 (305)
T ss_dssp EEEESCCCTTSH--------HH--------------HHHH----T-CCCCSEEEEECHHHHHHHHH-TTT-SSEEEEEES
T ss_pred EEEecCCCchHH--------HH--------------HHHH----h-CCCCceEEEECCHHHHHHhh-cCC-CCeEEEEec
Confidence 666663 2111 21 0222 2 32 12457999999987775 333 566789999
Q ss_pred Cccceeeec
Q 038487 254 TGTNAAYVE 262 (472)
Q Consensus 254 TGtNacY~e 262 (472)
||+.++.+.
T Consensus 131 TGigg~~i~ 139 (305)
T 1zc6_A 131 TGSIGEALY 139 (305)
T ss_dssp SSEEEEEEC
T ss_pred CCeEEEEEe
Confidence 999655443
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.68 E-value=0.0058 Score=58.31 Aligned_cols=122 Identities=14% Similarity=0.097 Sum_probs=69.0
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCCCCCCCCccccccce
Q 038487 96 KGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLG 175 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lG 175 (472)
.+.+|++|+|||++|+ +...+. +. ...+.|. ..+.+++.+.|++ ++++. -..|
T Consensus 5 ~~~~lgiDIGGT~i~~--~d~~g~---~~----~~~~t~~---~~~~~~~~~~i~~----~i~~~-----------~i~g 57 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVKI--GLSTDG---EE----RKVESGK---TMTGPEMVAAVTA----MAKDM-----------TYDV 57 (226)
T ss_dssp GCCEEEEEECSSEEEE--EETTTC---CE----EEEECCT---TCCHHHHHHHHHH----HTTTC-----------CCSE
T ss_pred CCEEEEEEECCCEEEE--EECCCC---EE----EEEECCC---CCCHHHHHHHHHH----HHHhC-----------CCCE
Confidence 4578999999999994 444332 21 1233332 2234555555554 44332 1245
Q ss_pred eEEeee--eecccCCCcEEeee-cccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCCCCceEEEEe
Q 038487 176 YTWSHS--VDQVTTLSPSAIKW-KNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYNRDCVAAVTL 252 (472)
Q Consensus 176 fTFSFP--~~Qt~l~~g~Li~w-KgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~~~~~iGlIl 252 (472)
..++.| ++. ++ .+.+ -++. ++-.+.++. +.+ ++| +.+.||.-+.-++-.+. ...+.+.+
T Consensus 58 igi~~pG~Vd~----~~-~~~~~~nl~-~~w~~~~l~----~~~---~~p---v~v~NDanaaalge~~~--~~~~~l~~ 119 (226)
T 3lm2_A 58 IAMGYPGPVVH----NK-PLREPVNLG-EGWVGYDYE----GAF---GRP---VRIVNDALMQAIGSYNG--GRMLFLGL 119 (226)
T ss_dssp EEEEESSCEET----TE-ECSCCTTSC-SCCTTCCHH----HHH---TSC---EEEEEHHHHHHHHHCCS--SEEEEEEE
T ss_pred EEEEEEeEEEC----Ce-EEEECCcCC-ccccCCchH----Hhc---CCe---EEEEEHHHHHHHHHhhc--CcEEEEEe
Confidence 555655 653 22 2222 2220 011233442 222 454 46899998887765444 57889999
Q ss_pred CCccceeeec
Q 038487 253 GTGTNAAYVE 262 (472)
Q Consensus 253 GTGtNacY~e 262 (472)
|||.-++.+.
T Consensus 120 GtGiG~gii~ 129 (226)
T 3lm2_A 120 GTGLGAAMIV 129 (226)
T ss_dssp SSSEEEEEEE
T ss_pred CCceEEEEEE
Confidence 9999999886
No 34
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.28 E-value=0.091 Score=55.63 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=45.1
Q ss_pred ccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 95 EKGLYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 95 E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
|+..||+||+|+|+.|++++...|+ ++......++ .| +.....+.+++++.+.+++.+.+++.+
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 3456899999999999999987553 3433333332 12 222345678999999999999998754
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.85 E-value=0.1 Score=55.27 Aligned_cols=62 Identities=11% Similarity=0.198 Sum_probs=43.5
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc--C-CcccccChhHHHHHHHHHHHHHHhcC
Q 038487 96 KGLYYGINLRATDFLILCARLGGKNEPISDLHREEISI--P-SDVMCCTSQELFDYIAGEFAKFVNAH 160 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (472)
..-+|+||+|+|+.|++++...| .++......++. | +.....+.+++++.+.+++.+.+++.
