Query 038498
Match_columns 248
No_of_seqs 102 out of 1105
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 11:39:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038498.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038498hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00174 phosphomannomutase; P 100.0 3.7E-41 8.1E-46 280.3 25.9 244 4-247 2-247 (247)
2 PLN02423 phosphomannomutase 100.0 1.4E-38 3.1E-43 264.1 26.2 243 1-243 1-243 (245)
3 COG0561 Cof Predicted hydrolas 100.0 1.5E-38 3.2E-43 267.4 20.5 232 5-247 1-247 (264)
4 KOG3189 Phosphomannomutase [Li 100.0 4.7E-39 1E-43 247.4 15.8 242 2-243 6-249 (252)
5 PRK10513 sugar phosphate phosp 100.0 3.1E-38 6.7E-43 266.2 20.1 231 6-247 2-254 (270)
6 PRK10976 putative hydrolase; P 100.0 6.7E-38 1.4E-42 263.6 18.1 227 7-246 2-249 (266)
7 PRK15126 thiamin pyrimidine py 100.0 9.2E-38 2E-42 263.7 18.2 227 7-246 2-247 (272)
8 PLN02887 hydrolase family prot 100.0 4E-36 8.6E-41 273.5 19.0 231 5-247 306-565 (580)
9 PF08282 Hydrolase_3: haloacid 100.0 9.5E-36 2.1E-40 247.0 17.5 225 10-247 1-244 (254)
10 PRK10530 pyridoxal phosphate ( 100.0 5.7E-35 1.2E-39 246.4 18.9 228 6-247 2-257 (272)
11 PF03332 PMM: Eukaryotic phosp 100.0 8.5E-35 1.8E-39 230.5 15.8 216 29-244 1-219 (220)
12 PRK01158 phosphoglycolate phos 100.0 6E-34 1.3E-38 234.5 20.9 206 6-247 2-215 (230)
13 TIGR00099 Cof-subfamily Cof su 100.0 1.1E-33 2.3E-38 236.8 18.8 226 9-247 1-246 (256)
14 PRK03669 mannosyl-3-phosphogly 100.0 5.4E-33 1.2E-37 234.4 15.9 230 2-248 2-255 (271)
15 TIGR01482 SPP-subfamily Sucros 100.0 1.6E-31 3.5E-36 219.3 19.0 199 10-247 1-207 (225)
16 TIGR01487 SPP-like sucrose-pho 100.0 6.6E-31 1.4E-35 214.5 18.0 199 7-247 1-205 (215)
17 PRK00192 mannosyl-3-phosphogly 100.0 6.1E-30 1.3E-34 216.0 17.2 220 5-245 2-252 (273)
18 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 1.4E-29 3.1E-34 211.9 16.6 219 9-247 1-242 (256)
19 TIGR01485 SPP_plant-cyano sucr 100.0 3.6E-29 7.8E-34 208.7 15.8 198 8-242 2-221 (249)
20 TIGR02471 sucr_syn_bact_C sucr 100.0 3.4E-29 7.4E-34 207.2 13.1 208 9-247 1-221 (236)
21 PLN02382 probable sucrose-phos 100.0 4.5E-28 9.8E-33 214.5 16.3 212 5-245 7-235 (413)
22 PRK10187 trehalose-6-phosphate 100.0 3.4E-27 7.3E-32 198.2 19.6 195 7-236 14-225 (266)
23 TIGR02463 MPGP_rel mannosyl-3- 99.9 4.3E-27 9.4E-32 192.7 15.6 205 9-231 1-221 (221)
24 PRK14502 bifunctional mannosyl 99.9 1.1E-25 2.3E-30 205.1 19.8 214 5-236 414-662 (694)
25 TIGR01484 HAD-SF-IIB HAD-super 99.9 2.1E-25 4.5E-30 180.5 17.5 192 9-230 1-204 (204)
26 PF05116 S6PP: Sucrose-6F-phos 99.9 1.5E-26 3.2E-31 192.3 10.7 204 7-236 2-212 (247)
27 TIGR02461 osmo_MPG_phos mannos 99.9 5.2E-25 1.1E-29 180.6 16.5 199 9-231 1-225 (225)
28 PRK14501 putative bifunctional 99.9 3.3E-23 7.2E-28 196.1 20.3 209 5-247 490-712 (726)
29 TIGR00685 T6PP trehalose-phosp 99.9 1.2E-22 2.7E-27 168.7 17.5 212 6-248 2-232 (244)
30 PRK12702 mannosyl-3-phosphogly 99.9 3E-22 6.5E-27 166.4 16.2 212 7-235 1-256 (302)
31 PLN02580 trehalose-phosphatase 99.9 1.5E-20 3.2E-25 163.1 18.8 210 4-246 116-364 (384)
32 PLN02205 alpha,alpha-trehalose 99.9 3.6E-20 7.9E-25 176.2 19.8 195 4-224 593-801 (854)
33 PLN03017 trehalose-phosphatase 99.8 2.5E-19 5.4E-24 154.2 19.6 211 5-246 109-346 (366)
34 PLN02151 trehalose-phosphatase 99.8 1.2E-17 2.5E-22 143.5 19.2 198 5-233 96-321 (354)
35 PF02358 Trehalose_PPase: Treh 99.8 1.2E-17 2.5E-22 138.2 16.8 213 11-248 1-234 (235)
36 COG1877 OtsB Trehalose-6-phosp 99.7 1E-15 2.2E-20 126.9 20.1 190 5-224 16-218 (266)
37 PLN03063 alpha,alpha-trehalose 99.7 3E-15 6.5E-20 142.5 20.1 193 5-224 505-721 (797)
38 PLN03064 alpha,alpha-trehalose 99.7 3E-15 6.5E-20 142.6 19.7 192 5-223 589-810 (934)
39 COG3769 Predicted hydrolase (H 99.6 8.3E-15 1.8E-19 115.6 11.6 213 1-232 1-236 (274)
40 PRK11133 serB phosphoserine ph 99.5 6.9E-15 1.5E-19 126.4 0.9 55 187-247 246-305 (322)
41 TIGR02726 phenyl_P_delta pheny 99.4 9.1E-13 2E-17 103.1 8.3 43 200-247 98-140 (169)
42 TIGR01670 YrbI-phosphatas 3-de 99.4 6.5E-13 1.4E-17 102.7 7.4 44 200-248 92-135 (154)
43 PRK09484 3-deoxy-D-manno-octul 99.4 6.1E-13 1.3E-17 105.8 6.5 42 200-246 112-153 (183)
44 TIGR02468 sucrsPsyn_pln sucros 99.3 2E-11 4.3E-16 117.4 15.1 197 7-232 770-1002(1050)
45 smart00775 LNS2 LNS2 domain. T 99.3 1.1E-11 2.3E-16 96.0 7.4 93 9-103 1-113 (157)
46 PF06437 ISN1: IMP-specific 5' 99.2 1.5E-10 3.4E-15 98.6 13.4 208 6-238 146-406 (408)
47 TIGR01689 EcbF-BcbF capsule bi 99.0 9.5E-10 2.1E-14 81.5 7.3 46 7-52 1-53 (126)
48 cd01427 HAD_like Haloacid deha 99.0 1.3E-09 2.9E-14 81.1 7.5 51 9-59 1-60 (139)
49 KOG1050 Trehalose-6-phosphate 99.0 1.7E-08 3.6E-13 94.7 15.5 187 3-223 499-692 (732)
50 COG0560 SerB Phosphoserine pho 99.0 3.3E-09 7.2E-14 86.2 9.0 89 151-245 99-199 (212)
51 PRK13288 pyrophosphatase PpaX; 98.9 1.3E-09 2.8E-14 88.7 5.6 46 184-233 134-184 (214)
52 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.9 7.1E-09 1.5E-13 86.4 9.2 70 7-77 1-75 (249)
53 TIGR01684 viral_ppase viral ph 98.8 1.4E-08 3.1E-13 84.9 8.1 72 6-78 125-201 (301)
54 TIGR00338 serB phosphoserine p 98.8 6.9E-08 1.5E-12 78.7 10.2 53 189-247 152-209 (219)
55 COG1778 Low specificity phosph 98.7 6.3E-09 1.4E-13 78.4 2.1 55 188-247 82-141 (170)
56 PRK13223 phosphoglycolate phos 98.7 6.9E-09 1.5E-13 87.7 2.5 46 184-233 153-203 (272)
57 PRK10826 2-deoxyglucose-6-phos 98.7 3.6E-08 7.7E-13 80.7 6.5 59 184-246 144-210 (222)
58 PRK13222 phosphoglycolate phos 98.7 1.6E-08 3.4E-13 82.7 4.1 41 188-232 149-194 (226)
59 TIGR02137 HSK-PSP phosphoserin 98.7 2.2E-08 4.7E-13 80.9 4.6 54 186-245 129-183 (203)
60 PRK13226 phosphoglycolate phos 98.7 1.6E-08 3.4E-13 83.3 3.8 40 189-232 152-196 (229)
61 PHA03398 viral phosphatase sup 98.7 9.6E-08 2.1E-12 80.1 8.0 73 5-78 126-203 (303)
62 COG0546 Gph Predicted phosphat 98.6 2E-08 4.3E-13 82.2 3.6 92 148-247 108-209 (220)
63 TIGR01449 PGP_bact 2-phosphogl 98.6 2.9E-08 6.4E-13 80.4 3.3 55 188-246 141-204 (213)
64 PRK13225 phosphoglycolate phos 98.6 6.6E-08 1.4E-12 81.6 5.0 54 189-246 196-258 (273)
65 TIGR01422 phosphonatase phosph 98.6 3.4E-08 7.4E-13 82.4 2.8 30 200-233 174-203 (253)
66 PRK11590 hypothetical protein; 98.5 1.2E-06 2.6E-11 71.2 11.4 49 185-239 159-209 (211)
67 PRK13582 thrH phosphoserine ph 98.5 3.7E-07 7.9E-12 73.6 8.1 45 185-234 128-173 (205)
68 PRK11587 putative phosphatase; 98.5 1.1E-07 2.5E-12 77.5 5.0 31 200-234 155-185 (218)
69 PLN02770 haloacid dehalogenase 98.5 1.3E-07 2.8E-12 78.8 4.5 29 200-232 181-209 (248)
70 PRK10671 copA copper exporting 98.5 7.2E-08 1.6E-12 93.4 3.0 79 152-245 673-752 (834)
71 PLN03243 haloacid dehalogenase 98.5 1.3E-07 2.8E-12 79.4 4.0 39 190-232 167-210 (260)
72 TIGR03351 PhnX-like phosphonat 98.5 2.3E-07 5E-12 75.6 5.4 41 189-233 146-193 (220)
73 PRK13478 phosphonoacetaldehyde 98.5 1E-07 2.2E-12 80.2 3.2 30 200-233 176-205 (267)
74 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 3.3E-06 7.2E-11 67.6 9.3 49 188-242 146-199 (201)
75 PLN02954 phosphoserine phospha 98.3 1.7E-06 3.7E-11 70.7 7.3 57 186-247 152-215 (224)
76 PLN02575 haloacid dehalogenase 98.3 3.6E-07 7.7E-12 80.1 3.4 42 189-234 273-319 (381)
77 PLN02779 haloacid dehalogenase 98.3 7.2E-07 1.6E-11 75.9 4.5 41 189-233 203-248 (286)
78 TIGR01488 HAD-SF-IB Haloacid D 98.3 6.6E-07 1.4E-11 70.3 3.3 36 184-223 137-177 (177)
79 TIGR02253 CTE7 HAD superfamily 98.2 1.5E-06 3.3E-11 70.7 5.2 41 190-234 152-198 (221)
80 PRK10725 fructose-1-P/6-phosph 98.2 5.7E-07 1.2E-11 71.4 2.1 41 187-231 141-186 (188)
81 PRK06698 bifunctional 5'-methy 98.2 8.6E-07 1.9E-11 80.4 3.3 40 189-232 386-428 (459)
82 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.2 1.3E-06 2.9E-11 73.1 4.2 53 7-59 1-60 (257)
83 PRK09552 mtnX 2-hydroxy-3-keto 98.2 2.6E-05 5.7E-10 63.6 11.0 37 188-229 147-184 (219)
84 TIGR02009 PGMB-YQAB-SF beta-ph 98.2 1.1E-06 2.3E-11 69.5 2.6 37 190-230 144-185 (185)
85 PRK10444 UMP phosphatase; Prov 98.2 2.1E-06 4.5E-11 71.5 4.4 52 7-59 1-56 (248)
86 PLN02645 phosphoglycolate phos 98.2 3.4E-06 7.4E-11 72.6 5.7 53 5-58 26-82 (311)
87 TIGR01681 HAD-SF-IIIC HAD-supe 98.1 6.8E-06 1.5E-10 61.4 5.8 44 8-51 1-57 (128)
88 TIGR01454 AHBA_synth_RP 3-amin 98.1 3.4E-06 7.3E-11 68.1 4.0 56 188-247 131-195 (205)
89 PRK14988 GMP/IMP nucleotidase; 98.0 5.8E-06 1.3E-10 67.8 4.4 43 190-236 151-199 (224)
90 TIGR01452 PGP_euk phosphoglyco 98.0 1.1E-05 2.3E-10 68.5 5.6 52 6-58 1-56 (279)
91 PLN02940 riboflavin kinase 98.0 4.1E-06 8.9E-11 74.1 3.2 43 188-234 150-197 (382)
92 PRK08238 hypothetical protein; 98.0 2.6E-05 5.6E-10 70.9 7.7 78 155-242 98-175 (479)
93 TIGR03333 salvage_mtnX 2-hydro 97.9 0.0002 4.4E-09 58.2 12.1 40 187-231 142-182 (214)
94 TIGR01664 DNA-3'-Pase DNA 3'-p 97.9 2.4E-05 5.1E-10 61.2 6.3 46 5-50 11-69 (166)
95 TIGR01545 YfhB_g-proteo haloac 97.9 4.7E-05 1E-09 61.8 8.2 48 185-238 158-207 (210)
96 TIGR01662 HAD-SF-IIIA HAD-supe 97.9 1.6E-05 3.6E-10 59.4 5.1 42 8-49 1-51 (132)
97 TIGR02254 YjjG/YfnB HAD superf 97.8 2E-05 4.3E-10 64.1 4.0 37 192-232 160-199 (224)
98 TIGR01990 bPGM beta-phosphoglu 97.7 1.6E-05 3.4E-10 62.8 2.2 40 188-231 141-185 (185)
99 TIGR01672 AphA HAD superfamily 97.7 9.5E-05 2.1E-09 61.0 6.7 44 6-49 62-140 (237)
100 TIGR02252 DREG-2 REG-2-like, H 97.7 0.0001 2.2E-09 59.2 6.4 32 192-227 164-201 (203)
101 TIGR01460 HAD-SF-IIA Haloacid 97.6 8.3E-05 1.8E-09 61.5 5.3 63 10-73 1-69 (236)
102 PHA02597 30.2 hypothetical pro 97.6 6.6E-05 1.4E-09 60.1 4.6 43 189-235 131-178 (197)
103 TIGR01656 Histidinol-ppas hist 97.6 9E-05 2E-09 56.6 4.1 42 8-49 1-53 (147)
104 TIGR01116 ATPase-IIA1_Ca sarco 97.5 9.1E-05 2E-09 72.7 4.7 54 188-246 617-671 (917)
105 TIGR01668 YqeG_hyp_ppase HAD s 97.5 0.0003 6.5E-09 55.2 6.4 46 5-50 23-70 (170)
106 TIGR01428 HAD_type_II 2-haloal 97.5 0.00021 4.5E-09 57.2 5.5 39 190-232 150-193 (198)
107 TIGR01549 HAD-SF-IA-v1 haloaci 97.5 0.00019 4.2E-09 54.9 4.9 33 187-224 117-154 (154)
108 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.4 0.00033 7.1E-09 58.1 6.2 46 5-51 6-52 (242)
109 PLN02919 haloacid dehalogenase 97.4 0.00013 2.7E-09 72.6 4.1 40 190-233 220-264 (1057)
110 TIGR01497 kdpB K+-transporting 97.4 0.00016 3.5E-09 68.1 4.5 53 188-245 495-548 (675)
111 PRK11033 zntA zinc/cadmium/mer 97.4 0.00019 4.1E-09 68.9 4.5 80 151-246 590-669 (741)
112 TIGR01511 ATPase-IB1_Cu copper 97.3 0.00026 5.5E-09 65.9 4.8 80 151-246 427-507 (562)
113 COG2179 Predicted hydrolase of 97.3 0.00092 2E-08 51.4 6.8 56 4-59 25-82 (175)
114 PF13344 Hydrolase_6: Haloacid 97.3 0.00023 5.1E-09 50.8 3.1 49 10-59 1-53 (101)
115 TIGR01525 ATPase-IB_hvy heavy 97.3 0.00026 5.7E-09 65.8 4.2 82 151-247 407-489 (556)
116 PRK08942 D,D-heptose 1,7-bisph 97.2 0.00054 1.2E-08 54.1 5.0 45 5-49 1-55 (181)
117 TIGR00213 GmhB_yaeD D,D-heptos 97.2 0.00028 6.1E-09 55.5 3.4 42 8-49 2-52 (176)
118 PF08645 PNK3P: Polynucleotide 97.2 0.00032 6.8E-09 54.4 3.4 39 8-46 1-52 (159)
119 TIGR01512 ATPase-IB2_Cd heavy 97.2 0.00035 7.6E-09 64.7 4.1 80 151-245 385-466 (536)
120 PHA02530 pseT polynucleotide k 97.2 0.0012 2.6E-08 56.4 6.8 53 6-58 157-222 (300)
121 PF09419 PGP_phosphatase: Mito 97.1 0.00094 2E-08 52.0 5.2 45 3-47 37-85 (168)
122 TIGR01685 MDP-1 magnesium-depe 97.1 0.0012 2.6E-08 51.9 5.8 52 7-58 2-81 (174)
123 PF06888 Put_Phosphatase: Puta 97.1 0.011 2.5E-07 48.6 11.7 38 181-222 142-187 (234)
124 PTZ00445 p36-lilke protein; Pr 97.1 0.00058 1.3E-08 54.8 4.0 45 4-48 40-100 (219)
125 TIGR01675 plant-AP plant acid 97.1 0.0019 4.2E-08 52.8 6.8 55 5-59 75-159 (229)
126 TIGR01524 ATPase-IIIB_Mg magne 97.1 0.00062 1.3E-08 66.5 4.6 53 188-245 589-642 (867)
127 COG1778 Low specificity phosph 97.1 0.00065 1.4E-08 51.6 3.6 56 4-59 5-71 (170)
128 TIGR01523 ATPase-IID_K-Na pota 97.1 0.00059 1.3E-08 67.8 4.4 54 188-246 732-787 (1053)
129 PF08235 LNS2: LNS2 (Lipin/Ned 97.0 0.0012 2.6E-08 50.7 5.1 43 9-51 1-55 (157)
130 TIGR01657 P-ATPase-V P-type AT 97.0 0.0063 1.4E-07 60.9 11.2 56 183-247 785-841 (1054)
131 PF05152 DUF705: Protein of un 97.0 0.0027 5.8E-08 53.1 7.1 66 5-72 120-192 (297)
132 PRK11009 aphA acid phosphatase 97.0 0.0013 2.9E-08 54.3 5.2 29 200-232 184-212 (237)
133 TIGR01663 PNK-3'Pase polynucle 97.0 0.0022 4.7E-08 59.0 7.0 46 5-50 166-224 (526)
134 TIGR01517 ATPase-IIB_Ca plasma 96.9 0.00085 1.8E-08 66.2 4.3 59 181-246 650-710 (941)
135 PRK06769 hypothetical protein; 96.9 0.00095 2.1E-08 52.5 3.8 44 6-49 3-54 (173)
136 TIGR01106 ATPase-IIC_X-K sodiu 96.9 0.00086 1.9E-08 66.5 4.3 54 188-246 670-725 (997)
137 COG0637 Predicted phosphatase/ 96.9 0.0017 3.8E-08 53.1 5.3 30 28-57 90-120 (221)
138 PRK01122 potassium-transportin 96.9 0.0011 2.4E-08 62.7 4.5 79 152-245 468-547 (679)
139 COG4087 Soluble P-type ATPase 96.9 0.0015 3.2E-08 48.1 4.1 55 188-247 80-138 (152)
140 PRK10517 magnesium-transportin 96.9 0.0011 2.4E-08 64.9 4.3 58 181-245 619-677 (902)
141 PRK15122 magnesium-transportin 96.8 0.0012 2.5E-08 64.8 4.1 59 180-245 618-677 (903)
142 TIGR01261 hisB_Nterm histidino 96.8 0.0016 3.5E-08 50.6 4.1 38 200-241 120-157 (161)
143 TIGR01647 ATPase-IIIA_H plasma 96.8 0.0014 2.9E-08 63.3 4.4 59 180-245 515-574 (755)
144 PRK14010 potassium-transportin 96.8 0.0014 3E-08 62.0 4.0 78 153-245 465-543 (673)
145 TIGR01522 ATPase-IIA2_Ca golgi 96.7 0.002 4.3E-08 63.2 4.7 54 187-245 603-658 (884)
146 TIGR01533 lipo_e_P4 5'-nucleot 96.7 0.0031 6.7E-08 53.0 5.0 47 5-51 73-146 (266)
147 COG0647 NagD Predicted sugar p 96.6 0.003 6.6E-08 53.0 4.5 54 5-59 6-63 (269)
148 COG0474 MgtA Cation transport 96.6 0.0019 4.1E-08 63.5 3.7 60 180-246 619-680 (917)
149 COG2217 ZntA Cation transport 96.5 0.003 6.6E-08 60.0 4.2 79 152-245 560-639 (713)
150 PF03767 Acid_phosphat_B: HAD 96.4 0.0013 2.8E-08 54.2 1.1 47 5-51 70-143 (229)
151 smart00577 CPDc catalytic doma 96.3 0.0067 1.4E-07 46.3 4.8 52 7-58 2-79 (148)
152 PRK10748 flavin mononucleotide 96.3 0.002 4.2E-08 53.3 1.9 41 189-233 164-210 (238)
153 PF03031 NIF: NLI interacting 96.3 0.0043 9.3E-08 47.8 3.6 47 8-54 1-66 (159)
154 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.3 0.0035 7.5E-08 50.2 3.2 43 185-232 151-198 (202)
155 TIGR01686 FkbH FkbH-like domai 96.3 0.013 2.9E-07 50.7 6.9 54 6-59 2-67 (320)
156 TIGR01489 DKMTPPase-SF 2,3-dik 96.1 0.014 3E-07 45.8 5.8 40 185-229 145-186 (188)
157 TIGR01548 HAD-SF-IA-hyp1 haloa 96.1 0.0022 4.8E-08 51.3 1.1 28 9-36 2-29 (197)
158 COG0241 HisB Histidinol phosph 96.1 0.0087 1.9E-07 47.2 4.3 41 7-47 5-55 (181)
159 TIGR01680 Veg_Stor_Prot vegeta 96.0 0.011 2.5E-07 49.4 5.0 46 6-51 100-173 (275)
160 TIGR01456 CECR5 HAD-superfamil 96.0 0.015 3.3E-07 50.3 6.0 47 9-56 2-56 (321)
161 PRK05446 imidazole glycerol-ph 95.9 0.011 2.3E-07 51.8 4.3 43 6-48 1-55 (354)
162 PF12689 Acid_PPase: Acid Phos 95.9 0.014 3E-07 45.6 4.5 50 6-55 2-77 (169)
163 PRK10563 6-phosphogluconate ph 95.8 0.0052 1.1E-07 50.0 2.1 40 188-231 142-186 (221)
164 TIGR02245 HAD_IIID1 HAD-superf 95.8 0.019 4.2E-07 45.9 5.2 51 2-52 16-73 (195)
165 TIGR01993 Pyr-5-nucltdase pyri 95.7 0.0092 2E-07 47.0 3.1 37 190-230 143-184 (184)
166 TIGR01652 ATPase-Plipid phosph 95.7 0.014 3.1E-07 58.4 5.1 54 188-246 754-810 (1057)
167 PF13419 HAD_2: Haloacid dehal 95.7 0.013 2.8E-07 45.0 3.6 33 26-58 79-112 (176)
168 PRK09449 dUMP phosphatase; Pro 95.3 0.015 3.2E-07 47.3 3.0 28 200-231 168-196 (224)
169 KOG0202 Ca2+ transporting ATPa 95.3 0.02 4.3E-07 54.5 4.0 53 188-245 664-718 (972)
170 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.3 0.041 9E-07 43.9 5.5 27 28-54 91-118 (202)
171 TIGR02250 FCP1_euk FCP1-like p 95.1 0.057 1.2E-06 41.7 5.5 53 5-57 4-91 (156)
172 TIGR02251 HIF-SF_euk Dullard-l 95.1 0.064 1.4E-06 41.6 5.8 50 8-57 2-75 (162)
173 TIGR01489 DKMTPPase-SF 2,3-dik 94.9 0.029 6.4E-07 44.0 3.5 16 8-23 2-17 (188)
174 PLN03190 aminophospholipid tra 94.7 0.043 9.4E-07 55.4 4.9 53 188-245 857-912 (1178)
175 PF00702 Hydrolase: haloacid d 94.6 0.027 5.8E-07 45.1 2.7 63 152-224 150-215 (215)
176 KOG0207 Cation transport ATPas 94.5 0.044 9.6E-07 52.6 4.2 60 179-245 765-825 (951)
177 TIGR01493 HAD-SF-IA-v2 Haloaci 94.5 0.013 2.8E-07 45.7 0.5 27 192-222 147-174 (175)
178 PF13242 Hydrolase_like: HAD-h 94.5 0.073 1.6E-06 35.4 4.2 31 200-234 21-52 (75)
179 KOG0210 P-type ATPase [Inorgan 94.1 0.035 7.6E-07 51.9 2.4 40 188-232 767-808 (1051)
180 KOG1615 Phosphoserine phosphat 93.7 0.16 3.4E-06 40.3 5.2 50 189-243 159-213 (227)
181 PF12710 HAD: haloacid dehalog 93.7 0.081 1.8E-06 41.6 3.7 29 189-221 157-192 (192)
182 PF06941 NT5C: 5' nucleotidase 93.6 0.097 2.1E-06 41.6 4.0 13 8-20 2-15 (191)
183 TIGR01494 ATPase_P-type ATPase 93.3 0.081 1.8E-06 48.7 3.5 49 187-245 392-441 (499)
184 TIGR02247 HAD-1A3-hyp Epoxide 93.2 0.047 1E-06 43.9 1.6 40 200-243 169-208 (211)
185 COG1011 Predicted hydrolase (H 92.9 0.087 1.9E-06 42.7 2.8 31 200-234 171-202 (229)
186 COG5083 SMP2 Uncharacterized p 92.7 0.066 1.4E-06 47.4 1.9 72 5-82 373-456 (580)
187 COG4359 Uncharacterized conser 92.7 0.53 1.2E-05 37.1 6.6 15 6-20 2-16 (220)
188 PF00702 Hydrolase: haloacid d 92.4 0.048 1.1E-06 43.6 0.7 30 7-36 1-34 (215)
189 KOG0206 P-type ATPase [General 92.3 0.11 2.4E-06 51.8 3.1 50 180-234 772-823 (1151)
190 COG4996 Predicted phosphatase 91.8 0.67 1.4E-05 34.5 5.8 51 8-58 1-76 (164)
191 PLN02811 hydrolase 91.5 0.27 5.8E-06 39.9 4.1 52 191-246 144-201 (220)
192 KOG1615 Phosphoserine phosphat 91.4 0.15 3.2E-06 40.5 2.3 17 5-21 14-30 (227)
193 COG2216 KdpB High-affinity K+ 91.2 0.2 4.4E-06 45.5 3.2 53 188-245 496-549 (681)
194 COG3700 AphA Acid phosphatase 90.8 0.47 1E-05 37.2 4.5 47 5-51 61-142 (237)
195 TIGR01261 hisB_Nterm histidino 90.7 0.22 4.8E-06 38.6 2.7 41 8-48 2-54 (161)
196 KOG2116 Protein involved in pl 90.6 0.24 5.2E-06 46.1 3.2 45 7-51 530-586 (738)
197 COG4087 Soluble P-type ATPase 90.6 0.37 8E-06 35.8 3.6 49 10-59 17-65 (152)
198 KOG3040 Predicted sugar phosph 90.5 0.44 9.6E-06 38.3 4.2 58 1-59 1-62 (262)
199 KOG3109 Haloacid dehalogenase- 90.0 0.34 7.3E-06 39.2 3.2 32 5-36 13-44 (244)
200 PRK09456 ?-D-glucose-1-phospha 89.2 0.24 5.2E-06 39.5 1.9 48 188-239 141-193 (199)
201 PF12710 HAD: haloacid dehalog 89.2 0.18 3.8E-06 39.6 1.1 13 10-22 1-13 (192)
202 KOG3085 Predicted hydrolase (H 89.0 0.5 1.1E-05 38.9 3.6 48 193-243 177-225 (237)
203 KOG0205 Plasma membrane H+-tra 88.4 0.31 6.6E-06 45.6 2.2 62 180-248 565-627 (942)
204 TIGR02247 HAD-1A3-hyp Epoxide 87.8 0.57 1.2E-05 37.6 3.3 16 7-22 2-17 (211)
205 TIGR01656 Histidinol-ppas hist 87.7 0.46 1E-05 36.0 2.5 40 188-231 101-145 (147)
206 COG3882 FkbH Predicted enzyme 87.6 1.7 3.7E-05 39.4 6.2 56 5-60 220-292 (574)
207 KOG0203 Na+/K+ ATPase, alpha s 87.4 0.42 9.2E-06 45.9 2.5 39 202-245 707-746 (1019)
208 COG4030 Uncharacterized protei 87.4 0.56 1.2E-05 38.3 2.8 53 187-243 189-247 (315)
209 TIGR01662 HAD-SF-IIIA HAD-supe 87.0 0.93 2E-05 33.4 3.8 37 190-230 87-130 (132)
210 TIGR00213 GmhB_yaeD D,D-heptos 87.0 0.32 7E-06 38.0 1.3 41 189-233 107-153 (176)
211 PRK08942 D,D-heptose 1,7-bisph 86.8 0.6 1.3E-05 36.6 2.8 39 191-233 106-149 (181)
212 KOG0209 P-type ATPase [Inorgan 86.5 0.88 1.9E-05 43.8 4.0 49 188-241 793-842 (1160)
213 KOG0204 Calcium transporting A 86.1 0.77 1.7E-05 44.3 3.4 54 187-245 724-779 (1034)
214 PLN02177 glycerol-3-phosphate 85.9 0.6 1.3E-05 42.9 2.7 39 189-232 176-215 (497)
215 PRK05446 imidazole glycerol-ph 85.8 1.1 2.4E-05 39.4 4.1 57 186-246 102-163 (354)
216 PRK06769 hypothetical protein; 85.7 0.58 1.3E-05 36.6 2.2 30 200-233 110-139 (173)
217 KOG2134 Polynucleotide kinase 84.8 0.77 1.7E-05 40.3 2.6 44 5-48 73-129 (422)
218 PRK09456 ?-D-glucose-1-phospha 84.8 1.8 3.9E-05 34.4 4.7 15 8-22 1-15 (199)
219 COG4359 Uncharacterized conser 84.6 0.65 1.4E-05 36.6 1.9 41 184-229 142-183 (220)
220 PF13419 HAD_2: Haloacid dehal 84.3 0.81 1.8E-05 34.8 2.4 39 188-230 133-176 (176)
221 PRK10444 UMP phosphatase; Prov 84.0 2 4.4E-05 35.7 4.8 31 200-234 191-222 (248)
222 TIGR01452 PGP_euk phosphoglyco 83.1 1.7 3.7E-05 36.7 4.1 30 200-233 219-249 (279)
223 TIGR01668 YqeG_hyp_ppase HAD s 82.7 0.72 1.6E-05 35.9 1.5 42 189-234 92-139 (170)
224 COG2503 Predicted secreted aci 82.4 2.2 4.8E-05 35.2 4.2 33 4-36 76-118 (274)
225 PHA02530 pseT polynucleotide k 82.2 1 2.3E-05 38.2 2.4 41 188-232 255-297 (300)
226 TIGR01509 HAD-SF-IA-v3 haloaci 82.1 1.7 3.7E-05 33.6 3.4 36 191-230 143-183 (183)
227 PLN02499 glycerol-3-phosphate 81.8 1.5 3.1E-05 40.1 3.3 30 5-34 6-35 (498)
228 PLN02645 phosphoglycolate phos 80.4 3 6.5E-05 35.9 4.7 30 200-233 247-277 (311)
229 KOG2914 Predicted haloacid-hal 79.6 0.66 1.4E-05 37.9 0.3 51 191-245 158-212 (222)
230 KOG1618 Predicted phosphatase 79.1 2.1 4.6E-05 36.8 3.1 40 6-46 34-78 (389)
231 TIGR01993 Pyr-5-nucltdase pyri 79.0 2.2 4.8E-05 33.3 3.2 27 9-35 2-28 (184)
232 PRK10563 6-phosphogluconate ph 77.1 1.9 4.1E-05 34.8 2.3 18 6-23 3-20 (221)
233 TIGR01691 enolase-ppase 2,3-di 77.1 3.1 6.6E-05 34.0 3.5 40 189-232 153-197 (220)
234 PF11019 DUF2608: Protein of u 77.0 5.1 0.00011 33.4 4.9 17 6-22 19-35 (252)
235 TIGR01544 HAD-SF-IE haloacid d 76.7 2 4.4E-05 36.4 2.4 33 187-223 190-230 (277)
236 PLN02177 glycerol-3-phosphate 76.4 3.2 6.9E-05 38.2 3.8 21 6-26 21-41 (497)
237 KOG3120 Predicted haloacid deh 75.1 2.2 4.7E-05 34.8 2.0 42 178-223 152-202 (256)
238 COG0637 Predicted phosphatase/ 74.2 3.2 7E-05 33.7 3.0 48 184-235 142-190 (221)
239 KOG2882 p-Nitrophenyl phosphat 74.1 4.5 9.7E-05 34.5 3.8 54 6-59 21-77 (306)
240 PRK10748 flavin mononucleotide 73.6 3.8 8.3E-05 33.6 3.3 32 5-36 8-39 (238)
241 PF04312 DUF460: Protein of un 73.4 3.3 7.3E-05 31.0 2.6 52 8-59 44-97 (138)
242 PRK08238 hypothetical protein; 72.7 10 0.00022 34.9 6.0 57 13-75 65-122 (479)
243 KOG3085 Predicted hydrolase (H 72.6 4.8 0.0001 33.2 3.6 21 1-21 1-21 (237)
244 TIGR01458 HAD-SF-IIA-hyp3 HAD- 72.2 4.7 0.0001 33.6 3.5 30 200-233 196-226 (257)
245 PRK09449 dUMP phosphatase; Pro 72.2 3.5 7.5E-05 33.2 2.7 16 6-21 2-17 (224)
246 PRK11009 aphA acid phosphatase 71.7 2.8 6E-05 34.7 2.0 16 6-21 62-77 (237)
247 TIGR01685 MDP-1 magnesium-depe 71.7 2.6 5.5E-05 33.1 1.7 31 200-234 130-160 (174)
248 KOG4549 Magnesium-dependent ph 70.4 12 0.00027 27.7 4.8 52 8-59 19-80 (144)
249 KOG1605 TFIIF-interacting CTD 69.8 3 6.4E-05 35.0 1.8 18 5-22 87-104 (262)
250 TIGR01672 AphA HAD superfamily 69.8 3.5 7.6E-05 34.1 2.2 30 198-231 182-211 (237)
251 TIGR01459 HAD-SF-IIA-hyp4 HAD- 68.9 5.7 0.00012 32.7 3.3 28 200-231 213-241 (242)
252 PLN02770 haloacid dehalogenase 68.5 9.8 0.00021 31.4 4.7 44 29-72 113-158 (248)
253 TIGR01454 AHBA_synth_RP 3-amin 68.1 8.9 0.00019 30.4 4.3 33 26-58 77-110 (205)
254 TIGR01548 HAD-SF-IA-hyp1 haloa 66.8 7.3 0.00016 30.7 3.5 30 189-222 162-196 (197)
255 TIGR01511 ATPase-IB1_Cu copper 66.3 11 0.00023 35.4 4.9 54 6-59 384-441 (562)
256 PRK13288 pyrophosphatase PpaX; 66.2 12 0.00025 29.9 4.6 33 27-59 85-118 (214)
257 TIGR01449 PGP_bact 2-phosphogl 66.1 12 0.00026 29.7 4.7 33 26-58 87-120 (213)
258 KOG3120 Predicted haloacid deh 66.0 3.4 7.4E-05 33.7 1.4 20 4-23 10-29 (256)
259 KOG0208 Cation transport ATPas 65.7 6.4 0.00014 38.9 3.3 53 188-247 839-892 (1140)
260 TIGR03351 PhnX-like phosphonat 65.5 12 0.00027 29.9 4.6 43 29-71 92-138 (220)
261 COG5663 Uncharacterized conser 65.0 3.4 7.3E-05 32.2 1.1 18 7-24 6-23 (194)
262 TIGR01509 HAD-SF-IA-v3 haloaci 64.6 14 0.0003 28.3 4.6 44 27-71 88-133 (183)
263 COG0546 Gph Predicted phosphat 63.8 12 0.00026 30.3 4.3 43 28-70 93-137 (220)
264 PF09047 MEF2_binding: MEF2 bi 63.6 7.2 0.00016 21.1 1.9 20 17-36 1-20 (35)
265 TIGR01460 HAD-SF-IIA Haloacid 61.9 13 0.00028 30.5 4.2 28 200-231 205-234 (236)
266 TIGR02253 CTE7 HAD superfamily 61.7 15 0.00032 29.4 4.4 31 28-58 98-129 (221)
267 TIGR01422 phosphonatase phosph 61.4 17 0.00036 30.0 4.8 29 29-57 104-133 (253)
268 TIGR01549 HAD-SF-IA-v1 haloaci 61.1 15 0.00033 27.4 4.2 31 28-58 68-99 (154)
269 smart00577 CPDc catalytic doma 60.2 4.1 8.9E-05 30.8 0.8 27 194-224 108-135 (148)
270 KOG2961 Predicted hydrolase (H 60.0 19 0.00042 27.7 4.3 35 4-38 40-75 (190)
271 PLN03243 haloacid dehalogenase 57.4 20 0.00043 30.0 4.6 43 29-71 114-158 (260)
272 TIGR01428 HAD_type_II 2-haloal 55.5 22 0.00047 27.9 4.4 32 27-58 95-127 (198)
273 TIGR01456 CECR5 HAD-superfamil 54.5 11 0.00023 32.6 2.6 30 200-233 263-293 (321)
274 PRK13222 phosphoglycolate phos 54.1 32 0.0007 27.4 5.3 36 23-58 92-128 (226)
275 PRK10826 2-deoxyglucose-6-phos 52.8 35 0.00075 27.4 5.2 32 27-58 95-127 (222)
276 TIGR01664 DNA-3'-Pase DNA 3'-p 50.1 16 0.00034 28.3 2.6 21 200-224 127-155 (166)
277 PRK13478 phosphonoacetaldehyde 48.8 37 0.00079 28.2 4.9 31 28-58 105-136 (267)
278 PLN02940 riboflavin kinase 48.7 30 0.00064 30.8 4.5 44 29-72 98-144 (382)
279 PF03437 BtpA: BtpA family; I 48.1 58 0.0012 27.3 5.8 61 31-104 190-252 (254)
280 PRK13223 phosphoglycolate phos 48.1 32 0.00069 28.9 4.4 32 27-58 104-136 (272)
281 PF02670 DXP_reductoisom: 1-de 47.9 15 0.00032 27.4 2.0 42 18-59 3-45 (129)
282 PRK13225 phosphoglycolate phos 47.8 35 0.00076 28.7 4.6 32 27-58 145-177 (273)
283 TIGR02244 HAD-IG-Ncltidse HAD 47.5 42 0.00092 29.4 5.1 31 26-56 186-217 (343)
284 PRK11590 hypothetical protein; 47.1 80 0.0017 25.2 6.5 70 30-104 101-172 (211)
285 TIGR02009 PGMB-YQAB-SF beta-ph 47.0 29 0.00064 26.6 3.8 20 29-48 93-113 (185)
286 TIGR01106 ATPase-IIC_X-K sodiu 46.7 27 0.00058 35.3 4.3 33 24-56 568-601 (997)
287 TIGR01545 YfhB_g-proteo haloac 46.2 99 0.0021 24.8 6.9 73 27-104 97-171 (210)
288 PRK14988 GMP/IMP nucleotidase; 45.7 36 0.00077 27.6 4.2 44 27-70 96-141 (224)
289 PLN02575 haloacid dehalogenase 45.2 34 0.00074 30.5 4.2 43 28-70 220-264 (381)
290 TIGR01686 FkbH FkbH-like domai 44.7 24 0.00053 30.4 3.3 37 188-229 86-127 (320)
291 TIGR01491 HAD-SF-IB-PSPlk HAD- 44.1 37 0.0008 26.4 4.0 31 28-58 84-115 (201)
292 TIGR02254 YjjG/YfnB HAD superf 43.8 43 0.00093 26.6 4.4 43 29-71 102-145 (224)
293 COG1011 Predicted hydrolase (H 43.4 33 0.00071 27.4 3.7 20 5-24 2-21 (229)
294 PRK13226 phosphoglycolate phos 43.4 47 0.001 26.9 4.6 30 29-58 100-130 (229)
295 PF06189 5-nucleotidase: 5'-nu 43.0 45 0.00097 28.0 4.3 45 8-52 122-199 (264)
296 PRK09552 mtnX 2-hydroxy-3-keto 42.7 38 0.00082 27.2 3.9 34 26-59 76-110 (219)
297 PLN02811 hydrolase 42.3 57 0.0012 26.1 5.0 30 24-53 78-108 (220)
298 TIGR01990 bPGM beta-phosphoglu 42.0 53 0.0012 25.1 4.6 23 28-50 91-114 (185)
299 PRK11587 putative phosphatase; 41.9 51 0.0011 26.4 4.6 16 6-21 2-17 (218)
300 TIGR01493 HAD-SF-IA-v2 Haloaci 41.9 20 0.00043 27.4 2.1 15 9-23 1-15 (175)
301 TIGR01525 ATPase-IB_hvy heavy 40.2 48 0.001 31.0 4.7 55 5-59 362-421 (556)
302 KOG2469 IMP-GMP specific 5'-nu 40.1 18 0.00039 32.2 1.7 25 5-29 25-49 (424)
303 PLN02954 phosphoserine phospha 39.4 48 0.001 26.5 4.1 33 26-58 86-119 (224)
304 PRK12348 sgaE L-ribulose-5-pho 39.4 90 0.002 25.5 5.7 53 7-59 53-107 (228)
305 PRK03971 putative deoxyhypusin 38.9 71 0.0015 27.9 5.1 64 22-89 75-142 (334)
306 PLN02588 glycerol-3-phosphate 38.8 20 0.00043 33.1 1.8 19 7-25 50-68 (525)
307 TIGR01512 ATPase-IB2_Cd heavy 37.9 51 0.0011 30.7 4.5 52 8-59 343-399 (536)
308 PF06183 DinI: DinI-like famil 37.5 93 0.002 20.1 4.3 43 154-196 9-52 (65)
309 TIGR02244 HAD-IG-Ncltidse HAD 37.0 19 0.0004 31.6 1.3 19 5-23 10-28 (343)
310 PRK06698 bifunctional 5'-methy 36.5 58 0.0013 29.6 4.5 43 28-70 334-378 (459)
311 PRK06557 L-ribulose-5-phosphat 36.4 69 0.0015 25.9 4.6 52 7-58 60-113 (221)
312 PF12611 DUF3766: Protein of u 35.0 20 0.00043 18.3 0.7 12 8-19 13-24 (24)
313 COG1899 DYS1 Deoxyhypusine syn 34.9 77 0.0017 27.3 4.6 61 23-89 64-131 (318)
314 TIGR00338 serB phosphoserine p 34.5 60 0.0013 25.8 3.9 33 26-58 87-120 (219)
315 TIGR03333 salvage_mtnX 2-hydro 34.1 65 0.0014 25.7 4.0 34 26-59 72-106 (214)
316 PF01994 Trm56: tRNA ribose 2' 33.8 69 0.0015 23.4 3.6 60 179-243 26-88 (120)
317 COG1303 Uncharacterized protei 33.4 2.1E+02 0.0046 22.1 6.3 57 183-244 84-143 (179)
318 TIGR02252 DREG-2 REG-2-like, H 32.9 81 0.0018 24.7 4.4 24 27-50 108-132 (203)
319 PRK06833 L-fuculose phosphate 32.8 91 0.002 25.1 4.7 53 7-59 55-109 (214)
320 TIGR01488 HAD-SF-IB Haloacid D 32.6 73 0.0016 24.1 4.0 32 27-58 76-108 (177)
321 PF09949 DUF2183: Uncharacteri 32.5 1.3E+02 0.0027 21.3 4.8 58 160-221 18-82 (100)
322 KOG2914 Predicted haloacid-hal 32.3 61 0.0013 26.5 3.5 34 5-38 8-41 (222)
323 PRK11033 zntA zinc/cadmium/mer 31.9 82 0.0018 30.8 4.9 54 5-58 546-603 (741)
324 PRK02301 putative deoxyhypusin 31.9 83 0.0018 27.3 4.4 73 13-89 55-134 (316)
325 TIGR00321 dhys deoxyhypusine s 31.7 95 0.0021 26.7 4.7 64 22-89 54-121 (301)
326 COG4502 5'(3')-deoxyribonucleo 31.7 92 0.002 23.7 4.0 49 26-76 70-127 (180)
327 TIGR00259 thylakoid_BtpA membr 31.0 2.5E+02 0.0055 23.5 7.0 80 14-106 172-254 (257)
328 cd05008 SIS_GlmS_GlmD_1 SIS (S 30.9 95 0.0021 22.1 4.1 34 25-58 58-92 (126)
329 cd07018 S49_SppA_67K_type Sign 30.9 94 0.002 25.2 4.5 41 10-50 1-57 (222)
330 COG0434 SgcQ Predicted TIM-bar 30.2 2.2E+02 0.0047 23.8 6.2 81 13-106 177-259 (263)
331 cd06537 CIDE_N_B CIDE_N domain 29.2 51 0.0011 22.3 2.1 34 8-49 40-74 (81)
332 cd06539 CIDE_N_A CIDE_N domain 28.4 55 0.0012 22.0 2.2 33 7-47 40-73 (78)
333 COG4483 Uncharacterized protei 28.4 24 0.00053 22.7 0.5 25 194-222 7-32 (68)
334 PRK04128 1-(5-phosphoribosyl)- 28.0 91 0.002 25.5 3.9 30 200-233 182-213 (228)
335 PLN02779 haloacid dehalogenase 27.7 97 0.0021 26.2 4.2 31 28-58 148-179 (286)
336 PRK10725 fructose-1-P/6-phosph 27.6 1E+02 0.0023 23.6 4.1 16 6-21 4-19 (188)
337 COG0560 SerB Phosphoserine pho 27.5 3.3E+02 0.0071 21.9 8.3 36 24-59 77-116 (212)
338 PF01380 SIS: SIS domain SIS d 27.1 1.2E+02 0.0026 21.5 4.2 34 25-58 65-99 (131)
339 PRK07090 class II aldolase/add 27.0 1.4E+02 0.0031 24.9 5.0 52 7-58 80-133 (260)
340 PRK00805 putative deoxyhypusin 26.7 1.1E+02 0.0023 26.8 4.2 73 13-89 44-123 (329)
341 PF07520 SrfB: Virulence facto 26.3 1.2E+02 0.0027 30.5 5.0 50 27-76 752-805 (1002)
342 cd06536 CIDE_N_ICAD CIDE_N dom 26.3 61 0.0013 21.9 2.1 33 7-47 42-75 (80)
343 KOG3040 Predicted sugar phosph 26.2 59 0.0013 26.5 2.4 37 192-232 189-227 (262)
344 COG0743 Dxr 1-deoxy-D-xylulose 26.0 98 0.0021 27.4 3.9 43 17-59 5-48 (385)
345 smart00266 CAD Domains present 25.9 61 0.0013 21.6 2.0 15 7-21 38-52 (74)
346 TIGR03328 salvage_mtnB methylt 25.7 1.9E+02 0.004 22.9 5.3 49 7-55 45-95 (193)
347 PRK12464 1-deoxy-D-xylulose 5- 25.6 1.2E+02 0.0026 27.1 4.3 52 18-72 1-53 (383)
348 PF11019 DUF2608: Protein of u 25.4 56 0.0012 27.2 2.3 35 183-221 156-195 (252)
349 COG3700 AphA Acid phosphatase 24.9 76 0.0016 25.2 2.7 42 184-232 171-212 (237)
350 TIGR01544 HAD-SF-IE haloacid d 24.8 2.2E+02 0.0048 24.2 5.7 35 24-58 121-156 (277)
351 cd05710 SIS_1 A subgroup of th 24.8 1.4E+02 0.003 21.4 4.1 34 25-58 59-93 (120)
352 cd05013 SIS_RpiR RpiR-like pro 24.3 2.5E+02 0.0054 19.9 5.5 30 26-55 73-103 (139)
353 PRK09220 methylthioribulose-1- 24.3 1.9E+02 0.0042 23.0 5.1 51 8-58 55-107 (204)
354 PRK10597 DNA damage-inducible 24.2 2.4E+02 0.0051 19.1 4.8 46 154-199 21-69 (81)
355 TIGR01691 enolase-ppase 2,3-di 23.9 1.3E+02 0.0029 24.4 4.2 34 24-57 95-129 (220)
356 cd01615 CIDE_N CIDE_N domain, 23.8 70 0.0015 21.5 2.0 31 7-45 40-71 (78)
357 TIGR00734 hisAF_rel hisA/hisF 23.7 3.2E+02 0.0069 22.1 6.4 42 8-56 156-202 (221)
358 PF14258 DUF4350: Domain of un 23.6 1.1E+02 0.0023 19.5 3.0 18 28-45 51-69 (70)
359 PRK14556 pyrH uridylate kinase 23.3 2E+02 0.0044 24.0 5.2 30 30-59 209-239 (249)
360 PRK13145 araD L-ribulose-5-pho 23.0 1.7E+02 0.0037 24.0 4.7 53 7-59 55-109 (234)
361 PF09547 Spore_IV_A: Stage IV 22.9 1.7E+02 0.0038 26.7 4.9 77 10-106 149-234 (492)
362 PRK01221 putative deoxyhypusin 22.9 1.4E+02 0.003 25.9 4.2 63 23-89 64-131 (312)
363 PRK10671 copA copper exporting 22.8 1.4E+02 0.0031 29.5 4.8 53 6-58 629-685 (834)
