Citrus Sinensis ID: 038490

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
KPTSSIRLACLPRLQKDPKLALQLFKNPNPNPNDTEAHPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRIVPKEIIFCNVIGFYGRARLLERALQMFDEMSSFNVQMTVKFFNTLLNPKLTCGKLDRMKELFQIMEKYVSPDACSYNILIHGCVVSRRLEDAWKVFDEMVKRRLQPTLVTFGTLIYGLCLELRVDEALKLKEDIMRVYNVKPDGQVFASLIKGLCAVGELSLALGVKEEMVRDKIEMDAGIYSSLISALFKAGRKNEFPAILKEMKERGCKPNSVTYNALISGFCKEEDFEAAFTILDEMGDKGCKANPISYNVILGGLCKDGKC
cccHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccc
KPTSSIRLACLPRLQKDPKLALQLFKNPNPNPNDTEAHPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRIVPKEIIFCNVIGFYGRARLLERALQMFDEMSSFNVQMTVKFFNTLLNPKLTCGKLDRMKELFQIMEKYVSPDACSYNILIHGCVVSRRLEDAWKVFDEMVKRRLQPTLVTFGTLIYGLCLELRVDEALKLKEDIMRVYNVKPDGQVFASLIKGLCAVGELSLALGVKEEMVRDKIEMDAGIYSSLISALFKAGRKNEFPAILKEMKERGCKPNSVTYNALISGFCKEEDFEAAFTILDEMGDKGCKANPISYNVILGGLCKDGKC
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KPTSSIRLACLPRLQKDPKLALQLFKNPNPNPNDTEAHPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRIVPKEIIFCNVIGFYGRARLLERALQMFDEMSSFNVQMTVKFFNTLLNPKLTCGKLDRMKELFQIMEKYVSPDACSYNILIHGCVVSRRLEDAWKVFDEMVKRRLQPTLVTFGTLIYGLCLELRVDEALKLKEDIMRVYNVKPDGQVFASLIKGLCAVGELSLALGVKEEMVRDKIEMDAGIYSSLISALFKAGRKNEFPAILKEMKERGCKPNSVTYNALISGFCKEEDFEAAFTILDEMGDKGCKANPISYNVILGGLCKDGKC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative pentatricopeptide repeat-containing protein At1g53330 Involved during embryo development.probableQ9MAG8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 184-342
View the alignment between query and template
View the model in PyMOL
Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 152-306
View the alignment between query and template
View the model in PyMOL
Template: 2XPI, chain A
Confidence level:confident
Coverage over the Query: 3-344
View the alignment between query and template
View the model in PyMOL