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~ 70 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPD---TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTA 70 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTT---EEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCcceEEEEECCCC---CEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhc
Confidence 34689999999999999999654 334333333322 2 22334567999999999999998764
No 36
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=93.46 E-value=0.19 Score=53.31 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=43.9
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
.||+||+|+|+.|++++...|+ ++......++ .| +.....+.+++++-+.++|.+.+++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999987553 3433333332 22 223345679999999999999988754
No 37
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=93.42 E-value=0.24 Score=52.35 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=43.7
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
.+|+||+|+|+.|++++...|+ ++......++ .| +.....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999997653 3333333332 22 223345679999999999999987643
No 38
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.40 E-value=0.24 Score=52.08 Aligned_cols=61 Identities=10% Similarity=0.121 Sum_probs=42.8
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cCC-cccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IPS-DVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
.||+||+|||+.|++++...|+ ++......++ .|+ .....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAG 66 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999999999987543 3433322332 121 22344678999999999999988754
No 39
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=93.14 E-value=0.26 Score=51.96 Aligned_cols=61 Identities=15% Similarity=0.249 Sum_probs=43.7
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
.+|+||+|+|+.|++++...|+ ++......++ .| +.....+.+++++-+.++|.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999988553 3333333332 12 223345678999999999999988754
No 40
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=93.09 E-value=0.17 Score=53.57 Aligned_cols=57 Identities=7% Similarity=0.020 Sum_probs=41.4
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFV 157 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl 157 (472)
.+|+||+|+|+.|++++...|+ ++......++ .| +.....+.+++++.+.+++.+.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 5899999999999999987653 3433333332 12 23345578999999999999998
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=93.06 E-value=0.23 Score=52.06 Aligned_cols=59 Identities=14% Similarity=0.253 Sum_probs=41.3
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcC
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAH 160 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (472)
||+||+|||+.|++++...|+ ++......++ .| +.....+.+++++.+.++|.+.+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~ 63 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH 63 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC
Confidence 799999999999999986542 3433322332 12 22234567899999999999988764
No 42
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=92.71 E-value=0.24 Score=52.24 Aligned_cols=61 Identities=10% Similarity=0.084 Sum_probs=42.7
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc--CC-cccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISI--PS-DVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
.+|+||+|+|+.|++++...|. ++......++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGN 66 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999999987553 34333323321 21 12234678999999999999988753
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=92.52 E-value=0.17 Score=54.14 Aligned_cols=61 Identities=16% Similarity=0.310 Sum_probs=43.7
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc--C-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISI--P-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
-+|+||+|+|+.|++++...|+ ++...+..+++ | +.....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999997553 34333333321 2 233456789999999999999988643
No 44
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=92.51 E-value=0.24 Score=52.35 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=43.3
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc--C-CcccccChhHHHHHHHHHHHHHHhcC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISI--P-SDVMCCTSQELFDYIAGEFAKFVNAH 160 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (472)
.||+||+|+|+.|++++...|+ ++......++. | +.....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999987543 44333333331 2 22334568999999999999998764
No 45
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.29 E-value=0.2 Score=53.08 Aligned_cols=65 Identities=11% Similarity=0.144 Sum_probs=44.8
Q ss_pred cccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cC-CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 94 EEKGLYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IP-SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 94 ~E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
+|+--||+||+|.|+.|++++...|+ ++...+..|+ .| +.....+.+++++-+.++|.+.+++.+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~ 68 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 68 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 35556789999999999999876543 3433333333 12 223445788999999999999988754
No 46
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=92.26 E-value=0.24 Score=52.04 Aligned_cols=60 Identities=10% Similarity=0.128 Sum_probs=42.2
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec--cCC-cccccChhHHHHHHHHHHHHHHhcC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS--IPS-DVMCCTSQELFDYIAGEFAKFVNAH 160 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (472)
.||+||+|||+.|++++...|. ++......++ .|+ .....+.+++++.+.++|.+.+++.