364 PF13382 Adenine_deam_C: Adeni 22.7 1.7E+02 0.0037 22.9 4.3 56 43-106 68-126 (171)
365 cd05014 SIS_Kpsf KpsF-like pro 22.3 1.1E+02 0.0024 21.9 3.1 34 25-58 59-93 (128)
366 PTZ00445 p36-lilke protein; Pr 22.1 80 0.0017 25.8 2.4 49 183-235 156-209 (219)
367 cd06538 CIDE_N_FSP27 CIDE_N do 21.7 86 0.0019 21.2 2.1 32 8-47 40-72 (79)
368 PRK02492 deoxyhypusine synthas 20.9 1.8E+02 0.0038 25.6 4.5 64 22-89 67-136 (347)
369 COG0279 GmhA Phosphoheptose is 20.9 1.4E+02 0.003 23.4 3.4 18 3-20 70-87 (176)
370 PRK15418 transcriptional regul 20.8 1.2E+02 0.0026 26.2 3.5 59 8-70 244-305 (318)
371 PF12965 DUF3854: Domain of un 20.6 1.2E+02 0.0025 22.6 2.9 40 6-46 69-109 (130)
372 PF11834 DUF3354: Domain of un 20.6 2.6E+02 0.0056 18.3 4.8 38 40-78 19-56 (69)
373 TIGR03127 RuMP_HxlB 6-phospho 20.4 1.3E+02 0.0028 23.1 3.4 34 25-58 84-118 (179)
374 PF01990 ATP-synt_F: ATP synth 20.3 65 0.0014 22.2 1.4 34 203-241 1-34 (95)
375 COG1591 Holliday junction reso 20.2 1.3E+02 0.0029 22.5 3.0 66 29-108 10-79 (137)
376 TIGR01086 fucA L-fuculose phos 20.1 3.7E+02 0.008 21.6 6.0 51 7-58 52-104 (214)
No 1
>PTZ00174 phosphomannomutase; Provisional
Probab=100.00 E-value=3.7e-41 Score=280.33 Aligned_cols=244 Identities=64% Similarity=1.111 Sum_probs=179.5
Q ss_pred cccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcE
Q 038498 4 RKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKL 82 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~ 82 (248)
++++|+|++||||||+++++.++++++++|++++++ +.|++||||++..+.+.++......++++|+.||+.++++++.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~ 81 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGEL 81 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeE
Confidence 357899999999999999999999999999999999 9999999999999988887421123458999999999988888
Q ss_pred EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498 83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL 162 (248)
Q Consensus 83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 162 (248)
++...++..++.+.+.++++.+.++.....+....+.|........++.+............+..+.......+++.+.+
T Consensus 82 i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 161 (247)
T PTZ00174 82 FHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDL 161 (247)
T ss_pred EEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHH
Confidence 98888754467788999998887653222222233444433221222222211111111111211211122334566677
Q ss_pred HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498 163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241 (248)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A 241 (248)
.+.++++.+.++.+++.++||+|+++|||.||++|++ .++++||||+++.+.||++||+.+++.|++|+||+|.+|.+|
T Consensus 162 ~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~ 241 (247)
T PTZ00174 162 KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILK 241 (247)
T ss_pred HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHH
Confidence 7777766666665456899999999999999999998 899999999666668999999988667899999999999999
Q ss_pred hhhccC
Q 038498 242 ALFLAK 247 (248)
Q Consensus 242 ~~v~~~ 247 (248)
+.++++
T Consensus 242 ~~~~~~ 247 (247)
T PTZ00174 242 ELFLKK 247 (247)
T ss_pred HHhcCC
Confidence 999875
No 2
>PLN02423 phosphomannomutase
Probab=100.00 E-value=1.4e-38 Score=264.07 Aligned_cols=243 Identities=90% Similarity=1.425 Sum_probs=190.9
Q ss_pred CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498 1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG 80 (248)
Q Consensus 1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~ 80 (248)
||.|+...+++|||||||+++++.+++++.++|++|++++.|++||||++..+.+.++..+...+.++|+.||+.++.++
T Consensus 1 ~~~~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 1 MAARKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred CCCCccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 78886666777999999999999999999999999995599999999999999888886312223489999999999989
Q ss_pred cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHH
Q 038498 81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVS 160 (248)
Q Consensus 81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (248)
+.++...++..++.+.++++++.++.+.....+...++.|.+++....++..++..+.....+++..+..+.+..++...
T Consensus 81 ~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 160 (245)
T PLN02423 81 KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVS 160 (245)
T ss_pred EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHH
Confidence 99998777656788999999999988654444444556676655544444444434432333233344444444556677
Q ss_pred HHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498 161 VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240 (248)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~ 240 (248)
.+.++++++.+..+.+|..++||+|+++|||.||+.|+.+++++||||+++.+.||++||+..|+.+++|.++.+....+
T Consensus 161 ~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~ 240 (245)
T PLN02423 161 VLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLEDFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQC 240 (245)
T ss_pred HHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhcCcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHH
Confidence 88888887778777667799999999999999999999999999999988888999999998667999999999888776
Q ss_pred hhh
Q 038498 241 KAL 243 (248)
Q Consensus 241 A~~ 243 (248)
...
T Consensus 241 ~~~ 243 (245)
T PLN02423 241 TAL 243 (245)
T ss_pred HHh
Confidence 543
No 3
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=267.39 Aligned_cols=232 Identities=25% Similarity=0.394 Sum_probs=165.1
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI 83 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i 83 (248)
+.+|+|+|||||||+++++.++++++++|++++++ +.|+++|||++..+.+.+... ....++|++||+++++.++.+
T Consensus 1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l--~~~~~~I~~NGa~i~~~~~~i 78 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL--GLDGPLITFNGALIYNGGELL 78 (264)
T ss_pred CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--CCCccEEEeCCeEEecCCcEE
Confidence 36899999999999999999999999999999999 999999999998777666541 112289999999999999999
Q ss_pred EEeecccccchHHHHHHHHHHHHhhccccccc-cccccceeccc-----cceecccCCCC-Chhhhhh--hhhccccccc
Q 038498 84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPI-KRGTFIEFRSG-----MLNISPIGRNC-SQEERDE--FERYDKIHNI 154 (248)
Q Consensus 84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 154 (248)
+..++ +.+.+.++++.+.+......... ..+.+...... .....+..... ....... +..+......
T Consensus 79 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T COG0561 79 FQKPL----SREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEI 154 (264)
T ss_pred eeecC----CHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHh
Confidence 99987 57889999988866422111111 11111111110 00000000000 0000000 0011112234
Q ss_pred hHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 155 RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 155 ~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
.++....+.+.++.....++.+.+..+||+|+++|||.|+++|++ .++++|||| +.||++||+.+| ++||
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD----~~ND~~Ml~~ag-~gva 229 (264)
T COG0561 155 LEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGD----STNDIEMLEVAG-LGVA 229 (264)
T ss_pred HHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCC----ccccHHHHHhcC-eeee
Confidence 556666777777644455555456669999999999999999997 678999999 999999999999 9999
Q ss_pred ccCchhhHHHHhhhhccC
Q 038498 230 VTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 230 v~Na~~~~k~~A~~v~~~ 247 (248)
|+||++++|++|++++.+
T Consensus 230 m~Na~~~~k~~A~~vt~~ 247 (264)
T COG0561 230 MGNADEELKELADYVTTS 247 (264)
T ss_pred ccCCCHHHHhhCCcccCC
Confidence 999999999999988754
No 4
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-39 Score=247.37 Aligned_cols=242 Identities=67% Similarity=1.141 Sum_probs=226.9
Q ss_pred cccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCc
Q 038498 2 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGK 81 (248)
Q Consensus 2 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~ 81 (248)
+.|+...|+.||.||||...+..+++++.+.|++|++.+.+.++-|..++-+.++++..+...+||+..+||..-|.+|+
T Consensus 6 ~~r~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk~gk 85 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYKGGK 85 (252)
T ss_pred hhcCCceEEEEecCCccccccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEeeCCc
Confidence 45566689999999999999999999999999998877999999999999999999887788899999999999999999
Q ss_pred EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHH
Q 038498 82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSV 161 (248)
Q Consensus 82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (248)
.+..+.+-..+..+.++++++++.+|..++.+|.++|.|+++|++|+|++|+++.++++++..|..+|+.+.+++.+++.
T Consensus 86 ~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~v~~ 165 (252)
T KOG3189|consen 86 LLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIREKFVEA 165 (252)
T ss_pred chhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhHHHHHHH
Confidence 99888887778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498 162 LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239 (248)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~ 239 (248)
|+++|+++.+.+|.||..++|++|+||+|..+++++-+ .+.+.+|||++.+++||.++|..-.+.|..|.|+.|.++.
T Consensus 166 Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~dgf~~IhFFGDkT~~GGNDyEIf~dprtiGhsV~~PdDT~~~ 245 (252)
T KOG3189|consen 166 LREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKDGFDTIHFFGDKTMPGGNDYEIFADPRTIGHSVTSPDDTVRI 245 (252)
T ss_pred HHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhcCCceEEEeccccCCCCCcceeeeCCccccccccCchHHHHH
Confidence 99999999999999999999999999999999999997 8899999999999999999999887899999999999887
Q ss_pred Hhhh
Q 038498 240 CKAL 243 (248)
Q Consensus 240 ~A~~ 243 (248)
+...
T Consensus 246 ~~~i 249 (252)
T KOG3189|consen 246 CEEI 249 (252)
T ss_pred HHHH
Confidence 7553
No 5
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=100.00 E-value=3.1e-38 Score=266.20 Aligned_cols=231 Identities=16% Similarity=0.225 Sum_probs=157.7
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe--CCc
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK--DGK 81 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~--~~~ 81 (248)
++|+|++||||||+++++.++++++++|++++++ +.|++||||++..+.+.+... +....+++|+.||+.+++ +++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~ 81 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGE 81 (270)
T ss_pred ceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCC
Confidence 5899999999999999889999999999999999 999999999999876655541 111125899999999996 678
Q ss_pred EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc----eecc-cCCCCC-hhhhhhhhhcccc---
Q 038498 82 LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML----NISP-IGRNCS-QEERDEFERYDKI--- 151 (248)
Q Consensus 82 ~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~-~~~~~~-~~~~~~~~~~~~~--- 151 (248)
.++...++ .+.++++++.++++.....+....+.|..... ... .... ...... .........+.++
T Consensus 82 ~i~~~~l~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 157 (270)
T PRK10513 82 TVAQTALS----YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMI 157 (270)
T ss_pred EEEecCCC----HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEe
Confidence 88888774 78888888887764222111111112221100 000 0000 000000 0000000000110
Q ss_pred c--cchHHHHHHHHHHc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498 152 H--NIRPKMVSVLREKF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE 223 (248)
Q Consensus 152 ~--~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~ 223 (248)
. ...+.+...+.+.+ ..+.+..+ ++.++||+|+++|||.||++|++ ++++++||| +.||++||+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD----~~NDi~Ml~~a 231 (270)
T PRK10513 158 DEPEILDAAIARIPAEVKERYTVLKS--APYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGD----QENDIAMIEYA 231 (270)
T ss_pred CCHHHHHHHHHHhHHHhcCcEEEEEe--cCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECC----chhhHHHHHhC
Confidence 0 11223333444444 23444444 56899999999999999999997 789999999 99999999999
Q ss_pred CCceEEccCchhhHHHHhhhhccC
Q 038498 224 RTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 224 g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
| +|+||+||+|++|++|++|+++
T Consensus 232 g-~~vAm~NA~~~vK~~A~~vt~~ 254 (270)
T PRK10513 232 G-VGVAMGNAIPSVKEVAQFVTKS 254 (270)
T ss_pred C-ceEEecCccHHHHHhcCeeccC
Confidence 9 9999999999999999999853
No 6
>PRK10976 putative hydrolase; Provisional
Probab=100.00 E-value=6.7e-38 Score=263.65 Aligned_cols=227 Identities=16% Similarity=0.224 Sum_probs=156.6
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG 84 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~ 84 (248)
+|+|++||||||+++++.++++++++|++++++ ++|++||||++..+.+.+.. +.. ..++||.||+.+++ +++.++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~-~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEI-KSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCC-CCeEEEcCCcEEECCCCCEeh
Confidence 699999999999999889999999999999999 99999999999987766554 111 24789999999997 778888
Q ss_pred EeecccccchHHHHHHHHHHHHhhc-cccccccccccceecccc-ceecc-c--C-CCCChhh--hhhhhhcccc---cc
Q 038498 85 TQSLKSFLGGEKLKEFINFTLHYIA-DLDIPIKRGTFIEFRSGM-LNISP-I--G-RNCSQEE--RDEFERYDKI---HN 153 (248)
Q Consensus 85 ~~~~~~~i~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-~--~-~~~~~~~--~~~~~~~~~~---~~ 153 (248)
...+ +.+.+.++++.+.+... ...+....+.|....... ..+.. . . ....... ...+..+-.. .+
T Consensus 80 ~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~ 155 (266)
T PRK10976 80 SHNL----DRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHE 155 (266)
T ss_pred hhcC----CHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHH
Confidence 7776 47888989888765311 111111122222110000 00000 0 0 0000000 0000000000 11
Q ss_pred chHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498 154 IRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG 227 (248)
Q Consensus 154 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~ 227 (248)
..+.+.+.+.+.++ ++.+..+ ++.++||+|+++|||.||++|++ ++++++||| +.||++||+.+| +|
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~s--~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD----~~NDi~Ml~~ag-~~ 228 (266)
T PRK10976 156 KLLPLEQAINARWGDRVNVSFS--TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGD----GMNDAEMLSMAG-KG 228 (266)
T ss_pred HHHHHHHHHHHHhCCcEEEEEe--CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcC----CcccHHHHHHcC-CC
Confidence 22334455666554 4555555 56899999999999999999997 789999999 999999999999 99
Q ss_pred EEccCchhhHHHHhh--hhcc
Q 038498 228 HTVTSPEDTMEKCKA--LFLA 246 (248)
Q Consensus 228 ~av~Na~~~~k~~A~--~v~~ 246 (248)
+||+||++++|++|+ +|++
T Consensus 229 vAm~NA~~~vK~~A~~~~v~~ 249 (266)
T PRK10976 229 CIMGNAHQRLKDLLPELEVIG 249 (266)
T ss_pred eeecCCcHHHHHhCCCCeecc
Confidence 999999999999987 6774
No 7
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=100.00 E-value=9.2e-38 Score=263.65 Aligned_cols=227 Identities=22% Similarity=0.285 Sum_probs=157.5
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIG 84 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~ 84 (248)
+|+|++||||||+++++.|+++++++|++|+++ +.|++||||++..+.+.+.. +.. ..++|++||+.+++ +++.++
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~-~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSL-DAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCC-CCcEEecCCcEEEcCCCCEEE
Confidence 699999999999999889999999999999999 99999999999987766654 111 24789999999996 778888
Q ss_pred EeecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccc---eeccc-CCCCChhhh--hhhhhccc--cccch
Q 038498 85 TQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GML---NISPI-GRNCSQEER--DEFERYDK--IHNIR 155 (248)
Q Consensus 85 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~~~--~~~~~~~~--~~~~~ 155 (248)
...+ +.+.++++++.+++......+....+.|..... ... ..... ......... ..+..+-. ..+..
T Consensus 80 ~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~ 155 (272)
T PRK15126 80 RQDL----PADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDL 155 (272)
T ss_pred eecC----CHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHH
Confidence 8877 478899999887765222111111122211100 000 00000 000000000 00000000 01122
Q ss_pred HHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 156 PKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 156 ~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
+++...+.+.++ .+.+..+ +..++||+|+++|||.||++|++ .+++++||| +.||++||+.+| +|+|
T Consensus 156 ~~~~~~l~~~~~~~~~~~~s--~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD----~~NDi~Ml~~ag-~~vA 228 (272)
T PRK15126 156 TRLQIQLNEALGERAHLCFS--ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGD----AMNDREMLGSVG-RGFI 228 (272)
T ss_pred HHHHHHHHHHhcCCEEEEEc--CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecC----CHHHHHHHHHcC-Ccee
Confidence 344455655554 3445444 46799999999999999999997 789999999 999999999999 9999
Q ss_pred ccCchhhHHHHhhh--hcc
Q 038498 230 VTSPEDTMEKCKAL--FLA 246 (248)
Q Consensus 230 v~Na~~~~k~~A~~--v~~ 246 (248)
|+||++++|++|++ |+.
T Consensus 229 m~Na~~~vK~~A~~~~v~~ 247 (272)
T PRK15126 229 MGNAMPQLRAELPHLPVIG 247 (272)
T ss_pred ccCChHHHHHhCCCCeecC
Confidence 99999999999986 653
No 8
>PLN02887 hydrolase family protein
Probab=100.00 E-value=4e-36 Score=273.50 Aligned_cols=231 Identities=16% Similarity=0.180 Sum_probs=158.3
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccC-CC-------ceEEecCCcE
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVID-EY-------DYVFSENGLV 75 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~-~~-------~~~i~~nGa~ 75 (248)
.++|+|+|||||||+++++.|+++++++|++++++ +.|++||||++..+.+.+.. +.. .. .++|+.||+.
T Consensus 306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~~~~~~I~~~~p~I~~NGA~ 384 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLAGKDGIISESSPGVFLQGLL 384 (580)
T ss_pred cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcccccceEeecccEEeecCeE
Confidence 57899999999999999899999999999999999 99999999999877655443 111 11 2577889999
Q ss_pred EEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccce-ecc-cC-CCCC-hhhhhhhh---h
Q 038498 76 AHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN-ISP-IG-RNCS-QEERDEFE---R 147 (248)
Q Consensus 76 i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~-~~~~~~~~---~ 147 (248)
|++ +++.++...+ +.+.+.++++.+.++.....+....+.|......... ... .. .... ......+. .
T Consensus 385 I~d~~g~~I~~~~L----~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 460 (580)
T PLN02887 385 VYGRQGREIYRSNL----DQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAAD 460 (580)
T ss_pred EEECCCcEEEEEeC----CHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccC
Confidence 997 7788888877 4788999998887653221111112222211100000 000 00 0000 00000010 0
Q ss_pred cccc--cc----chHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCC
Q 038498 148 YDKI--HN----IRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGN 215 (248)
Q Consensus 148 ~~~~--~~----~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~N 215 (248)
+.++ .. ..+.+...+.+.+. .+.+..+ ++.++||+|+++|||.||++|++ .++++|||| +.|
T Consensus 461 i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S--~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGD----s~N 534 (580)
T PLN02887 461 IQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQA--QPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGD----GEN 534 (580)
T ss_pred eeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEe--cCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEec----chh
Confidence 0011 00 11223344555553 3445544 56899999999999999999997 779999999 999
Q ss_pred CHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 216 DHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 216 Di~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
|++||+.+| +||||+||++++|++|++|+++
T Consensus 535 DIeMLe~AG-~gVAMgNA~eeVK~~Ad~VT~s 565 (580)
T PLN02887 535 DIEMLQLAS-LGVALSNGAEKTKAVADVIGVS 565 (580)
T ss_pred hHHHHHHCC-CEEEeCCCCHHHHHhCCEEeCC
Confidence 999999999 9999999999999999999853
No 9
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=100.00 E-value=9.5e-36 Score=247.02 Aligned_cols=225 Identities=19% Similarity=0.286 Sum_probs=160.9
Q ss_pred EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEEEee
Q 038498 10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIGTQS 87 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~~~~ 87 (248)
|+|||||||+++++.|+++++++|++|+++ +.++++|||++..+.+.+... ...+++|+.||+.+.. +++.++...
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~--~~~~~~I~~nGa~i~~~~~~~l~~~~ 78 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL--GIDDYFICSNGALIDDPKGKILYEKP 78 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT--THCSEEEEGGGTEEEETTTEEEEEES
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccc--cchhhhcccccceeeecccccchhhh
Confidence 799999999999999999999999999999 999999999999877766641 1125999999999944 889999998
Q ss_pred cccccchHHHHHHHHHHHHhhccccccccccccceeccc-c-c---eecccCC-CCChhhhh---hhhh--ccccccchH
Q 038498 88 LKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG-M-L---NISPIGR-NCSQEERD---EFER--YDKIHNIRP 156 (248)
Q Consensus 88 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---~~~~~~~-~~~~~~~~---~~~~--~~~~~~~~~ 156 (248)
+ +.+.++.+++.+..+.....+......|...... . . ....... ........ .+.. +....+..+
T Consensus 79 i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~ 154 (254)
T PF08282_consen 79 I----DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLE 154 (254)
T ss_dssp B-----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHH
T ss_pred e----eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhh
Confidence 7 4789999999999875222221112222211100 0 0 0000000 00000000 0000 111122345
Q ss_pred HHHHHHHHHcCCc-eEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 157 KMVSVLREKFAHL-NLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 157 ~~~~~l~~~~~~~-~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
.+.+.+.+.+++. .+..+ +..++||+|+++||+.|+++|++ ++++++||| +.||++||+.+| +++||
T Consensus 155 ~l~~~l~~~~~~~~~~~~~--~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD----~~ND~~Ml~~~~-~~~am 227 (254)
T PF08282_consen 155 QLREELKKKFPNLIDVVRS--SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGD----SENDIEMLELAG-YSVAM 227 (254)
T ss_dssp HHHHHHHHHHTTTEEEEEE--ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEES----SGGGHHHHHHSS-EEEEE
T ss_pred hhhhhhccccCcceeEEEe--cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeec----ccccHhHHhhcC-eEEEE
Confidence 5667788888753 34444 57899999999999999999997 789999999 999999999999 99999
Q ss_pred cCchhhHHHHhhhhccC
Q 038498 231 TSPEDTMEKCKALFLAK 247 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~~~ 247 (248)
+||++++|++|++|+..
T Consensus 228 ~na~~~~k~~a~~i~~~ 244 (254)
T PF08282_consen 228 GNATPELKKAADYITPS 244 (254)
T ss_dssp TTS-HHHHHHSSEEESS
T ss_pred cCCCHHHHHhCCEEecC
Confidence 99999999999999853
No 10
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=100.00 E-value=5.7e-35 Score=246.36 Aligned_cols=228 Identities=18% Similarity=0.237 Sum_probs=156.1
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe--CCcE
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK--DGKL 82 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~--~~~~ 82 (248)
++|+|+|||||||+++++.++++++++|++++++ +.|++||||++..+.+.+.. +... .++|+.||+.+++ +++.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~-~~~I~~NGa~i~d~~~~~~ 79 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALD-TPAICCNGTYLYDYQAKKV 79 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCC-CCEEEcCCcEEEecCCCEE
Confidence 5799999999999999889999999999999999 99999999999887666554 1111 3799999999997 5688
Q ss_pred EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccc----cc----eec----ccCCCCC-hhh--h--hhh
Q 038498 83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSG----ML----NIS----PIGRNCS-QEE--R--DEF 145 (248)
Q Consensus 83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~----~~~~~~~-~~~--~--~~~ 145 (248)
++...+ +.+.+.++++.+++......+....+.|...... .. ... +...... ... . ...
T Consensus 80 l~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
T PRK10530 80 LEADPL----PVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAI 155 (272)
T ss_pred EEecCC----CHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCc
Confidence 888876 5789999999887752211111111111110000 00 000 0000000 000 0 000
Q ss_pred hhccccc---cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCH
Q 038498 146 ERYDKIH---NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDH 217 (248)
Q Consensus 146 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi 217 (248)
..+-... ...+.+.+.+.+.+. +.+..+ ...++|++|++++|+.|++++++ ++++++||| +.||+
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s--~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD----~~NDi 228 (272)
T PRK10530 156 WKFALTHEDLPQLQHFAKHVEHELG-LECEWS--WHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGD----NFNDI 228 (272)
T ss_pred EEEEEecCCHHHHHHHHHHHhhhcC-ceEEEe--cCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCC----ChhhH
Confidence 0000000 112334445555543 334444 34689999999999999999997 779999999 99999
Q ss_pred HHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 218 EIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 218 ~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
+|++.+| +++||+||.+++|+.|++|+++
T Consensus 229 ~m~~~ag-~~vamgna~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 229 SMLEAAG-LGVAMGNADDAVKARADLVIGD 257 (272)
T ss_pred HHHHhcC-ceEEecCchHHHHHhCCEEEec
Confidence 9999999 9999999999999999999854
No 11
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=100.00 E-value=8.5e-35 Score=230.51 Aligned_cols=216 Identities=69% Similarity=1.169 Sum_probs=182.9
Q ss_pred HHHHHHHHhhcCeEEEEcCCChHHHHHHhc-ccccCCCceEEecCCcEEEeCCcEEEEeecccccchHHHHHHHHHHHHh
Q 038498 29 MLEFMRELRKVVTVGVVGGSDLSKISEQLG-KTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHY 107 (248)
Q Consensus 29 ~~~al~~l~~~~~v~iaTGR~~~~~~~~l~-~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~~~~ 107 (248)
+.+.|++|++.+.|++++|-.++.+.+|+. ..+...+||+.++||...|..++.+..+.+.+.++.+..+++++++++|
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~~ 80 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLRY 80 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHHH
Confidence 467889998889999999999999999994 5455678999999999999999999888887778899999999999999
Q ss_pred hccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCC
Q 038498 108 IADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQG 187 (248)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~ 187 (248)
..++.+|.++|.++|+|+++++++|+++.++++++..+..+|+...+++.+++.|+++||++.+.++.||..++||+|+|
T Consensus 81 ~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~G 160 (220)
T PF03332_consen 81 ISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPKG 160 (220)
T ss_dssp HHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEETT
T ss_pred HHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccCC
Confidence 99999999999999999999999999999999999888888988889999999999999998899999999999999999
Q ss_pred CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhh
Q 038498 188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244 (248)
Q Consensus 188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v 244 (248)
++|..+|++|.+ .+++++||||+++++||.+++...++.+++|.+++|.++.+...+
T Consensus 161 wDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 161 WDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQLKELF 219 (220)
T ss_dssp -SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHHHHHh
Confidence 999999999998 799999999999999999999988878999999999998876543
No 12
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=6e-34 Score=234.55 Aligned_cols=206 Identities=19% Similarity=0.240 Sum_probs=144.5
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC--CcE
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD--GKL 82 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~--~~~ 82 (248)
.+|+|++||||||+++++.+++++.++|++|+++ +.|++||||++..+.+.+.. + ...+++|+.||+.+++. ++.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-I-GTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred ceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-h-CCCCcEEEecCeEEEEcCCCCE
Confidence 5799999999999999889999999999999999 99999999999876654433 1 11248999999999973 677
Q ss_pred EEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHH
Q 038498 83 IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVL 162 (248)
Q Consensus 83 i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 162 (248)
++...+ +.+.++++.+.++...... .+...... .... ... .. .....+.+.+.+
T Consensus 80 ~~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-------~~~~------~~~-~~-~~~~~~~~~~~l 133 (230)
T PRK01158 80 IFLGDI------EECEKAYSELKKRFPEAST-----SLTKLDPD-------YRKT------EVA-LR-RTVPVEEVRELL 133 (230)
T ss_pred EEEcch------HHHHHHHHHHHHhccccce-----eeecCCcc-------cccc------eee-ec-ccccHHHHHHHH
Confidence 777765 2455566666553211100 01000000 0000 000 00 001122333333
Q ss_pred HHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhH
Q 038498 163 REKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTM 237 (248)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~ 237 (248)
++++. .+....+ ..++|+.|+++||+.|++++++ ++++++||| +.||++||+.+| +++||+||++++
T Consensus 134 -~~~~~-~~~~~~~-~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD----~~NDi~m~~~ag-~~vam~Na~~~v 205 (230)
T PRK01158 134 -EELGL-DLEIVDS-GFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGD----SENDLEMFEVAG-FGVAVANADEEL 205 (230)
T ss_pred -HHcCC-cEEEEec-ceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECC----chhhHHHHHhcC-ceEEecCccHHH
Confidence 33331 2333332 3579999999999999999997 678999999 999999999999 999999999999
Q ss_pred HHHhhhhccC
Q 038498 238 EKCKALFLAK 247 (248)
Q Consensus 238 k~~A~~v~~~ 247 (248)
|++|++|+++
T Consensus 206 k~~a~~v~~~ 215 (230)
T PRK01158 206 KEAADYVTEK 215 (230)
T ss_pred HHhcceEecC
Confidence 9999999864
No 13
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=100.00 E-value=1.1e-33 Score=236.84 Aligned_cols=226 Identities=18% Similarity=0.270 Sum_probs=155.9
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-CcEEEEe
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-GKLIGTQ 86 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~~~i~~~ 86 (248)
+|+|||||||+++++.+++++.++|++|+++ +.++++|||++..+.+.+.. +.. ..++|+.||+.+++. ++.++..
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~-~~~~I~~NGa~i~~~~~~~i~~~ 78 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGL-DTPFITANGAAVIDDQGEILYKK 78 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCC-CCCEEEcCCcEEECCCCCEEeec
Confidence 5899999999999889999999999999999 99999999999887776665 111 128999999999984 6888888
Q ss_pred ecccccchHHHHHHHHHHHHhhccccccccccccceecc-ccce-ecc-cCCC---CCh--hhh-hhhhhc--cccccch
Q 038498 87 SLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS-GMLN-ISP-IGRN---CSQ--EER-DEFERY--DKIHNIR 155 (248)
Q Consensus 87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~---~~~--~~~-~~~~~~--~~~~~~~ 155 (248)
++ +.+.++++++.+.+......+....+.|..... .... ... .... ... ... ..+..+ .......