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~ 66 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSA 66 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhc
Confidence 4899999999999999986542 4433333332 121 2233467899999999999998764
No 47
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=92.09 E-value=0.31 Score=51.28 Aligned_cols=59 Identities=5% Similarity=-0.055 Sum_probs=41.8
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc--CC-cccccChhHHHHHHHHHHHHHHhc
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISI--PS-DVMCCTSQELFDYIAGEFAKFVNA 159 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~ 159 (472)
.||+||+|||+.|++++...|+ ++......++. |+ .....+.+++++.+.++|.+.+++
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~ 66 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKV 66 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999987653 34333333321 21 122346789999999999998876
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=91.50 E-value=0.35 Score=51.87 Aligned_cols=61 Identities=8% Similarity=0.101 Sum_probs=43.2
Q ss_pred cEEEEEeCCCeeEEEEEEe-CCCCccceeeeeeeec-------cC-------CcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARL-GGKNEPISDLHREEIS-------IP-------SDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L-~g~~~~~~~~~~~~~~-------Ip-------~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
-||+||+|+|+.|++++.. .|+ ++......|+ .| +.....+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998 553 4443333333 12 233445678999999999999998754
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=87.75 E-value=1.6 Score=45.59 Aligned_cols=76 Identities=18% Similarity=0.110 Sum_probs=46.7
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeec------cCC-cccccChhHHHHHHHHHHHHHHhcCCCCCCCCccc
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEIS------IPS-DVMCCTSQELFDYIAGEFAKFVNAHPDNGNDTSAK 170 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~------Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~ 170 (472)
.||+||+|+|+.|++++...|... ......+. .|. .....+.+++++-+.+++.+..... .+
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~---~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~--------~~ 73 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECR---SLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAG--------IA 73 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGT---EEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTT--------CC
T ss_pred eEEEEEecCCCceEEEEEecCccc---eEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCC--------CC
Confidence 489999999999999998865321 11111111 111 1123356789999999998876531 12
Q ss_pred cccceeEE----eeeeec
Q 038487 171 EKKLGYTW----SHSVDQ 184 (472)
Q Consensus 171 ~l~lGfTF----SFP~~Q 184 (472)
..-+|++- .-|++.
T Consensus 74 i~~Igis~q~~~~v~~D~ 91 (489)
T 2uyt_A 74 IDSIGIDTWGVDFVLLDQ 91 (489)
T ss_dssp CCEEEEEECSSCEEEECT
T ss_pred ceEEEEecCcccEEEECC
Confidence 23466666 566664
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=87.33 E-value=0.59 Score=49.16 Aligned_cols=57 Identities=11% Similarity=0.037 Sum_probs=39.6
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeecc-C-CcccccChhHHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISI-P-SDVMCCTSQELFDYIAGEFAKFV 157 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~I-p-~~~~~~~~~~lFd~IA~~i~~fl 157 (472)
.||+||+|+|+.|++++.-.| +++......+++ | +.....+.+++++.+.++|.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G---~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG---RMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS---CEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCC---cEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 489999999999999998443 344433333332 1 22334568999999999999876
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=82.22 E-value=2.5 Score=44.64 Aligned_cols=53 Identities=8% Similarity=0.101 Sum_probs=37.3
Q ss_pred cEEEEEeCCCeeEEEEEEe-CCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARL-GGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKF 156 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L-~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~f 156 (472)
.+|+||+|+|+.|++++.+ .| +++.... .+.|. ....+.+++++.+.+++.+.
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G---~i~~~~~--~~~~g-~~e~d~~~~~~~i~~~l~~~ 59 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG---ELVRFGQ--AKHPN-GTSVDPSYWWSAFQEAAEQA 59 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC---CEEEEEE--EECCS-SSEECTHHHHHHHHHHHHHT
T ss_pred EEEEEEeccccEEEEEEECCCC---eEEEEEE--EeCCC-CceECHHHHHHHHHHHHHhc
Confidence 5899999999999999994 44 3444332 33343 23456788999988888753
No 52
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=73.51 E-value=3.6 Score=39.82 Aligned_cols=50 Identities=18% Similarity=0.127 Sum_probs=31.3
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHHhcCC
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFVNAHP 161 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (472)
-+|+||+|+||.++++++ ++ ++. ..|++|-. ..+.+++ +..+.++++..+
T Consensus 3 MlL~IDIGNT~iK~gl~d--~~--~l~----~~~r~~T~--~~t~de~----~~~l~~ll~~~~ 52 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD--GD--EIK----LRFRHTSK--VSTSDEL----GIFLKSVLRENN 52 (266)
T ss_dssp CEEEEEECSSEEEEEEEE--TT--EEE----EEEEEECS--CCCHHHH----HHHHHHHHHTTT
T ss_pred eEEEEEECCCeEEEEEEE--CC--EEE----EEEEecCC--CCCHHHH----HHHHHHHHHHcC
Confidence 379999999999999985 21 222 24566644 3345554 444555665543
No 53
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=68.39 E-value=23 Score=35.43 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhcCCCceEEEEEecchhhhhccccC
Q 038487 207 TLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFY 242 (472)
Q Consensus 207 dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~ 242 (472)
.-.+.+++|..+-|+ +++.++|+.+|..++....
T Consensus 164 ~~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~ 197 (409)
T 4gni_A 164 KQKAALIAAAAAADL--EVLQLISEPAAAVLAYDAR 197 (409)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcc
Confidence 345677888888777 5678999999998876554
No 54
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=67.34 E-value=5.9 Score=37.77 Aligned_cols=47 Identities=13% Similarity=0.180 Sum_probs=29.4
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEF 153 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i 153 (472)
-+|+||+|+||+++++++ ++ ++.. .|++|-. ...+.+++..++.+.+
T Consensus 4 M~L~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~l~ 50 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE--DG--KTFR----RWRLSTG-VFQTEDELFSHLHPLL 50 (249)
T ss_dssp EEEEEEECSSEEEEEEES--SS--SSCE----EEEEECC-TTCCHHHHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEE--CC--EEEE----EEEecCC-CCCCHHHHHHHHHHHH
Confidence 379999999999999985 22 2222 3444422 1245577776666544
No 55
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=66.52 E-value=65 Score=29.84 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=20.5
Q ss_pred HHHHHHHhcCCCceEEEEEecchhhhhcccc
Q 038487 211 NINQALAKHDLNMRVYALVDDTIGSLAGGRF 241 (472)
Q Consensus 211 lL~~al~r~~l~v~v~aivNDTVaTlla~~y 241 (472)
.+++++++.|++ +..++++.+|.+.+...
T Consensus 110 ~~~~~~~~~g~~--~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAGLE--LVTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTTCE--EEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcCCe--eeecccHHHHHHHHHcC
Confidence 456677766654 56789999999876543
No 56
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=64.54 E-value=35 Score=33.60 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcCCCceEEEEEecchhhhhcccc
Q 038487 208 LVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF 241 (472)
Q Consensus 208 v~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y 241 (472)
-.+.+.+|..+-|+ +++.++|+.+|..++...
T Consensus 168 ~r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~ 199 (394)
T 3qfu_A 168 QRQATKDAGTIAGL--NVLRIVNEPTAAAIAYGL 199 (394)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCC--ceEEEecCHHHHHHHHhh
Confidence 34667777777776 567899999999887533
No 57
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=63.72 E-value=31 Score=34.31 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCCceEEEEEecchhhhhcccc
Q 038487 208 LVTNINQALAKHDLNMRVYALVDDTIGSLAGGRF 241 (472)
Q Consensus 208 v~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y 241 (472)
-.+.+++|..+-|+ +++.++|..+|..++...