T Consensus 79 ~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T TIGR00099 79 PL----DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDL 154 (256)
T ss_pred CC----CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHH
Confidence 77 478999999988875322211112222221110 0000 000 0000 000 000 000000 0000112
Q ss_pred HHHHHHHHH-Hc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceE
Q 038498 156 PKMVSVLRE-KF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGH 228 (248)
Q Consensus 156 ~~~~~~l~~-~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~ 228 (248)
+++...+.+ .+ +.+.+..+ +..++||+|+++||+.|++++++ ++++++||| +.||++||+.+| .++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~s--~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD----~~nD~~m~~~~~-~~~ 227 (256)
T TIGR00099 155 DLLIEALNKLELEENVSVVSS--GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGD----GMNDIEMLEAAG-YGV 227 (256)
T ss_pred HHHHHHhhhhhhcCCEEEEEe--cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCC----cHHhHHHHHhCC-cee
Confidence 233334442 23 23444444 56899999999999999999997 679999999 999999999999 999
Q ss_pred EccCchhhHHHHhhhhccC
Q 038498 229 TVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 229 av~Na~~~~k~~A~~v~~~ 247 (248)
||+||++++|+.|++|+.+
T Consensus 228 a~~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 228 AMGNADEELKALADYVTDS 246 (256)
T ss_pred EecCchHHHHHhCCEEecC
Confidence 9999999999999999864
No 14
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=100.00 E-value=5.4e-33 Score=234.42 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=147.2
Q ss_pred cccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498 2 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG 80 (248)
Q Consensus 2 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~ 80 (248)
-.-+.+++|++||||||+++++.++++++++|++|+++ +.|++||||++..+.+.+.. +.....++|++||+.+++.+
T Consensus 2 ~~~~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 2 LSLQDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCcCCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCCCCcEEEeCCCEEEecC
Confidence 34467899999999999998888999999999999999 99999999999887766554 11111379999999999742
Q ss_pred --c-----EEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhh--cccc
Q 038498 81 --K-----LIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFER--YDKI 151 (248)
Q Consensus 81 --~-----~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 151 (248)
+ .++...+ +.+.+..+++.+.+.. ...+....+................... ......... +...
T Consensus 81 ~~~~~~~~~~~~~~l----~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 154 (271)
T PRK03669 81 QWQDHPDFPRIISGI----SHGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAAL-ARLHEASVTLIWRDS 154 (271)
T ss_pred cccCCCCceEeecCC----CHHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHH-HhccccCceeEecCC
Confidence 2 2444444 6889999999887641 1111110000000000000000000000 000000000 0000
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESE 223 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~ 223 (248)
.....++.+.+.. .++.+.. + ..++|++|+++|||.|+++|++ .++++|||| +.||++||+.+
T Consensus 155 ~~~~~~~~~~l~~--~~~~~~~--~-~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGD----s~NDi~Ml~~a 225 (271)
T PRK03669 155 DERMAQFTARLAE--LGLQFVQ--G-ARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGD----GPNDAPLLDVM 225 (271)
T ss_pred HHHHHHHHHHHHH--CCCEEEe--c-CeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcC----CHHHHHHHHhC
Confidence 1112233334433 2444433 2 3689999999999999999997 368999999 99999999999
Q ss_pred CCceEEccCch-hh-----HHHHhhhhccCC
Q 038498 224 RTVGHTVTSPE-DT-----MEKCKALFLAKP 248 (248)
Q Consensus 224 g~~~~av~Na~-~~-----~k~~A~~v~~~~ 248 (248)
| +||||+|+. +. ++..|++++..|
T Consensus 226 g-~gvAM~~~~~~~~~l~~~~~~~~~~~~~~ 255 (271)
T PRK03669 226 D-YAVVVKGLNREGVHLQDDDPARVYRTQRE 255 (271)
T ss_pred C-EEEEecCCCCCCcccccccCCceEeccCC
Confidence 9 999999877 32 556788888654
No 15
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=100.00 E-value=1.6e-31 Score=219.32 Aligned_cols=199 Identities=21% Similarity=0.254 Sum_probs=136.0
Q ss_pred EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC--cEEEEe
Q 038498 10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG--KLIGTQ 86 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~--~~i~~~ 86 (248)
|+|||||||+++++.+++++.++|++|+++ +.+++||||++..+.+.+.. + ...+++|+.||+.+++.+ +.++..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l-~~~~~~i~~nGa~i~~~~~~~~~~~~ 78 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-I-GTPDPVIAENGGEISYNEGMDDIFLA 78 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-h-CCCCeEEEecCcEEEeCCCCceEEec
Confidence 689999999999888999999999999999 99999999999876655543 1 224689999999999843 455555
Q ss_pred ecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHHc
Q 038498 87 SLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKF 166 (248)
Q Consensus 87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 166 (248)
.++ .......+...... .. .... .. + ... ...... ..... +....+.+.+
T Consensus 79 ~~~----~~~~~~~~~~~~~~-----~~----~~~~------~~-~--~~~------~~~~~~-~~~~~-~~~~~~~~~~ 128 (225)
T TIGR01482 79 YLE----EEWFLDIVIAKTFP-----FS----RLKV------QY-P--RRA------SLVKMR-YGIDV-DTVREIIKEL 128 (225)
T ss_pred ccC----HHHHHHHHHhcccc-----hh----hhcc------cc-c--ccc------ceEEEe-ecCCH-HHHHHHHHhc
Confidence 543 33222221111000 00 0000 00 0 000 000000 00111 2223444554
Q ss_pred CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498 167 AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241 (248)
Q Consensus 167 ~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A 241 (248)
.. .+.... +..++|++|++++|+.|++++++ ++++++||| +.||++||+.+| +++||+||.+++|++|
T Consensus 129 ~~-~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD----~~NDi~m~~~ag-~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 129 GL-NLVAVD-SGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD----SENDIDLFEVPG-FGVAVANAQPELKEWA 201 (225)
T ss_pred Cc-eEEEec-CCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC----CHhhHHHHHhcC-ceEEcCChhHHHHHhc
Confidence 42 232222 35699999999999999999997 678999999 999999999999 9999999999999999
Q ss_pred hhhccC
Q 038498 242 ALFLAK 247 (248)
Q Consensus 242 ~~v~~~ 247 (248)
++|+..
T Consensus 202 ~~vt~~ 207 (225)
T TIGR01482 202 DYVTES 207 (225)
T ss_pred CeecCC
Confidence 999864
No 16
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.97 E-value=6.6e-31 Score=214.50 Aligned_cols=199 Identities=20% Similarity=0.269 Sum_probs=133.5
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT 85 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~ 85 (248)
+|+|++||||||+++++.+++++.++|++|+++ +.|+++|||++..+.+.+.. + ....++|++||+.+++.++.+..
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l-~~~~~~i~~NGa~i~~~~~~~~~ 78 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-I-GTSGPVVAENGGVIFYNKEDIFL 78 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-h-CCCCcEEEccCcEEEeCCCcEEE
Confidence 589999999999999889999999999999999 99999999999887665543 1 11238999999999984443332
Q ss_pred eecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHHH
Q 038498 86 QSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREK 165 (248)
Q Consensus 86 ~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 165 (248)
.... ...+ ....... ..+. ..+.. .+ + .. ... +.......+.+...+. .
T Consensus 79 ~~~~----~~~~---~~~~~~~----~~~~--~~~~~------~~-~--~~-------~~~-~~~~~~~~~~~~~~l~-~ 127 (215)
T TIGR01487 79 ANME----EEWF---LDEEKKK----RFPR--DRLSN------EY-P--RA-------SLV-IMREGKDVDEVREIIK-E 127 (215)
T ss_pred eccc----chhh---HHHhhhh----hhhh--hhccc------cc-c--ee-------EEE-EecCCccHHHHHHHHH-h
Confidence 2211 1111 1100000 0000 00000 00 0 00 000 0000111223333333 2
Q ss_pred cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHH
Q 038498 166 FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKC 240 (248)
Q Consensus 166 ~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~ 240 (248)
.++.+ ..+ ...+|++|.+++|+.|++++++ .+++++||| +.||++||+.+| +++||+||.|++|++
T Consensus 128 -~~~~~--~~~-~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGD----s~ND~~ml~~ag-~~vam~na~~~~k~~ 198 (215)
T TIGR01487 128 -RGLNL--VDS-GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGD----SENDIDLFRVVG-FKVAVANADDQLKEI 198 (215)
T ss_pred -CCeEE--Eec-CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC----CHHHHHHHHhCC-CeEEcCCccHHHHHh
Confidence 23333 322 4689999999999999999997 568999999 999999999999 999999999999999
Q ss_pred hhhhccC
Q 038498 241 KALFLAK 247 (248)
Q Consensus 241 A~~v~~~ 247 (248)
|++|++.
T Consensus 199 A~~v~~~ 205 (215)
T TIGR01487 199 ADYVTSN 205 (215)
T ss_pred CCEEcCC
Confidence 9999853
No 17
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.97 E-value=6.1e-30 Score=216.04 Aligned_cols=220 Identities=16% Similarity=0.206 Sum_probs=144.2
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-C--
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-G-- 80 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~-- 80 (248)
..+|+|++||||||+++++.+++.++++|++|+++ +.++++|||++..+...+... ....++|+.||+.+++. +
T Consensus 2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l--~l~~~~i~~nGa~i~~~~~~~ 79 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL--GLEDPFIVENGAAIYIPKNYF 79 (273)
T ss_pred CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--CCCCCEEEEcCcEEEeccccc
Confidence 35899999999999998788999999999999999 999999999998766655541 11248999999999972 2
Q ss_pred ------------cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhh-hhhhh
Q 038498 81 ------------KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEER-DEFER 147 (248)
Q Consensus 81 ------------~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 147 (248)
+.++...+ +.+.+.++++.+.+... ..+..... +... ....+............ ..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PRK00192 80 PFQPDGERLKGDYWVIELGP----PYEELREILDEISDELG-YPLKGFGD-LSAE--EVAELTGLSGESARLAKDREFSE 151 (273)
T ss_pred ccCCccccccCCceEEEcCC----CHHHHHHHHHHHHHHhC-CCeeehhh-CCHH--HHHHHhCcCHHHHHHHHhcccCC
Confidence 35666655 57888888887655311 11110000 0000 00000000000000000 00000
Q ss_pred -c--cccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----c-CCEEEEcCCCCCCCCCHH
Q 038498 148 -Y--DKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----F-NEIHFFGDKTYKGGNDHE 218 (248)
Q Consensus 148 -~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~-~~~~aiGD~~~~~~NDi~ 218 (248)
+ .......+.+...+ +.+ ++.+.. +..++||+|.+ +||.|++++++ + +++++||| +.||++
T Consensus 152 ~~~~~~~~~~~~~~~~~l-~~~-~~~~~~---~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GD----s~NDi~ 221 (273)
T PRK00192 152 PFLWNGSEAAKERFEEAL-KRL-GLKVTR---GGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGD----SPNDLP 221 (273)
T ss_pred ceeecCchHHHHHHHHHH-HHc-CCEEEE---CCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcC----ChhhHH
Confidence 0 00011122232333 222 333432 25799999999 99999999996 7 99999999 999999
Q ss_pred HHhhCCCceEEccCchhhHH----HHh-hhhc
Q 038498 219 IFESERTVGHTVTSPEDTME----KCK-ALFL 245 (248)
Q Consensus 219 M~~~~g~~~~av~Na~~~~k----~~A-~~v~ 245 (248)
||+.+| +++||+||++++| ++| +.|+
T Consensus 222 m~~~ag-~~vam~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 222 MLEAAD-IAVVVPGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred HHHhCC-eeEEeCCCCCCCcccCccccCCceE
Confidence 999999 9999999999999 777 6766
No 18
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.97 E-value=1.4e-29 Score=211.88 Aligned_cols=219 Identities=17% Similarity=0.159 Sum_probs=138.9
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC-C-cE---
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD-G-KL--- 82 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~-~-~~--- 82 (248)
+|++||||||+++++.+.+.++++|++|+++ +.++++|||++..+.+.+.. + ...+++|++||+.+++. + ..
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~-~~~~~~I~~NGa~i~~~~~~~~~~~ 78 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-L-GLEDPFIVENGGAIYGPRGWFTEPE 78 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-c-CCCCcEEEcCCeEEEeCCCcccCCC
Confidence 5899999999998774555799999999999 99999999999877665554 1 11258999999999983 3 22
Q ss_pred --EEEeecccccchHHHHHHHHHHHHhhcccccccccc-ccceeccccceecccCCCCChhhhhhhhhcccc-ccchHHH
Q 038498 83 --IGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRG-TFIEFRSGMLNISPIGRNCSQEERDEFERYDKI-HNIRPKM 158 (248)
Q Consensus 83 --i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (248)
++...+ +.+.+.++++.+.... +..+....+ .+.+. ......... .........+...-.. .+..+.+
T Consensus 79 ~~~~~~~i----~~~~~~~il~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR01486 79 YPVIALGI----PYEKIRARLEELSEEL-GFKFRGLGDLTDAEI-AELTGLSRE--LAALAQRREYSETILWSEERRERF 150 (256)
T ss_pred eEEEEcCC----CHHHHHHHHHHHHHHh-CCCccchhhCCHHHH-HHHhCcCHH--HHHHHhhCccCCceecChHHHHHH
Confidence 455555 5788888888654421 111111000 00000 000000000 0000000000000000 1112222
Q ss_pred HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
...+. . .++.+..+ ..++|++|++++|+.|+++|++ .+++++||| +.||++||+.+| +++||+
T Consensus 151 ~~~~~-~-~~~~~~~s---~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD----~~ND~~Ml~~ag-~~vam~ 220 (256)
T TIGR01486 151 TEALV-E-LGLEVTHG---NRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGD----SPNDLPLLEVVD-LAVVVP 220 (256)
T ss_pred HHHHH-H-cCCEEEeC---CceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcC----CHhhHHHHHHCC-EEEEeC
Confidence 23332 2 23444433 3589999999999999999986 457999999 999999999999 999999
Q ss_pred Cch---hhHHHH--h-hhhccC
Q 038498 232 SPE---DTMEKC--K-ALFLAK 247 (248)
Q Consensus 232 Na~---~~~k~~--A-~~v~~~ 247 (248)
||+ +++|++ | ++|+.+
T Consensus 221 Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 221 GPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred CCCCCccccCccCCCcEEEcCC
Confidence 998 589998 5 488854
No 19
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.96 E-value=3.6e-29 Score=208.67 Aligned_cols=198 Identities=20% Similarity=0.253 Sum_probs=128.3
Q ss_pred eEEEEecCCCCCC---CCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498 8 LLALFDVDGTLTA---PRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI 83 (248)
Q Consensus 8 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i 83 (248)
.+|++||||||++ .+..+++++.+.+++++++ +.|+++|||++.++.+.+...-...++++|+.||+.|++++...
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~ 81 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEV 81 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCc
Confidence 5899999999997 5667899999999999999 99999999999887766443112345679999999999865321
Q ss_pred EEeecccccchHHHHHHHHHH---------HHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccc--cc
Q 038498 84 GTQSLKSFLGGEKLKEFINFT---------LHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDK--IH 152 (248)
Q Consensus 84 ~~~~~~~~i~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 152 (248)
. ...+...+... ........ ..... ......+... .+. ..
T Consensus 82 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~--~~~~~k~~~~--------------~~~~~~~ 132 (249)
T TIGR01485 82 P---------DQHWAEYLSEKWQRDIVVAITDKFEELK----PQPDL--EQRPHKVSFF--------------LDPEAAP 132 (249)
T ss_pred C---------CHHHHHHHhcccCHHHHHHHHhcCcccc----cCCcc--ccCCeeEEEE--------------echhhhh
Confidence 1 12222221111 11000000 00000 0000000000 000 00
Q ss_pred cchHHHHHHHHHHcC-CceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh-CCC
Q 038498 153 NIRPKMVSVLREKFA-HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES-ERT 225 (248)
Q Consensus 153 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~-~g~ 225 (248)
.....+...+.+ ++ .+.+..+ +..++|++|++++|+.|+++|++ ++++++||| +.||++||+. ++
T Consensus 133 ~~~~~l~~~l~~-~~~~~~~~~~--~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD----~~ND~~ml~~~~~- 204 (249)
T TIGR01485 133 EVIKQLTEMLKE-TGLDVKLIYS--SGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGD----SGNDIELFEIGSV- 204 (249)
T ss_pred HHHHHHHHHHHh-cCCCEEEEEE--CCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEEC----ChhHHHHHHccCC-
Confidence 011222222333 22 2334444 56899999999999999999997 789999999 9999999998 66
Q ss_pred ceEEccCchhhHHHHhh
Q 038498 226 VGHTVTSPEDTMEKCKA 242 (248)
Q Consensus 226 ~~~av~Na~~~~k~~A~ 242 (248)
.+++|+||.+++|+.++
T Consensus 205 ~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 205 RGVIVSNAQEELLQWYD 221 (249)
T ss_pred cEEEECCCHHHHHHHHH
Confidence 99999999999998764
No 20
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.96 E-value=3.4e-29 Score=207.19 Aligned_cols=208 Identities=23% Similarity=0.306 Sum_probs=130.0
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEee
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQS 87 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~ 87 (248)
+|++||||||+++++.+++.+ ++++ ++++ +.++++|||++.++.+.+...-...++++|+.||+.++..........
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~ 78 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRF 78 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChh
Confidence 589999999999887788776 7776 6777 999999999999988887652112356799999999876332111111
Q ss_pred cccccchHHHHHHHHHHHHhhccccccccccccceecc--ccceecccCCCCChhhhhhhhhccc-cccchHHHHHHHHH
Q 038498 88 LKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRS--GMLNISPIGRNCSQEERDEFERYDK-IHNIRPKMVSVLRE 164 (248)
Q Consensus 88 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 164 (248)
+...+...+. ...+.+.... ++ +...+... ....+... ... .....+++...+.+
T Consensus 79 ~~~~~~~~~~---~~~~~~~~~~--~~---~~~~~~~~~~~~~~i~~~--------------~~~~~~~~~~~~~~~l~~ 136 (236)
T TIGR02471 79 WQKHIDHDWR---RQAVVEALAD--IP---GLTLQDDQEQGPFKISYL--------------LDPEGEPILPQIRQRLRQ 136 (236)
T ss_pred HHHHHhcCCC---HHHHHHHHhc--CC---CcEeCChhcCCCeeEEEE--------------ECcccchHHHHHHHHHHh
Confidence 0000000000 0001111000 00 00000000 00000000 000 00112334444444
Q ss_pred HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498 165 KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239 (248)
Q Consensus 165 ~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~ 239 (248)
....+.+..+ +..++|++|+++||+.|+++|++ ++++++||| +.||++||+.+| ++++|+||.+++|+
T Consensus 137 ~~~~~~~~~~--~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD----~~nD~~ml~~~~-~~iav~na~~~~k~ 209 (236)
T TIGR02471 137 QSQAAKVILS--CGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGD----SGNDEEMLRGLT-LGVVVGNHDPELEG 209 (236)
T ss_pred ccCCEEEEEE--CCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcC----CccHHHHHcCCC-cEEEEcCCcHHHHH
Confidence 3223334444 45789999999999999999997 668999999 999999999999 99999999999999
Q ss_pred Hhh----hhccC
Q 038498 240 CKA----LFLAK 247 (248)
Q Consensus 240 ~A~----~v~~~ 247 (248)
.|+ +|+..
T Consensus 210 ~a~~~~~~v~~~ 221 (236)
T TIGR02471 210 LRHQQRIYFANN 221 (236)
T ss_pred hhcCCcEEEcCC
Confidence 999 77754
No 21
>PLN02382 probable sucrose-phosphatase
Probab=99.96 E-value=4.5e-28 Score=214.46 Aligned_cols=212 Identities=17% Similarity=0.212 Sum_probs=129.3
Q ss_pred ccceEEEEecCCCCCCC--CCCCCHHHHHHH-HHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498 5 KQGLLALFDVDGTLTAP--RKAATPQMLEFM-RELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG 80 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~--~~~i~~~~~~al-~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~ 80 (248)
...-+|++||||||+++ ++.++....++| +++.++ +.++++|||++..+.+.+...-...++++|+.||+.|++.+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~ 86 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGE 86 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCC
Confidence 34578999999999987 447887777777 888888 99999999996655443322112346789999999999755
Q ss_pred cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccC-CCCChhhhhhhhhccccccchHHHH
Q 038498 81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIG-RNCSQEERDEFERYDKIHNIRPKMV 159 (248)
Q Consensus 81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (248)
.... ...+...++..... ..+ .+. ...+.... .....+....+..+.. ......+.
T Consensus 87 ~~~~---------d~~w~~~l~~~w~~---~~v-------~~~---~~~~~~l~~q~~~~~~~~Ki~~~~~-~~~~~~~~ 143 (413)
T PLN02382 87 SMVP---------DHGWVEYLNKKWDR---EIV-------VEE---TSKFPELKLQPETEQRPHKVSFYVD-KKKAQEVI 143 (413)
T ss_pred CCcc---------ChhHHHHHhccCCh---hhH-------HHH---HhcCCCcccCCcccCCCeEEEEEec-hHHhHHHH
Confidence 3332 22333333211110 000 000 00000000 0000000000000000 00112233
Q ss_pred HHHHHHcC----CceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhCCCce
Q 038498 160 SVLREKFA----HLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESERTVG 227 (248)
Q Consensus 160 ~~l~~~~~----~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~g~~~ 227 (248)
..+.+.+. .+.+..+ +..++||+|+++|||.||++|++ ++++++||| +.||++||+.+|+++
T Consensus 144 ~~l~~~~~~~g~~~~i~~s--~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGD----s~NDleMl~~ag~~g 217 (413)
T PLN02382 144 KELSERLEKRGLDVKIIYS--GGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGD----SGNDAELFSVPDVYG 217 (413)
T ss_pred HHHHHHHHhcCCcEEEEEE--CCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeC----CHHHHHHHhcCCCCE
Confidence 44444442 2334445 56799999999999999999986 568999999 999999999997459
Q ss_pred EEccCchhhHHHHhhhhc
Q 038498 228 HTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 228 ~av~Na~~~~k~~A~~v~ 245 (248)
|+|+||.+++|+.|.+++
T Consensus 218 vam~NA~~elk~~a~~~~ 235 (413)
T PLN02382 218 VMVSNAQEELLQWYAENA 235 (413)
T ss_pred EEEcCCcHHHHHHHHhhc
Confidence 999999999998764443
No 22
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.96 E-value=3.4e-27 Score=198.16 Aligned_cols=195 Identities=15% Similarity=0.181 Sum_probs=139.8
Q ss_pred ceEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-
Q 038498 7 GLLALFDVDGTLTAP-----RKAATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK- 78 (248)
Q Consensus 7 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~- 78 (248)
..+|++|+||||++. ...++++++++|++|.+ . +.|+++|||++..+.+.++.. .+ +++++||+.+++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~---~~-~~i~~nGa~i~~~ 89 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY---RF-PLAGVHGAERRDI 89 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc---cc-eEEEeCCCeeecC
Confidence 479999999999984 56799999999999998 6 999999999999988877641 22 689999999987
Q ss_pred CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHH
Q 038498 79 DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKM 158 (248)
Q Consensus 79 ~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (248)
++.. ....+ +.+.++.+++.++++..+ ..+.+++.+...+. ..++.++. ..+....+
T Consensus 90 ~~~~-~~~~l----~~~~~~~i~~~l~~~~~~-----~pg~~ve~k~~~~~--~h~r~~~~-----------~~~~~~~l 146 (266)
T PRK10187 90 NGKT-HIVHL----PDAIARDISVQLHTALAQ-----LPGAELEAKGMAFA--LHYRQAPQ-----------HEDALLAL 146 (266)
T ss_pred CCCe-eeccC----ChhHHHHHHHHHHHHhcc-----CCCcEEEeCCcEEE--EECCCCCc-----------cHHHHHHH
Confidence 4443 33434 467777777777665222 12445543322111 11121110 01112244
Q ss_pred HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC----CCceEE
Q 038498 159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE----RTVGHT 229 (248)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~----g~~~~a 229 (248)
...+.+.++. +.+.. |..++|+.|+++|||.||+++++ .+++++||| +.||++||+.+ | .+|+
T Consensus 147 ~~~i~~~~~~--~~~~~-g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD----~~nD~~mf~~~~~~~g-~~va 218 (266)
T PRK10187 147 AQRITQIWPQ--LALQP-GKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGD----DLTDEAGFAVVNRLGG-ISVK 218 (266)
T ss_pred HHHHHhhCCc--eEEeC-CCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcC----CccHHHHHHHHHhcCC-eEEE
Confidence 4556666654 32332 68999999999999999999997 568999999 99999999998 8 9999
Q ss_pred ccCchhh
Q 038498 230 VTSPEDT 236 (248)
Q Consensus 230 v~Na~~~ 236 (248)
|+|+.+.
T Consensus 219 vg~a~~~ 225 (266)
T PRK10187 219 VGTGATQ 225 (266)
T ss_pred ECCCCCc
Confidence 9999754
No 23
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.95 E-value=4.3e-27 Score=192.69 Aligned_cols=205 Identities=13% Similarity=0.090 Sum_probs=126.8
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CC-cEE--
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DG-KLI-- 83 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~-~~i-- 83 (248)
+|++||||||+++++.+++.++++|++|+++ +.|+++|||++..+.+.+.. +.....++||+||+.+++ .. +.+
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~~~~~I~~NGa~i~~~~~~~~~~~ 79 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLTGDPYIAENGAAIHLEELWREEPG 79 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCcEEEeCCcEEEcCcccccCCC
Confidence 5899999999998776777799999999999 99999999999876665554 111114899999999997 33 322
Q ss_pred ---EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhh-hc-c-ccccchHH
Q 038498 84 ---GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFE-RY-D-KIHNIRPK 157 (248)
Q Consensus 84 ---~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~ 157 (248)
.... ++.+.+.++++.+.+.. ...+....+.+.........+... ........... .+ . ...+..+.
T Consensus 80 ~~~~~~~----~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (221)
T TIGR02463 80 YPRIILG----ISYGIIRLVLETLSEEL-HFKFTPFDDLSDAEIAELTGLSGS--QAALAQDREASVPLLWRDSDSRMPR 152 (221)
T ss_pred ceEEecC----CCHHHHHHHHHHHHHHh-CCCceehhhCCHHHHHHHhCcCHH--HHHHHHhccCCccEEecCchhHHHH
Confidence 2333 35788888888765531 111111111000000000000000 00000000000 00 0 00112222
Q ss_pred HHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 158 MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
+.+.+ .+. ++.+.. +..++||+|++++|+.|++++++ ++++++||| +.||++||+.+| ++|||.
T Consensus 153 ~~~~l-~~~-~~~~~~---~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD----~~NDi~ml~~ag-~~va~~ 221 (221)
T TIGR02463 153 FTALL-ADL-GLAIVQ---GNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGD----GPNDLPLLEVAD-YAVVIK 221 (221)
T ss_pred HHHHH-HHc-CCeEEe---cCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECC----CHHHHHHHHhCC-ceEEeC
Confidence 33333 222 344433 25689999999999999999997 889999999 999999999999 999973
No 24
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.94 E-value=1.1e-25 Score=205.07 Aligned_cols=214 Identities=18% Similarity=0.279 Sum_probs=139.3
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-C---
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-D--- 79 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~--- 79 (248)
++.|+|++||||||+++++.++++++++|++++++ +.|++||||++..+...+.. + ...+++|++||+.++. +
T Consensus 414 ~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-L-gl~~~~I~eNGA~I~~~~~~~ 491 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-L-GIKDPFITENGGAIFIPKDYF 491 (694)
T ss_pred ceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-c-CCCCeEEEcCCCEEEECCCcc
Confidence 56899999999999998888888999999999999 99999999999876554443 1 1125899999999997 3
Q ss_pred -----------CcEEEEeecccccchHHHHHHHHHHHHhhc-ccccc-ccccccceecccc-c-eecccCCCCChhhhhh
Q 038498 80 -----------GKLIGTQSLKSFLGGEKLKEFINFTLHYIA-DLDIP-IKRGTFIEFRSGM-L-NISPIGRNCSQEERDE 144 (248)
Q Consensus 80 -----------~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~-~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ 144 (248)
+..++...+ +.+.+.++++.+.+... ...+. ...+.|+...... . ..... ..........
T Consensus 492 ~~~~~~~~~~~~~iI~~~~l----~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~-TgL~~~~a~~ 566 (694)
T PRK14502 492 RLPFAYDRVAGNYLVIELGM----AYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL-TDLNLKQAEL 566 (694)
T ss_pred cccccccccCCCeEEEEcCC----CHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh-hCCCHHHHHH
Confidence 235666655 68899999998877311 10000 0111122111100 0 00000 0111000000
Q ss_pred hh---hcccc-----ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEE--cCC
Q 038498 145 FE---RYDKI-----HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFF--GDK 209 (248)
Q Consensus 145 ~~---~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~ai--GD~ 209 (248)
.. ...++ .+..+++.+.+.+. + +.+.. ++.+++++ +++|||.|+++|++ .+++++| ||
T Consensus 567 a~~Re~seKIl~~gd~e~Leel~~~L~~~--~--l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eViafalGD- 639 (694)
T PRK14502 567 AKQREYSETVHIEGDKRSTNIVLNHIQQS--G--LEYSF-GGRFYEVT-GGNDKGKAIKILNELFRLNFGNIHTFGLGD- 639 (694)
T ss_pred HhhccCceeEEEcCCHHHHHHHHHHHHHc--C--cEEEE-CCEEEEeC-CCCCHHHHHHHHHHHhCCCccceEEEEcCC-
Confidence 00 01111 11223333344433 3 44444 57899999 59999999999997 5688888 99
Q ss_pred CCCCCCCHHHHhhCCCceEEccCchhh
Q 038498 210 TYKGGNDHEIFESERTVGHTVTSPEDT 236 (248)
Q Consensus 210 ~~~~~NDi~M~~~~g~~~~av~Na~~~ 236 (248)
+.||++||+.+| ++|||++....
T Consensus 640 ---s~NDisMLe~Ag-~gVAM~~~~~~ 662 (694)
T PRK14502 640 ---SENDYSMLETVD-SPILVQRPGNK 662 (694)
T ss_pred ---cHhhHHHHHhCC-ceEEEcCCCCC
Confidence 999999999999 99999997663
No 25
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.94 E-value=2.1e-25 Score=180.49 Aligned_cols=192 Identities=30% Similarity=0.424 Sum_probs=124.9
Q ss_pred EEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEe
Q 038498 9 LALFDVDGTLTAPR-KAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQ 86 (248)
Q Consensus 9 li~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~ 86 (248)
+|++|+||||++++ ..++++++++|++|+++ +.++++|||++..+.+.+.. + ..++|++||+.++..++.++..
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~---~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ-L---PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh-C---CCCEEECCCcEEEECCEEEEEc
Confidence 58999999999987 67999999999999999 99999999999988877765 2 2589999999999876666554
Q ss_pred ecccccchHHHHHHHHHHHHhhcccccc--ccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHH
Q 038498 87 SLKSFLGGEKLKEFINFTLHYIADLDIP--IKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLRE 164 (248)
Q Consensus 87 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 164 (248)
+ .+.++.+++............ ...+.+.+.+.....+.. .... ........+...+..
T Consensus 77 --~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~-----------~~~~~~~~~~~~~~~ 137 (204)
T TIGR01484 77 --P----SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHY--VGAE-----------LGQELDSKMRERLEK 137 (204)
T ss_pred --c----cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEE--eccc-----------hhhHHHHHHHHHHHh
Confidence 1 233444444332210000000 000111111111011100 0000 000001112222222
Q ss_pred H---cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 165 K---FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 165 ~---~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
. .+.+.+.++ +..++|++|++++|+.+++.+++ ++++++||| +.||++||+.+| .++||
T Consensus 138 ~~~~~~~~~~~~s--~~~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD----~~nD~~~~~~~~-~~vam 204 (204)
T TIGR01484 138 IGRNDLELEAIYV--GKTDLEVLPAGVDKGSALQALLKELNGKRDEILAFGD----SGNDEEMFEVAG-LAVAV 204 (204)
T ss_pred hccccCcEEEEEe--cCCEEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcC----CHHHHHHHHHcC-CceEC
Confidence 1 234445444 57899999999999999999997 678999999 999999999999 99997
No 26
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.94 E-value=1.5e-26 Score=192.29 Aligned_cols=204 Identities=20% Similarity=0.235 Sum_probs=114.3
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT 85 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~ 85 (248)
.+++++||||||++.+.....+..+.++...+. +.++++|||++.++.+.+...-...+|++||++|+.||+..+....
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d 81 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPD 81 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcCh
Confidence 589999999999922222223333333323344 9999999999998877766532245789999999999994455444
Q ss_pred eecccccchHHH-HHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHHH
Q 038498 86 QSLKSFLGGEKL-KEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLRE 164 (248)
Q Consensus 86 ~~~~~~i~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 164 (248)
..|...+...+- +.+.+.+.+. .. +.. ..+.......++.+.. .+......+.+.+.+.+
T Consensus 82 ~~w~~~i~~~w~~~~v~~~l~~~-~~--l~~----q~~~~q~~~k~sy~~~------------~~~~~~~~~~i~~~l~~ 142 (247)
T PF05116_consen 82 EEWQAHIDERWDRERVEEILAEL-PG--LRP----QPESEQRPFKISYYVD------------PDDSADILEEIRARLRQ 142 (247)
T ss_dssp HHHHHHHHTT--HHHHHHHHHCH-CC--EEE----GGCCCGCCTCECEEEE------------TTSHCHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCChHHHHHHHHHh-hC--ccc----CCccccCCeeEEEEEe------------cccchhHHHHHHHHHHH
Confidence 444322222111 1111111111 00 000 0000000001111100 00011112333333332
Q ss_pred HcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhh
Q 038498 165 KFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDT 236 (248)
Q Consensus 165 ~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~ 236 (248)
.++.+.+...+...+||+|++++|+.|+++|++ +++++++|| |+||++||..+. ++|+|+||.++
T Consensus 143 --~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGD----SgND~~mL~~~~-~~vvV~Na~~e 212 (247)
T PF05116_consen 143 --RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGD----SGNDLEMLEGGD-HGVVVGNAQPE 212 (247)
T ss_dssp --CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEES----SGGGHHHHCCSS-EEEE-TTS-HH
T ss_pred --cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeC----CCCcHHHHcCcC-CEEEEcCCCHH
Confidence 234443332256789999999999999999997 679999999 999999998886 99999999999
No 27
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.93 E-value=5.2e-25 Score=180.60 Aligned_cols=199 Identities=18% Similarity=0.133 Sum_probs=124.1
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-C-------
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-D------- 79 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~------- 79 (248)
+|+|||||||+++ ..++++++++|++|+++ +.++++|||++..+.+.+... ...+++|++||+.|++ .
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l--g~~~~~I~~NGa~I~~~~~~~~~~~ 77 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL--GVEPPFIVENGGAIFIPRGYFPFPV 77 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc--CCCCcEEEcCCcEEEecCccccccc
Confidence 5899999999995 45677899999999999 999999999998766554431 1124799999999997 2
Q ss_pred -------CcEEEEeecccccchHHHHHHHHHHHH-hhccccccccccccceeccccceecccCCCCChhhhhhhhhc--c
Q 038498 80 -------GKLIGTQSLKSFLGGEKLKEFINFTLH-YIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERY--D 149 (248)
Q Consensus 80 -------~~~i~~~~~~~~i~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 149 (248)
++.++...+ +.+.+.++++.+.+ +. +....+.+.........+.... ........+... -
T Consensus 78 ~~~~~~~~~~i~~~~l----~~~~~~~il~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ki~~~ 147 (225)
T TIGR02461 78 GAGREVGNYEVIELGK----PVAKIRAALKEAENEYG----LKYYGNSTAEEVEKLTGLPREL--APLAKRREYSETIFL 147 (225)
T ss_pred cccccCCCeEEEEcCC----CHHHHHHHHHHHHHhcC----ccchhcCCHHHHHHHHCcCHHH--HHHHHhhhcCCcccC
Confidence 445777776 47889999988877 22 1110000000000000000000 000000001000 0
Q ss_pred ccccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-------cCCEEEEcCCCCCCCCCHHHHhh
Q 038498 150 KIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-------FNEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-------~~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
...+...++.+.+. . .++.+..+ ++ +++ +++++||+.|++.+++ ..++++||| +.||++||+.
T Consensus 148 ~~~e~~~~~~~~~~-~-~~~~~~~s--~~-~~~-i~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD----~~nD~~ml~~ 217 (225)
T TIGR02461 148 WSREGWEAILVTAR-A-RGLKYTHG--GR-FYT-VHGGSDKGKAIKRLLDLYKLRPGAIESVGLGD----SENDFPMFEV 217 (225)
T ss_pred CCHHHHHHHHHHHH-H-cCCcEEEC--CE-EEE-ECCCCCHHHHHHHHHHHhccccCcccEEEEcC----CHHHHHHHHh
Confidence 00111223333342 2 23334433 33 455 4669999999999986 347999999 9999999999
Q ss_pred CCCceEEcc
Q 038498 223 ERTVGHTVT 231 (248)
Q Consensus 223 ~g~~~~av~ 231 (248)
+| ++|+|+
T Consensus 218 ag-~~v~v~ 225 (225)
T TIGR02461 218 VD-LAFLVG 225 (225)
T ss_pred CC-CcEecC
Confidence 99 999986
No 28
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.91 E-value=3.3e-23 Score=196.10 Aligned_cols=209 Identities=19% Similarity=0.266 Sum_probs=136.6
Q ss_pred ccceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEE
Q 038498 5 KQGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAH 77 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~ 77 (248)
.+.++|+||+||||++.. ..++++++++|++|.+ . +.|+++|||++..+.+.++. + +. ++|++||+.++
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~-~--~l-~liaenG~~i~ 565 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD-L--PI-HLVAEHGAWSR 565 (726)
T ss_pred ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCC-C--Ce-EEEEeCCEEEe
Confidence 467999999999999742 3578999999999999 5 99999999999999888875 1 23 79999999998
Q ss_pred eCCcEEEEeeccc-ccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchH
Q 038498 78 KDGKLIGTQSLKS-FLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP 156 (248)
Q Consensus 78 ~~~~~i~~~~~~~-~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (248)
..++.+....... .+ .+.+..+++.+... ..+.+.+...... ....+....+ +. ....+
T Consensus 566 ~~~~~w~~~~~~~~~w-~~~v~~il~~~~~~--------~~gs~ie~k~~~l--~~~~r~~d~~----~~-----~~~a~ 625 (726)
T PRK14501 566 APGGEWQLLEPVATEW-KDAVRPILEEFVDR--------TPGSFIEEKEASL--AWHYRNADPE----LG-----EARAN 625 (726)
T ss_pred CCCCceEECCCcchhH-HHHHHHHHHHHHhc--------CCCcEEEEcceEE--EEEccCCCHH----HH-----HHHHH
Confidence 7443322221110 00 22233333322221 2355555432211 1111111110 00 00112
Q ss_pred HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhC---CCceEEc
Q 038498 157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESE---RTVGHTV 230 (248)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~---g~~~~av 230 (248)
++...+...+.+..+.... |..++||.|+++|||.|++.+++ .+.+++||| +.||++||+.+ | .+++|
T Consensus 626 ~l~~~l~~~~~~~~~~v~~-g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD----~~nDe~Mf~~~~~~~-~~v~v 699 (726)
T PRK14501 626 ELILALSSLLSNAPLEVLR-GNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGD----DTTDEDMFRALPETA-ITVKV 699 (726)
T ss_pred HHHHHHHHHhcCCCeEEEE-CCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECC----CCChHHHHHhcccCc-eEEEE
Confidence 3334444433333344443 57999999999999999999997 789999999 99999999985 6 89999
Q ss_pred cCchhhHHHHhhhhccC
Q 038498 231 TSPEDTMEKCKALFLAK 247 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~~~ 247 (248)
+|++ ..|++++++
T Consensus 700 G~~~----s~A~~~l~~ 712 (726)
T PRK14501 700 GPGE----SRARYRLPS 712 (726)
T ss_pred CCCC----CcceEeCCC
Confidence 9963 566666654
No 29
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.90 E-value=1.2e-22 Score=168.74 Aligned_cols=212 Identities=17% Similarity=0.139 Sum_probs=135.6
Q ss_pred cceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498 6 QGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~ 78 (248)
+.++++||+||||++.. ..+++++.++|++|.+. +.|+|+|||++.++...+.. ..+ +++++||+.++.
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~---~~~-~l~g~hG~~~~~ 77 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL---PGL-GLAGEHGCEMKD 77 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCC---Cce-eEEeecCEEEec
Confidence 45899999999999742 34789999999999888 77899999998777665542 122 689999999886
Q ss_pred CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHH
Q 038498 79 DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKM 158 (248)
Q Consensus 79 ~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (248)
++.......++. . ...+++....+.++... ..|.++|.+... +...++.++..+. .....
T Consensus 78 ~g~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~-----~pG~~iE~K~~s--~~~hyr~a~d~~~-----------~~~~~ 137 (244)
T TIGR00685 78 NGSCQDWVNLTE-K-IPSWKVRANELREEITT-----RPGVFIERKGVA--LAWHYRQAPVPEL-----------ARFRA 137 (244)
T ss_pred CCCcceeeechh-h-hhhHHHHHHHHHHHHhc-----CCCcEEEecceE--EEEEeccCCCcHH-----------HHHHH
Confidence 554422222211 0 12445555555554332 146666654322 2222232211000 00011
Q ss_pred HHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC-------CCc
Q 038498 159 VSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE-------RTV 226 (248)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~-------g~~ 226 (248)
.+.+.+..+...+.+.. +...+|+.|.++|||.+++.+++ .+++++||| +.||++||+.+ |..
T Consensus 138 ~~~~~~~~~~~~~~v~~-g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD----~~~D~~~~~~~~~~~~~~g~~ 212 (244)
T TIGR00685 138 KELKEKILSFTDLEVMD-GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGD----DITDEDAFRVVNNQWGNYGFY 212 (244)
T ss_pred HHHHHHHhcCCCEEEEE-CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcC----CCcHHHHHHHHhcccCCCCeE
Confidence 11111111212244443 67899999999999999999997 568999999 99999999988 337
Q ss_pred eEEccCchhhHHHHhhhhccCC
Q 038498 227 GHTVTSPEDTMEKCKALFLAKP 248 (248)
Q Consensus 227 ~~av~Na~~~~k~~A~~v~~~~ 248 (248)
+++|+. ...+..|++++++|
T Consensus 213 ~v~v~~--g~~~~~A~~~~~~~ 232 (244)
T TIGR00685 213 PVPIGS--GSKKTVAKFHLTGP 232 (244)
T ss_pred EEEEec--CCcCCCceEeCCCH
Confidence 888863 34566677776654
No 30
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.89 E-value=3e-22 Score=166.45 Aligned_cols=212 Identities=9% Similarity=0.036 Sum_probs=124.3
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGT 85 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~ 85 (248)
+|+||+||||||++++..+++.+.++|++|+++ +.|+++|||++.++...... +.. -+++|++||+.|+........
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl-~~p~I~eNGA~I~~p~~~~~~ 78 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRL-EHPFICEDGSAIYVPEHYFPA 78 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCC-CCeEEEeCCcEEEEccccccc
Confidence 489999999999998888999999999999999 99999999999876554443 111 248999999999974322100
Q ss_pred ----------ee---cccccchHHHHHHHHHHHHhhcccccccc-ccccceec-cccceecccCCCCChhhhhhhhhccc
Q 038498 86 ----------QS---LKSFLGGEKLKEFINFTLHYIADLDIPIK-RGTFIEFR-SGMLNISPIGRNCSQEERDEFERYDK 150 (248)
Q Consensus 86 ----------~~---~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (248)
.. ..--.+...+..+++.+.+.. ...++ .+.+...+ .....++.. ....-...+|...-.
T Consensus 79 ~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~---~~~f~gF~d~t~~ei~~~TGL~~~--~A~~A~~Re~SEp~~ 153 (302)
T PRK12702 79 GILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDS---HLDLIGFGDWTASELAAATGIPLE--EAERAQKREYSEIFS 153 (302)
T ss_pred cccccccccCCCceEEecCCCHHHHHHHHHHHHHHh---CCCceehhhCCHHHHHHHhCcCHH--HHHHHHhccCCcceE
Confidence 00 000123666777777666631 11110 00010000 000001000 000000001110000
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEee---------------------CCCCHHHHHHHhhc---cC----C
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP---------------------QGWDKTYCLRYLDD---FN----E 202 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~---------------------~~~~K~~al~~l~~---~~----~ 202 (248)
.....+...+.+.+. + +....||. ++-++. .+++||.|++.|.+ .. .
T Consensus 154 w~~~~~~~~~~~~~~--g--~~~~~GgR-f~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~ 228 (302)
T PRK12702 154 YSGDPARLREAFAQQ--E--ANLTQHLL-RLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIK 228 (302)
T ss_pred ecCCHHHHHHHHHHc--C--CeEEecCc-eEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCce
Confidence 011111222222222 2 33444333 444443 49999999999997 33 6
Q ss_pred EEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498 203 IHFFGDKTYKGGNDHEIFESERTVGHTVTSPED 235 (248)
Q Consensus 203 ~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~ 235 (248)
++++|| |.||++||+++. ++|.|.+..-
T Consensus 229 tiaLGD----spND~~mLe~~D-~~vvi~~~~~ 256 (302)
T PRK12702 229 ALGIGC----SPPDLAFLRWSE-QKVVLPSPIA 256 (302)
T ss_pred EEEecC----ChhhHHHHHhCC-eeEEecCCCC
Confidence 999999 999999999999 9999977544
No 31
>PLN02580 trehalose-phosphatase
Probab=99.87 E-value=1.5e-20 Score=163.08 Aligned_cols=210 Identities=19% Similarity=0.303 Sum_probs=133.5
Q ss_pred cccceEEEEecCCCCCCC-----CCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498 4 RKQGLLALFDVDGTLTAP-----RKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~ 78 (248)
+.+..++|+|+||||.+- ...++++++++|++|.+...++|+|||+...+.+.++. ..+ ++++++|..+..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~---~~l-~laGsHG~e~~~ 191 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL---TEL-YYAGSHGMDIMG 191 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC---CCc-cEEEeCCceeec
Confidence 346789999999999843 23579999999999998877999999999999998885 223 788999999764
Q ss_pred -CCcEEE----------------EeecccccchH---HHHHHHHHHHHhhccccccccccccceeccccceecccCCCCC
Q 038498 79 -DGKLIG----------------TQSLKSFLGGE---KLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCS 138 (248)
Q Consensus 79 -~~~~i~----------------~~~~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (248)
.+.... ...+. ...+ .+.++.+.+.+.... ..|.++|.... .+..+++..+
T Consensus 192 p~~~~~~~~~~~~~~~~~~~g~~~~~~~--~a~~~~~~i~~v~~~l~e~~~~-----~pGs~VE~K~~--svavHYR~a~ 262 (384)
T PLN02580 192 PVRESVSNDHPNCIKSTDQQGKEVNLFQ--PASEFLPMIDEVFRSLVESTKD-----IKGAKVENHKF--CVSVHYRNVD 262 (384)
T ss_pred CCCCcccccccccccccccccccccccc--cchhhhhhHHHHHHHHHHHhcc-----CCCCEEEecCc--EEEEEeCCCC
Confidence 221100 00000 0011 223444444433111 24666664332 2233334332
Q ss_pred hhhhhhhhhccccccchHHHHHHHHHHcCCceEEEEecCceEEEEee-CCCCHHHHHHHhhc-c-----CC--EEEEcCC
Q 038498 139 QEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP-QGWDKTYCLRYLDD-F-----NE--IHFFGDK 209 (248)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~-~~~~K~~al~~l~~-~-----~~--~~aiGD~ 209 (248)
.... . ........+...++++ .+.. |...+|+.| .++|||.|+++|++ . +. .++|||
T Consensus 263 ~~~~---------~-~~~~~l~~~l~~~~~l--~v~~-Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD- 328 (384)
T PLN02580 263 EKNW---------P-LVAQCVHDVLKKYPRL--RLTH-GRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD- 328 (384)
T ss_pred chHH---------H-HHHHHHHHHHHhCCce--EEEe-CCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC-
Confidence 2110 0 1112222333455654 3333 578999999 59999999999997 1 23 389999
Q ss_pred CCCCCCCHHHHhh-----CCCceEEccCchhhHHHHhhhhcc
Q 038498 210 TYKGGNDHEIFES-----ERTVGHTVTSPEDTMEKCKALFLA 246 (248)
Q Consensus 210 ~~~~~NDi~M~~~-----~g~~~~av~Na~~~~k~~A~~v~~ 246 (248)
+.||.+||+. +| .+|+|+|+.++. .|+|-++
T Consensus 329 ---D~TDedmF~~L~~~~~G-~~I~Vgn~~~~t--~A~y~L~ 364 (384)
T PLN02580 329 ---DRTDEDAFKVLREGNRG-YGILVSSVPKES--NAFYSLR 364 (384)
T ss_pred ---CchHHHHHHhhhccCCc-eEEEEecCCCCc--cceEEcC
Confidence 9999999996 57 999999987655 3455443
No 32
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.85 E-value=3.6e-20 Score=176.15 Aligned_cols=195 Identities=17% Similarity=0.225 Sum_probs=126.8
Q ss_pred cccceEEEEecCCCCCCCCC---CCCHHHHHHHHHHhh-c-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498 4 RKQGLLALFDVDGTLTAPRK---AATPQMLEFMRELRK-V-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~~---~i~~~~~~al~~l~~-~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~ 78 (248)
+.+.++|++|+||||++... .++++++++|++|.+ . +.|+|+|||++.++.+.++.. ..+ +++++||+.+..
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~--~~l-~laaEHG~~ir~ 669 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC--EKL-GIAAEHGYFLRL 669 (854)
T ss_pred hhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC--CCe-EEEEeCCEEEEe
Confidence 35689999999999997753 678999999999854 4 999999999999999999861 122 789999999887
Q ss_pred CCcEEEEeecccccchHHHHHHHHHH-HHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHH
Q 038498 79 DGKLIGTQSLKSFLGGEKLKEFINFT-LHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPK 157 (248)
Q Consensus 79 ~~~~i~~~~~~~~i~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (248)
.++..+....+ .....+++.+..+ +.|... ..|.|++..... +.+.++.... ++... ..++
T Consensus 670 ~~~~~w~~~~~--~~~~~w~~~v~~i~~~y~er-----tpGs~IE~K~~s--lv~HyR~adp----d~~~~-----qa~e 731 (854)
T PLN02205 670 KRDVEWETCVP--VADCSWKQIAEPVMQLYTET-----TDGSTIEDKETA--LVWCYEDADP----DFGSC-----QAKE 731 (854)
T ss_pred CCCceeeecch--hhhHHHHHHHHHHHHHHhcC-----CCchhheecceE--EEEehhhCCh----HHhhh-----hhHH
Confidence 54432222211 1122344433333 333111 356777644321 1222222211 11000 1123
Q ss_pred HHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498 158 MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFESER 224 (248)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~~g 224 (248)
....+.+.+.+..+.... |..++||.|+++|||.|++.|++ ++.+++||| +.||.+||+.++
T Consensus 732 l~~~l~~~l~~~~~~v~~-G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GD----D~nDedMF~~~~ 801 (854)
T PLN02205 732 LLDHLESVLANEPVTVKS-GQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGD----DRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHhcCceEEEE-CCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcC----CccHHHHHHHhh
Confidence 334444444332233333 68999999999999999999973 678999999 999999999774
No 33
>PLN03017 trehalose-phosphatase
Probab=99.84 E-value=2.5e-19 Score=154.17 Aligned_cols=211 Identities=19% Similarity=0.241 Sum_probs=131.5
Q ss_pred ccceEEEEecCCCCC---C-CCC-CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498 5 KQGLLALFDVDGTLT---A-PRK-AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD 79 (248)
Q Consensus 5 ~~~kli~~DlDGTLl---~-~~~-~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~ 79 (248)
.+..+||+|+||||+ + ++. .+++++.++|++|.+.+.++|+|||++..+.+.++. .. -+++++||+.+...
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l---~~-l~l~g~hGa~i~~p 184 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL---AE-LYYAGSHGMDIKGP 184 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc---cC-ceEEEcCCcEEecC
Confidence 456899999999999 3 444 699999999999993399999999999998877553 12 38999999998862
Q ss_pred -CcEEEE------eecccccc-hHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhcccc
Q 038498 80 -GKLIGT------QSLKSFLG-GEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKI 151 (248)
Q Consensus 80 -~~~i~~------~~~~~~i~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (248)
+..... ..+..... ...+.++.+.+.+.... ..|.++|...- .+..+++..+....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~-----~pGa~VE~K~~--~vavHyR~ad~~~~--------- 248 (366)
T PLN03017 185 AKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKS-----TPGAKVENHKF--CASVHFRCVDEKKW--------- 248 (366)
T ss_pred CCcceeccccccccccccchhhHHHHHHHHHHHHHHHhc-----CCCCEEEecCc--EEEEEcCcCCHHHH---------
Confidence 221110 00100000 12334444444443211 34667664332 22233343322110
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeC-CCCHHHHHHHhhc-c-------CCEEEEcCCCCCCCCCHHHHhh
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ-GWDKTYCLRYLDD-F-------NEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~-~~~K~~al~~l~~-~-------~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
.+.. .....+...++++ .... |...+|+.|. ++|||.|+++|++ . .-.++||| +..|.+||+.
T Consensus 249 ~~l~-~~~~~vl~~~~~l--~v~~-GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGD----D~TDEDaF~~ 320 (366)
T PLN03017 249 SELV-LQVRSVLKNFPTL--KLTQ-GRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGD----DRTDEDAFKM 320 (366)
T ss_pred HHHH-HHHHHHHHhCCCc--EEeC-CCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCC----CCccHHHHHH
Confidence 0011 1223344455654 3333 6899999995 9999999999997 1 14899999 9999999995
Q ss_pred C-----CCceEEccCchhhHHHHhhhhcc
Q 038498 223 E-----RTVGHTVTSPEDTMEKCKALFLA 246 (248)
Q Consensus 223 ~-----g~~~~av~Na~~~~k~~A~~v~~ 246 (248)
. | .+|.|+..+.+ ..|.|.++
T Consensus 321 L~~~~~G-~gI~VG~~~k~--T~A~y~L~ 346 (366)
T PLN03017 321 LRDRGEG-FGILVSKFPKD--TDASYSLQ 346 (366)
T ss_pred HhhcCCc-eEEEECCCCCC--CcceEeCC
Confidence 4 5 78888863322 34444443
No 34
>PLN02151 trehalose-phosphatase
Probab=99.79 E-value=1.2e-17 Score=143.52 Aligned_cols=198 Identities=19% Similarity=0.263 Sum_probs=126.6
Q ss_pred ccceEEEEecCCCCC----CCCC-CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498 5 KQGLLALFDVDGTLT----APRK-AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD 79 (248)
Q Consensus 5 ~~~kli~~DlDGTLl----~~~~-~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~ 79 (248)
.+..++|+|+||||+ +++. .++++++++|++|.+...++|+|||++..+.+.++. ..+ ++++++|+.+...
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~---~~l-~laGsHG~e~~~p 171 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKL---TEL-YYAGSHGMDIKGP 171 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCC---ccc-eEEEeCCceeecC
Confidence 356899999999999 4444 689999999999995588999999999999988874 223 7889999998752
Q ss_pred --CcEEE-E---eecccccc---hHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccc
Q 038498 80 --GKLIG-T---QSLKSFLG---GEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDK 150 (248)
Q Consensus 80 --~~~i~-~---~~~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (248)
+.... . ...+ .. ...+.++.+.+.+.... ..|.++|.... .+..+++..+....
T Consensus 172 ~~g~~~~~~~~~~~~~--~~~~~~~~i~~v~~~l~~~~~~-----~pG~~VE~K~~--slavHYR~a~~~~~-------- 234 (354)
T PLN02151 172 EQGSKYKKENQSLLCQ--PATEFLPVINEVYKKLVEKTKS-----IPGAKVENNKF--CASVHFRCVEENKW-------- 234 (354)
T ss_pred CCCccccccccccccc--cchhhHHHHHHHHHHHHHHHhc-----CCCCEEEecCc--EEEEEeCCCChHHH--------
Confidence 21110 0 0010 01 12233344444332111 34667664332 22233343322100
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeC-CCCHHHHHHHhhc----c----CCEEEEcCCCCCCCCCHHHHh
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQ-GWDKTYCLRYLDD----F----NEIHFFGDKTYKGGNDHEIFE 221 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~-~~~K~~al~~l~~----~----~~~~aiGD~~~~~~NDi~M~~ 221 (248)
.+.. .....+...++++ .... |...+|+.|. ++|||.|++.|++ . .-+++||| +..|.+||+
T Consensus 235 -~~l~-~~l~~v~~~~~~l--~v~~-GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGD----D~TDEDaF~ 305 (354)
T PLN02151 235 -SDLA-NQVRSVLKNYPKL--MLTQ-GRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGD----DRTDEDAFK 305 (354)
T ss_pred -HHHH-HHHHHHHhhCCCc--EEec-CCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcC----CCcHHHHHH
Confidence 0011 2223444555654 3333 6899999995 9999999999997 1 12899999 999999999
Q ss_pred hC-----CCceEEccCc
Q 038498 222 SE-----RTVGHTVTSP 233 (248)
Q Consensus 222 ~~-----g~~~~av~Na 233 (248)
.. | .++.|+..
T Consensus 306 ~L~~~~~G-~gI~Vg~~ 321 (354)
T PLN02151 306 ILRDKKQG-LGILVSKY 321 (354)
T ss_pred HHhhcCCC-ccEEeccC
Confidence 53 5 67888753
No 35
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.78 E-value=1.2e-17 Score=138.16 Aligned_cols=213 Identities=22% Similarity=0.243 Sum_probs=108.2
Q ss_pred EEecCCCCCCCCC-----CCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEE
Q 038498 11 LFDVDGTLTAPRK-----AATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLI 83 (248)
Q Consensus 11 ~~DlDGTLl~~~~-----~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i 83 (248)
|+|+||||.+-.. .++++++++|++|.+. ..|+|+|||+...+....+. ..+ +++++||+.+...+...
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~---~~i-~l~gehG~e~~~~~~~~ 76 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGI---PNI-GLAGEHGAEIRRPGGSE 76 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S----SS--EEEEGGGTEEEETTE-E
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCC---CCc-eEEEEeeEEeccCcccc
Confidence 6999999997643 5789999999999988 78999999999994444443 233 78999999999866533
Q ss_pred EEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHHHHH
Q 038498 84 GTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLR 163 (248)
Q Consensus 84 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (248)
...... ....++.+.+.+.++.+... ..|.+++.+..-+ ..+++.+...... . ...+..+.+ ..+.
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~l~~~~~~-----~pG~~iE~K~~sv--~~Hyr~~~~~~~~----~-~~~~l~~~l-~~~~ 142 (235)
T PF02358_consen 77 WTNLPA-DEDLEWKDEVREILEYFAER-----TPGSFIEDKEFSV--AFHYRNAPPEFGE----A-QARELAEQL-REIL 142 (235)
T ss_dssp EE-TTG-GGGHHHHHHHHHHHTTHHHH-----STT-EEEEETTEE--EEE-TTS-ST---------THHHHHHHH-HHHH
T ss_pred cccccc-ccchHHHHHHHHHHHHHHhh-----ccCcEEEECCeEE--EEEecCCCcchhh----h-HHHHHHHHH-HHHH
Confidence 332111 12334555555555554222 3566776543322 2233332211000 0 000111122 2223
Q ss_pred HHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc--c------CCEEEEcCCCCCCCCCHHHHhhCCC-----ceEEc
Q 038498 164 EKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--F------NEIHFFGDKTYKGGNDHEIFESERT-----VGHTV 230 (248)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~--~------~~~~aiGD~~~~~~NDi~M~~~~g~-----~~~av 230 (248)
...++ +.... |...+|+.|.+.+||.|++.|++ . +-++++|| +..|.+||+...- .++-|
T Consensus 143 ~~~~~--~~v~~-g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GD----D~tDE~~f~~~~~~~~~~~~i~V 215 (235)
T PF02358_consen 143 ASHPG--LEVVP-GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGD----DRTDEDAFRALRELEEGGFGIKV 215 (235)
T ss_dssp HHH-T---EEEE--SSEEEEE-TT--HHHHHHHHHTTS---------EEEEES----SHHHHHHHHTTTTS----EEEEE
T ss_pred HhCCC--EEEEE-CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecC----CCCCHHHHHHHHhcccCCCCeEE
Confidence 33344 44444 57899999999999999999997 2 36999999 9999999997531 57777
Q ss_pred cCch-hhHHHHhhhhccCC
Q 038498 231 TSPE-DTMEKCKALFLAKP 248 (248)
Q Consensus 231 ~Na~-~~~k~~A~~v~~~~ 248 (248)
+..+ .+.+..|+|-++.|
T Consensus 216 ~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 216 GSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp S------------------
T ss_pred EeecccccccccccccccC
Confidence 7754 56778888877766
No 36
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1e-15 Score=126.93 Aligned_cols=190 Identities=22% Similarity=0.310 Sum_probs=128.4
Q ss_pred ccceEEEEecCCCCCCCC-----CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEE
Q 038498 5 KQGLLALFDVDGTLTAPR-----KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAH 77 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~-----~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~ 77 (248)
.+.+++++|+||||.+-- ..++++++++|++|..+ ..+++.|||+...+...++. ... +++++||+++.
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v---~~i-~l~aehGa~~r 91 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGV---PGI-GLIAEHGAEVR 91 (266)
T ss_pred ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCC---CCc-cEEEecceEEe
Confidence 467999999999999642 24689999999999999 68999999999999988884 223 79999999996
Q ss_pred e-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchH
Q 038498 78 K-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRP 156 (248)
Q Consensus 78 ~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (248)
+ +|+.......+ ....+.+++.+.++.+..+ ..|.|++.....+. .+++.+..+.. ...
T Consensus 92 ~~~g~~~~~~~~~--~~~~~~~~v~~~l~~~v~r-----~pGs~iE~K~~a~~--~Hyr~a~~~~~-----------~~~ 151 (266)
T COG1877 92 DPNGKWWINLAEE--ADLRWLKEVAAILEYYVER-----TPGSYIERKGFAVA--LHYRNAEDDEG-----------AAL 151 (266)
T ss_pred cCCCCeeEecCHH--HHhhHHHHHHHHHHHHhhc-----CCCeEEEEcCcEEE--EeeccCCchhh-----------HHH
Confidence 6 77775444321 1122233555555555222 45777775443322 23333322111 011
Q ss_pred HHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc---cC--CEEEEcCCCCCCCCCHHHHhhCC
Q 038498 157 KMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD---FN--EIHFFGDKTYKGGNDHEIFESER 224 (248)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~---~~--~~~aiGD~~~~~~NDi~M~~~~g 224 (248)
..........+ ..+.... |...+|+.|.++|||.+++++++ .+ -+++.|| +.-|..||+++.
T Consensus 152 a~~~~~~~~~~-~~~~v~~-gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGD----D~TDE~~F~~v~ 218 (266)
T COG1877 152 ALAEAATLINE-LKLRVTP-GKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGD----DLTDEDAFAAVN 218 (266)
T ss_pred HHHHHHhcccc-ccEEEEe-CceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCC----CCccHHHHHhhc
Confidence 11111112112 1155555 68999999999999999999997 32 4999999 999999999875
No 37
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.68 E-value=3e-15 Score=142.54 Aligned_cols=193 Identities=17% Similarity=0.197 Sum_probs=125.4
Q ss_pred ccceEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCc
Q 038498 5 KQGLLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGL 74 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa 74 (248)
.+.+++++|+||||++... .++++++++|++|.+. ..|+|+|||+...+.+.++. ..+ +++++||+
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~---~~l-~l~aeHG~ 580 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE---YNI-WLAAENGM 580 (797)
T ss_pred ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC---CCC-cEEEeCCE
Confidence 4568999999999996522 3688999999999988 89999999999999999985 123 78999999
Q ss_pred EEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhcccccc
Q 038498 75 VAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHN 153 (248)
Q Consensus 75 ~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (248)
.+.. ++++.. .++..++.++.+.+...++.+... ..|.++|.+..- +..+++....+.- ..
T Consensus 581 ~~r~~~~~w~~--~~~~~~~~~w~~~v~~~l~~~~~r-----tpGs~iE~K~~s--la~HyR~adp~~g---------~~ 642 (797)
T PLN03063 581 FLRHTSGEWVT--TMPEHMNLDWVDGVKNVFKYFTDR-----TPRSYVEKSETS--LVWNYEYADVEFG---------RA 642 (797)
T ss_pred EEecCCCceee--ccccccChhHHHHHHHHHHHHHHh-----CCCcEEEEcCeE--EEEEcCCCChHHH---------HH
Confidence 9765 444421 111112334444444555554222 457787754432 2233333311100 00
Q ss_pred chHHHHHHHHHHc-CCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----------cCCEEEEcCCCCCCC-CCHHHH
Q 038498 154 IRPKMVSVLREKF-AHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----------FNEIHFFGDKTYKGG-NDHEIF 220 (248)
Q Consensus 154 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----------~~~~~aiGD~~~~~~-NDi~M~ 220 (248)
...++...+.+.. ++..+.+.. |...+|+.|.++|||.|++.+++ .+-++++|| +. -|-+||
T Consensus 643 ~a~el~~~l~~~~~~~~~~~v~~-Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd----d~~~DEdmF 717 (797)
T PLN03063 643 QARDMLQHLWAGPISNASVDVVR-GQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY----FLEKDEDVY 717 (797)
T ss_pred HHHHHHHHHHHhhccCCCcEEEE-CCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC----CCCCcHHHH
Confidence 1123333442321 222344444 68999999999999999999985 256999999 85 499999
Q ss_pred hhCC
Q 038498 221 ESER 224 (248)
Q Consensus 221 ~~~g 224 (248)
++.+
T Consensus 718 ~~l~ 721 (797)
T PLN03063 718 TFFE 721 (797)
T ss_pred Hhcc
Confidence 9654
No 38
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.68 E-value=3e-15 Score=142.62 Aligned_cols=192 Identities=19% Similarity=0.230 Sum_probs=125.0
Q ss_pred ccceEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceE
Q 038498 5 KQGLLALFDVDGTLTAPR--------------KAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYV 68 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~ 68 (248)
.+.+++++|+||||++.. ..++++++++|++|.+. ..|+|+|||+...+.+.++.. .+ ++
T Consensus 589 a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~---~L-~L 664 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF---DM-WL 664 (934)
T ss_pred ccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC---Cc-eE
Confidence 456899999999999631 13678899999999988 899999999999999999861 23 78
Q ss_pred EecCCcEEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhh
Q 038498 69 FSENGLVAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFER 147 (248)
Q Consensus 69 i~~nGa~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (248)
+++||+.+.. ++++.. .++..++.++.+.+...++.+... ..|.++|.+..- +.++++....+.-
T Consensus 665 aAEHG~~~R~~~~~w~~--~~~~~~~~~W~~~v~~ile~~~eR-----tPGS~IE~K~~S--LawHYR~ADpe~g----- 730 (934)
T PLN03064 665 AAENGMFLRHTKGEWMT--TMPEHLNMDWVDSVKHVFEYFTER-----TPRSHFETRETS--LVWNYKYADVEFG----- 730 (934)
T ss_pred EeeCCeEEecCCCccee--ccccccchHHHHHHHHHHHHHHhc-----CCCcEEEEcCcE--EEEEecCCChhhH-----
Confidence 9999999766 444421 122112334444444444444222 457787754432 2233333211100
Q ss_pred ccccccchHHHHHHHHHH-cCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----------cCCEEEEcCCCCCCCC
Q 038498 148 YDKIHNIRPKMVSVLREK-FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----------FNEIHFFGDKTYKGGN 215 (248)
Q Consensus 148 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----------~~~~~aiGD~~~~~~N 215 (248)
.....++...+.+. +.+..+.+.. |...+|+.|.++|||.|++.+++ ++-++++|| +..
T Consensus 731 ----~~qA~el~~~L~~~~~~~~~v~V~~-Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD----d~~ 801 (934)
T PLN03064 731 ----RLQARDMLQHLWTGPISNAAVDVVQ-GSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH----FLG 801 (934)
T ss_pred ----HHHHHHHHHHHHhhhccCCCcEEEe-CCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC----CCC
Confidence 00111233334222 1122344444 68999999999999999999996 356999999 986
Q ss_pred -CHHHHhhC
Q 038498 216 -DHEIFESE 223 (248)
Q Consensus 216 -Di~M~~~~ 223 (248)
|-+||++.
T Consensus 802 ~DEdmF~~l 810 (934)
T PLN03064 802 KDEDIYTFF 810 (934)
T ss_pred CcHHHHHHH
Confidence 99999964
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.61 E-value=8.3e-15 Score=115.57 Aligned_cols=213 Identities=18% Similarity=0.129 Sum_probs=118.1
Q ss_pred CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeC
Q 038498 1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKD 79 (248)
Q Consensus 1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~ 79 (248)
|-++..+++||+||||||+++... .+.....|.+|++. +.|+++|.++..++...... +.....++|++||+.||-.
T Consensus 1 m~s~~~~~lIFtDlD~TLl~~~ye-~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~-l~v~~~p~iaEnG~aI~~p 78 (274)
T COG3769 1 MFSIQMPLLIFTDLDGTLLPHSYE-WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKS-LGVQGLPLIAENGAAIYLP 78 (274)
T ss_pred CCccccceEEEEcccCcccCCCCC-CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHh-cCCCCCceeecCCceEEec
Confidence 445678899999999999995333 44557788899999 99999999998764433332 1223358999999999852
Q ss_pred Cc---------EEEEeeccc-ccchHHHHHHHHHHHHhhcccccccccccccee-ccccceecccCCCC-Chhhhhhhhh
Q 038498 80 GK---------LIGTQSLKS-FLGGEKLKEFINFTLHYIADLDIPIKRGTFIEF-RSGMLNISPIGRNC-SQEERDEFER 147 (248)
Q Consensus 80 ~~---------~i~~~~~~~-~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 147 (248)
.. .+....... -+.-+.+.+.++.++.. +++.. |..- ......+.-..++. +.....++..
T Consensus 79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~---~g~~~----~~~~d~~ei~e~TGlpre~aaLa~~rEyse 151 (274)
T COG3769 79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH---FGFTT----FDDVDDEEIAEWTGLPREQAALAMLREYSE 151 (274)
T ss_pred ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH---hCeeE----eccCCHHHHHHHhCCChHHhHHHHHHHhhh
Confidence 22 111111100 01123333333333332 11110 1000 00000000000000 0000011110
Q ss_pred --cccc-ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc------cCC-EEEEcCCCCCCCCCH
Q 038498 148 --YDKI-HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD------FNE-IHFFGDKTYKGGNDH 217 (248)
Q Consensus 148 --~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~------~~~-~~aiGD~~~~~~NDi 217 (248)
+--. .+....+...|.+. .+.+.-| ..+--+.-....||.|++.+++ ..+ +++.|| +.||+
T Consensus 152 ti~~rs~d~~~~~~~~~L~e~----glt~v~g-arf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GD----g~nD~ 222 (274)
T COG3769 152 TIIWRSSDERMAQFTARLNER----GLTFVHG-ARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGD----GPNDA 222 (274)
T ss_pred heeecccchHHHHHHHHHHhc----CceEEec-cceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCC----CCCcc
Confidence 0000 11222344445443 2555543 4455566667779999999997 344 999999 99999
Q ss_pred HHHhhCCCceEEccC
Q 038498 218 EIFESERTVGHTVTS 232 (248)
Q Consensus 218 ~M~~~~g~~~~av~N 232 (248)
+||+... +++.|++
T Consensus 223 Pl~ev~d-~AfiV~~ 236 (274)
T COG3769 223 PLLEVMD-YAFIVKG 236 (274)
T ss_pred cHHHhhh-hheeecc
Confidence 9999997 9999996
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.48 E-value=6.9e-15 Score=126.36 Aligned_cols=55 Identities=16% Similarity=0.247 Sum_probs=51.0
Q ss_pred CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
+..|+.+++.+++ ++++++||| +.||++|++.+| .++|| ||.|.+|+.|+.++..
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGD----g~NDl~m~~~AG-lgiA~-nAkp~Vk~~Ad~~i~~ 305 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGD----GANDLPMIKAAG-LGIAY-HAKPKVNEQAQVTIRH 305 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEEC----CHHHHHHHHHCC-CeEEe-CCCHHHHhhCCEEecC
Confidence 4689999999996 789999999 999999999999 99999 9999999999998754
No 41
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.41 E-value=9.1e-13 Score=103.06 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=40.6
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
++++++||| +.||++|++.+| .++||+||.+.+|++|++|+.+
T Consensus 98 ~~ev~~iGD----~~nDi~~~~~ag-~~~am~nA~~~lk~~A~~I~~~ 140 (169)
T TIGR02726 98 DAEVCYVGD----DLVDLSMMKRVG-LAVAVGDAVADVKEAAAYVTTA 140 (169)
T ss_pred HHHEEEECC----CHHHHHHHHHCC-CeEECcCchHHHHHhCCEEcCC
Confidence 568999999 999999999999 9999999999999999999854
No 42
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.41 E-value=6.5e-13 Score=102.70 Aligned_cols=44 Identities=11% Similarity=0.127 Sum_probs=41.7
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP 248 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~ 248 (248)
+++++++|| +.||++|++.+| .+++|.|+.+.+++.|++++.+|
T Consensus 92 ~~~~~~vGD----s~~D~~~~~~ag-~~~~v~~~~~~~~~~a~~i~~~~ 135 (154)
T TIGR01670 92 PENVAYIGD----DLIDWPVMEKVG-LSVAVADAHPLLIPRADYVTRIA 135 (154)
T ss_pred HHHEEEECC----CHHHHHHHHHCC-CeEecCCcCHHHHHhCCEEecCC
Confidence 678999999 999999999999 99999999999999999999776
No 43
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.39 E-value=6.1e-13 Score=105.80 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=39.4
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 246 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~ 246 (248)
++++++||| +.||++|++.+| .+++|+++.+.++..|++|+.
T Consensus 112 ~~ev~~VGD----s~~D~~~a~~aG-~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 112 PEQVAYIGD----DLIDWPVMEKVG-LSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred HHHEEEECC----CHHHHHHHHHCC-CeEecCChhHHHHHhCCEEec
Confidence 679999999 999999999999 889999999999999999885
No 44
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.35 E-value=2e-11 Score=117.41 Aligned_cols=197 Identities=18% Similarity=0.195 Sum_probs=111.4
Q ss_pred ceEEE--EecCCCCCCCCCCCCHHHHHHHHHHh----hc-CeEEEEcCCChHHHHHHhcccccC--CCceEEecCCcEEE
Q 038498 7 GLLAL--FDVDGTLTAPRKAATPQMLEFMRELR----KV-VTVGVVGGSDLSKISEQLGKTVID--EYDYVFSENGLVAH 77 (248)
Q Consensus 7 ~kli~--~DlDGTLl~~~~~i~~~~~~al~~l~----~~-~~v~iaTGR~~~~~~~~l~~~~~~--~~~~~i~~nGa~i~ 77 (248)
.++++ +|+|+| +. ..+...+.++.++ .. +.|+++|||++.++.+.+...-.+ .||.+||.-|+.||
T Consensus 770 ~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIy 844 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELY 844 (1050)
T ss_pred ceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCccee
Confidence 45555 999999 21 2333334444444 23 899999999999988877663223 68999999999999
Q ss_pred eC-------CcEEEEeecccccc----hHHHHHHHHHHHHhhccccccccccc-----ccee--ccccceecccCCCCCh
Q 038498 78 KD-------GKLIGTQSLKSFLG----GEKLKEFINFTLHYIADLDIPIKRGT-----FIEF--RSGMLNISPIGRNCSQ 139 (248)
Q Consensus 78 ~~-------~~~i~~~~~~~~i~----~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~ 139 (248)
+. +.......|..+|+ .+.+...+..+... + ..+.+. ..+. .+....+
T Consensus 845 y~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~---~--~~~~~~~~~~l~~Q~~~~q~~~k~--------- 910 (1050)
T TIGR02468 845 YPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAAS---I--NEKKGENEEQIVEEDEESSTDHCY--------- 910 (1050)
T ss_pred ccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhh---c--ccccccccccceecChhhCCCceE---------
Confidence 84 34444433332232 22233222211111 0 000000 0000 0000111
Q ss_pred hhhhhhhhcccc-ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCE-EEEcCCCCC
Q 038498 140 EERDEFERYDKI-HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEI-HFFGDKTYK 212 (248)
Q Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~-~aiGD~~~~ 212 (248)
.|+..+.. ....+++.+.|..+--+..+.++. +...+||+|..+||+.||++|+. .+++ ++.||
T Consensus 911 ----SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~-~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGd---- 981 (1050)
T TIGR02468 911 ----AFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCR-NGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGE---- 981 (1050)
T ss_pred ----EEEecCcccCccHHHHHHHHHhCCCceEEEeec-CCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEecc----
Confidence 11111111 112345555555543234455553 35899999999999999999996 6777 55999
Q ss_pred CCC-CHH-HHhhCCCceEEccC
Q 038498 213 GGN-DHE-IFESERTVGHTVTS 232 (248)
Q Consensus 213 ~~N-Di~-M~~~~g~~~~av~N 232 (248)
++| |++ |+.-.. .+|.+..
T Consensus 982 SGntD~e~Ll~G~~-~tvi~~g 1002 (1050)
T TIGR02468 982 SGDTDYEGLLGGLH-KTVILKG 1002 (1050)
T ss_pred CCCCCHHHHhCCce-eEEEEec
Confidence 999 966 655554 7777655
No 45
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=99.28 E-value=1.1e-11 Score=96.04 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=66.0
Q ss_pred EEEEecCCCCCCCC-----------CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHH---HHhcc----cccCCCceEE
Q 038498 9 LALFDVDGTLTAPR-----------KAATPQMLEFMRELRKV-VTVGVVGGSDLSKIS---EQLGK----TVIDEYDYVF 69 (248)
Q Consensus 9 li~~DlDGTLl~~~-----------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~---~~l~~----~~~~~~~~~i 69 (248)
+|++|+||||++++ ..+++.+.+++++++++ ++++++|||++.... +.+.. ....+..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 48999999999998 67899999999999999 999999999987542 33322 0012235899
Q ss_pred ecCCcEEEe-CCcEEEEeecccccchHHHHHHHHH
Q 038498 70 SENGLVAHK-DGKLIGTQSLKSFLGGEKLKEFINF 103 (248)
Q Consensus 70 ~~nGa~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~ 103 (248)
+.||+.+.. .++.+...+. .+..+.++.+.+.