T Consensus 173 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~ 204 (404)
T 3i33_A 173 QRQATKDAGTITGL--NVLRIINEPTAAAIAYGL 204 (404)
T ss_dssp HHHHHHHHHHHHTC--EEEEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCC--CeEEEeccHHHHHHHHHh
Confidence 34667778777777 567899999999887544
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=53.88 E-value=19 Score=34.56 Aligned_cols=46 Identities=9% Similarity=0.066 Sum_probs=28.2
Q ss_pred EEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHH
Q 038487 99 YYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEF 153 (472)
Q Consensus 99 fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i 153 (472)
+|+||.|.||+++++++ ++ +... .|+++... ..+.+++..++.+.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~~-~~t~de~~~~l~~ll 47 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELRQ----HWRMETDR-HKTEDEYGMLVKQLL 47 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEE----EEEEECCT-TCCHHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEEE----EEEecCCC-cCCHHHHHHHHHHHH
Confidence 69999999999999986 22 2222 34444221 234566666655543
No 59
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=49.90 E-value=34 Score=35.96 Aligned_cols=31 Identities=3% Similarity=-0.012 Sum_probs=23.2
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeee
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEI 131 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~ 131 (472)
-||+||+|.|+.|++++...| .++...+..|
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G---~vv~~~~~~~ 41 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL---NVFYEESVHF 41 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC---CEEEEEEEEH
T ss_pred EEEEEEEcCcCEEEEEECCCC---CEEEEEEEec
Confidence 589999999999999998654 3444444444
No 60
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=38.70 E-value=1.5e+02 Score=31.58 Aligned_cols=124 Identities=13% Similarity=0.169 Sum_probs=0.0
Q ss_pred ccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccCh----------------------------------
Q 038487 97 GLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTS---------------------------------- 142 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~---------------------------------- 142 (472)
+..++||||.||-.|+.+ .++...++........+|.-+--...
T Consensus 2 ~~viGIDlGTT~S~Va~~--~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d 79 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIM--DGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (605)
T ss_dssp CCEEEEECCSSEEEEEEE--ETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTS
T ss_pred CcEEEEEcCCCcEEEEEE--ECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCC
Q ss_pred -------------------------------------hHHHHHHHHHHHHHHhcCCCCCCCCccccccceeEEeeeeecc
Q 038487 143 -------------------------------------QELFDYIAGEFAKFVNAHPDNGNDTSAKEKKLGYTWSHSVDQV 185 (472)
Q Consensus 143 -------------------------------------~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Qt 185 (472)
..++.++.+...+++.. -.-.+.++-|..
T Consensus 80 ~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~------------~v~~~VITVPa~-- 145 (605)
T 4b9q_A 80 EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE------------PVTEAVITVPAY-- 145 (605)
T ss_dssp HHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS------------CCCEEEEEECTT--
T ss_pred HHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC------------CCCeEEEEECCC--
Q ss_pred cCCCcEEeeecccccCCCCCchHHHHHHHHHHhcCCCceEEEEEecchhhhhccccCC---CCceEEEEeCCcc
Q 038487 186 TTLSPSAIKWKNFAANDTVEETLVTNINQALAKHDLNMRVYALVDDTIGSLAGGRFYN---RDCVAAVTLGTGT 256 (472)
Q Consensus 186 ~l~~g~Li~wKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~~y~~---~~~~iGlIlGTGt 256 (472)
....-.+.+.+|...-|+ +++.++|+.+|.-++..... +...+=+=+|-||
T Consensus 146 ------------------f~~~qr~a~~~Aa~~AGl--~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT 199 (605)
T 4b9q_A 146 ------------------FNDAQRQATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGA 199 (605)
T ss_dssp ------------------CCHHHHHHHHHHHHHTTC--EEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSC
T ss_pred ------------------CCHHHHHHHHHHHHHcCC--ceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCe
No 61
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=37.15 E-value=46 Score=32.71 Aligned_cols=52 Identities=13% Similarity=0.059 Sum_probs=33.6
Q ss_pred ccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHH
Q 038487 95 EKGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAK 155 (472)
Q Consensus 95 E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~ 155 (472)
+.|.++.+|+||.++=|+.++++++. ++...+ ..+| . -++++-++|++.|..