T Consensus 81 ~~~g~~~~~~~~e~i~~~~~--~~K~~~l~~i~~~ 113 (157)
T smart00775 81 LSPDRLFAALHREVISKKPE--VFKIACLRDIKSL 113 (157)
T ss_pred EcCCcchhhhhcccccCCHH--HHHHHHHHHHHHh
Confidence 999999875 5566655542 1233444444443
No 46
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=99.25 E-value=1.5e-10 Score=98.64 Aligned_cols=208 Identities=20% Similarity=0.248 Sum_probs=124.1
Q ss_pred cceEEEEecCCCCCCCCCCC--CHHHHHHHHHHhhc-CeEEEEcCCChHH----------HHHHhccc--c---------
Q 038498 6 QGLLALFDVDGTLTAPRKAA--TPQMLEFMRELRKV-VTVGVVGGSDLSK----------ISEQLGKT--V--------- 61 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i--~~~~~~al~~l~~~-~~v~iaTGR~~~~----------~~~~l~~~--~--------- 61 (248)
+.+||-||=|+||.++++.+ +..++..|-+|.++ +.|+|+|.-.|+. +...+... +
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk~~l~ 225 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQKSNLY 225 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHhcCEE
Confidence 89999999999999998887 77889999999999 9999999999863 22222211 0
Q ss_pred --cCCCceEEecCCc----EEEe-CCcEEEEeecccccchHHHHHHHHHHHHhhc----cccccccccccceecccccee
Q 038498 62 --IDEYDYVFSENGL----VAHK-DGKLIGTQSLKSFLGGEKLKEFINFTLHYIA----DLDIPIKRGTFIEFRSGMLNI 130 (248)
Q Consensus 62 --~~~~~~~i~~nGa----~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 130 (248)
.++.+|+.-.+-. +.+. +.++...... .|+.+++.++++..+.... .+.+|. -+-...+.+.+
T Consensus 226 VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~--~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa----~IiRK~RAVGi 299 (408)
T PF06437_consen 226 VMGGESNYLFRYDPESPHGLEFVPREEWLLPEMK--TWSEEDITELLDIAEAALRDCVKRLNLPA----TIIRKERAVGI 299 (408)
T ss_pred EecccceeEEEecCCCCCCeEEccHHhccCcccc--CcCHHHHHHHHHHHHHHHHHHHHHcCCCe----eEEeecceeeE
Confidence 1112222222221 1111 2223322222 3678899999888777522 233331 11111222222
Q ss_pred cccCC-CCChhhhhhhhhccccccchHHHHHHHHHHc----CCce---EEEEecCceEEEEeeCCCCHHHHHHHhhc---
Q 038498 131 SPIGR-NCSQEERDEFERYDKIHNIRPKMVSVLREKF----AHLN---LTFSIGGQISFDVFPQGWDKTYCLRYLDD--- 199 (248)
Q Consensus 131 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~---~~~~~~~~~~~di~~~~~~K~~al~~l~~--- 199 (248)
.|... .+ ..+..|+.+-.++..+ ++-. |.+..|. |++-.=.+|..|++.+++
T Consensus 300 vP~~~~ki-------------~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGs----DVwVDIGdKs~GV~~lQ~y~~ 362 (408)
T PF06437_consen 300 VPKPGVKI-------------IREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGS----DVWVDIGDKSLGVRALQKYFD 362 (408)
T ss_pred ecCCCCcc-------------hhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCc----ceEEEcCCcHHhHHHHHHHHH
Confidence 23110 00 1123344433333332 2112 3344333 444455788888888775
Q ss_pred ------cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCchhhHH
Q 038498 200 ------FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPEDTME 238 (248)
Q Consensus 200 ------~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~~~~k 238 (248)
+.+++++||+|...+ ||+..-.++ ..++++|+.+.+.
T Consensus 363 ~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~--~t~WIasP~ETv~ 406 (408)
T PF06437_consen 363 PEGGIKPSETLHVGDQFLSAGANDFKARLAC--TTAWIASPQETVE 406 (408)
T ss_pred hccCCCccceeeehhhhhccCCcchhhhhhc--eeeEecCHHHHhh
Confidence 789999999999999 999987654 7999999988653
No 47
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=99.03 E-value=9.5e-10 Score=81.52 Aligned_cols=46 Identities=15% Similarity=0.274 Sum_probs=39.3
Q ss_pred ceEEEEecCCCCCCCCC------CCCHHHHHHHHHHhhc-CeEEEEcCCChHH
Q 038498 7 GLLALFDVDGTLTAPRK------AATPQMLEFMRELRKV-VTVGVVGGSDLSK 52 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~ 52 (248)
+|+|+||+||||+..+. .+.+.++++|++++++ +.|+++|||+...
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 37999999999997642 2568899999999999 9999999999764
No 48
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.00 E-value=1.3e-09 Score=81.10 Aligned_cols=51 Identities=25% Similarity=0.432 Sum_probs=44.2
Q ss_pred EEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 9 LALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 9 li~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
+++||+||||+.... .+.+.+.+.|++|+++ +.++++|||....+...+..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999999875 7889999999999999 99999999997766665553
No 49
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=98.98 E-value=1.7e-08 Score=94.72 Aligned_cols=187 Identities=20% Similarity=0.198 Sum_probs=120.8
Q ss_pred ccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCC
Q 038498 3 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDG 80 (248)
Q Consensus 3 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~ 80 (248)
.+.+.++|++|.|||++...+.. +...|+.|... ..+.|++||+...+..-+.. .... +++++||+.+...+
T Consensus 499 ~~s~~rli~ldyd~t~~~~~~~~---~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~--~~~l-gl~aEhG~f~r~~~ 572 (732)
T KOG1050|consen 499 KKSKKRLILLDYDLTLIPPRSIK---AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFG--CKNL-GLAAEHGYFVRIPG 572 (732)
T ss_pred hhccceEEEecccccccCCCCch---HHHHHHHHhcCCCCeEEEEEccCchhhhhhccc--cccc-eeecccCceeccCC
Confidence 45788999999999999875543 88889998888 89999999998877665543 1223 88999999998865
Q ss_pred cEEEEeecccccchHHHHHHHHHHHHhhccccccccccccceeccccceecccCCCCChhhhhhhhhccccccchHHHHH
Q 038498 81 KLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVS 160 (248)
Q Consensus 81 ~~i~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (248)
.+ ...+. +.++.+.+-+.++.|..+ ++|+|++....... +.++.+.. ++ ......++..
T Consensus 573 ~w--~~~~~---~~~w~~~v~~i~~~~~er-----t~GS~ie~k~~~l~--~hy~~ad~-~~--------g~~qA~el~~ 631 (732)
T KOG1050|consen 573 KW--ETCVL---DLDWKDLVKDIFQYYTER-----TPGSYIERKETALV--WHYRNADP-EF--------GELQAKELLE 631 (732)
T ss_pred ce--eeecc---cccHHHHHHHHHHHHHhc-----CCCceecccCceEE--EeeeccCc-ch--------hHHHHHHHHH
Confidence 53 33221 223322222223332111 56778775443321 22222211 10 0001112223
Q ss_pred HHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498 161 VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE 223 (248)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~ 223 (248)
.|.. .+..+.... |...+++-|.+++||.++..+.. ++-++++|| ..-|-+||...
T Consensus 632 ~l~~--~~~~~~v~~-g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c~g~----d~tDed~~~~~ 692 (732)
T KOG1050|consen 632 HLES--KNEPVEVVR-GKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLCIGD----DRTDEDMFEFI 692 (732)
T ss_pred Hhcc--cCCCeEEEe-cCceEEEcccccchHHHHHHHHHhcCCCcceEEEecC----CCChHHHHHHH
Confidence 3333 233455555 58999999999999999999985 577999999 99999999953
No 50
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.97 E-value=3.3e-09 Score=86.15 Aligned_cols=89 Identities=20% Similarity=0.262 Sum_probs=60.6
Q ss_pred cccchHHHHHHHHHHcCC---c--eEEEEec--CceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHH
Q 038498 151 IHNIRPKMVSVLREKFAH---L--NLTFSIG--GQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHE 218 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~---~--~~~~~~~--~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~ 218 (248)
++.-...++..+.+.++- + .+....| +...+-..-.+-+|...++.+++ +++++|+|| |.||++
T Consensus 99 iSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gD----s~nDlp 174 (212)
T COG0560 99 ISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGD----SANDLP 174 (212)
T ss_pred EcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcC----chhhHH
Confidence 344455667777777641 1 1111110 11222334445579999999886 679999999 999999
Q ss_pred HHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 219 IFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 219 M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
||+.+| +++++ |+.+.+++.|+.-.
T Consensus 175 ml~~ag-~~ia~-n~~~~l~~~a~~~~ 199 (212)
T COG0560 175 MLEAAG-LPIAV-NPKPKLRALADVRI 199 (212)
T ss_pred HHHhCC-CCeEe-CcCHHHHHHHHHhc
Confidence 999999 99987 67778888887543
No 51
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.94 E-value=1.3e-09 Score=88.71 Aligned_cols=46 Identities=13% Similarity=-0.059 Sum_probs=36.8
Q ss_pred eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
+...-.|...++++++ ++++++||| +.+|+.+.+.+|+.++++..+
T Consensus 134 ~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGD----s~~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 134 VEHAKPDPEPVLKALELLGAKPEEALMVGD----NHHDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred CCCCCCCcHHHHHHHHHcCCCHHHEEEECC----CHHHHHHHHHCCCeEEEEcCC
Confidence 3445566777777775 789999999 999999999999878877654
No 52
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.91 E-value=7.1e-09 Score=86.43 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=55.0
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC---CChHHHHHHhccc-ccCCCceEEecCCcEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG---SDLSKISEQLGKT-VIDEYDYVFSENGLVAH 77 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG---R~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~ 77 (248)
+|+++||+||||++.+..++ .+.++|++|+++ +.++++|| |+...+.+.+... +....+.+++.+|+...
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CCEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 47899999999999877666 789999999999 99999995 8887766555541 23345678888887643
No 53
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.82 E-value=1.4e-08 Score=84.93 Aligned_cols=72 Identities=21% Similarity=0.349 Sum_probs=54.9
Q ss_pred cceEEEEecCCCCCCCCCCC---CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe
Q 038498 6 QGLLALFDVDGTLTAPRKAA---TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i---~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~ 78 (248)
..++|+|||||||+++...+ ++.+.++|.+|+++ +.++++|+++...+.+.+... +..-++ +|.++|.....
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd-vIIs~Gdv~~~ 201 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD-IIISGGHKAEE 201 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC-EEEECCccccC
Confidence 56899999999999997765 69999999999999 999999988877655544441 222343 55667766443
No 54
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.76 E-value=6.9e-08 Score=78.71 Aligned_cols=53 Identities=19% Similarity=0.251 Sum_probs=46.4
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
.|...++.+++ ++++++||| +.||+++++.+| .++++ |+.+.++..|+++..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGD----s~~Di~aa~~ag-~~i~~-~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGD----GANDLSMIKAAG-LGIAF-NAKPKLQQKADICINK 209 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEEC----CHHHHHHHHhCC-CeEEe-CCCHHHHHhchhccCC
Confidence 48888888775 678999999 999999999999 89987 6889999999998754
No 55
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.70 E-value=6.3e-09 Score=78.37 Aligned_cols=55 Identities=18% Similarity=0.198 Sum_probs=47.6
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
.+|-.+.+.|++ ++++.++|| +.||+++|+.+| .++||++|++++++.|++|+.+
T Consensus 82 ~dK~~a~~~L~~~~~l~~e~~ayiGD----D~~Dlpvm~~vG-ls~a~~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 82 SDKLAAFEELLKKLNLDPEEVAYVGD----DLVDLPVMEKVG-LSVAVADAHPLLKQRADYVTSK 141 (170)
T ss_pred HhHHHHHHHHHHHhCCCHHHhhhhcC----ccccHHHHHHcC-CcccccccCHHHHHhhHhhhhc
Confidence 355555555554 779999999 999999999999 9999999999999999999953
No 56
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.70 E-value=6.9e-09 Score=87.65 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=37.5
Q ss_pred eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
++..-.+...++.+++ ++++++||| +.||+.+.+.+|+.+++|.++
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD----~~~Di~aA~~aGi~~i~v~~G 203 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLFVGD----SRSDVLAAKAAGVQCVALSYG 203 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEEECC----CHHHHHHHHHCCCeEEEEecC
Confidence 4556667777777775 789999999 999999999999768887664
No 57
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.70 E-value=3.6e-08 Score=80.67 Aligned_cols=59 Identities=14% Similarity=-0.024 Sum_probs=42.5
Q ss_pred eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh---hHHHHhhhhcc
Q 038498 184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED---TMEKCKALFLA 246 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~---~~k~~A~~v~~ 246 (248)
.+.+-.+...++.+++ ++++++||| +.||+++.+.+|+.++++..... .....|+.+..
T Consensus 144 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD----s~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (222)
T PRK10826 144 LPYSKPHPEVYLNCAAKLGVDPLTCVALED----SFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE 210 (222)
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEEEcC----ChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc
Confidence 3444556667777775 789999999 99999999999987777776432 23344555543
No 58
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.68 E-value=1.6e-08 Score=82.74 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=33.8
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
-.+..+++.+++ ++++++||| +.||+++.+.+|+.+++|..
T Consensus 149 kp~~~~~~~~~~~~~~~~~~~i~igD----~~~Di~~a~~~g~~~i~v~~ 194 (226)
T PRK13222 149 KPDPAPLLLACEKLGLDPEEMLFVGD----SRNDIQAARAAGCPSVGVTY 194 (226)
T ss_pred CcChHHHHHHHHHcCCChhheEEECC----CHHHHHHHHHCCCcEEEECc
Confidence 345666777765 789999999 99999999999977888864
No 59
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.67 E-value=2.2e-08 Score=80.88 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 186 QGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 186 ~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
..-.|...++.+.+ ..+++++|| +.||++|++.+| .++++ +|.|.+++.|+.+.
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGD----s~nDl~ml~~Ag-~~ia~-~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGD----SYNDTTMLSEAH-AGILF-HAPENVIREFPQFP 183 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeC----CHHHHHHHHhCC-CCEEe-cCCHHHHHhCCCCC
Confidence 45689999998866 448999999 999999999999 88887 67888888887654
No 60
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.67 E-value=1.6e-08 Score=83.27 Aligned_cols=40 Identities=10% Similarity=0.006 Sum_probs=31.6
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.+...+.++++ ++++++||| +.||+.+.+.+|+.++++.-
T Consensus 152 P~p~~~~~~~~~l~~~p~~~l~IGD----s~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 152 PHPLPLLVAAERIGVAPTDCVYVGD----DERDILAARAAGMPSVAALW 196 (229)
T ss_pred CCHHHHHHHHHHhCCChhhEEEeCC----CHHHHHHHHHCCCcEEEEee
Confidence 34455555554 889999999 99999999999977777743
No 61
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.66 E-value=9.6e-08 Score=80.12 Aligned_cols=73 Identities=18% Similarity=0.271 Sum_probs=54.7
Q ss_pred ccceEEEEecCCCCCCCCCCC---CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecCCcEEEe
Q 038498 5 KQGLLALFDVDGTLTAPRKAA---TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i---~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~nGa~i~~ 78 (248)
...|+|+|||||||+++.+.+ ++.+.++|.+|+++ +.++++|+.+...+...+... +...++ +|.++|.....
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFD-vII~~g~i~~k 203 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFD-IIICGGRKAGE 203 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcccc-EEEECCCcccc
Confidence 457999999999999998887 89999999999999 999999977665544444431 223343 45666666554
No 62
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.64 E-value=2e-08 Score=82.19 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=53.5
Q ss_pred ccccccchHHHHHHHHHHcCCc-eEEEEecCceEEEEeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHh
Q 038498 148 YDKIHNIRPKMVSVLREKFAHL-NLTFSIGGQISFDVFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFE 221 (248)
Q Consensus 148 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~di~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~ 221 (248)
+..++++.+.....+.+.++-- -+....+ .+-.+..-.....+..+++ +++++++|| +.+|+.|.+
T Consensus 108 l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGD----s~~Di~aA~ 179 (220)
T COG0546 108 LGIVTNKPERELDILLKALGLADYFDVIVG----GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGD----SLNDILAAK 179 (220)
T ss_pred EEEEeCCcHHHHHHHHHHhCCccccceEEc----CCCCCCCCcCHHHHHHHHHHhCCChhheEEECC----CHHHHHHHH
Confidence 3445666667777777765410 0111111 1222333334455555554 458999999 999999999
Q ss_pred hCCCceEEccCc---hhhHHHH-hhhhccC
Q 038498 222 SERTVGHTVTSP---EDTMEKC-KALFLAK 247 (248)
Q Consensus 222 ~~g~~~~av~Na---~~~~k~~-A~~v~~~ 247 (248)
++|+.+++|..+ .+.+... ++++..+
T Consensus 180 ~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~ 209 (220)
T COG0546 180 AAGVPAVGVTWGYNSREELAQAGADVVIDS 209 (220)
T ss_pred HcCCCEEEEECCCCCCcchhhcCCCEEECC
Confidence 999666666653 2344443 6666544
No 63
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.60 E-value=2.9e-08 Score=80.41 Aligned_cols=55 Identities=9% Similarity=0.046 Sum_probs=38.7
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC---chhhHH-HHhhhhcc
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS---PEDTME-KCKALFLA 246 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N---a~~~~k-~~A~~v~~ 246 (248)
-.+...+..+++ ++++++||| +.+|+.+.+.+|+.+++|.. ..+.++ ..|+++..
T Consensus 141 Kp~p~~~~~~~~~~~~~~~~~~~igD----s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~ 204 (213)
T TIGR01449 141 KPHPDPLLLAAERLGVAPQQMVYVGD----SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD 204 (213)
T ss_pred CCChHHHHHHHHHcCCChhHeEEeCC----CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC
Confidence 344566666664 788999999 99999999999988887843 222333 34555544
No 64
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.58 E-value=6.6e-08 Score=81.64 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=39.9
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc---hhhHH-HHhhhhcc
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP---EDTME-KCKALFLA 246 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na---~~~~k-~~A~~v~~ 246 (248)
.|..++..+++ ++++++||| +.+|+.+.+.+|+.++++... .+++. ..|+++..
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~IGD----s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~ 258 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYVGD----ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE 258 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEECC----CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC
Confidence 46677777765 789999999 999999999999888877663 22333 23565554
No 65
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.56 E-value=3.4e-08 Score=82.42 Aligned_cols=30 Identities=13% Similarity=-0.107 Sum_probs=27.2
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| +.+|+...+.+|+.+++|..+
T Consensus 174 ~~~~l~IGD----s~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 174 VAACVKVGD----TVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred chheEEECC----cHHHHHHHHHCCCeEEEEecC
Confidence 678999999 999999999999888888764
No 66
>PRK11590 hypothetical protein; Provisional
Probab=98.54 E-value=1.2e-06 Score=71.15 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=38.2
Q ss_pred eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498 185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239 (248)
Q Consensus 185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~ 239 (248)
-.|-.|...++..+. ...+.|.|| |.||++||+.++ +.++| |+++.+++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~D----s~~D~pmL~~a~-~~~~v-np~~~l~~ 209 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSD----SKQDNPLLYFCQ-HRWRV-TPRGELQQ 209 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecC----CcccHHHHHhCC-CCEEE-CccHHhhc
Confidence 346678888887663 667889999 999999999999 99988 45555544
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.53 E-value=3.7e-07 Score=73.59 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=36.1
Q ss_pred eCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 185 PQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 185 ~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
+..-.|...++.+.. .+++++||| +.||++|.+.+| .+++++...
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGD----s~~D~~~~~aa~-~~v~~~~~~ 173 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGD----SYNDTTMLGEAD-AGILFRPPA 173 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeC----CHHHHHHHHhCC-CCEEECCCH
Confidence 334567788887765 789999999 999999999999 888875543
No 68
>PRK11587 putative phosphatase; Provisional
Probab=98.53 E-value=1.1e-07 Score=77.50 Aligned_cols=31 Identities=13% Similarity=-0.095 Sum_probs=28.5
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
++++++||| +.+|+...+.+|+.+++|.+..
T Consensus 155 p~~~l~igD----s~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 155 PQECVVVED----APAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred cccEEEEec----chhhhHHHHHCCCEEEEECCCC
Confidence 899999999 9999999999998889998754
No 69
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.49 E-value=1.3e-07 Score=78.83 Aligned_cols=29 Identities=10% Similarity=-0.044 Sum_probs=26.4
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
++++++||| +.+|+...+.+|+..+++..
T Consensus 181 ~~~~l~vgD----s~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 181 KDHTFVFED----SVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred hhHEEEEcC----CHHHHHHHHHCCCEEEEEeC
Confidence 889999999 99999999999988888864
No 70
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.48 E-value=7.2e-08 Score=93.40 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=61.6
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
+...+.....+.++++ +.. .+.++.|. +|..+++.+.+ .++++++|| +.||++|++.+| .+++|
T Consensus 673 Tgd~~~~a~~ia~~lg---i~~-----~~~~~~p~--~K~~~i~~l~~~~~~v~~vGD----g~nD~~al~~Ag-vgia~ 737 (834)
T PRK10671 673 TGDNPTTANAIAKEAG---IDE-----VIAGVLPD--GKAEAIKRLQSQGRQVAMVGD----GINDAPALAQAD-VGIAM 737 (834)
T ss_pred cCCCHHHHHHHHHHcC---CCE-----EEeCCCHH--HHHHHHHHHhhcCCEEEEEeC----CHHHHHHHHhCC-eeEEe
Confidence 4455555566666654 211 12234454 69999999987 678999999 999999999999 99999
Q ss_pred cCchhhHHHHhhhhc
Q 038498 231 TSPEDTMEKCKALFL 245 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~ 245 (248)
+|+++..++.|+.++
T Consensus 738 g~g~~~a~~~ad~vl 752 (834)
T PRK10671 738 GGGSDVAIETAAITL 752 (834)
T ss_pred cCCCHHHHHhCCEEE
Confidence 999999999999887
No 71
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.47 E-value=1.3e-07 Score=79.36 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=31.0
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
+.......++ ++++++||| +.+|+...+.+|+..+++.+
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgD----s~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGN----SNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcC----CHHHHHHHHHcCCEEEEEec
Confidence 3444555553 889999999 99999999999977778764
No 72
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.47 E-value=2.3e-07 Score=75.64 Aligned_cols=41 Identities=15% Similarity=0.001 Sum_probs=31.4
Q ss_pred CHHHHHHHhhc------cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEccCc
Q 038498 189 DKTYCLRYLDD------FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVTSP 233 (248)
Q Consensus 189 ~K~~al~~l~~------~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~Na 233 (248)
.+...+..+++ ++++++||| +.+|+.+.+.+|+.+ +++...
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD----~~~Di~aa~~aG~~~~i~~~~g 193 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGD----TPNDLEAGINAGAGAVVGVLTG 193 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCC----CHHHHHHHHHCCCCeEEEEecC
Confidence 45566666654 478999999 999999999999665 566543
No 73
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.46 E-value=1e-07 Score=80.22 Aligned_cols=30 Identities=10% Similarity=-0.248 Sum_probs=26.9
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| +.+|+.+.+.+|+.+++|..+
T Consensus 176 ~~e~l~IGD----s~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 176 VAACVKVDD----TVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred CcceEEEcC----cHHHHHHHHHCCCEEEEEccC
Confidence 478999999 999999999999888888764
No 74
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.35 E-value=3.3e-06 Score=67.58 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=38.5
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhh
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKA 242 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~ 242 (248)
.+|+.+++.+++ ++++++||| +.||++|++.+| ..+++.. .+.++.+|.
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGD----s~~D~~~a~~ag-~~~a~~~-~~~~~~~a~ 199 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGD----SKNDLPMFEVAD-ISISLGD-EGHADYLAK 199 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcC----CHhHHHHHHhcC-CeEEECC-Cccchhhcc
Confidence 468888888875 678999999 999999999999 8887754 344455554
No 75
>PLN02954 phosphoserine phosphatase
Probab=98.33 E-value=1.7e-06 Score=70.74 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEE--ccCc--hhhHHHHhhhhccC
Q 038498 186 QGWDKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHT--VTSP--EDTMEKCKALFLAK 247 (248)
Q Consensus 186 ~~~~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a--v~Na--~~~~k~~A~~v~~~ 247 (248)
.+.+|..+++.+++ .+++++||| +.||+.|.+.+| ..+. .+.. .+.....|+++..+
T Consensus 152 ~~~~K~~~i~~~~~~~~~~~~i~iGD----s~~Di~aa~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 215 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGYKTMVMIGD----GATDLEARKPGG-ADLFIGYGGVQVREAVAAKADWFVTD 215 (224)
T ss_pred CCccHHHHHHHHHHHcCCCceEEEeC----CHHHHHhhhcCC-CCEEEecCCCccCHHHHhcCCEEECC
Confidence 45679999998886 578999999 999999988866 4433 3432 23345556666543
No 76
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.33 E-value=3.6e-07 Score=80.09 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=33.3
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
.+.......++ ++++++||| +.+|+...+.+|+..++|.+..
T Consensus 273 P~Peifl~A~~~lgl~Peecl~IGD----S~~DIeAAk~AGm~~IgV~~~~ 319 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIVFGN----SNQTVEAAHDARMKCVAVASKH 319 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcC----CHHHHHHHHHcCCEEEEECCCC
Confidence 34444444443 889999999 9999999999999999998754
No 77
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.30 E-value=7.2e-07 Score=75.92 Aligned_cols=41 Identities=5% Similarity=-0.125 Sum_probs=32.5
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
.+...+..+++ ++++++||| +.+|+.+.+.+|+..++|.+.
T Consensus 203 P~p~~~~~a~~~~~~~p~~~l~IGD----s~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 203 PDPDIYNLAAETLGVDPSRCVVVED----SVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred CCHHHHHHHHHHhCcChHHEEEEeC----CHHhHHHHHHcCCEEEEEccC
Confidence 33445555554 789999999 999999999999888888664
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.26 E-value=6.6e-07 Score=70.25 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=31.2
Q ss_pred eeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhC
Q 038498 184 FPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESE 223 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~ 223 (248)
.+.+.+|...++.+++ ++++++||| +.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGD----s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGD----SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeC----CHHHHHHHhcC
Confidence 4678899999999875 668999999 99999999854
No 79
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.24 E-value=1.5e-06 Score=70.75 Aligned_cols=41 Identities=10% Similarity=-0.104 Sum_probs=32.4
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~ 234 (248)
+....+.+++ ++++++||| +. +|+...+.+|+.++++....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD----s~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMVGD----RLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEECC----ChHHHHHHHHHCCCEEEEECCCC
Confidence 3445555554 789999999 98 99999999998888887644
No 80
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.22 E-value=5.7e-07 Score=71.43 Aligned_cols=41 Identities=7% Similarity=-0.104 Sum_probs=32.3
Q ss_pred CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
.-.+...+.+.++ ++++++||| +.+|+...+.+|+.+++|.
T Consensus 141 ~KP~p~~~~~~~~~~~~~~~~~l~igD----s~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 141 HKPAPDTFLRCAQLMGVQPTQCVVFED----ADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEec----cHhhHHHHHHCCCEEEeec
Confidence 3445555666654 788999999 9999999999997777764
No 81
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.21 E-value=8.6e-07 Score=80.40 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=32.5
Q ss_pred CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.|...+...++ ++++++||| +.+|+.+.+.+|+..+++..
T Consensus 386 ~kP~~~~~al~~l~~~~~v~VGD----s~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 386 NKSDLVKSILNKYDIKEAAVVGD----RLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred CCcHHHHHHHHhcCcceEEEEeC----CHHHHHHHHHCCCeEEEEeC
Confidence 35555666554 889999999 99999999999977888755
No 82
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.21 E-value=1.3e-06 Score=73.09 Aligned_cols=53 Identities=26% Similarity=0.327 Sum_probs=43.9
Q ss_pred ceEEEEecCCCCCCCCCC---CCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc
Q 038498 7 GLLALFDVDGTLTAPRKA---ATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK 59 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~---i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~ 59 (248)
+|+|+||+||||++.+.+ +.+.+.++|++|+++ ++++++|||+.. .+.+.+..
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~ 60 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR 60 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 479999999999988662 788999999999999 999999998765 35555543
No 83
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.17 E-value=2.6e-05 Score=63.61 Aligned_cols=37 Identities=22% Similarity=0.090 Sum_probs=32.2
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
..|..+++.+.. ++++++||| +.||+.+.+.+| ..++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGD----s~~Di~aa~~Ag-~~~a 184 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGD----SITDLEAAKQAD-KVFA 184 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeC----CHHHHHHHHHCC-ccee
Confidence 458999998875 789999999 999999999999 7555
No 84
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.17 E-value=1.1e-06 Score=69.54 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=28.5
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
+...++.+++ ++++++||| +.+|+.+.+.+|..+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD----~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFED----ALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeC----cHhhHHHHHHCCCeEeeC
Confidence 3344455553 789999999 999999999999666654
No 85
>PRK10444 UMP phosphatase; Provisional
Probab=98.16 E-value=2.1e-06 Score=71.54 Aligned_cols=52 Identities=15% Similarity=0.277 Sum_probs=44.4
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK 59 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~ 59 (248)
+|+++||+||||++.+ .+.+.+.++|++|+++ ..++++|+|+.. .+.+++..
T Consensus 1 ~~~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 1 IKNVICDIDGVLMHDN-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred CcEEEEeCCCceEeCC-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 5899999999999886 6788899999999999 999999999974 45555543
No 86
>PLN02645 phosphoglycolate phosphatase
Probab=98.15 E-value=3.4e-06 Score=72.64 Aligned_cols=53 Identities=17% Similarity=0.199 Sum_probs=43.7
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhc
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLG 58 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~ 58 (248)
.++++++||+||||+..+. +.+.+.++|++|+++ .+++++|+|+. ..+.+.+.
T Consensus 26 ~~~~~~~~D~DGtl~~~~~-~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~ 82 (311)
T PLN02645 26 DSVETFIFDCDGVIWKGDK-LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE 82 (311)
T ss_pred HhCCEEEEeCcCCeEeCCc-cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 3589999999999998765 457789999999999 99999999994 45554443
No 87
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.11 E-value=6.8e-06 Score=61.40 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=36.9
Q ss_pred eEEEEecCCCCCCCCC---C---------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 8 LLALFDVDGTLTAPRK---A---------ATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 8 kli~~DlDGTLl~~~~---~---------i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
|++++||||||++... . +-+.+.+.|+.|+++ ++++++|+++..
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~ 57 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDP 57 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCH
Confidence 6899999999998832 1 356889999999999 999999999433
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.08 E-value=3.4e-06 Score=68.05 Aligned_cols=56 Identities=13% Similarity=0.010 Sum_probs=38.1
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc----hhhHHHHhhhhccC
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP----EDTMEKCKALFLAK 247 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na----~~~~k~~A~~v~~~ 247 (248)
-.+...+..+++ ++++++||| +.+|+.+.+.+|+.++++... .+-.+.-|+++..+
T Consensus 131 KP~~~~~~~~~~~~~~~~~~~l~igD----~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~ 195 (205)
T TIGR01454 131 KPAPDIVREALRLLDVPPEDAVMVGD----AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK 195 (205)
T ss_pred CCChHHHHHHHHHcCCChhheEEEcC----CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC
Confidence 334555566554 789999999 999999999999666666432 22234446666544
No 89
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.02 E-value=5.8e-06 Score=67.84 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=32.7
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCc-eEEccCchhh
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTV-GHTVTSPEDT 236 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~-~~av~Na~~~ 236 (248)
+......+++ ++++++||| +.+|+...+.+|+. .++|.++...
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igD----s~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDD----SEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcC----CHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 3555666554 889999999 99999999999953 4667776543
No 90
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.00 E-value=1.1e-05 Score=68.52 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=41.6
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhc
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLG 58 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~ 58 (248)
.+++|+||+||||++.+..++ .+.++|++|+++ +.++++|+|+. ..+...+.
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~-ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~ 56 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVP-GAPELLDRLARAGKAALFVTNNSTKSRAEYALKFA 56 (279)
T ss_pred CccEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 368999999999998766554 489999999999 99999999874 34444443
No 91
>PLN02940 riboflavin kinase
Probab=98.00 E-value=4.1e-06 Score=74.13 Aligned_cols=43 Identities=7% Similarity=-0.230 Sum_probs=33.9
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
-.+.......++ ++++++||| +.+|+...+.+|+..++|....
T Consensus 150 KP~p~~~~~a~~~lgv~p~~~l~VGD----s~~Di~aA~~aGi~~I~v~~g~ 197 (382)
T PLN02940 150 KPSPDIFLEAAKRLNVEPSNCLVIED----SLPGVMAGKAAGMEVIAVPSIP 197 (382)
T ss_pred CCCHHHHHHHHHHcCCChhHEEEEeC----CHHHHHHHHHcCCEEEEECCCC
Confidence 334455555554 889999999 9999999999998888887643
No 92
>PRK08238 hypothetical protein; Validated
Probab=97.96 E-value=2.6e-05 Score=70.87 Aligned_cols=78 Identities=10% Similarity=0.146 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 155 RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 155 ~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
.+...+.+.++++-...... +.... ..++..|...++.....+++.++|| +.||++|++.+| .+++|+...
T Consensus 98 ~~~~a~~i~~~lGlFd~Vig--sd~~~--~~kg~~K~~~l~~~l~~~~~~yvGD----S~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 98 DERLAQAVAAHLGLFDGVFA--SDGTT--NLKGAAKAAALVEAFGERGFDYAGN----SAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred CHHHHHHHHHHcCCCCEEEe--CCCcc--ccCCchHHHHHHHHhCccCeeEecC----CHHHHHHHHhCC-CeEEECCCH
Confidence 33445556666542223333 12111 2334568777776555556889999 999999999999 999886654
Q ss_pred hhHHHHhh
Q 038498 235 DTMEKCKA 242 (248)
Q Consensus 235 ~~~k~~A~ 242 (248)
. +++.|+
T Consensus 169 ~-l~~~a~ 175 (479)
T PRK08238 169 G-VARAAR 175 (479)
T ss_pred H-HHHHHH
Confidence 4 666665
No 93
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.95 E-value=0.0002 Score=58.18 Aligned_cols=40 Identities=20% Similarity=0.166 Sum_probs=33.6
Q ss_pred CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
|..|..+++.+.. .+++++||| +.||+.|++.+| ..++-.
T Consensus 142 g~~K~~~l~~~~~~~~~~i~iGD----g~~D~~~a~~Ad-~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLSEPNDYHIVIGD----SVTDVEAAKQSD-LCFARD 182 (214)
T ss_pred CCCHHHHHHHHhhcCCcEEEEeC----CHHHHHHHHhCC-eeEehH
Confidence 3468999998775 778999999 999999999998 766644
No 94
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.94 E-value=2.4e-05 Score=61.18 Aligned_cols=46 Identities=26% Similarity=0.377 Sum_probs=37.4
Q ss_pred ccceEEEEecCCCCCCCCCCC------------CHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498 5 KQGLLALFDVDGTLTAPRKAA------------TPQMLEFMRELRKV-VTVGVVGGSDL 50 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i------------~~~~~~al~~l~~~-~~v~iaTGR~~ 50 (248)
++.|+++||+||||+.+.+.. -+.+.++|++|+++ +.++++|..+.
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 456899999999999865422 26689999999999 99999996553
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.94 E-value=4.7e-05 Score=61.83 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=37.0
Q ss_pred eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHH
Q 038498 185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTME 238 (248)
Q Consensus 185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k 238 (248)
-.|-.|-..++..+. ...+.|.|| |.||++||+.++ +.++| |+++.++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsD----S~~D~pmL~~a~-~~~~V-np~~~L~ 207 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSD----SKQDNPLLAFCE-HRWRV-SKRGELQ 207 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecC----CcccHHHHHhCC-CcEEE-CcchHhc
Confidence 345678888887763 567889999 999999999999 99988 4444443
No 96
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.93 E-value=1.6e-05 Score=59.40 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=36.4
Q ss_pred eEEEEecCCCCCCCC--------CCCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 8 LLALFDVDGTLTAPR--------KAATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 8 kli~~DlDGTLl~~~--------~~i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
|+++||+||||++.. ..+.+.+.++|+.|+++ ++++++|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 689999999999631 24577889999999999 9999999998
No 97
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.81 E-value=2e-05 Score=64.15 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=29.0
Q ss_pred HHHHHh-h-ccCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccC
Q 038498 192 YCLRYL-D-DFNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTS 232 (248)
Q Consensus 192 ~al~~l-~-~~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~N 232 (248)
.+++.+ . +++++++||| +. +|+...+.+|+.++.+..
T Consensus 160 ~~~~~~~~~~~~~~v~igD----~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 160 YALERMPKFSKEEVLMIGD----SLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHHHhcCCCchheEEECC----CcHHHHHHHHHCCCcEEEECC
Confidence 445555 2 3889999999 98 899999999976777654
No 98
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.74 E-value=1.6e-05 Score=62.80 Aligned_cols=40 Identities=10% Similarity=-0.081 Sum_probs=31.9
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
-.+....+..++ ++++++||| +.+|+...+.+|+.+++|+
T Consensus 141 kp~p~~~~~~~~~~~~~~~~~v~vgD----~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 KPDPEIFLAAAEGLGVSPSECIGIED----AQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEec----CHHHHHHHHHcCCEEEecC
Confidence 445556566654 788999999 9999999999998777764
No 99
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.72 E-value=9.5e-05 Score=61.03 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=35.1
Q ss_pred cceEEEEecCCCCCCCCC------C-CCHH---------------------------HHHHHHHHhhc-CeEEEEcCCC
Q 038498 6 QGLLALFDVDGTLTAPRK------A-ATPQ---------------------------MLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~------~-i~~~---------------------------~~~al~~l~~~-~~v~iaTGR~ 49 (248)
+..+|+|||||||+++.. . .+++ ..+.|+.++++ ++++++|+|.
T Consensus 62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence 345999999999998865 1 2331 67888999999 9999999993
No 100
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.70 E-value=0.0001 Score=59.18 Aligned_cols=32 Identities=16% Similarity=-0.018 Sum_probs=25.0
Q ss_pred HHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCce
Q 038498 192 YCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVG 227 (248)
Q Consensus 192 ~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~ 227 (248)
...+++++ ++++++||| +. +|+...+.+|+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD----~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGD----SLRNDYQGARAAGWRA 201 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECC----CchHHHHHHHHcCCee
Confidence 34555553 889999999 97 8999999999443
No 101
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.65 E-value=8.3e-05 Score=61.48 Aligned_cols=63 Identities=24% Similarity=0.253 Sum_probs=47.3
Q ss_pred EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc---CCChHHHHHHhccc--ccCCCceEEecCC
Q 038498 10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG---GSDLSKISEQLGKT--VIDEYDYVFSENG 73 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT---GR~~~~~~~~l~~~--~~~~~~~~i~~nG 73 (248)
++||+||||++....++ .+.++|+.++++ ..+.+.| ||+..++.+.+... +...++-++.+..
T Consensus 1 ~lfD~DGvL~~~~~~~~-~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~ 69 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIP-GAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS 69 (236)
T ss_pred CEEeCcCccCcCCccCc-CHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH
Confidence 58999999999876655 889999999999 9999998 89988777666541 2233445555444
No 102
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.65 E-value=6.6e-05 Score=60.07 Aligned_cols=43 Identities=9% Similarity=-0.003 Sum_probs=34.1
Q ss_pred CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhC--CCceEEccCchh
Q 038498 189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESE--RTVGHTVTSPED 235 (248)
Q Consensus 189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~--g~~~~av~Na~~ 235 (248)
.|...+..+++ ++++++||| +.+|+...+.+ |+..++|..+..
T Consensus 131 ~kp~~~~~a~~~~~~~~~v~vgD----s~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 131 SKEKLFIKAKEKYGDRVVCFVDD----LAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred ccHHHHHHHHHHhCCCcEEEeCC----CHHHHHHHHHHHcCCcEEEecchhh
Confidence 35666666655 568999999 99999999998 988888876654
No 103
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.57 E-value=9e-05 Score=56.61 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=35.0
Q ss_pred eEEEEecCCCCCCCCC----------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 8 LLALFDVDGTLTAPRK----------AATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 8 kli~~DlDGTLl~~~~----------~i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
++++||+||||++... .+-+.+.++|+.|+++ ++++++|..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 5789999999998864 2366778999999999 9999999864
No 104
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.54 E-value=9.1e-05 Score=72.69 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=47.8
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 246 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~ 246 (248)
-+|...++.+.+ .+.+.++|| +.||.+|++.|+ .|++|+++++.+|+.|++|+.
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGD----G~ND~~alk~Ad-VGia~g~g~~~ak~aAD~vl~ 671 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGD----GVNDAPALKKAD-IGIAMGSGTEVAKEASDMVLA 671 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecC----CcchHHHHHhCC-eeEECCCCcHHHHHhcCeEEc
Confidence 468888888876 556777999 999999999999 999999999999999999884
No 105
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.50 E-value=0.0003 Score=55.16 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=41.5
Q ss_pred ccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498 5 KQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDL 50 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~ 50 (248)
..++++++|+||||+..+. .+.+.+.++|+.|+++ ++++++|+.+.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~ 70 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAG 70 (170)
T ss_pred CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCch
Confidence 5789999999999998766 6888999999999999 99999999873
No 106
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.49 E-value=0.00021 Score=57.19 Aligned_cols=39 Identities=10% Similarity=-0.087 Sum_probs=31.0
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
+....+.+++ ++++++||| +.+|+...+.+|+.++.+..
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~vgD----~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLFVAS----NPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEEEeC----CHHHHHHHHHCCCcEEEecC
Confidence 3444555543 889999999 99999999999977777754
No 107
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.47 E-value=0.00019 Score=54.91 Aligned_cols=33 Identities=18% Similarity=0.009 Sum_probs=26.4
Q ss_pred CCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498 187 GWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESER 224 (248)
Q Consensus 187 ~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g 224 (248)
.-.+...+.++++ + ++++||| +.+|+.+.+.+|
T Consensus 117 ~Kp~~~~~~~~~~~~~~~~-~~l~iGD----s~~Di~aa~~aG 154 (154)
T TIGR01549 117 AKPEPEIFLAALESLGLPP-EVLHVGD----NLNDIEGARNAG 154 (154)
T ss_pred CCcCHHHHHHHHHHcCCCC-CEEEEeC----CHHHHHHHHHcc
Confidence 3445677777775 6 9999999 999999998775
No 108
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.44 E-value=0.00033 Score=58.08 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=38.9
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
+++++++||+||||.+.. .+.+.+.++|++|+++ ++++++|..+..
T Consensus 6 ~~~~~~~~D~dG~l~~~~-~~~pga~e~L~~L~~~G~~~~ivTN~~~~ 52 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGN-HTYPGAVQNLNKIIAQGKPVYFVSNSPRN 52 (242)
T ss_pred hcCCEEEEecccccccCC-ccCccHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 467899999999999774 4578899999999999 999998776543
No 109
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.43 E-value=0.00013 Score=72.58 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=32.2
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
+.......++ ++++++||| +.+|+...+.+|+..++|...
T Consensus 220 ~Pe~~~~a~~~lgv~p~e~v~IgD----s~~Di~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 220 APDIFLAAAKILGVPTSECVVIED----ALAGVQAARAAGMRCIAVTTT 264 (1057)
T ss_pred CHHHHHHHHHHcCcCcccEEEEcC----CHHHHHHHHHcCCEEEEECCC
Confidence 3444444443 889999999 999999999999888888764
No 110
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.41 E-value=0.00016 Score=68.09 Aligned_cols=53 Identities=21% Similarity=0.226 Sum_probs=49.6
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
-+|...++.+++ .+.++++|| +.||.++|+.++ .|+||+++++..|++|+.|+
T Consensus 495 edK~~~v~~lq~~g~~VamvGD----G~NDapAL~~Ad-vGiAm~~gt~~akeaadivL 548 (675)
T TIGR01497 495 EDKIALIRQEQAEGKLVAMTGD----GTNDAPALAQAD-VGVAMNSGTQAAKEAANMVD 548 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECC----CcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEE
Confidence 579999999987 557999999 999999999999 99999999999999999986
No 111
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.37 E-value=0.00019 Score=68.90 Aligned_cols=80 Identities=19% Similarity=0.359 Sum_probs=64.5
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
.++..+.....+.++++ +.+. .+..|. +|...++.+.+.+.++++|| +.||.++++.++ .|++|
T Consensus 590 lTGd~~~~a~~ia~~lg---i~~~------~~~~p~--~K~~~v~~l~~~~~v~mvGD----giNDapAl~~A~-vgia~ 653 (741)
T PRK11033 590 LTGDNPRAAAAIAGELG---IDFR------AGLLPE--DKVKAVTELNQHAPLAMVGD----GINDAPAMKAAS-IGIAM 653 (741)
T ss_pred EcCCCHHHHHHHHHHcC---CCee------cCCCHH--HHHHHHHHHhcCCCEEEEEC----CHHhHHHHHhCC-eeEEe
Confidence 34556667777777765 2222 224454 89999999987778999999 999999999999 99999
Q ss_pred cCchhhHHHHhhhhcc
Q 038498 231 TSPEDTMEKCKALFLA 246 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~~ 246 (248)
+++++..++.|+.++-
T Consensus 654 g~~~~~a~~~adivl~ 669 (741)
T PRK11033 654 GSGTDVALETADAALT 669 (741)
T ss_pred cCCCHHHHHhCCEEEe
Confidence 9999999999998873
No 112
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.34 E-value=0.00026 Score=65.94 Aligned_cols=80 Identities=19% Similarity=0.295 Sum_probs=61.9
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
+++..+.....+.++++ +.+. .++.| -+|...++.+.+ .++++++|| +.||.++++.+| .+++
T Consensus 427 lSgd~~~~a~~ia~~lg---i~~~------~~~~p--~~K~~~v~~l~~~~~~v~~VGD----g~nD~~al~~A~-vgia 490 (562)
T TIGR01511 427 LTGDNRKTAKAVAKELG---INVR------AEVLP--DDKAALIKELQEKGRVVAMVGD----GINDAPALAQAD-VGIA 490 (562)
T ss_pred EcCCCHHHHHHHHHHcC---CcEE------ccCCh--HHHHHHHHHHHHcCCEEEEEeC----CCccHHHHhhCC-EEEE
Confidence 34455566666666654 2111 12334 489999999886 778999999 999999999999 9999
Q ss_pred ccCchhhHHHHhhhhcc
Q 038498 230 VTSPEDTMEKCKALFLA 246 (248)
Q Consensus 230 v~Na~~~~k~~A~~v~~ 246 (248)
|+++.+..++.|++++.
T Consensus 491 ~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 491 IGAGTDVAIEAADVVLM 507 (562)
T ss_pred eCCcCHHHHhhCCEEEe
Confidence 99999999999998874
No 113
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.32 E-value=0.00092 Score=51.39 Aligned_cols=56 Identities=25% Similarity=0.351 Sum_probs=47.4
Q ss_pred cccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 4 RKQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
+..+|.+++|+|.||++.+. ..+++.++=+.+++.+ ++++++|-.+...+....+.
T Consensus 25 ~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 35789999999999999876 4899999999999999 99999998877665544443
No 114
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.28 E-value=0.00023 Score=50.78 Aligned_cols=49 Identities=27% Similarity=0.388 Sum_probs=37.1
Q ss_pred EEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCC---hHHHHHHhcc
Q 038498 10 ALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSD---LSKISEQLGK 59 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~---~~~~~~~l~~ 59 (248)
++||+||||...+. .-+...++|++|+++ .++++.|-.+ ..++.+.|..
T Consensus 1 ~l~D~dGvl~~g~~-~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE-PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEETTE-E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEeCCC-cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 68999999998644 566679999999999 9999988665 3456666654
No 115
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.28 E-value=0.00026 Score=65.80 Aligned_cols=82 Identities=16% Similarity=0.239 Sum_probs=63.3
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
+++........+.++++ +... +-++.| -+|...++.+.+ .++++++|| +.||+++++.+| .+++
T Consensus 407 vTgd~~~~a~~i~~~lg---i~~~-----f~~~~p--~~K~~~v~~l~~~~~~v~~vGD----g~nD~~al~~A~-vgia 471 (556)
T TIGR01525 407 LTGDNRSAAEAVAAELG---IDEV-----HAELLP--EDKLAIVKELQEEGGVVAMVGD----GINDAPALAAAD-VGIA 471 (556)
T ss_pred EeCCCHHHHHHHHHHhC---CCee-----eccCCH--HHHHHHHHHHHHcCCEEEEEEC----ChhHHHHHhhCC-EeEE
Confidence 45566666677777765 2111 112334 488999999986 778999999 999999999999 9999
Q ss_pred ccCchhhHHHHhhhhccC
Q 038498 230 VTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 230 v~Na~~~~k~~A~~v~~~ 247 (248)
++++.+..++.|+++..+
T Consensus 472 ~g~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 472 MGAGSDVAIEAADIVLLN 489 (556)
T ss_pred eCCCCHHHHHhCCEEEeC
Confidence 999999999999998753
No 116
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.23 E-value=0.00054 Score=54.13 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=34.8
Q ss_pred ccceEEEEecCCCCCCCCCC---------CCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 5 KQGLLALFDVDGTLTAPRKA---------ATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~---------i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
+..|+++||.||||...... +-+.+.+.|++|+++ ++++++|..+
T Consensus 1 ~~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 1 KSMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred CCccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 35799999999998765421 245568899999888 8889888764
No 117
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.23 E-value=0.00028 Score=55.54 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=34.5
Q ss_pred eEEEEecCCCCCCCCC--------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 8 LLALFDVDGTLTAPRK--------AATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 8 kli~~DlDGTLl~~~~--------~i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
|++|+|.||||+...+ .+-+.+.++|++|+++ ++++++|..+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 7999999999995422 2356789999999999 9999999775
No 118
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.21 E-value=0.00032 Score=54.42 Aligned_cols=39 Identities=36% Similarity=0.550 Sum_probs=30.1
Q ss_pred eEEEEecCCCCCCCCC-----------C-CCHHHHHHHHHHhhc-CeEEEEc
Q 038498 8 LLALFDVDGTLTAPRK-----------A-ATPQMLEFMRELRKV-VTVGVVG 46 (248)
Q Consensus 8 kli~~DlDGTLl~~~~-----------~-i~~~~~~al~~l~~~-~~v~iaT 46 (248)
|+++||+||||+.+.+ . +.+.+.++|++|.+. +.++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 6899999999996532 1 355789999999999 9999998
No 119
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.20 E-value=0.00035 Score=64.68 Aligned_cols=80 Identities=19% Similarity=0.320 Sum_probs=61.9
Q ss_pred cccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 151 IHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
+++..+.....+.++++ +.. .+-++.| -+|...++.+.+ .++++++|| +.||+++++.+| .+++
T Consensus 385 vTgd~~~~a~~i~~~lg---i~~-----~f~~~~p--~~K~~~i~~l~~~~~~v~~vGD----g~nD~~al~~A~-vgia 449 (536)
T TIGR01512 385 LTGDRRAVAERVARELG---IDE-----VHAELLP--EDKLEIVKELREKYGPVAMVGD----GINDAPALAAAD-VGIA 449 (536)
T ss_pred EcCCCHHHHHHHHHHcC---Chh-----hhhccCc--HHHHHHHHHHHhcCCEEEEEeC----CHHHHHHHHhCC-EEEE
Confidence 35556666667777764 111 1112334 489999999987 778999999 999999999999 9999
Q ss_pred cc-CchhhHHHHhhhhc
Q 038498 230 VT-SPEDTMEKCKALFL 245 (248)
Q Consensus 230 v~-Na~~~~k~~A~~v~ 245 (248)
++ ++++..+..|+.++
T Consensus 450 ~g~~~~~~~~~~ad~vl 466 (536)
T TIGR01512 450 MGASGSDVAIETADVVL 466 (536)
T ss_pred eCCCccHHHHHhCCEEE
Confidence 99 78999999999887
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.17 E-value=0.0012 Score=56.41 Aligned_cols=53 Identities=23% Similarity=0.342 Sum_probs=43.2
Q ss_pred cceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 6 QGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+++++|+||||....+ .+.+.+.++|++|+++ +.++++|||+.......+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 468999999999997432 4678899999999999 9999999999765444433
No 121
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.13 E-value=0.00094 Score=52.04 Aligned_cols=45 Identities=33% Similarity=0.455 Sum_probs=35.8
Q ss_pred ccccceEEEEecCCCCCCCC-CCCCHHHHHHHHHHhhc-C--eEEEEcC
Q 038498 3 ARKQGLLALFDVDGTLTAPR-KAATPQMLEFMRELRKV-V--TVGVVGG 47 (248)
Q Consensus 3 ~~~~~kli~~DlDGTLl~~~-~~i~~~~~~al~~l~~~-~--~v~iaTG 47 (248)
.+..+|+++||+|+||+.+. ..++++..+.++++++. . .++|+|-
T Consensus 37 k~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSN 85 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSN 85 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 35689999999999999765 46999999999999876 3 3555554
No 122
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.12 E-value=0.0012 Score=51.92 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=38.9
Q ss_pred ceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCC-ChHHHHHHhc
Q 038498 7 GLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGS-DLSKISEQLG 58 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR-~~~~~~~~l~ 58 (248)
+|+++||+|+||-++. -.+-+.+.+.|+.|+++ ++++++|++ +...+...+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 5899999999998631 01245779999999999 999999988 5544443333
No 123
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=97.11 E-value=0.011 Score=48.60 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=31.5
Q ss_pred EEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCHHHHhh
Q 038498 181 FDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 181 ~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
-...|.+.-|+..|+.+.+ ..+++++|| |.||+-....
T Consensus 142 C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGD----G~nD~Cp~~~ 187 (234)
T PF06888_consen 142 CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGD----GRNDFCPALR 187 (234)
T ss_pred CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECC----CCCCcCcccc
Confidence 3466788899999999986 368999999 9999977654
No 124
>PTZ00445 p36-lilke protein; Provisional
Probab=97.11 E-value=0.00058 Score=54.76 Aligned_cols=45 Identities=20% Similarity=0.136 Sum_probs=37.8
Q ss_pred cccceEEEEecCCCCCC-----CCCC----------CCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498 4 RKQGLLALFDVDGTLTA-----PRKA----------ATPQMLEFMRELRKV-VTVGVVGGS 48 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~-----~~~~----------i~~~~~~al~~l~~~-~~v~iaTGR 48 (248)
+.++|+|++|+|.||+. .... ++++....+.+|.+. +.|+++|=.
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfS 100 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFS 100 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence 36799999999999998 3222 688899999999999 999999944
No 125
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.07 E-value=0.0019 Score=52.84 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=42.8
Q ss_pred ccceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCChHH---HH
Q 038498 5 KQGLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDLSK---IS 54 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~---~~ 54 (248)
.+.-+++||+|.|+|.+. ....+.++++++.++++ +.|+++|||+... ..
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 466899999999999732 12356789999999999 9999999999654 44
Q ss_pred HHhcc
Q 038498 55 EQLGK 59 (248)
Q Consensus 55 ~~l~~ 59 (248)
+.|..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55544
No 126
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.07 E-value=0.00062 Score=66.50 Aligned_cols=53 Identities=25% Similarity=0.413 Sum_probs=48.9
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
-+|..-++.+.+ -+.|.++|| +-||.++|+.|+ .|+||+++++..|++||.|+
T Consensus 589 e~K~~iV~~lq~~G~vVam~GD----GvNDapALk~Ad-VGIAmg~gtdvAk~aADiVL 642 (867)
T TIGR01524 589 MQKSRIIGLLKKAGHTVGFLGD----GINDAPALRKAD-VGISVDTAADIAKEASDIIL 642 (867)
T ss_pred HHHHHHHHHHHhCCCEEEEECC----CcccHHHHHhCC-EEEEeCCccHHHHHhCCEEE
Confidence 689999999887 446899999 999999999999 99999999999999999987
No 127
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.06 E-value=0.00065 Score=51.64 Aligned_cols=56 Identities=25% Similarity=0.288 Sum_probs=42.3
Q ss_pred cccceEEEEecCCCCCCCC------C----CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 4 RKQGLLALFDVDGTLTAPR------K----AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~------~----~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
.+++|++++|+||||++-. + .+....=..|+.|.+. +++.|.|||.-+.+.+....
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~ 71 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAKD 71 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHH
Confidence 4689999999999999742 1 2333445677888888 99999999987766665554
No 128
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.06 E-value=0.00059 Score=67.84 Aligned_cols=54 Identities=20% Similarity=0.235 Sum_probs=48.4
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA 246 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~ 246 (248)
-+|..-++.+.+ -+.+.++|| +.||.+|++.|+ .|+||+ ++.+..|++|++|+.
T Consensus 732 ~~K~~iV~~lq~~g~~Vam~GD----GvNDapaLk~Ad-VGIAmg~~gt~vak~aADivl~ 787 (1053)
T TIGR01523 732 QTKVKMIEALHRRKAFCAMTGD----GVNDSPSLKMAN-VGIAMGINGSDVAKDASDIVLS 787 (1053)
T ss_pred HHHHHHHHHHHhcCCeeEEeCC----CcchHHHHHhCC-ccEecCCCccHHHHHhcCEEEe
Confidence 578888888887 556999999 999999999999 999998 799999999999874
No 129
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.05 E-value=0.0012 Score=50.75 Aligned_cols=43 Identities=19% Similarity=0.326 Sum_probs=35.5
Q ss_pred EEEEecCCCCCCCCC--C---------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 9 LALFDVDGTLTAPRK--A---------ATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 9 li~~DlDGTLl~~~~--~---------i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
.|++|+||||+.++- . .-+.+.+..+.+.++ ++++..|+|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~ 55 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIG 55 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHH
Confidence 389999999998851 1 235568899999999 999999999975
No 130
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.02 E-value=0.0063 Score=60.87 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=47.1
Q ss_pred EeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 183 VFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 183 i~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
+.| -.|..-++.|.+ -.-|.++|| +.||.++|+.|. .|+||+++ ++..+|++++..
T Consensus 785 ~sP--~qK~~iV~~lq~~g~~V~m~GD----G~ND~~ALK~Ad-VGIam~~~--das~AA~f~l~~ 841 (1054)
T TIGR01657 785 MAP--DQKETLVELLQKLDYTVGMCGD----GANDCGALKQAD-VGISLSEA--EASVAAPFTSKL 841 (1054)
T ss_pred cCH--HHHHHHHHHHHhCCCeEEEEeC----ChHHHHHHHhcC-cceeeccc--cceeecccccCC
Confidence 555 689999999988 556999999 999999999998 99999987 355678877643
No 131
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.01 E-value=0.0027 Score=53.07 Aligned_cols=66 Identities=21% Similarity=0.279 Sum_probs=46.9
Q ss_pred ccceEEEEecCCCCCCCCCC--C-CHHHHHHHHHHhhc--CeEEEEcCCChH--HHHHHhcccccCCCceEEecC
Q 038498 5 KQGLLALFDVDGTLTAPRKA--A-TPQMLEFMRELRKV--VTVGVVGGSDLS--KISEQLGKTVIDEYDYVFSEN 72 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~--i-~~~~~~al~~l~~~--~~v~iaTGR~~~--~~~~~l~~~~~~~~~~~i~~n 72 (248)
.....|+||||.||+.+... | .+.+.+.|.+|++. +.+.+..|-.-- .-.+.++. ...|+.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L--~~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKL--EGYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCC--ccccEEEEeCC
Confidence 35679999999999988654 3 67889999999999 677777776532 33444443 34577666543
No 132
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.99 E-value=0.0013 Score=54.26 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=20.9
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.+.+++||| +.+|+...+.+|..++.|.-
T Consensus 184 ~~i~I~IGD----s~~Di~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 184 KNIRIFYGD----SDNDITAAREAGARGIRILR 212 (237)
T ss_pred cCCeEEEcC----CHHHHHHHHHcCCcEEEEec
Confidence 334778888 88888888888866666544
No 133
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.98 E-value=0.0022 Score=58.96 Aligned_cols=46 Identities=24% Similarity=0.349 Sum_probs=37.5
Q ss_pred ccceEEEEecCCCCCCCCC-----------C-CCHHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498 5 KQGLLALFDVDGTLTAPRK-----------A-ATPQMLEFMRELRKV-VTVGVVGGSDL 50 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~-----------~-i~~~~~~al~~l~~~-~~v~iaTGR~~ 50 (248)
.+.|+++||+||||+.+.+ . +-+.+.++|++|+++ +.++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 4579999999999997532 1 356789999999999 99999997554
No 134
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.95 E-value=0.00085 Score=66.21 Aligned_cols=59 Identities=24% Similarity=0.325 Sum_probs=51.7
Q ss_pred EEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhcc
Q 038498 181 FDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFLA 246 (248)
Q Consensus 181 ~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~~ 246 (248)
.++.| -+|..-++.|.+ -+.|.++|| +-||.++++.|. .|+||+ ++.+..|++||+|+-
T Consensus 650 ar~sP--e~K~~iV~~lq~~g~vVam~GD----GvNDapALk~Ad-VGIAmg~~gtdvAk~aADivL~ 710 (941)
T TIGR01517 650 ARSSP--LDKQLLVLMLKDMGEVVAVTGD----GTNDAPALKLAD-VGFSMGISGTEVAKEASDIILL 710 (941)
T ss_pred EECCH--HHHHHHHHHHHHCCCEEEEECC----CCchHHHHHhCC-cceecCCCccHHHHHhCCEEEe
Confidence 34444 689999999987 446999999 999999999999 999999 899999999999874
No 135
>PRK06769 hypothetical protein; Validated
Probab=96.93 E-value=0.00095 Score=52.46 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=36.3
Q ss_pred cceEEEEecCCCCCCCCC-------CCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 6 QGLLALFDVDGTLTAPRK-------AATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
.+|+|++|.||||-.++. .+-+.+.+.|++|+++ ++++++|+.+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 689999999999965522 2457789999999999 9999999764
No 136
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.93 E-value=0.00086 Score=66.51 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=47.2
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhcc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFLA 246 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~~ 246 (248)
-+|..-++.+.+ -.-|.++|| +.||.+|++.|+ .|+||++ +++-.|++||+|+.
T Consensus 670 eqK~~IV~~lq~~g~vv~~~GD----G~ND~paLk~Ad-VGiamg~~G~~vak~aADivL~ 725 (997)
T TIGR01106 670 QQKLIIVEGCQRQGAIVAVTGD----GVNDSPALKKAD-IGVAMGIAGSDVSKQAADMILL 725 (997)
T ss_pred HHHHHHHHHHHHCCCEEEEECC----CcccHHHHhhCC-cceecCCcccHHHHHhhceEEe
Confidence 478888888876 446899999 999999999999 9999995 79999999999874
No 137
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=96.92 E-value=0.0017 Score=53.06 Aligned_cols=30 Identities=17% Similarity=0.313 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHh
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQL 57 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l 57 (248)
.+.++|.+|+++ +.++++|+.+...+...+
T Consensus 90 Gv~~~l~~L~~~~i~~avaS~s~~~~~~~~L 120 (221)
T COG0637 90 GVVELLEQLKARGIPLAVASSSPRRAAERVL 120 (221)
T ss_pred cHHHHHHHHHhcCCcEEEecCChHHHHHHHH
Confidence 346667777777 777888877755444444
No 138
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.89 E-value=0.0011 Score=62.66 Aligned_cols=79 Identities=16% Similarity=0.200 Sum_probs=60.9
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
+...+.-...+..+++ +. ....+..| -+|..-++.+.+.. -|.+.|| +-||.+.|+.++ .|+||
T Consensus 468 TGDn~~TA~aIA~elG---Id-----~v~A~~~P--edK~~iV~~lQ~~G~~VaMtGD----GvNDAPALa~AD-VGIAM 532 (679)
T PRK01122 468 TGDNPLTAAAIAAEAG---VD-----DFLAEATP--EDKLALIRQEQAEGRLVAMTGD----GTNDAPALAQAD-VGVAM 532 (679)
T ss_pred CCCCHHHHHHHHHHcC---Cc-----EEEccCCH--HHHHHHHHHHHHcCCeEEEECC----CcchHHHHHhCC-EeEEe
Confidence 3444455556666654 11 12334555 58999999998744 5899999 999999999999 99999
Q ss_pred cCchhhHHHHhhhhc
Q 038498 231 TSPEDTMEKCKALFL 245 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~ 245 (248)
+++++..|++||.|+
T Consensus 533 gsGTdvAkeAADiVL 547 (679)
T PRK01122 533 NSGTQAAKEAGNMVD 547 (679)
T ss_pred CCCCHHHHHhCCEEE
Confidence 999999999999987
No 139
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.88 E-value=0.0015 Score=48.14 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=44.6
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc---cCchhhHHHHhhhhccC
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV---TSPEDTMEKCKALFLAK 247 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av---~Na~~~~k~~A~~v~~~ 247 (248)
-.|..-++.|.+ .+.++++|| +-||+.|++.+. .++++ +++++.+...|++|.+.
T Consensus 80 e~K~~ii~eLkk~~~k~vmVGn----GaND~laLr~AD-lGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 80 EMKAKIIRELKKRYEKVVMVGN----GANDILALREAD-LGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred HHHHHHHHHhcCCCcEEEEecC----CcchHHHhhhcc-cceEEeccCCcchHHHhhchhhhhh
Confidence 457777777775 578999999 999999999998 88765 45778888888888765
No 140
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.85 E-value=0.0011 Score=64.91 Aligned_cols=58 Identities=22% Similarity=0.353 Sum_probs=51.1
Q ss_pred EEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 181 FDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 181 ~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
..+.| -+|..-++.|.+ -+-|.+.|| +-||.+.|+.|. .|+||++++|..|++||.|+
T Consensus 619 Ar~sP--e~K~~IV~~Lq~~G~vVam~GD----GvNDaPALk~AD-VGIAmg~gtdvAkeaADiVL 677 (902)
T PRK10517 619 ARLTP--MHKERIVTLLKREGHVVGFMGD----GINDAPALRAAD-IGISVDGAVDIAREAADIIL 677 (902)
T ss_pred EEcCH--HHHHHHHHHHHHCCCEEEEECC----CcchHHHHHhCC-EEEEeCCcCHHHHHhCCEEE
Confidence 34444 679999999887 445899999 999999999999 99999999999999999987
No 141
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.82 E-value=0.0012 Score=64.84 Aligned_cols=59 Identities=27% Similarity=0.405 Sum_probs=51.9
Q ss_pred EEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 180 SFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 180 ~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
+.++.| -+|..-++.|.+.. -|.++|| +-||.+.|+.|. .|+||+++++-.|++||.|+
T Consensus 618 fAr~sP--e~K~~iV~~Lq~~G~vVamtGD----GvNDaPALk~AD-VGIAmg~gtdvAkeaADiVL 677 (903)
T PRK15122 618 FAKLTP--LQKSRVLKALQANGHTVGFLGD----GINDAPALRDAD-VGISVDSGADIAKESADIIL 677 (903)
T ss_pred EEEeCH--HHHHHHHHHHHhCCCEEEEECC----CchhHHHHHhCC-EEEEeCcccHHHHHhcCEEE
Confidence 344555 68999999998744 5889999 999999999999 99999999999999999987
No 142
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.81 E-value=0.0016 Score=50.56 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=30.0
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A 241 (248)
++++++||| +.+|+.+.+.+|+.++++....-.---+|
T Consensus 120 ~~e~l~IGD----~~~Di~~A~~aGi~~i~~~~~~~~~~~~~ 157 (161)
T TIGR01261 120 KARSYVIGD----RETDMQLAENLGIRGIQYDEEELNWDMIA 157 (161)
T ss_pred HHHeEEEeC----CHHHHHHHHHCCCeEEEEChhhcCHHHHH
Confidence 678999999 99999999999988888776654333333
No 143
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.81 E-value=0.0014 Score=63.26 Aligned_cols=59 Identities=25% Similarity=0.336 Sum_probs=52.1
Q ss_pred EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
+.++.| -+|..-++.+.+ -+-|.++|| +-||.+.|+.|+ .|+||+++++..|+.|+.|+
T Consensus 515 fAr~~P--e~K~~iV~~lq~~G~~VamvGD----GvNDapAL~~Ad-VGIAm~~gtdvAkeaADivL 574 (755)
T TIGR01647 515 FAEVFP--EHKYEIVEILQKRGHLVGMTGD----GVNDAPALKKAD-VGIAVAGATDAARSAADIVL 574 (755)
T ss_pred EEecCH--HHHHHHHHHHHhcCCEEEEEcC----CcccHHHHHhCC-eeEEecCCcHHHHHhCCEEE
Confidence 445566 579999999987 456999999 999999999999 99999999999999999987
No 144
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.75 E-value=0.0014 Score=61.96 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=59.8
Q ss_pred cchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhccC-CEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 153 NIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFN-EIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 153 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~~~-~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
...+.-...+.++++ +. ..+.++.| -+|..-++.+.+.. -|.+.|| +-||.+.|+.|+ .|+||+
T Consensus 465 GDn~~TA~aIA~elG---I~-----~v~A~~~P--edK~~iV~~lQ~~G~~VaMtGD----GvNDAPALa~AD-VGIAMg 529 (673)
T PRK14010 465 GDNELTAATIAKEAG---VD-----RFVAECKP--EDKINVIREEQAKGHIVAMTGD----GTNDAPALAEAN-VGLAMN 529 (673)
T ss_pred CCCHHHHHHHHHHcC---Cc-----eEEcCCCH--HHHHHHHHHHHhCCCEEEEECC----ChhhHHHHHhCC-EEEEeC
Confidence 344444555555544 11 12334455 68999999998744 5889999 999999999999 999999
Q ss_pred CchhhHHHHhhhhc
Q 038498 232 SPEDTMEKCKALFL 245 (248)
Q Consensus 232 Na~~~~k~~A~~v~ 245 (248)
++.+..|++|+.|+
T Consensus 530 sGTdvAkeAADiVL 543 (673)
T PRK14010 530 SGTMSAKEAANLID 543 (673)
T ss_pred CCCHHHHHhCCEEE
Confidence 99999999999987
No 145
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.69 E-value=0.002 Score=63.21 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=48.1
Q ss_pred CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhc
Q 038498 187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFL 245 (248)
Q Consensus 187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~ 245 (248)
.-+|..-++.+.+ .+.++++|| +.||.++++.|+ .|++|+ ++.+..|+.|++|+
T Consensus 603 P~~K~~iv~~lq~~g~~v~mvGD----GvND~pAl~~Ad-VGia~g~~g~~va~~aaDivl 658 (884)
T TIGR01522 603 PEHKMKIVKALQKRGDVVAMTGD----GVNDAPALKLAD-IGVAMGQTGTDVAKEAADMIL 658 (884)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC----CcccHHHHHhCC-eeEecCCCcCHHHHHhcCEEE
Confidence 3678888888877 567999999 999999999999 999998 58999999999987
No 146
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.66 E-value=0.0031 Score=52.99 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=36.8
Q ss_pred ccceEEEEecCCCCCCCC----------CC----------------CCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 5 KQGLLALFDVDGTLTAPR----------KA----------------ATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~----------~~----------------i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
.+..+|+||||+|+++.. .. +-+.+.+.|+.|+++ +.++++|+|+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~ 146 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEK 146 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 456799999999999643 11 234568899999999 999999999843
No 147
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.003 Score=53.00 Aligned_cols=54 Identities=22% Similarity=0.271 Sum_probs=42.2
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhcc
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLGK 59 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~~ 59 (248)
++++.++||+||||.... ..-+...++|++|+++ .++++.|-.+- ..+.++|..
T Consensus 6 ~~y~~~l~DlDGvl~~G~-~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGN-EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hhcCEEEEcCcCceEeCC-ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 567899999999999764 4566779999999999 98888876553 346666655
No 148
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.58 E-value=0.0019 Score=63.50 Aligned_cols=60 Identities=22% Similarity=0.261 Sum_probs=51.9
Q ss_pred EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhcc
Q 038498 180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFLA 246 (248)
Q Consensus 180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~~ 246 (248)
+..+.| -+|..-++.|.+ -+-|.++|| +-||.+|++.|+ .|++|+. +.|..|++|+.|+.
T Consensus 619 fARvsP--~qK~~IV~~lq~~g~vVamtGD----GvNDapALk~AD-VGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 619 FARVSP--EQKARIVEALQKSGHVVAMTGD----GVNDAPALKAAD-VGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred EEEcCH--HHHHHHHHHHHhCCCEEEEeCC----CchhHHHHHhcC-ccEEecccHHHHHHhhcceEee
Confidence 344555 789999999998 455899999 999999999999 9999995 99999999998873
No 149
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.48 E-value=0.003 Score=59.97 Aligned_cols=79 Identities=19% Similarity=0.313 Sum_probs=65.1
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
+...+.-.+.+..+++ +. ....++.| -+|...++.|.+ -..++++|| +-||-+.|..+. .|+||
T Consensus 560 TGDn~~~A~~iA~~lG---Id-----~v~AellP--edK~~~V~~l~~~g~~VamVGD----GINDAPALA~Ad-VGiAm 624 (713)
T COG2217 560 TGDNRRTAEAIAKELG---ID-----EVRAELLP--EDKAEIVRELQAEGRKVAMVGD----GINDAPALAAAD-VGIAM 624 (713)
T ss_pred cCCCHHHHHHHHHHcC---hH-----hheccCCc--HHHHHHHHHHHhcCCEEEEEeC----CchhHHHHhhcC-eeEee
Confidence 4455666677777765 21 23455777 689999999997 568999999 999999999998 99999
Q ss_pred cCchhhHHHHhhhhc
Q 038498 231 TSPEDTMEKCKALFL 245 (248)
Q Consensus 231 ~Na~~~~k~~A~~v~ 245 (248)
+.++|-.++.||.|+
T Consensus 625 G~GtDvA~eaADvvL 639 (713)
T COG2217 625 GSGTDVAIEAADVVL 639 (713)
T ss_pred cCCcHHHHHhCCEEE
Confidence 999999999999987
No 150
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=96.40 E-value=0.0013 Score=54.15 Aligned_cols=47 Identities=28% Similarity=0.325 Sum_probs=37.3
Q ss_pred ccceEEEEecCCCCCCCC--------------------------CCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 5 KQGLLALFDVDGTLTAPR--------------------------KAATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
.+..+|+||||+|+|++. ...-+.+++.++.++++ +.|+++|||+-.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 467899999999999521 11234578999999999 999999999865
No 151
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.35 E-value=0.0067 Score=46.32 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=37.6
Q ss_pred ceEEEEecCCCCCCCCC--------------------------CCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhc
Q 038498 7 GLLALFDVDGTLTAPRK--------------------------AATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~ 58 (248)
.+++++||||||++... .+-+.+.+.|+.|++.+.++|+|+.+...+...+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 57899999999998631 01245678888887339999999888775554444
No 152
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=96.34 E-value=0.002 Score=53.30 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=31.5
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCc
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na 233 (248)
.+.......++ ++++++||| + ..|+...+.+|+.++++...
T Consensus 164 P~p~~~~~a~~~~~~~~~~~~~VGD----~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIGEILHVGD----DLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred CcHHHHHHHHHHcCCChhHEEEEcC----CcHHHHHHHHHCCCeEEEEcCC
Confidence 34445554443 889999999 9 59999999999888888664
No 153
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=96.32 E-value=0.0043 Score=47.82 Aligned_cols=47 Identities=26% Similarity=0.314 Sum_probs=32.3
Q ss_pred eEEEEecCCCCCCCCCC-------------------CCHHHHHHHHHHhhcCeEEEEcCCChHHHH
Q 038498 8 LLALFDVDGTLTAPRKA-------------------ATPQMLEFMRELRKVVTVGVVGGSDLSKIS 54 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~-------------------i~~~~~~al~~l~~~~~v~iaTGR~~~~~~ 54 (248)
|++++||||||++.... +=|...+.|+.+.+...+++.|..+.....
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~ 66 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAE 66 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhh
Confidence 78999999999976432 245678889888555899999988865433
No 154
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.31 E-value=0.0035 Score=50.17 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=36.7
Q ss_pred eCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 185 PQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 185 ~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
..+-.|...++.+++ +++++++|| |.+|++|++.+| .+++|..
T Consensus 151 ~~g~~K~~~l~~~~~~~~~~~~~~~~~gD----s~~D~~~~~~a~-~~~~v~~ 198 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQIDLKDSYAYGD----SISDLPLLSLVG-HPYVVNP 198 (202)
T ss_pred CCChHHHHHHHHHHHHcCCCHHHcEeeeC----CcccHHHHHhCC-CcEEeCC
Confidence 346678888988875 568999999 999999999999 9988764
No 155
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.29 E-value=0.013 Score=50.66 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=43.0
Q ss_pred cceEEEEecCCCCCCCC---C--------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 6 QGLLALFDVDGTLTAPR---K--------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~---~--------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
.+|+|++|+|+||.... . ..-+.+.+.|++|+++ +.++++|..+...+.+.+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 47999999999998641 1 1236789999999999 99999999998766665553
No 156
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.14 E-value=0.014 Score=45.84 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=33.2
Q ss_pred eCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 185 PQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 185 ~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
+.+..|...++.+.+ ++++++||| +.||+.+.+.++ ..+|
T Consensus 145 ~~g~~K~~~~~~~~~~~~~~~i~iGD----~~~D~~aa~~~d-~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPKYQHIIYIGD----GVTDVCPAKLSD-VVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhcCceEEEECC----CcchhchHhcCC-cccc
Confidence 455778888888875 788999999 999999999887 5544
No 157
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.11 E-value=0.0022 Score=51.28 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=22.3
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMREL 36 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l 36 (248)
+|+||+||||+++...+.....++++++
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~ 29 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHF 29 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHH
Confidence 6899999999999766666666777665
No 158
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.10 E-value=0.0087 Score=47.17 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=34.6
Q ss_pred ceEEEEecCCCCCCCCC-C--------CCHHHHHHHHHHhhc-CeEEEEcC
Q 038498 7 GLLALFDVDGTLTAPRK-A--------ATPQMLEFMRELRKV-VTVGVVGG 47 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~-~--------i~~~~~~al~~l~~~-~~v~iaTG 47 (248)
.|++|+|-||||..+.+ . +.+.+++++..|.+. ++++++|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 78999999999997755 2 356779999999998 99999984
No 159
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.05 E-value=0.011 Score=49.38 Aligned_cols=46 Identities=22% Similarity=0.292 Sum_probs=36.2
Q ss_pred cceEEEEecCCCCCCC---------------------------CCCCCHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 6 QGLLALFDVDGTLTAP---------------------------RKAATPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~---------------------------~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
..-+++||+|+|+++. ..+..+.+++.++.+++. +.|+++|||+-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3478999999999932 012345678899999999 999999999854
No 160
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.04 E-value=0.015 Score=50.28 Aligned_cols=47 Identities=23% Similarity=0.317 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHhh-----cCeEEEE---cCCChHHHHHH
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRELRK-----VVTVGVV---GGSDLSKISEQ 56 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~l~~-----~~~v~ia---TGR~~~~~~~~ 56 (248)
+++||+||||.+... +-+...++|+.|+. ...+.+. +|++..+..+.
T Consensus 2 ~~ifD~DGvL~~g~~-~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK-PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred EEEEeCcCceECCcc-ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 589999999998755 47788999998887 4444444 46666554443
No 161
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.87 E-value=0.011 Score=51.80 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=36.4
Q ss_pred cceEEEEecCCCCCCCC-----------CCCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498 6 QGLLALFDVDGTLTAPR-----------KAATPQMLEFMRELRKV-VTVGVVGGS 48 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~-----------~~i~~~~~~al~~l~~~-~~v~iaTGR 48 (248)
+.|++++|-||||+... -.+-+.+.++|..|+++ ++++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 46899999999999862 23567789999999999 999999984
No 162
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.86 E-value=0.014 Score=45.60 Aligned_cols=50 Identities=28% Similarity=0.401 Sum_probs=31.4
Q ss_pred cceEEEEecCCCCCCCC--------------C-----------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHH
Q 038498 6 QGLLALFDVDGTLTAPR--------------K-----------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISE 55 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~--------------~-----------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~ 55 (248)
-.|||+||||+||-+.- + .+-+.+..+|++|+++ +++++||=-+.+++.+
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~ 77 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWAR 77 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHH
Confidence 47999999999998531 0 1345678999999999 9999999656555443
No 163
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.83 E-value=0.0052 Score=49.95 Aligned_cols=40 Identities=3% Similarity=-0.159 Sum_probs=30.7
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
-.+.......++ ++++++||| +.+|+...+.+|+..+.+.
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igD----s~~di~aA~~aG~~~i~~~ 186 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDD----SSAGAQSGIAAGMEVFYFC 186 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeC----cHhhHHHHHHCCCEEEEEC
Confidence 334555665554 789999999 9999999999996666563
No 164
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.81 E-value=0.019 Score=45.88 Aligned_cols=51 Identities=20% Similarity=0.263 Sum_probs=37.8
Q ss_pred cccccceEEEEecCCCCCCCCC-------CCCHHHHHHHHHHhhcCeEEEEcCCChHH
Q 038498 2 AARKQGLLALFDVDGTLTAPRK-------AATPQMLEFMRELRKVVTVGVVGGSDLSK 52 (248)
Q Consensus 2 ~~~~~~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~~~v~iaTGR~~~~ 52 (248)
..+.+.|++++|||+||++... ..=|...+.|+.+.+...++|=|..+..-
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~y 73 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKW 73 (195)
T ss_pred CCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHH
Confidence 3456779999999999998632 12456788888888887777777776543
No 165
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=95.73 E-value=0.0092 Score=47.04 Aligned_cols=37 Identities=11% Similarity=-0.012 Sum_probs=28.0
Q ss_pred HHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 190 KTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 190 K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
+....+.+++ ++++++||| +..|+...+.+|+.++.|
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~vgD----~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIFFDD----SARNIAAAKALGMKTVLV 184 (184)
T ss_pred CHHHHHHHHHHhCCCccceEEEeC----CHHHHHHHHHcCCEEeeC
Confidence 3344555443 889999999 999999999999655543
No 166
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.72 E-value=0.014 Score=58.39 Aligned_cols=54 Identities=19% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh-hHHHHhhhhcc
Q 038498 188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED-TMEKCKALFLA 246 (248)
Q Consensus 188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~-~~k~~A~~v~~ 246 (248)
-.|+.-++.+.+ ..-|+++|| +.||.+|++.|. .|+++.+.+. .++.+||+++.