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~~s--~~~~----l-Gg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVELS--FSLQ----I-GVGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGGGC--EEES----C-CHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEeecC--CCcc----h-hHHHHHHHHHHHHHH
Confidence 44778999999999999999996532 111111 1222 1 246777888776643
No 62
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=35.68 E-value=23 Score=33.66 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCccceEEEEecceeeecHhHHHHHHHHHH
Q 038487 393 REAVVEVCDIVTERAARLAAAGIVGIIKKLGRIELKKSVVNVEGGLYEHYRIFRNYLHSSVW 454 (472)
Q Consensus 393 ~~~vr~I~~~V~~RaA~L~Aa~iaail~~~~~~~~~~~~V~vdGS~~~~~p~y~~~l~~~l~ 454 (472)
..+++.+++.|..+-+ .+++..+. .-.|.+.|++.. .|.+++.+.+.+.
T Consensus 185 ~di~~av~e~Va~~i~--------~~~~~~~~----~~~i~~~GG~a~-n~~~~~~~~~~lg 233 (270)
T 1hux_A 185 IDIIAGIHRSVASRVI--------GLANRVGI----VKDVVMTGGVAQ-NYGVRGALEEGLG 233 (270)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----CSSEEEESGGGG-CHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH--------HHHhcCCC----CCeEEEeCcccc-CHHHHHHHHHHHC
Confidence 4677788888877642 22333221 113777888664 6888888877764
No 63
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=35.58 E-value=88 Score=30.45 Aligned_cols=61 Identities=11% Similarity=0.093 Sum_probs=39.3
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCccc-ccC-hhHHHHHHHHHHHHHHh
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVM-CCT-SQELFDYIAGEFAKFVN 158 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~~-~~~lFd~IA~~i~~fl~ 158 (472)
.|-|||+|-.++|..++++.++...++....+..++-+.+- ++. .++=.+-..+++..|.+
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~ 67 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRV 67 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHH
Confidence 47899999999999999996544444443333444444442 121 34556777777777754
No 64
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=34.36 E-value=88 Score=32.72 Aligned_cols=73 Identities=7% Similarity=-0.078 Sum_probs=40.0
Q ss_pred cccccCccCCCCcccccEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCccc-ccC-hhHHHHHHHHHHHHH
Q 038487 82 MLLSYLASLPNGEEKGLYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVM-CCT-SQELFDYIAGEFAKF 156 (472)
Q Consensus 82 MlPS~v~~lP~G~E~G~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~~-~~~lFd~IA~~i~~f 156 (472)
|=|.+.. |.-...-.|=|||+|-.++|..+++..++...++.......++-+.+. ++. .++=.+-..+|+..|
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F 76 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRF 76 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHH
Confidence 4455532 322333468899999999999999986544444433322344444432 111 234445555556555
No 65
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=34.17 E-value=53 Score=32.14 Aligned_cols=31 Identities=19% Similarity=0.050 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHhcCCCceEEEEEecchhhhhcc
Q 038487 207 TLVTNINQALAKHDLNMRVYALVDDTIGSLAGG 239 (472)
Q Consensus 207 dv~~lL~~al~r~~l~v~v~aivNDTVaTlla~ 239 (472)
+.++-+.+++++-|++ +..++|..+|...+.