T Consensus 754 ~qK~~IV~~lk~~~~~~vl~iGD----G~ND~~mlk~Ad-VGIgi~g~eg~qA~~aaD~~i~ 810 (1057)
T TIGR01652 754 SQKADVVRLVKKSTGKTTLAIGD----GANDVSMIQEAD-VGVGISGKEGMQAVMASDFAIG 810 (1057)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeC----CCccHHHHhhcC-eeeEecChHHHHHHHhhhhhhh
Confidence 578888888876 456999999 999999999998 9999876654 47888988763
No 167
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.66 E-value=0.013 Score=45.05 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.++|++|+++ ++++++|+.+...+...+.
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~ 112 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLE 112 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHH
T ss_pred hhhhhhhhhhcccccceeEEeecCCccccccccc
Confidence 44567788888878 8999998888765444333
No 168
>PRK09449 dUMP phosphatase; Provisional
Probab=95.32 E-value=0.015 Score=47.33 Aligned_cols=28 Identities=11% Similarity=-0.124 Sum_probs=24.4
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEcc
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVT 231 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~ 231 (248)
++++++||| +. +|+...+.+|+.++.+.
T Consensus 168 ~~~~~~vgD----~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 168 RSRVLMVGD----NLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred cccEEEEcC----CcHHHHHHHHHCCCcEEEEC
Confidence 468999999 98 79999999997777775
No 169
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.28 E-value=0.02 Score=54.48 Aligned_cols=53 Identities=23% Similarity=0.322 Sum_probs=48.2
Q ss_pred CCHHHHHHHhhccCC-EEEEcCCCCCCCCCHHHHhhCCCceEEcc-CchhhHHHHhhhhc
Q 038498 188 WDKTYCLRYLDDFNE-IHFFGDKTYKGGNDHEIFESERTVGHTVT-SPEDTMEKCKALFL 245 (248)
Q Consensus 188 ~~K~~al~~l~~~~~-~~aiGD~~~~~~NDi~M~~~~g~~~~av~-Na~~~~k~~A~~v~ 245 (248)
-+|-.-++.|.+.++ +.+-|| +-||-+.|+.|. .|+||| |+.+..|++++-|+
T Consensus 664 ~HK~kIVeaLq~~geivAMTGD----GVNDApALK~Ad-IGIAMG~~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 664 QHKLKIVEALQSRGEVVAMTGD----GVNDAPALKKAD-IGIAMGISGTDVAKEASDMVL 718 (972)
T ss_pred hhHHHHHHHHHhcCCEEEecCC----Cccchhhhhhcc-cceeecCCccHhhHhhhhcEE
Confidence 678889999998554 777899 999999999999 999999 99999999999987
No 170
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.27 E-value=0.041 Score=43.87 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHH
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKIS 54 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~ 54 (248)
.+.+.|+.++++ ++++++||.....+.
T Consensus 91 ~~~~~l~~l~~~g~~v~ivS~s~~~~v~ 118 (202)
T TIGR01490 91 EARDLIRWHKAEGHTIVLVSASLTILVK 118 (202)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 446666677777 888888887754333
No 171
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=95.12 E-value=0.057 Score=41.67 Aligned_cols=53 Identities=23% Similarity=0.268 Sum_probs=36.7
Q ss_pred ccceEEEEecCCCCCCCCCC--C---------------------------------CHHHHHHHHHHhhcCeEEEEcCCC
Q 038498 5 KQGLLALFDVDGTLTAPRKA--A---------------------------------TPQMLEFMRELRKVVTVGVVGGSD 49 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~--i---------------------------------~~~~~~al~~l~~~~~v~iaTGR~ 49 (248)
.+.+.+++|||.||+++... . -|...+.|+++.+.+.+++.|..+
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~~ 83 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMGT 83 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCCc
Confidence 46788999999999986432 1 135577787777448888888887
Q ss_pred hHHHHHHh
Q 038498 50 LSKISEQL 57 (248)
Q Consensus 50 ~~~~~~~l 57 (248)
.....+.+
T Consensus 84 ~~yA~~vl 91 (156)
T TIGR02250 84 RAYAQAIA 91 (156)
T ss_pred HHHHHHHH
Confidence 65443333
No 172
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=95.08 E-value=0.064 Score=41.62 Aligned_cols=50 Identities=20% Similarity=0.194 Sum_probs=36.1
Q ss_pred eEEEEecCCCCCCCCCCC------------------------CHHHHHHHHHHhhcCeEEEEcCCChHHHHHHh
Q 038498 8 LLALFDVDGTLTAPRKAA------------------------TPQMLEFMRELRKVVTVGVVGGSDLSKISEQL 57 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i------------------------~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l 57 (248)
+.+++|||+||+++.... =|...+.|..+.+...++|.|..+.....+.+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVL 75 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHH
Confidence 689999999999874321 23468899998766888888887765443333
No 173
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=94.89 E-value=0.029 Score=43.97 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.9
Q ss_pred eEEEEecCCCCCCCCC
Q 038498 8 LLALFDVDGTLTAPRK 23 (248)
Q Consensus 8 kli~~DlDGTLl~~~~ 23 (248)
-+|+||+||||++.+.
T Consensus 2 ~~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 2 VVVVSDFDGTITLNDS 17 (188)
T ss_pred eEEEEeCCCcccCCCc
Confidence 4799999999998855
No 174
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.70 E-value=0.043 Score=55.39 Aligned_cols=53 Identities=17% Similarity=0.257 Sum_probs=40.6
Q ss_pred CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch-hhHHHHhhhhc
Q 038498 188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE-DTMEKCKALFL 245 (248)
Q Consensus 188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~-~~~k~~A~~v~ 245 (248)
..|+.-++.+.+ ..-+++||| |.||.+|++.|. .||++..-+ -.++.+||+..
T Consensus 857 ~QKa~IV~~vk~~~~~vtlaIGD----GaNDv~mIq~Ad-VGIGIsG~EG~qA~~aSDfaI 912 (1178)
T PLN03190 857 LQKAGIVALVKNRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMASDFAM 912 (1178)
T ss_pred HHHHHHHHHHHhcCCcEEEEECC----CcchHHHHHhcC-eeeeecCchhHHHHHhhccch
Confidence 478777777776 346999999 999999999998 999875432 14666777765
No 175
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=94.61 E-value=0.027 Score=45.09 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=40.7
Q ss_pred ccchHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCCH--HHHHHHhh-ccCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498 152 HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK--TYCLRYLD-DFNEIHFFGDKTYKGGNDHEIFESER 224 (248)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~K--~~al~~l~-~~~~~~aiGD~~~~~~NDi~M~~~~g 224 (248)
++........+...++--...+.. +. . .+.-.| ...++.|. ++++|+++|| +.||++|++.||
T Consensus 150 TGD~~~~a~~~~~~lgi~~~~v~a-~~-~----~kP~~k~~~~~i~~l~~~~~~v~~vGD----g~nD~~al~~Ag 215 (215)
T PF00702_consen 150 TGDNESTASAIAKQLGIFDSIVFA-RV-I----GKPEPKIFLRIIKELQVKPGEVAMVGD----GVNDAPALKAAG 215 (215)
T ss_dssp ESSEHHHHHHHHHHTTSCSEEEEE-SH-E----TTTHHHHHHHHHHHHTCTGGGEEEEES----SGGHHHHHHHSS
T ss_pred eccccccccccccccccccccccc-cc-c----ccccchhHHHHHHHHhcCCCEEEEEcc----CHHHHHHHHhCc
Confidence 444455555666665411121221 11 1 445667 77888877 4789999999 999999999886
No 176
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.55 E-value=0.044 Score=52.64 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=54.2
Q ss_pred eEEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 179 ISFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 179 ~~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
-+.|+.| ..|..=++.|.+ ...+.++|| +-||-+.|..+. .|++++.+++-..+.|+.|+
T Consensus 765 V~aev~P--~~K~~~Ik~lq~~~~~VaMVGD----GINDaPALA~Ad-VGIaig~gs~vAieaADIVL 825 (951)
T KOG0207|consen 765 VYAEVLP--EQKAEKIKEIQKNGGPVAMVGD----GINDAPALAQAD-VGIAIGAGSDVAIEAADIVL 825 (951)
T ss_pred EEeccCc--hhhHHHHHHHHhcCCcEEEEeC----CCCccHHHHhhc-cceeeccccHHHHhhCCEEE
Confidence 3456777 789999999997 678999999 999999999998 99999999999999999987
No 177
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.48 E-value=0.013 Score=45.70 Aligned_cols=27 Identities=4% Similarity=-0.152 Sum_probs=20.0
Q ss_pred HHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhh
Q 038498 192 YCLRYLDD-FNEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 192 ~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
.+++.+.- ++++++||| +..|+...+.
T Consensus 147 ~~~~~~~~~p~~~l~vgD----~~~Di~~A~~ 174 (175)
T TIGR01493 147 LVFDTVGLPPDRVLMVAA----HQWDLIGARK 174 (175)
T ss_pred HHHHHHCCCHHHeEeEec----ChhhHHHHhc
Confidence 34444432 899999999 9999987764
No 178
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=94.47 E-value=0.073 Score=35.42 Aligned_cols=31 Identities=16% Similarity=0.043 Sum_probs=28.4
Q ss_pred cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCch
Q 038498 200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na~ 234 (248)
++++++||| + ..|+.+.+.+|+.++.|..+.
T Consensus 21 ~~~~~~VGD----~~~~Di~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 21 PSRCVMVGD----SLETDIEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp GGGEEEEES----STTTHHHHHHHTTSEEEEESSSS
T ss_pred HHHEEEEcC----CcHhHHHHHHHcCCcEEEECCCC
Confidence 889999999 9 999999999999999988743
No 179
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.06 E-value=0.035 Score=51.92 Aligned_cols=40 Identities=28% Similarity=0.462 Sum_probs=33.1
Q ss_pred CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.-|+.-++.|.+ ...+.|||| ++||.+|.++|. .|+++..
T Consensus 767 tQKA~v~~llq~~t~krvc~IGD----GGNDVsMIq~A~-~GiGI~g 808 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTGKRVCAIGD----GGNDVSMIQAAD-VGIGIVG 808 (1051)
T ss_pred hHHHHHHHHHHHhhCceEEEEcC----CCccchheeecc-cceeeec
Confidence 567777777776 778999999 999999999987 7877654
No 180
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.74 E-value=0.16 Score=40.33 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=32.3
Q ss_pred CHHHHHHHhhc---cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc-C-chhhHHHHhhh
Q 038498 189 DKTYCLRYLDD---FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT-S-PEDTMEKCKAL 243 (248)
Q Consensus 189 ~K~~al~~l~~---~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~-N-a~~~~k~~A~~ 243 (248)
.|+.+|+.+++ ...++++|| +.||++|...+. .-++.+ | -.+.+|.-|++
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGD----GatDlea~~pa~-afi~~~g~~~r~~vk~nak~ 213 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGD----GATDLEAMPPAD-AFIGFGGNVIREGVKANAKW 213 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecC----CccccccCCchh-hhhccCCceEcHhhHhccHH
Confidence 57777777776 567889999 999999888654 222222 2 34455555544
No 181
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.68 E-value=0.081 Score=41.57 Aligned_cols=29 Identities=31% Similarity=0.412 Sum_probs=26.0
Q ss_pred CHHHHHHHh---h----ccCCEEEEcCCCCCCCCCHHHHh
Q 038498 189 DKTYCLRYL---D----DFNEIHFFGDKTYKGGNDHEIFE 221 (248)
Q Consensus 189 ~K~~al~~l---~----~~~~~~aiGD~~~~~~NDi~M~~ 221 (248)
+|...++.+ . ....++++|| |.||++||+
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGD----s~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGD----SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEES----SGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEEC----CHHHHHHhC
Confidence 699999999 2 2788999999 999999986
No 182
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=93.61 E-value=0.097 Score=41.63 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=10.5
Q ss_pred eE-EEEecCCCCCC
Q 038498 8 LL-ALFDVDGTLTA 20 (248)
Q Consensus 8 kl-i~~DlDGTLl~ 20 (248)
|+ |++||||||++
T Consensus 2 ~i~I~iDiDgVLad 15 (191)
T PF06941_consen 2 KIRIAIDIDGVLAD 15 (191)
T ss_dssp -EEEEEESBTTTB-
T ss_pred CcEEEEECCCCCcc
Confidence 67 99999999997
No 183
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.28 E-value=0.081 Score=48.65 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=41.7
Q ss_pred CCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 187 GWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 187 ~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
.-.|..-++.+.+ ...++++|| +.||.++++.++ .|++|+ .++.|+.++
T Consensus 392 p~~K~~~v~~l~~~g~~v~~vGD----g~nD~~al~~Ad-vgia~~-----a~~~adivl 441 (499)
T TIGR01494 392 PEEKAALVEALQKKGRVVAMTGD----GVNDAPALKKAD-VGIAMG-----AKAAADIVL 441 (499)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC----ChhhHHHHHhCC-Cccccc-----hHHhCCeEE
Confidence 3678888888876 457999999 999999999999 999997 477788876
No 184
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.22 E-value=0.047 Score=43.93 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=34.5
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL 243 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~ 243 (248)
++++++||| +..|+.+.+.+|+.++.+.+.......++..
T Consensus 169 ~~~~l~i~D----~~~di~aA~~aG~~~i~v~~~~~~~~~l~~~ 208 (211)
T TIGR02247 169 PEECVFLDD----LGSNLKPAAALGITTIKVSDEEQAIHDLEKA 208 (211)
T ss_pred HHHeEEEcC----CHHHHHHHHHcCCEEEEECCHHHHHHHHHHH
Confidence 889999999 9999999999998999998877666666554
No 185
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.90 E-value=0.087 Score=42.71 Aligned_cols=31 Identities=19% Similarity=-0.009 Sum_probs=25.3
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~ 234 (248)
++++++||| +. ||+.-.+.+|+.+|.+....
T Consensus 171 p~~~l~VgD----~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 171 PEEALFVGD----SLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred cceEEEECC----ChhhhhHHHHhcCcEEEEECCCC
Confidence 889999999 75 56599999998888777643
No 186
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=92.73 E-value=0.066 Score=47.43 Aligned_cols=72 Identities=10% Similarity=0.153 Sum_probs=43.9
Q ss_pred ccceEEEEecCCCCCCCCCC--C---------CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecC
Q 038498 5 KQGLLALFDVDGTLTAPRKA--A---------TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSEN 72 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~--i---------~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~n 72 (248)
...|+|++||||||+.++.- + ...+....-+.-.+ +++..-|.|++-.....-.- =..|++|
T Consensus 373 ~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsy------lrnieQn 446 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSY------LRNIEQN 446 (580)
T ss_pred CCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhH------HHhhhhc
Confidence 45689999999999987631 1 22334444455556 89999999998543221111 0235666
Q ss_pred CcEEEeCCcE
Q 038498 73 GLVAHKDGKL 82 (248)
Q Consensus 73 Ga~i~~~~~~ 82 (248)
|..+.+++-+
T Consensus 447 gykLpdgpvi 456 (580)
T COG5083 447 GYKLPDGPVI 456 (580)
T ss_pred CccCCCCCEe
Confidence 6655554433
No 187
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=92.68 E-value=0.53 Score=37.10 Aligned_cols=15 Identities=33% Similarity=0.468 Sum_probs=12.4
Q ss_pred cceEEEEecCCCCCC
Q 038498 6 QGLLALFDVDGTLTA 20 (248)
Q Consensus 6 ~~kli~~DlDGTLl~ 20 (248)
+.-.|++|+|||+.-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 446799999999984
No 188
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=92.43 E-value=0.048 Score=43.57 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=23.2
Q ss_pred ceEEEEecCCCCCCCCCCC----CHHHHHHHHHH
Q 038498 7 GLLALFDVDGTLTAPRKAA----TPQMLEFMREL 36 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i----~~~~~~al~~l 36 (248)
+++|+||.||||+.....+ .......+.++
T Consensus 1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~~~~~ 34 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVAPPSNEAALAIAAAL 34 (215)
T ss_dssp ESEEEEECCTTTBESHHEEESCSHHHHHHHHHHH
T ss_pred CeEEEEecCCCcccCeEEEEeccHHHHHHHHHHh
Confidence 5799999999999887777 55556666555
No 189
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=92.27 E-value=0.11 Score=51.76 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=39.6
Q ss_pred EEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 180 SFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 180 ~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
.+-+-....-|+.-++.+.+ ..-++|||| +.||++|.+.|+ .||+++..+
T Consensus 772 ViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGD----GANDVsMIQ~Ah-VGVGIsG~E 823 (1151)
T KOG0206|consen 772 VICCRVSPLQKALVVKLVKKGLKAVTLAIGD----GANDVSMIQEAH-VGVGISGQE 823 (1151)
T ss_pred EEEccCCHHHHHHHHHHHHhcCCceEEEeeC----CCccchheeeCC-cCeeeccch
Confidence 33444455778888888865 678999999 999999999998 888887643
No 190
>COG4996 Predicted phosphatase [General function prediction only]
Probab=91.76 E-value=0.67 Score=34.46 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=36.1
Q ss_pred eEEEEecCCCCCCCCC------------------------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 8 LLALFDVDGTLTAPRK------------------------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 8 kli~~DlDGTLl~~~~------------------------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
++|+||+||||-+..+ .+-+.+++.++-++.. +.+..+|=.-.....+.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHH
Confidence 4799999999997421 1234678888888888 8888888776654444443
No 191
>PLN02811 hydrolase
Probab=91.53 E-value=0.27 Score=39.93 Aligned_cols=52 Identities=17% Similarity=0.126 Sum_probs=37.5
Q ss_pred HHHHHHh----hccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch--hhHHHHhhhhcc
Q 038498 191 TYCLRYL----DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE--DTMEKCKALFLA 246 (248)
Q Consensus 191 ~~al~~l----~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~--~~~k~~A~~v~~ 246 (248)
-.+++.+ .+++++++||| +..|+.+.+.+|+.++.|.... ......++++..
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgD----s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~ 201 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFED----APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLS 201 (220)
T ss_pred HHHHHHhCCCCCCccceEEEec----cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhc
Confidence 4566666 34789999999 9999999999998888886642 122234555543
No 192
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=91.41 E-value=0.15 Score=40.48 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=14.5
Q ss_pred ccceEEEEecCCCCCCC
Q 038498 5 KQGLLALFDVDGTLTAP 21 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~ 21 (248)
.+.++++||+|-|++.+
T Consensus 14 ~~~~aVcFDvDSTvi~e 30 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQE 30 (227)
T ss_pred HhcCeEEEecCcchhHH
Confidence 35689999999999965
No 193
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=91.20 E-value=0.2 Score=45.53 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=44.0
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhc
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 245 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~ 245 (248)
-+|-..++.-.. -.-+.+.|| +-||.+.|..+. .++||.++....|++|+-|-
T Consensus 496 EdK~~~I~~eQ~~grlVAMtGD----GTNDAPALAqAd-Vg~AMNsGTqAAkEAaNMVD 549 (681)
T COG2216 496 EDKLALIRQEQAEGRLVAMTGD----GTNDAPALAQAD-VGVAMNSGTQAAKEAANMVD 549 (681)
T ss_pred HHHHHHHHHHHhcCcEEEEcCC----CCCcchhhhhcc-hhhhhccccHHHHHhhcccc
Confidence 456666665554 345888999 999999999999 99999999999999998763
No 194
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=90.81 E-value=0.47 Score=37.16 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=33.1
Q ss_pred ccceEEEEecCCCCCCCC---------------------------------CCCCHHHHHHHHHHhhc--CeEEEEcCCC
Q 038498 5 KQGLLALFDVDGTLTAPR---------------------------------KAATPQMLEFMRELRKV--VTVGVVGGSD 49 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~---------------------------------~~i~~~~~~al~~l~~~--~~v~iaTGR~ 49 (248)
++...+-||+|.|+|-+. -.|+.+...-|..++++ -.++.+|||+
T Consensus 61 ~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt 140 (237)
T COG3700 61 RPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRT 140 (237)
T ss_pred CCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCC
Confidence 456788899999999542 12455555555566666 7899999998
Q ss_pred hH
Q 038498 50 LS 51 (248)
Q Consensus 50 ~~ 51 (248)
..
T Consensus 141 ~g 142 (237)
T COG3700 141 PG 142 (237)
T ss_pred CC
Confidence 64
No 195
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.73 E-value=0.22 Score=38.58 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=32.5
Q ss_pred eEEEEecCCCCCCCCC-----------CCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498 8 LLALFDVDGTLTAPRK-----------AATPQMLEFMRELRKV-VTVGVVGGS 48 (248)
Q Consensus 8 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~-~~v~iaTGR 48 (248)
|+++||.||||....+ .+-+.+.++|++|+++ ++++++|-.
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 7899999999998533 1235678899999888 888888865
No 196
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=90.59 E-value=0.24 Score=46.09 Aligned_cols=45 Identities=11% Similarity=0.259 Sum_probs=35.8
Q ss_pred ceEEEEecCCCCCCCCC--CC---------CHHHHHHHHHHhhc-CeEEEEcCCChH
Q 038498 7 GLLALFDVDGTLTAPRK--AA---------TPQMLEFMRELRKV-VTVGVVGGSDLS 51 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~--~i---------~~~~~~al~~l~~~-~~v~iaTGR~~~ 51 (248)
.|+|+.|+|||++.++- ++ -..+.+..-+..++ ++++..|.|+..
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIg 586 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIG 586 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhh
Confidence 48999999999998862 22 23456777778888 999999999975
No 197
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=90.59 E-value=0.37 Score=35.79 Aligned_cols=49 Identities=14% Similarity=0.099 Sum_probs=41.2
Q ss_pred EEEecCCCCCCCCCCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcc
Q 038498 10 ALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~ 59 (248)
.+-++++|+... +++-+++.+.|++|++.+.+++|||-.+.++.+....
T Consensus 17 ~~~~v~~tiatg-Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~ 65 (152)
T COG4087 17 KAGKVLYTIATG-GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF 65 (152)
T ss_pred ecceEEEEEccC-cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH
Confidence 456788998854 7789999999999988899999999998887776664
No 198
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=90.50 E-value=0.44 Score=38.31 Aligned_cols=58 Identities=28% Similarity=0.390 Sum_probs=42.7
Q ss_pred CcccccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh---HHHHHHhcc
Q 038498 1 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL---SKISEQLGK 59 (248)
Q Consensus 1 ~~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~---~~~~~~l~~ 59 (248)
|++-+.+|-+.+||-|||-.++.. .+...+|+.+|+.+ .+|-.+|--+- ..+.++|..
T Consensus 1 m~~~~~v~gvLlDlSGtLh~e~~a-vpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r 62 (262)
T KOG3040|consen 1 MSNGRAVKGVLLDLSGTLHIEDAA-VPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR 62 (262)
T ss_pred CCcccccceEEEeccceEeccccc-CCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH
Confidence 566678999999999999998774 55669999999977 66666654443 345555544
No 199
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.00 E-value=0.34 Score=39.25 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=26.8
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMREL 36 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l 36 (248)
..++.++||||.||.+....|...+.+-|.+.
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f 44 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEF 44 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHH
Confidence 35799999999999999888888887777654
No 200
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.17 E-value=0.24 Score=39.51 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=35.9
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHH
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 239 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~ 239 (248)
-.+....+.+++ ++++++||| +..|+...+.+|..++.+.++..--+.
T Consensus 141 KP~p~~~~~~~~~~~~~p~~~l~vgD----~~~di~aA~~aG~~~i~~~~~~~~~~~ 193 (199)
T PRK09456 141 KPEARIYQHVLQAEGFSAADAVFFDD----NADNIEAANALGITSILVTDKQTIPDY 193 (199)
T ss_pred CCCHHHHHHHHHHcCCChhHeEEeCC----CHHHHHHHHHcCCEEEEecCCccHHHH
Confidence 334444455443 899999999 999999999999888888886554333
No 201
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=89.16 E-value=0.18 Score=39.63 Aligned_cols=13 Identities=54% Similarity=0.892 Sum_probs=12.0
Q ss_pred EEEecCCCCCCCC
Q 038498 10 ALFDVDGTLTAPR 22 (248)
Q Consensus 10 i~~DlDGTLl~~~ 22 (248)
++||+||||+..+
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999887
No 202
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.95 E-value=0.5 Score=38.94 Aligned_cols=48 Identities=19% Similarity=0.017 Sum_probs=38.4
Q ss_pred HHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhh
Q 038498 193 CLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKAL 243 (248)
Q Consensus 193 al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~ 243 (248)
|++.+-- ++++++||| -..||++-.+.+|.+++-|.|+....+.....
T Consensus 177 al~~l~v~Pee~vhIgD---~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~~ 225 (237)
T KOG3085|consen 177 ALERLGVKPEECVHIGD---LLENDYEGARNLGWHAILVDNSITALKELEYK 225 (237)
T ss_pred HHHHhCCChHHeEEecC---ccccccHhHHHcCCEEEEEccccchhhhhhhc
Confidence 4444443 999999999 23699999999999999999998887776543
No 203
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.40 E-value=0.31 Score=45.62 Aligned_cols=62 Identities=24% Similarity=0.393 Sum_probs=52.5
Q ss_pred EEEEeeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccCC
Q 038498 180 SFDVFPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAKP 248 (248)
Q Consensus 180 ~~di~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~~ 248 (248)
+..++| -.|-.-++.|.+ ..-+-..|| +-||.+-++.+. .+++|++|.+..+.+++.|+.-|
T Consensus 565 fAgVfp--ehKy~iV~~Lq~r~hi~gmtgd----gvndapaLKkAd-igiava~atdaar~asdiVltep 627 (942)
T KOG0205|consen 565 FAGVFP--EHKYEIVKILQERKHIVGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEP 627 (942)
T ss_pred ccccCH--HHHHHHHHHHhhcCceecccCC----Ccccchhhcccc-cceeeccchhhhcccccEEEcCC
Confidence 344555 568888888887 566888999 999999999999 99999999999999999998554
No 204
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=87.80 E-value=0.57 Score=37.55 Aligned_cols=16 Identities=25% Similarity=0.337 Sum_probs=14.2
Q ss_pred ceEEEEecCCCCCCCC
Q 038498 7 GLLALFDVDGTLTAPR 22 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~ 22 (248)
+|+|+||+||||+++.
T Consensus 2 ik~viFDldGtL~d~~ 17 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSP 17 (211)
T ss_pred ceEEEEecCCceecCH
Confidence 5799999999999973
No 205
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=87.68 E-value=0.46 Score=35.97 Aligned_cols=40 Identities=10% Similarity=-0.097 Sum_probs=32.3
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
-.|...++.+++ ++++++||| +..|+...+.+|..++++.
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~IGD----s~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLVVGD----RLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEEEcC----CHHHHHHHHHCCCCEEEec
Confidence 456666666664 789999999 9999999999997777664
No 206
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.61 E-value=1.7 Score=39.42 Aligned_cols=56 Identities=21% Similarity=0.267 Sum_probs=44.2
Q ss_pred ccceEEEEecCCCCCCC----CC----CCC--------HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc
Q 038498 5 KQGLLALFDVDGTLTAP----RK----AAT--------PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT 60 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~----~~----~i~--------~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~ 60 (248)
+..|.+++|||+||... ++ +++ -...+.|..|+++ +.+++||=.......+.+..+
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred cccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC
Confidence 35699999999999842 11 233 2457788889999 999999999999998888874
No 207
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=87.43 E-value=0.42 Score=45.93 Aligned_cols=39 Identities=21% Similarity=0.354 Sum_probs=34.2
Q ss_pred CEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhc
Q 038498 202 EIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFL 245 (248)
Q Consensus 202 ~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~ 245 (248)
-|...|| +.||-+.|+.++ .|+|||- +++..|++||.|+
T Consensus 707 iVaVTGD----GVNDsPALKKAD-IGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 707 IVAVTGD----GVNDSPALKKAD-IGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEEeCC----CcCCChhhcccc-cceeeccccchHHHhhcceEE
Confidence 3667899 999999999999 9999976 7788888888876
No 208
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=87.40 E-value=0.56 Score=38.28 Aligned_cols=53 Identities=19% Similarity=0.160 Sum_probs=35.5
Q ss_pred CCCHHHHHHHhhc----cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEcc-CchhhHHHHhhh
Q 038498 187 GWDKTYCLRYLDD----FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVT-SPEDTMEKCKAL 243 (248)
Q Consensus 187 ~~~K~~al~~l~~----~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~-Na~~~~k~~A~~ 243 (248)
+.-|..-++.+++ ...++++|| |-.|..||+.+.-.| .||+ |+++...+.|+.
T Consensus 189 gg~ka~i~e~~~ele~~d~sa~~VGD----SItDv~ml~~~rgrGglAvaFNGNeYal~eAdV 247 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDFSAVVVGD----SITDVKMLEAARGRGGLAVAFNGNEYALKEADV 247 (315)
T ss_pred CcchhHHHHHHHhhcCCCcceeEecC----cccchHHHHHhhccCceEEEecCCcccccccce
Confidence 3567778888887 345799999 999999999652133 4443 455555444443
No 209
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=87.00 E-value=0.93 Score=33.38 Aligned_cols=37 Identities=16% Similarity=-0.050 Sum_probs=28.0
Q ss_pred HHHHHHHhhc------cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEc
Q 038498 190 KTYCLRYLDD------FNEIHFFGDKTYKG-GNDHEIFESERTVGHTV 230 (248)
Q Consensus 190 K~~al~~l~~------~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av 230 (248)
|...++.+++ ++++++||| + .+|+.+.+.+|..++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~IGD----~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 87 KPGMFLEALKRFNEIDPEESVYVGD----QDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred ChHHHHHHHHHcCCCChhheEEEcC----CCcccHHHHHHCCCeEEEe
Confidence 4444444443 689999999 8 89999999999666654
No 210
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=86.95 E-value=0.32 Score=38.04 Aligned_cols=41 Identities=15% Similarity=0.020 Sum_probs=30.1
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCce-EEccCc
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVG-HTVTSP 233 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~-~av~Na 233 (248)
.+...+...++ ++++++||| +.+|+...+.+|+.. +++.-.
T Consensus 107 P~p~~~~~a~~~~~~~~~~~v~VGD----s~~Di~aA~~aG~~~~i~v~~g 153 (176)
T TIGR00213 107 PKPGMLLQARKELHIDMAQSYMVGD----KLEDMQAGVAAKVKTNVLVRTG 153 (176)
T ss_pred CCHHHHHHHHHHcCcChhhEEEEcC----CHHHHHHHHHCCCcEEEEEecC
Confidence 34555555553 889999999 999999999999544 455443
No 211
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=86.78 E-value=0.6 Score=36.60 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=30.7
Q ss_pred HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
...+..+++ ++++++||| +.+|+.+.+.+|+.++++...
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgD----s~~Di~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGD----SLRDLQAAAAAGVTPVLVRTG 149 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeC----CHHHHHHHHHCCCeEEEEcCC
Confidence 444444443 889999999 999999999999777777653
No 212
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=86.50 E-value=0.88 Score=43.83 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=39.6
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A 241 (248)
..|..-|..|.+ ---++++|| +-||...++.|. .|+|.-|++++.++..
T Consensus 793 ~QKE~ii~tlK~~Gy~TLMCGD----GTNDVGALK~Ah-VGVALL~~~~e~~~~~ 842 (1160)
T KOG0209|consen 793 KQKEFIITTLKKLGYVTLMCGD----GTNDVGALKQAH-VGVALLNNPEESKKDK 842 (1160)
T ss_pred hhHHHHHHHHHhcCeEEEEecC----CCcchhhhhhcc-cceehhcCChhhhhHH
Confidence 456666666666 446999999 999999999998 9999999888665544
No 213
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=86.09 E-value=0.77 Score=44.32 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=46.6
Q ss_pred CCCHHHHHHHhhccCC-EEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhhc
Q 038498 187 GWDKTYCLRYLDDFNE-IHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALFL 245 (248)
Q Consensus 187 ~~~K~~al~~l~~~~~-~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v~ 245 (248)
..+|-.-++-|.+..+ +.+-|| +-||-+.|+.|+ .|+|||- +.+..|+.+|+|+
T Consensus 724 P~DK~lLVk~L~~~g~VVAVTGD----GTNDaPALkeAD-VGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQGEVVAVTGD----GTNDAPALKEAD-VGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred CchHHHHHHHHHhcCcEEEEecC----CCCCchhhhhcc-cchhccccchhhhhhhCCeEE
Confidence 4789999999988444 666799 999999999999 9999998 7788888888876
No 214
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.93 E-value=0.6 Score=42.91 Aligned_cols=39 Identities=18% Similarity=0.054 Sum_probs=31.5
Q ss_pred CHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 189 DKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 189 ~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.|...++.... ....++.|| |.||.+||+.|+ +.++|..
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgD----S~sD~plL~~a~-e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGD----RETDHDFMSICK-EGYMVPR 215 (497)
T ss_pred HHHHHHHHHhCCCCceEEEEC----CccHHHHHHhCC-ccEEeCC
Confidence 48888875442 122389999 999999999999 9999988
No 215
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=85.76 E-value=1.1 Score=39.39 Aligned_cols=57 Identities=12% Similarity=-0.000 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhcc
Q 038498 186 QGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 246 (248)
Q Consensus 186 ~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~ 246 (248)
..-.|...+..+++ ++++++||| +.+|+...+.+|+.++.+.-+.-.-.+++++++.
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGD----s~sDi~aAk~aGi~~I~v~~~~~~~~~i~~~l~~ 163 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGD----RETDVQLAENMGIKGIRYARETLNWDAIAEQLTK 163 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcC----CHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhc
Confidence 34455556666554 789999999 9999999999998888885555555566666553
No 216
>PRK06769 hypothetical protein; Validated
Probab=85.73 E-value=0.58 Score=36.57 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=27.3
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| +.+|+...+.+|+.++++..+
T Consensus 110 p~~~i~IGD----~~~Di~aA~~aGi~~i~v~~g 139 (173)
T PRK06769 110 LTQCAVIGD----RWTDIVAAAKVNATTILVRTG 139 (173)
T ss_pred HHHeEEEcC----CHHHHHHHHHCCCeEEEEecC
Confidence 889999999 999999999999888888764
No 217
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=84.84 E-value=0.77 Score=40.30 Aligned_cols=44 Identities=18% Similarity=0.315 Sum_probs=33.6
Q ss_pred ccceEEEEecCCCCCCCCC------------CCCHHHHHHHHHHhhc-CeEEEEcCC
Q 038498 5 KQGLLALFDVDGTLTAPRK------------AATPQMLEFMRELRKV-VTVGVVGGS 48 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-~~v~iaTGR 48 (248)
...|.+.||+||||++... -+-++.-.-|..+.+. +.++|.|--
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecc
Confidence 4568999999999998754 1344556778888888 999988743
No 218
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=84.80 E-value=1.8 Score=34.38 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=13.2
Q ss_pred eEEEEecCCCCCCCC
Q 038498 8 LLALFDVDGTLTAPR 22 (248)
Q Consensus 8 kli~~DlDGTLl~~~ 22 (248)
.+|+|||||||++.+
T Consensus 1 ~~viFDldgvL~d~~ 15 (199)
T PRK09456 1 MLYIFDLGNVIVDID 15 (199)
T ss_pred CEEEEeCCCccccCc
Confidence 489999999999874
No 219
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=84.61 E-value=0.65 Score=36.61 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=35.9
Q ss_pred eeCCCCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 184 FPQGWDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
.+-|++|+..++.+.+ .+.++++|| |-.|++....+. +-+|
T Consensus 142 s~fG~dK~~vI~~l~e~~e~~fy~GD----svsDlsaaklsD-llFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEPNESIFYCGD----SVSDLSAAKLSD-LLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcCCceEEEecC----CcccccHhhhhh-hHhh
Confidence 5679999999999999 777999999 999999998877 5554
No 220
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=84.28 E-value=0.81 Score=34.78 Aligned_cols=39 Identities=23% Similarity=0.116 Sum_probs=31.6
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
-.+....+.+++ ++++++||| +..|+.+.+.+|..++.|
T Consensus 133 Kp~~~~~~~~~~~~~~~p~~~~~vgD----~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 KPDPDAYRRALEKLGIPPEEILFVGD----SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp TTSHHHHHHHHHHHTSSGGGEEEEES----SHHHHHHHHHTTSEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcceEEEEeC----CHHHHHHHHHcCCeEEeC
Confidence 444577777775 889999999 999999999999666653
No 221
>PRK10444 UMP phosphatase; Provisional
Probab=84.00 E-value=2 Score=35.72 Aligned_cols=31 Identities=19% Similarity=-0.105 Sum_probs=27.8
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~ 234 (248)
++++++||| +. +|+.+.+.+|+.++.|..+.
T Consensus 191 ~~~~v~IGD----~~~tDi~~A~~~G~~~vlV~~G~ 222 (248)
T PRK10444 191 SEETVIVGD----NLRTDILAGFQAGLETILVLSGV 222 (248)
T ss_pred cccEEEECC----CcHHHHHHHHHcCCCEEEECCCC
Confidence 889999999 96 89999999999999987654
No 222
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=83.07 E-value=1.7 Score=36.66 Aligned_cols=30 Identities=17% Similarity=-0.054 Sum_probs=27.0
Q ss_pred cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| + ..|+.+.+.+|+.++.|..+
T Consensus 219 ~~~~lmIGD----~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 219 PARTLMVGD----RLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred hhhEEEECC----ChHHHHHHHHHcCCcEEEECCC
Confidence 889999999 9 59999999999888888664
No 223
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=82.65 E-value=0.72 Score=35.94 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=32.9
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCch
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na~ 234 (248)
.+...+..+++ ++++++||| +. .|+...+.+|+.++.|....
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGD----s~~~Di~aA~~aGi~~i~v~~g~ 139 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGD----RLFTDVMGGNRNGSYTILVEPLV 139 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECC----cchHHHHHHHHcCCeEEEEccCc
Confidence 34555666554 788999999 98 79999999998888886543
No 224
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=82.40 E-value=2.2 Score=35.19 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=22.6
Q ss_pred cccceEEEEecCCCCCCCC----------CCCCHHHHHHHHHH
Q 038498 4 RKQGLLALFDVDGTLTAPR----------KAATPQMLEFMREL 36 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~----------~~i~~~~~~al~~l 36 (248)
+.+.+.|+.|||-|+|+.. ...+|++.....+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a 118 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQA 118 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhh
Confidence 3456799999999999753 23456665555544
No 225
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=82.18 E-value=1 Score=38.22 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=31.3
Q ss_pred CCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 188 WDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 188 ~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.-+..+++.+.. ++++++||| +.+|+.+.+.+|+..++|.-
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD----~~~d~~~a~~~Gi~~i~v~~ 297 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDD----RDQVVDMWRRIGLECWQVAP 297 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcC----cHHHHHHHHHhCCeEEEecC
Confidence 344556655442 589999999 99999999999977777743
No 226
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=82.06 E-value=1.7 Score=33.58 Aligned_cols=36 Identities=14% Similarity=-0.057 Sum_probs=28.3
Q ss_pred HHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEc
Q 038498 191 TYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTV 230 (248)
Q Consensus 191 ~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av 230 (248)
....+.+++ ++++++||| +..|+.+.+.+|+.+++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD----~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDD----SPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcC----CHHHHHHHHHcCCEEEeC
Confidence 455555554 889999999 999999999999656553
No 227
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=81.85 E-value=1.5 Score=40.14 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=23.3
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHH
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMR 34 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~ 34 (248)
.....++||+||||+.+....+.=++-|++
T Consensus 6 ~~~~~~~fD~DGTLlrs~ssFpyFmlva~e 35 (498)
T PLN02499 6 TTSYSVVSELEGTLLKDADPFSYFMLVAFE 35 (498)
T ss_pred cccceEEEecccceecCCCccHHHHHHHHH
Confidence 456789999999999977766666665665
No 228
>PLN02645 phosphoglycolate phosphatase
Probab=80.41 E-value=3 Score=35.88 Aligned_cols=30 Identities=20% Similarity=0.031 Sum_probs=27.0
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| +. +|+.+.+.+|+.++.|..+
T Consensus 247 ~~~~~~VGD----~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 247 KSQICMVGD----RLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred cccEEEEcC----CcHHHHHHHHHcCCCEEEEcCC
Confidence 789999999 97 9999999999888888654
No 229
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=79.56 E-value=0.66 Score=37.91 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=39.0
Q ss_pred HHHHHHhhc-c-CCEEEEcCCCCCCCCCHHHHhhCCCceEEccC--chhhHHHHhhhhc
Q 038498 191 TYCLRYLDD-F-NEIHFFGDKTYKGGNDHEIFESERTVGHTVTS--PEDTMEKCKALFL 245 (248)
Q Consensus 191 ~~al~~l~~-~-~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N--a~~~~k~~A~~v~ 245 (248)
-.|++.+-. + +.+++|.| +.+=+.+...+|+..+++.+ -.......+.++.