T Consensus 151 ~~v~~~~~~~~~aGl~--~~~i~~ep~Aaa~~~ 181 (377)
T 2ych_A 151 EAVAGVLEALRGAGLV--PVVLDVKPFAGLYPL 181 (377)
T ss_dssp HHHHHHHHHHHHTTCE--EEEEEEHHHHTTGGG
T ss_pred HHHHHHHHHHHHCCCc--eEEEecchHHHHHHH
Confidence 4567778888777665 567999999987764
No 66
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=30.63 E-value=37 Score=33.29 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=30.3
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKF 156 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~f 156 (472)
.++|+|-|.||||+-++. +| .+..+.. -|..++.-+..+|=.-+.+.+.++
T Consensus 7 ~~IavDWGTs~lRa~l~~-~g---~vl~~~~----~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ-GE---ECLESRQ----SEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp EEEEEEECSSCEEEEEEE-TT---EEEEEEE----ESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred cEEEEEecchheeeeeec-CC---ceehhhc----CCCchhhcCcccHHHHHHHHHHHh
Confidence 589999999999999887 33 3444332 244444333334444455555444
No 67
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=29.07 E-value=34 Score=32.15 Aligned_cols=36 Identities=8% Similarity=0.165 Sum_probs=23.8
Q ss_pred EEEecchhhhhccccCCCCceEEEEeCC-ccceeeec
Q 038487 227 ALVDDTIGSLAGGRFYNRDCVAAVTLGT-GTNAAYVE 262 (472)
Q Consensus 227 aivNDTVaTlla~~y~~~~~~iGlIlGT-GtNacY~e 262 (472)
-.||.-+|-.++..+.++....-+.+|- |+...+++
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEEC
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEE
Confidence 3679988888887777666555555555 45555554
No 68
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=28.40 E-value=46 Score=33.17 Aligned_cols=53 Identities=9% Similarity=0.205 Sum_probs=32.5
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKFV 157 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl 157 (472)
.++|+|=|.||||+-++.-+| .+..+. .-+..++.....+|-+-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~~g---~vl~~~----~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGEDG---AVLAER----RSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECTTS---CEEEEE----EESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecCCC---Cchhhh----cCCcchhhcCcccHHHHHHHHHHHhh
Confidence 589999999999998764432 344332 23554443333445555666666664
No 69
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=27.48 E-value=63 Score=33.42 Aligned_cols=48 Identities=13% Similarity=0.321 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccCCCCCccccccccCccCCCCcccccEEEEE
Q 038487 51 TPVPRLWQVANALVSEMQASLASNETTTDLNMLLSYLASLPNGEEKGLYYGIN 103 (472)
Q Consensus 51 ~~~~~L~~i~~~f~~em~~GL~~~~~s~~l~MlPS~v~~lP~G~E~G~fLAlD 103 (472)
+|+..+.+|.+-+.+++++-.+.- .+.|++++...+|+..+ ..++|+|
T Consensus 24 is~~~~~~I~~~L~~~l~~~~~~~----~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 24 LSKQSIERITKILLDELENVRENE----QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCS----SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhh----chhhhhhhceECCCCCC-ceEEEec
Confidence 899999999999999998876543 58899999999997744 4788888
No 70
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=27.40 E-value=1.1e+02 Score=29.77 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=36.0
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccc-cC-hhHHHHHHHHHHHHHHh
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMC-CT-SQELFDYIAGEFAKFVN 158 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~ 158 (472)
.|-+||+|-+++|+.+++..++....+....+..++-+.+.. +. .++=.+-..+++.+|.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~ 75 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKK 75 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHH
Confidence 588999999999999999964333333333223333333321 11 23444556667777754
No 71
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=25.76 E-value=89 Score=30.57 Aligned_cols=25 Identities=8% Similarity=0.016 Sum_probs=20.9
Q ss_pred ccccEEEEEeCCCeeEEEEEEeCCC
Q 038487 95 EKGLYYGINLRATDFLILCARLGGK 119 (472)
Q Consensus 95 E~G~fLAlDlGGTnlRV~~V~L~g~ 119 (472)
....++.+|+||.++-+..+++.+.
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~~~~~~ 228 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLLSIENG 228 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCceEEEEEcCCCceeEEEEEEeCC
Confidence 3446899999999999999998653
No 72
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=25.40 E-value=84 Score=34.13 Aligned_cols=23 Identities=0% Similarity=-0.019 Sum_probs=20.2
Q ss_pred ccEEEEEeCCCeeEEEEEEeCCC
Q 038487 97 GLYYGINLRATDFLILCARLGGK 119 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L~g~ 119 (472)
..++.+|+||.++-|.++++.++
T Consensus 197 ~~vlV~DlGGGT~Dvsv~~~~~g 219 (675)
T 3d2f_A 197 RIVAFVDIGHSSYTCSIMAFKKG 219 (675)
T ss_dssp EEEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEEcCCCcEEEEEEEecCC
Confidence 46999999999999999999643
No 73
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=23.66 E-value=1.3e+02 Score=23.49 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 5 QLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56666777778999999999999999999999864
No 74
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=22.80 E-value=1.4e+02 Score=31.77 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=19.8
Q ss_pred cccEEEEEeCCCeeEEEEEEeC
Q 038487 96 KGLYYGINLRATDFLILCARLG 117 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~ 117 (472)
...+|.+|+||.++-|.++++.
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~~ 208 (605)
T 2kho_A 187 NRTIAVYDLGGGTFDISIIEID 208 (605)
T ss_dssp EEEEEEEEECSSCEEEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEEEE
Confidence 4569999999999999999996
No 75
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=22.53 E-value=1.3e+02 Score=23.71 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 5 ELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45566666677999999999999999999999864
No 76
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=22.08 E-value=1.3e+02 Score=23.29 Aligned_cols=35 Identities=9% Similarity=0.281 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1b8z_A 5 ELIDRVAKKAGAKKKDVKLILDTILETITEALAKG 39 (90)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45566666677999999999999999999999864
No 77
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=21.79 E-value=1.3e+02 Score=23.75 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45556666667999999999999999999999864
No 78
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=21.59 E-value=1e+02 Score=30.47 Aligned_cols=23 Identities=4% Similarity=-0.112 Sum_probs=20.1
Q ss_pred ccEEEEEeCCCeeEEEEEEeCCC
Q 038487 97 GLYYGINLRATDFLILCARLGGK 119 (472)
Q Consensus 97 G~fLAlDlGGTnlRV~~V~L~g~ 119 (472)
..++.+|+||.++-+.++++.++
T Consensus 205 ~~vlv~D~GgGT~dvsv~~~~~~ 227 (409)
T 4gni_A 205 KIIVVADLGGSRSDVTVLASRSG 227 (409)
T ss_dssp EEEEEEEECSSCEEEEEEEEETT
T ss_pred CEEEEEECCCCceEEEEEEEeCC
Confidence 36999999999999999999654
No 79
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=21.54 E-value=1.3e+02 Score=23.46 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 2o97_B 5 QLIDKIAAGADISKAAAGRALDAIIASVTESLKEG 39 (90)
T ss_dssp HHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 56667777778999999999999999999999864
No 80
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=21.35 E-value=1.1e+02 Score=30.27 Aligned_cols=24 Identities=8% Similarity=-0.003 Sum_probs=20.4
Q ss_pred cccEEEEEeCCCeeEEEEEEeCCC
Q 038487 96 KGLYYGINLRATDFLILCARLGGK 119 (472)
Q Consensus 96 ~G~fLAlDlGGTnlRV~~V~L~g~ 119 (472)
...++.+|+||.++-+..+++.++
T Consensus 213 ~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 213 EKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEEECSSCEEEEEEEEETT
T ss_pred CceEEEEECCCCcEEEEEEEEeCC
Confidence 346899999999999999998654
No 81
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=21.14 E-value=1.4e+02 Score=23.80 Aligned_cols=35 Identities=3% Similarity=0.114 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 038487 40 TILRKFARECATPVPRLWQVANALVSEMQASLASN 74 (472)
Q Consensus 40 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 74 (472)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~g 39 (99)
T 3c4i_A 5 ELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKG 39 (99)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45566666667999999999999999999999864
No 82
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=20.77 E-value=1.6e+02 Score=25.76 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=32.1
Q ss_pred cEEEEEeCCCeeEEEEEEeCCCCccceeeeeeeeccCCcccccChhHHHHHHHHHHHHH
Q 038487 98 LYYGINLRATDFLILCARLGGKNEPISDLHREEISIPSDVMCCTSQELFDYIAGEFAKF 156 (472)
Q Consensus 98 ~fLAlDlGGTnlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~f 156 (472)
+.|.||-|-++.=.+.++..|+....+. +-....+..-...--..+|+++.+.|.++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~--~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLG--SGCIRTKVDDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEE--EEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEE--eeEEECCCCCHHHHHHHHHHHHHHHHHHc
Confidence 3689999999999999988664322221 11222331101111245677777666655
Done!