T Consensus 158 l~A~~~l~~~~~~k~lVfed----s~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~ 212 (222)
T KOG2914|consen 158 LKAAKRLGVPPPSKCLVFED----SPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLIL 212 (222)
T ss_pred HHHHHhcCCCCccceEEECC----CHHHHHHHHhcCCeEEEecCCCcchhhhhccceec
Confidence 456666666 5 99999999 99999999999988888887 4445555555554
No 230
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=79.10 E-value=2.1 Score=36.75 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=29.0
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-----CeEEEEc
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-----VTVGVVG 46 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-----~~v~iaT 46 (248)
+.-.++|||||.|+...+. -+...+||+.|.++ +.+++.|
T Consensus 34 ~~fgfafDIDGVL~RG~~~-i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFRGHRP-IPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CceeEEEecccEEEecCCC-CcchHHHHHHHHhcCCCeeccEEEEe
Confidence 4567999999999977554 45567788887665 5666665
No 231
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.03 E-value=2.2 Score=33.27 Aligned_cols=27 Identities=26% Similarity=0.268 Sum_probs=20.5
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHH
Q 038498 9 LALFDVDGTLTAPRKAATPQMLEFMRE 35 (248)
Q Consensus 9 li~~DlDGTLl~~~~~i~~~~~~al~~ 35 (248)
+|+||+||||+++...+-....+++.+
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~ 28 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITE 28 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHH
Confidence 689999999999876666655555543
No 232
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=77.09 E-value=1.9 Score=34.76 Aligned_cols=18 Identities=39% Similarity=0.457 Sum_probs=15.9
Q ss_pred cceEEEEecCCCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAPRK 23 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~ 23 (248)
++|+|+||+||||+++..
T Consensus 3 ~~~~viFD~DGTL~d~~~ 20 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEV 20 (221)
T ss_pred CCCEEEECCCCCCCCChH
Confidence 589999999999998754
No 233
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=77.05 E-value=3.1 Score=34.00 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=30.9
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.+......+++ +++++++|| +..|+...+.+|+.++.+..
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfVgD----s~~Di~AA~~AG~~ti~v~r 197 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFLSD----IINELDAARKAGLHTGQLVR 197 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEEeC----CHHHHHHHHHcCCEEEEEEC
Confidence 34445555554 889999999 99999999999976766643
No 234
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=77.01 E-value=5.1 Score=33.44 Aligned_cols=17 Identities=47% Similarity=0.858 Sum_probs=14.6
Q ss_pred cceEEEEecCCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAPR 22 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~ 22 (248)
...||+||+|.||+.+.
T Consensus 19 ~~tLvvfDiDdTLi~~~ 35 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPK 35 (252)
T ss_pred CCeEEEEEcchhhhcCc
Confidence 56899999999999754
No 235
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=76.66 E-value=2 Score=36.35 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=25.5
Q ss_pred CCCHHHHHHH-hh-------ccCCEEEEcCCCCCCCCCHHHHhhC
Q 038498 187 GWDKTYCLRY-LD-------DFNEIHFFGDKTYKGGNDHEIFESE 223 (248)
Q Consensus 187 ~~~K~~al~~-l~-------~~~~~~aiGD~~~~~~NDi~M~~~~ 223 (248)
..+|...+.. .+ ++.+++++|| |.||++|....
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGD----s~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIILLGD----SQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEEECc----ChhhhhHhcCC
Confidence 4788876653 22 2678999999 99999998854
No 236
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=76.40 E-value=3.2 Score=38.24 Aligned_cols=21 Identities=33% Similarity=0.349 Sum_probs=16.5
Q ss_pred cceEEEEecCCCCCCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAPRKAAT 26 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~ 26 (248)
....++||+||||+.++...+
T Consensus 21 ~~~~~~FDfDGTLt~~~s~f~ 41 (497)
T PLN02177 21 SNQTVAADLDGTLLISRSAFP 41 (497)
T ss_pred cccEEEEecCCcccCCCCccH
Confidence 456899999999999765443
No 237
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=75.14 E-value=2.2 Score=34.78 Aligned_cols=42 Identities=26% Similarity=0.440 Sum_probs=34.3
Q ss_pred ceEEEEeeCCCCHHHHHHHhhc--------cCCEEEEcCCCCCCCCCH-HHHhhC
Q 038498 178 QISFDVFPQGWDKTYCLRYLDD--------FNEIHFFGDKTYKGGNDH-EIFESE 223 (248)
Q Consensus 178 ~~~~di~~~~~~K~~al~~l~~--------~~~~~aiGD~~~~~~NDi-~M~~~~ 223 (248)
+++-...|++.=||.-|..+.. .++++++|| +.||+ ++++..
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGD----G~nD~CP~l~Lr 202 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGD----GANDFCPVLRLR 202 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcC----CCCCcCcchhcc
Confidence 3677789999999999999974 568999999 99998 455433
No 238
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=74.20 E-value=3.2 Score=33.75 Aligned_cols=48 Identities=15% Similarity=-0.060 Sum_probs=39.3
Q ss_pred eeCCCCHHHHHHHh-hccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498 184 FPQGWDKTYCLRYL-DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED 235 (248)
Q Consensus 184 ~~~~~~K~~al~~l-~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~ 235 (248)
.|..--=-.|++.| .++++|++|.| +.|.+.....+|+..+++.+.++
T Consensus 142 KP~Pd~yL~Aa~~Lgv~P~~CvviED----s~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 142 KPAPDIYLLAAERLGVDPEECVVVED----SPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred CCCCHHHHHHHHHcCCChHHeEEEec----chhHHHHHHHCCCEEEEecCCCC
Confidence 45444446777887 45999999999 99999999999999999998544
No 239
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=74.10 E-value=4.5 Score=34.47 Aligned_cols=54 Identities=22% Similarity=0.285 Sum_probs=32.6
Q ss_pred cceEEEEecCCCCCCCCCCC--CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 6 QGLLALFDVDGTLTAPRKAA--TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i--~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
+.-.+.||-||-|..-+..| +.+++++|+++.++ +-+.=+|.+++.+..+.+..
T Consensus 21 ~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~ 77 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAK 77 (306)
T ss_pred hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHH
Confidence 46789999999999743333 34444545444444 33344455666666666654
No 240
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=73.64 E-value=3.8 Score=33.61 Aligned_cols=32 Identities=22% Similarity=0.115 Sum_probs=23.9
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMREL 36 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l 36 (248)
.++|+|+||+||||+++...+.....++++.+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFV 39 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHH
Confidence 36799999999999999766555555555444
No 241
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=73.40 E-value=3.3 Score=30.97 Aligned_cols=52 Identities=15% Similarity=0.206 Sum_probs=34.1
Q ss_pred eEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCCh-HHHHHHhcc
Q 038498 8 LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDL-SKISEQLGK 59 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~-~~~~~~l~~ 59 (248)
-+-++||||.+++-.+.=.-..-+.++.+.+. ..+++||--+. ++..+.+..
T Consensus 44 giAildL~G~~l~l~S~R~~~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~ 97 (138)
T PF04312_consen 44 GIAILDLDGELLDLKSSRNMSRSEVIEWISEYGKPVIVATDVSPPPETVKKIAR 97 (138)
T ss_pred EEEEEecCCcEEEEEeecCCCHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHH
Confidence 35689999999976443333334666667777 89999997654 344444443
No 242
>PRK08238 hypothetical protein; Validated
Probab=72.71 E-value=10 Score=34.89 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=41.3
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcE
Q 038498 13 DVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLV 75 (248)
Q Consensus 13 DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~ 75 (248)
++|-..++ +.+.+.+.|++++++ .+++++||.+...+.+.+.. + +-++.+++.++..
T Consensus 65 ~~d~~~lp----~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-l-GlFd~Vigsd~~~ 122 (479)
T PRK08238 65 DLDVATLP----YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-L-GLFDGVFASDGTT 122 (479)
T ss_pred CCChhhCC----CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-c-CCCCEEEeCCCcc
Confidence 55554442 678899999999999 99999999987655544443 1 1157888887743
No 243
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=72.58 E-value=4.8 Score=33.23 Aligned_cols=21 Identities=38% Similarity=0.346 Sum_probs=18.9
Q ss_pred CcccccceEEEEecCCCCCCC
Q 038498 1 MAARKQGLLALFDVDGTLTAP 21 (248)
Q Consensus 1 ~~~~~~~kli~~DlDGTLl~~ 21 (248)
|+..+.+|+++||++|||+..
T Consensus 1 ~~~~~~iravtfD~~~tLl~~ 21 (237)
T KOG3085|consen 1 MAELMRIRAVTFDAGGTLLAT 21 (237)
T ss_pred CCcccceEEEEEeCCCceeec
Confidence 678889999999999999974
No 244
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=72.25 E-value=4.7 Score=33.65 Aligned_cols=30 Identities=20% Similarity=0.117 Sum_probs=27.1
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| +. +|+.+.+.+|+.++.|..+
T Consensus 196 ~~~~~~vGD----~~~~Di~~a~~~G~~~i~v~~G 226 (257)
T TIGR01458 196 PEEAVMIGD----DCRDDVGGAQDCGMRGIQVRTG 226 (257)
T ss_pred hhhEEEECC----CcHHHHHHHHHcCCeEEEECCC
Confidence 889999999 96 9999999999889988654
No 245
>PRK09449 dUMP phosphatase; Provisional
Probab=72.22 E-value=3.5 Score=33.25 Aligned_cols=16 Identities=38% Similarity=0.239 Sum_probs=14.5
Q ss_pred cceEEEEecCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAP 21 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~ 21 (248)
++|+|+||+||||++.
T Consensus 2 ~~k~iiFDlDGTLid~ 17 (224)
T PRK09449 2 KYDWILFDADETLFHF 17 (224)
T ss_pred CccEEEEcCCCchhcc
Confidence 5899999999999974
No 246
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=71.74 E-value=2.8 Score=34.71 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=13.3
Q ss_pred cceEEEEecCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAP 21 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~ 21 (248)
+...|+||||||++++
T Consensus 62 ~p~av~~DIDeTvldn 77 (237)
T PRK11009 62 PPMAVGFDIDDTVLFS 77 (237)
T ss_pred CCcEEEEECcCccccC
Confidence 3459999999999975
No 247
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=71.68 E-value=2.6 Score=33.13 Aligned_cols=31 Identities=16% Similarity=0.055 Sum_probs=27.1
Q ss_pred cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCch
Q 038498 200 FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPE 234 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~ 234 (248)
++++++||| +..|+...+.+|..++++..+.
T Consensus 130 p~e~l~VgD----s~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 130 PAQILFFDD----RTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHHeEEEcC----hhHhHHHHHHhCCEEEEcCCCc
Confidence 789999999 9999999999997777775543
No 248
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=70.41 E-value=12 Score=27.67 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=34.0
Q ss_pred eEEEEecCCCCCCCCC---------CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 8 LLALFDVDGTLTAPRK---------AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 8 kli~~DlDGTLl~~~~---------~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
+++.+|+|+|+-+... .+=+.....|.+|+++ +.+++|+--.-+++.++.-.
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~ 80 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLE 80 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHH
Confidence 5666677777765422 1233457888999999 99999985555555544443
No 249
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=69.84 E-value=3 Score=35.01 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=16.0
Q ss_pred ccceEEEEecCCCCCCCC
Q 038498 5 KQGLLALFDVDGTLTAPR 22 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~ 22 (248)
.+.|.+++|||+||+++.
T Consensus 87 ~~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 87 VGRKTLVLDLDETLVHSS 104 (262)
T ss_pred CCCceEEEeCCCcccccc
Confidence 567999999999999886
No 250
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=69.84 E-value=3.5 Score=34.10 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=24.7
Q ss_pred hccCCEEEEcCCCCCCCCCHHHHhhCCCceEEcc
Q 038498 198 DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVT 231 (248)
Q Consensus 198 ~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~ 231 (248)
.+.+-++++|| +.||+...+.+|+.+++|.
T Consensus 182 ~~~~i~i~vGD----s~~DI~aAk~AGi~~I~V~ 211 (237)
T TIGR01672 182 QDKNIRIHYGD----SDNDITAAKEAGARGIRIL 211 (237)
T ss_pred HhCCCeEEEeC----CHHHHHHHHHCCCCEEEEE
Confidence 33555899999 9999999999997777764
No 251
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=68.89 E-value=5.7 Score=32.68 Aligned_cols=28 Identities=18% Similarity=-0.038 Sum_probs=23.7
Q ss_pred cCCEEEEcCCCCCC-CCCHHHHhhCCCceEEcc
Q 038498 200 FNEIHFFGDKTYKG-GNDHEIFESERTVGHTVT 231 (248)
Q Consensus 200 ~~~~~aiGD~~~~~-~NDi~M~~~~g~~~~av~ 231 (248)
.+++++||| + .+|+.+.+.+|+.++.|.
T Consensus 213 ~~~~~~vGD----~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 213 KNRMLMVGD----SFYTDILGANRLGIDTALVL 241 (242)
T ss_pred cccEEEECC----CcHHHHHHHHHCCCeEEEEe
Confidence 468999999 9 699999999997776653
No 252
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=68.46 E-value=9.8 Score=31.42 Aligned_cols=44 Identities=7% Similarity=0.077 Sum_probs=28.7
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEecC
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSEN 72 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~n 72 (248)
+.+.|+.|+++ ++++|+|+.+...+...+... +...|+.+++..
T Consensus 113 v~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~ 158 (248)
T PLN02770 113 LYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGS 158 (248)
T ss_pred HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecC
Confidence 46677778888 999999999877655444431 223356665544
No 253
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=68.15 E-value=8.9 Score=30.41 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+.+.+.|++|+++ ++++++||.+...+...+.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~ 110 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRARSLLE 110 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHH
Confidence 34567788889988 9999999988766555444
No 254
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=66.80 E-value=7.3 Score=30.75 Aligned_cols=30 Identities=13% Similarity=-0.053 Sum_probs=22.1
Q ss_pred CHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhh
Q 038498 189 DKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 189 ~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
.+...+...++ ++++++||| +.+|+...+.
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD----~~~Di~aA~~ 196 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGD----TVDDIITGRK 196 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeC----CHHHHHHHHh
Confidence 34444555543 789999999 9999988764
No 255
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=66.31 E-value=11 Score=35.43 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=43.3
Q ss_pred cceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 6 QGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
..+.++++.||+++.- ...+-+...++|++|+++ ++++++||.+..........
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 4577889999998744 456788999999999999 99999999987755554443
No 256
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=66.25 E-value=12 Score=29.94 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
+.+.++|+.|+++ +.++++||.+...+...+..
T Consensus 85 ~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~ 118 (214)
T PRK13288 85 ETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL 118 (214)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 3457788889999 99999999987665554443
No 257
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=66.06 E-value=12 Score=29.66 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+.+.++|+.|+++ ++++++|+.+...+...+.
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~ 120 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLARPLLE 120 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 34557788889888 9999999988765544444
No 258
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=66.00 E-value=3.4 Score=33.66 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=16.8
Q ss_pred cccceEEEEecCCCCCCCCC
Q 038498 4 RKQGLLALFDVDGTLTAPRK 23 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~~ 23 (248)
.+...+++||+|-|+++.++
T Consensus 10 ~~~ril~~FDFD~TIid~dS 29 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQDS 29 (256)
T ss_pred cCCcEEEEEecCceeecCCc
Confidence 35678999999999998764
No 259
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=65.68 E-value=6.4 Score=38.92 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=43.3
Q ss_pred CCHHHHHHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHhhhhccC
Q 038498 188 WDKTYCLRYLDD-FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 247 (248)
Q Consensus 188 ~~K~~al~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A~~v~~~ 247 (248)
-.|..-++.+.+ -..+.++|| +.||=..|++|+ .|++...| |..-+|.+..+.
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGD----GANDCgALKaAd-vGISLSea--EASvAApFTSk~ 892 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGD----GANDCGALKAAD-VGISLSEA--EASVAAPFTSKT 892 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCC----Ccchhhhhhhcc-cCcchhhh--hHhhcCccccCC
Confidence 679999999988 557999999 999999999998 99998888 444556665543
No 260
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=65.47 E-value=12 Score=29.88 Aligned_cols=43 Identities=28% Similarity=0.302 Sum_probs=28.7
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-cc--CCCceEEec
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VI--DEYDYVFSE 71 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~--~~~~~~i~~ 71 (248)
+.+.|+.|+++ +.++++|+.+...+...+... +. ..++.+++.
T Consensus 92 ~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 92 AEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP 138 (220)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC
Confidence 45677888888 999999999987655544431 22 235555554
No 261
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=65.05 E-value=3.4 Score=32.15 Aligned_cols=18 Identities=33% Similarity=0.438 Sum_probs=13.7
Q ss_pred ceEEEEecCCCCCCCCCC
Q 038498 7 GLLALFDVDGTLTAPRKA 24 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~ 24 (248)
..=++.|+|||++++.-.
T Consensus 6 ~~~~ciDIDGtit~~~t~ 23 (194)
T COG5663 6 QLRCCIDIDGTITDDPTF 23 (194)
T ss_pred HhheeeccCCceecCccc
Confidence 344789999999987543
No 262
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=64.56 E-value=14 Score=28.32 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc-ccccCCCceEEec
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG-KTVIDEYDYVFSE 71 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~-~~~~~~~~~~i~~ 71 (248)
+.+.+.|+.|+++ ++++++|+.+... ..... ..+...++.++++
T Consensus 88 ~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~ 133 (183)
T TIGR01509 88 PGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFS 133 (183)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEc
Confidence 4567788889888 9999999988765 32222 1123346666554
No 263
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=63.81 E-value=12 Score=30.25 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc-cccCCCceEEe
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK-TVIDEYDYVFS 70 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~-~~~~~~~~~i~ 70 (248)
.+.++|..|+++ ++++++|+++...+...+.. .+...|+.+++
T Consensus 93 gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g 137 (220)
T COG0546 93 GVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG 137 (220)
T ss_pred CHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc
Confidence 457889999999 99999999998765554443 13344556655
No 264
>PF09047 MEF2_binding: MEF2 binding; InterPro: IPR015134 The myocyte enhancer factor-2 (MEF2) binding domain, predominantly found in the calcineurin-binding protein CABIN 1, adopts an amphipathic alpha-helical structure, which allows it to bind a hydrophobic groove on the MEF2S domain, forming a triple-helical interaction. Interaction of this domain with MEF2 causes repression of transcription []. ; PDB: 1N6J_G.
Probab=63.64 E-value=7.2 Score=21.08 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=10.3
Q ss_pred CCCCCCCCCCHHHHHHHHHH
Q 038498 17 TLTAPRKAATPQMLEFMREL 36 (248)
Q Consensus 17 TLl~~~~~i~~~~~~al~~l 36 (248)
||+.+.+.|++++.+-|...
T Consensus 1 tllspkgsiseetkqklk~~ 20 (35)
T PF09047_consen 1 TLLSPKGSISEETKQKLKSA 20 (35)
T ss_dssp -----SS---HHHHHHHHHH
T ss_pred CccCCCCcccHHHHHHHHHH
Confidence 78888899999999988764
No 265
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=61.92 E-value=13 Score=30.50 Aligned_cols=28 Identities=14% Similarity=-0.124 Sum_probs=23.6
Q ss_pred cCCE-EEEcCCCCCCC-CCHHHHhhCCCceEEcc
Q 038498 200 FNEI-HFFGDKTYKGG-NDHEIFESERTVGHTVT 231 (248)
Q Consensus 200 ~~~~-~aiGD~~~~~~-NDi~M~~~~g~~~~av~ 231 (248)
++++ ++||| +. +|+.+.+.+|+.++.|.
T Consensus 205 ~~~~~~~IGD----~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 205 PERRDVMVGD----NLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred CccceEEECC----CcHHHHHHHHHCCCcEEEEe
Confidence 5565 99999 98 89999999997777764
No 266
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=61.70 E-value=15 Score=29.39 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.++|+.|+++ ++++++|+.+...+...+.
T Consensus 98 g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~ 129 (221)
T TIGR02253 98 GVRDTLMELRESGYRLGIITDGLPVKQWEKLE 129 (221)
T ss_pred CHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH
Confidence 456788889999 9999999987655444333
No 267
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=61.40 E-value=17 Score=29.98 Aligned_cols=29 Identities=17% Similarity=0.279 Sum_probs=23.0
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHh
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQL 57 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l 57 (248)
+.+.|+.|+++ ++++|+||.+...+...+
T Consensus 104 ~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l 133 (253)
T TIGR01422 104 VIEVIAYLRARGIKIGSTTGYTREMMDVVA 133 (253)
T ss_pred HHHHHHHHHHCCCeEEEECCCcHHHHHHHH
Confidence 46788889999 999999999977554443
No 268
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=61.13 E-value=15 Score=27.42 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.|+.|+++ ++++++|+++...+...+.
T Consensus 68 g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~ 99 (154)
T TIGR01549 68 GAADLLKRLKEAGIKLGIISNGSLRAQKLLLR 99 (154)
T ss_pred CHHHHHHHHHHCcCeEEEEeCCchHHHHHHHH
Confidence 357888889888 9999999998765444433
No 269
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=60.22 E-value=4.1 Score=30.81 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=21.5
Q ss_pred HHHhhc-cCCEEEEcCCCCCCCCCHHHHhhCC
Q 038498 194 LRYLDD-FNEIHFFGDKTYKGGNDHEIFESER 224 (248)
Q Consensus 194 l~~l~~-~~~~~aiGD~~~~~~NDi~M~~~~g 224 (248)
++.+-. ++++++||| +.+|+.+...+|
T Consensus 108 l~~l~~~p~~~i~i~D----s~~~~~aa~~ng 135 (148)
T smart00577 108 LSLLGRDLSNVIIIDD----SPDSWPFHPENL 135 (148)
T ss_pred HHHcCCChhcEEEEEC----CHHHhhcCccCE
Confidence 444432 899999999 999999988765
No 270
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=59.98 E-value=19 Score=27.65 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=27.4
Q ss_pred cccceEEEEecCCCCCCCCC-CCCHHHHHHHHHHhh
Q 038498 4 RKQGLLALFDVDGTLTAPRK-AATPQMLEFMRELRK 38 (248)
Q Consensus 4 ~~~~kli~~DlDGTLl~~~~-~i~~~~~~al~~l~~ 38 (248)
+..+|++++|=|.|+..+.. .|-+..++.+++++.
T Consensus 40 ~~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~ 75 (190)
T KOG2961|consen 40 RKGIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKA 75 (190)
T ss_pred ccCceEEEEcCCCeeeCCcccccCchhHHHHHHHHH
Confidence 45899999999999997644 577777777777654
No 271
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=57.40 E-value=20 Score=29.97 Aligned_cols=43 Identities=14% Similarity=0.258 Sum_probs=28.4
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEec
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSE 71 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~ 71 (248)
+.+.|+.|+++ +.++|+|+.+...+...+... +...|+.+++.
T Consensus 114 ~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~ 158 (260)
T PLN03243 114 SREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA 158 (260)
T ss_pred HHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec
Confidence 45578888888 999999999876555444431 22335666553
No 272
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=55.47 E-value=22 Score=27.91 Aligned_cols=32 Identities=9% Similarity=0.243 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.++|++|+++ ++++++|+.+...+...+.
T Consensus 95 ~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~ 127 (198)
T TIGR01428 95 PDVPAGLRALKERGYRLAILSNGSPAMLKSLVK 127 (198)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 3457788889988 9999999888765544443
No 273
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=54.48 E-value=11 Score=32.64 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=26.3
Q ss_pred cCCEEEEcCCCCCCC-CCHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGG-NDHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~-NDi~M~~~~g~~~~av~Na 233 (248)
++++++||| .. .|+.+.+.+|..++.|..+
T Consensus 263 ~~~~~mIGD----~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 263 FHALYMVGD----NPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred hheEEEEcC----ChhhhhhhHHhCCceEEEeccc
Confidence 368999999 97 9999999999888888764
No 274
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=54.07 E-value=32 Score=27.39 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 23 KAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 23 ~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
..+-+.+.++|+.|+++ +.++++||.....+.+.+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~ 128 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLE 128 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 34677889999999999 9999999998765554444
No 275
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=52.77 E-value=35 Score=27.36 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.+.|+.|+++ ++++++|+.+...+...+.
T Consensus 95 ~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~ 127 (222)
T PRK10826 95 PGVREALALCKAQGLKIGLASASPLHMLEAVLT 127 (222)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHH
Confidence 3467888889999 9999999988765444433
No 276
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=50.09 E-value=16 Score=28.32 Aligned_cols=21 Identities=14% Similarity=0.295 Sum_probs=18.6
Q ss_pred cCCEEEEcCCCCCCC--------CCHHHHhhCC
Q 038498 200 FNEIHFFGDKTYKGG--------NDHEIFESER 224 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~--------NDi~M~~~~g 224 (248)
++++++||| +. +|+...+.+|
T Consensus 127 ~~~~v~VGD----~~~~~~~~~~~Di~aA~~aG 155 (166)
T TIGR01664 127 MTRSFYVGD----AAGRKLDFSDADIKFAKNLG 155 (166)
T ss_pred chhcEEEEC----CCCCCCCCchhHHHHHHHCC
Confidence 688999999 75 5999999988
No 277
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=48.80 E-value=37 Score=28.25 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.|+.|+++ +.++|+||.+...+...+.
T Consensus 105 g~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~ 136 (267)
T PRK13478 105 GVLEVIAALRARGIKIGSTTGYTREMMDVVVP 136 (267)
T ss_pred CHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHH
Confidence 346788899999 9999999998876544443
No 278
>PLN02940 riboflavin kinase
Probab=48.71 E-value=30 Score=30.77 Aligned_cols=44 Identities=9% Similarity=0.265 Sum_probs=30.1
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHhc-c-cccCCCceEEecC
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQLG-K-TVIDEYDYVFSEN 72 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~-~-~~~~~~~~~i~~n 72 (248)
+.+.|+.|+++ ++++|+|+.+...+...+. . .+...++.+++..
T Consensus 98 v~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d 144 (382)
T PLN02940 98 ANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGD 144 (382)
T ss_pred HHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehh
Confidence 46688889999 9999999998776655543 1 1233466665543
No 279
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=48.13 E-value=58 Score=27.28 Aligned_cols=61 Identities=28% Similarity=0.361 Sum_probs=31.8
Q ss_pred HHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEeecccccchHHHHHHHHHH
Q 038498 31 EFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFT 104 (248)
Q Consensus 31 ~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~ 104 (248)
+.|++.++. ..+++.||=+...+.+.|.. .|++|- |+.+.++|.+ .++++.+.++++.+.+
T Consensus 190 ~~l~~vr~~~~~PVlvGSGvt~~Ni~~~l~~-----ADG~IV--GS~~K~~G~~------~n~VD~~Rv~~fm~~v 252 (254)
T PF03437_consen 190 EKLKRVREAVPVPVLVGSGVTPENIAEYLSY-----ADGAIV--GSYFKKDGKW------ENPVDPERVRRFMEAV 252 (254)
T ss_pred HHHHHHHhcCCCCEEEecCCCHHHHHHHHHh-----CCEEEE--eeeeeeCCEe------CCcCCHHHHHHHHHHh
Confidence 334444444 56666666666666665553 233322 3344444544 2245777777766654
No 280
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=48.10 E-value=32 Score=28.85 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.+.|+.|+++ ++++++||.+...+...+.
T Consensus 104 ~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~ 136 (272)
T PRK13223 104 PGVRDTLKWLKKQGVEMALITNKPERFVAPLLD 136 (272)
T ss_pred CCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHH
Confidence 3457788889888 9999999988765544443
No 281
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=47.92 E-value=15 Score=27.38 Aligned_cols=42 Identities=21% Similarity=0.346 Sum_probs=35.7
Q ss_pred CCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 18 LTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 18 Ll~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
++-+.+.|-..+++.+++..++ -.+.++.|++...+.++...
T Consensus 3 ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~ 45 (129)
T PF02670_consen 3 ILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQARE 45 (129)
T ss_dssp EESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHH
Confidence 4556777888999999999999 88888889999988888886
No 282
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=47.75 E-value=35 Score=28.74 Aligned_cols=32 Identities=19% Similarity=0.445 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.+.|+.|+++ ++++|+|+.+...+...+.
T Consensus 145 pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~ 177 (273)
T PRK13225 145 PGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQ 177 (273)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 4557788888888 9999999988765554444
No 283
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=47.51 E-value=42 Score=29.42 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHH
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQ 56 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~ 56 (248)
.+.+.+.|++|+++ ++++|+|+.+.......
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~i 217 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKG 217 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 77889999999999 99999999998754433
No 284
>PRK11590 hypothetical protein; Provisional
Probab=47.09 E-value=80 Score=25.18 Aligned_cols=70 Identities=16% Similarity=0.070 Sum_probs=37.3
Q ss_pred HHHH-HHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEeecccccchHHHHHHHHHH
Q 038498 30 LEFM-RELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFT 104 (248)
Q Consensus 30 ~~al-~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~ 104 (248)
.+.| +.++++ ++++++||.+..-+.+.+...-....+.+||..= .+...|+..-... ...+.+.++-+.+
T Consensus 101 ~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l-~~~~tg~~~g~~c----~g~~K~~~l~~~~ 172 (211)
T PRK11590 101 QERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQM-QRRYGGWVLTLRC----LGHEKVAQLERKI 172 (211)
T ss_pred HHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEE-EEEEccEECCccC----CChHHHHHHHHHh
Confidence 5556 345566 8999999998765444333210011245665542 2233555533332 3567777666655
No 285
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=46.95 E-value=29 Score=26.63 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=15.9
Q ss_pred HHHHHHHHhhc-CeEEEEcCC
Q 038498 29 MLEFMRELRKV-VTVGVVGGS 48 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR 48 (248)
+.+.|+.|+++ +.++++|++
T Consensus 93 ~~~~l~~l~~~g~~i~i~S~~ 113 (185)
T TIGR02009 93 IENFLKRLKKKGIAVGLGSSS 113 (185)
T ss_pred HHHHHHHHHHcCCeEEEEeCc
Confidence 45677788888 889999987
No 286
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=46.67 E-value=27 Score=35.29 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHH
Q 038498 24 AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQ 56 (248)
Q Consensus 24 ~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~ 56 (248)
++-+++.++|++++++ ++++++|||++......
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~i 601 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAI 601 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 3466889999999999 99999999998765443
No 287
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=46.15 E-value=99 Score=24.81 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=37.5
Q ss_pred HHHHHHHH-HHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEeecccccchHHHHHHHHHH
Q 038498 27 PQMLEFMR-ELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFT 104 (248)
Q Consensus 27 ~~~~~al~-~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~~i~~~~~~~i~~~~ 104 (248)
+.+.+.|+ .++++ +.++|+|+.+...+.+.....-....+.+||.+ ..+.+.|+..-.. +...+.+.++-+.+
T Consensus 97 pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~-le~~~gg~~~g~~----c~g~~Kv~rl~~~~ 171 (210)
T TIGR01545 97 PLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQ-IERGNGGWVLPLR----CLGHEKVAQLEQKI 171 (210)
T ss_pred ccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEE-eEEeCCceEcCcc----CCChHHHHHHHHHh
Confidence 44567774 56667 999999999865544443220000113455433 2221223332211 34567777666655
No 288
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=45.74 E-value=36 Score=27.59 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEe
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFS 70 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~ 70 (248)
+.+.+.|+.|+++ ++++++|+.+...+...+... +...|+.+++
T Consensus 96 ~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~ 141 (224)
T PRK14988 96 EDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLS 141 (224)
T ss_pred CCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEE
Confidence 3457889999999 999999998766554444321 2223555543
No 289
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=45.21 E-value=34 Score=30.46 Aligned_cols=43 Identities=12% Similarity=0.264 Sum_probs=28.4
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEe
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFS 70 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~ 70 (248)
.+.+.|+.|+++ ++++|+|+++...+...+... +..-|+.+++
T Consensus 220 Ga~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~ 264 (381)
T PLN02575 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVA 264 (381)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEe
Confidence 345678888888 999999999977655444431 2233555554
No 290
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=44.70 E-value=24 Score=30.37 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=31.3
Q ss_pred CCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEE
Q 038498 188 WDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHT 229 (248)
Q Consensus 188 ~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~a 229 (248)
-+|...++.+++ ++++++||| +..|+.+.+.+. ..+.
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD----~~~d~~~~~~~l-p~~~ 127 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDD----NPAERANVKITL-PVKT 127 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECC----CHHHHHHHHHHC-CCCc
Confidence 479999999986 899999999 999999999865 4443
No 291
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=44.10 E-value=37 Score=26.44 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.|+.|+++ +.++|+||.....+...+.
T Consensus 84 g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 115 (201)
T TIGR01491 84 YAEELVRWLKEKGLKTAIVSGGIMCLAKKVAE 115 (201)
T ss_pred cHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 346778888888 9999999998665444443
No 292
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=43.85 E-value=43 Score=26.58 Aligned_cols=43 Identities=19% Similarity=0.296 Sum_probs=25.1
Q ss_pred HHHHHHHHhhcCeEEEEcCCChHHHHHHhccc-ccCCCceEEec
Q 038498 29 MLEFMRELRKVVTVGVVGGSDLSKISEQLGKT-VIDEYDYVFSE 71 (248)
Q Consensus 29 ~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~ 71 (248)
+.+.|++|++++.++++|+.+...+...+... +...++.++++
T Consensus 102 ~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~ 145 (224)
T TIGR02254 102 AFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVS 145 (224)
T ss_pred HHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEc
Confidence 45566666655888889988766554444431 22335555443
No 293
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=43.39 E-value=33 Score=27.38 Aligned_cols=20 Identities=40% Similarity=0.353 Sum_probs=17.1
Q ss_pred ccceEEEEecCCCCCCCCCC
Q 038498 5 KQGLLALFDVDGTLTAPRKA 24 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~ 24 (248)
+.+|+|+||+||||++....
T Consensus 2 ~~~k~i~FD~d~TL~d~~~~ 21 (229)
T COG1011 2 MMIKAILFDLDGTLLDFDSA 21 (229)
T ss_pred CceeEEEEecCCcccccchH
Confidence 46899999999999998654
No 294
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=43.38 E-value=47 Score=26.88 Aligned_cols=30 Identities=13% Similarity=0.059 Sum_probs=22.2
Q ss_pred HHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 29 MLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.|+.|+++ +.++++|+.+.......+.
T Consensus 100 ~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~ 130 (229)
T PRK13226 100 VEGMLQRLECAGCVWGIVTNKPEYLARLILP 130 (229)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 45688888888 9999999988664443333
No 295
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=42.99 E-value=45 Score=27.99 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=28.6
Q ss_pred eEEEEecCCCCCCCCCC-C-------------------------CHHHHHHHHHHhh------c-CeEEEEcCCChHH
Q 038498 8 LLALFDVDGTLTAPRKA-A-------------------------TPQMLEFMRELRK------V-VTVGVVGGSDLSK 52 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~-i-------------------------~~~~~~al~~l~~------~-~~v~iaTGR~~~~ 52 (248)
-=|+||-|+.|..+... + -.....+|.++++ . +++.++|.|+-+.
T Consensus 122 lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apa 199 (264)
T PF06189_consen 122 LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPA 199 (264)
T ss_pred eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCch
Confidence 34799999999975321 1 1123444444433 2 7899999998763
No 296
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=42.68 E-value=38 Score=27.21 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
.+.+.+.|+.++++ ++++|+||.....+.+.+..
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH
Confidence 44557788888889 99999999987666555554
No 297
>PLN02811 hydrolase
Probab=42.27 E-value=57 Score=26.11 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=25.0
Q ss_pred CCCHHHHHHHHHHhhc-CeEEEEcCCChHHH
Q 038498 24 AATPQMLEFMRELRKV-VTVGVVGGSDLSKI 53 (248)
Q Consensus 24 ~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~ 53 (248)
.+-+.+.+.|+.|+++ ++++++||.+...+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 3457889999999999 99999999886543
No 298
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=41.97 E-value=53 Score=25.13 Aligned_cols=23 Identities=13% Similarity=0.356 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCCh
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDL 50 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~ 50 (248)
.+.++|+.|+++ +.++++|+...
T Consensus 91 g~~~~L~~L~~~g~~~~i~s~~~~ 114 (185)
T TIGR01990 91 GIKNLLDDLKKNNIKIALASASKN 114 (185)
T ss_pred cHHHHHHHHHHCCCeEEEEeCCcc
Confidence 335567888888 88888887643
No 299
>PRK11587 putative phosphatase; Provisional
Probab=41.87 E-value=51 Score=26.35 Aligned_cols=16 Identities=44% Similarity=0.544 Sum_probs=14.6
Q ss_pred cceEEEEecCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAP 21 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~ 21 (248)
++|+|+||+||||+++
T Consensus 2 ~~k~viFDlDGTL~Ds 17 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS 17 (218)
T ss_pred CCCEEEEcCCCCcCcC
Confidence 6799999999999985
No 300
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=41.86 E-value=20 Score=27.41 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=13.0
Q ss_pred EEEEecCCCCCCCCC
Q 038498 9 LALFDVDGTLTAPRK 23 (248)
Q Consensus 9 li~~DlDGTLl~~~~ 23 (248)
+|+||+||||+++..
T Consensus 1 ~viFD~DGTL~D~~~ 15 (175)
T TIGR01493 1 AMVFDVYGTLVDVHG 15 (175)
T ss_pred CeEEecCCcCcccHH
Confidence 489999999999864
No 301
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=40.15 E-value=48 Score=31.04 Aligned_cols=55 Identities=18% Similarity=0.316 Sum_probs=42.8
Q ss_pred ccceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcc
Q 038498 5 KQGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~ 59 (248)
+..+.+++..||+++.. ...+-+...++|+.|+++ ++++++||.+.......+..
T Consensus 362 ~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 362 QGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred CCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 34577888899988754 456788999999999887 79999999998755544443
No 302
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=40.06 E-value=18 Score=32.23 Aligned_cols=25 Identities=20% Similarity=0.126 Sum_probs=19.9
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHH
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQM 29 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~ 29 (248)
+++.++.||||+||++-.....++.
T Consensus 25 ~~i~~~GfdmDyTL~~Y~~~~~esL 49 (424)
T KOG2469|consen 25 ENIGIVGFDMDYTLARYNLPEMESL 49 (424)
T ss_pred hcCcEEeeccccchhhhcccchHHH
Confidence 6789999999999998866544443
No 303
>PLN02954 phosphoserine phosphatase
Probab=39.40 E-value=48 Score=26.48 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+.+.+.|+.++++ +.++|+||.....+...+.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~ 119 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAA 119 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 35667788888888 9999999998765554444
No 304
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=39.38 E-value=90 Score=25.50 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=36.6
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~ 59 (248)
-.++.+|+||+.+....+.|.+..=.+.-.+.+ +.-++-|=-++......++.
T Consensus 53 ~dlv~vd~dG~~ieg~~kpssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~ 107 (228)
T PRK12348 53 DDMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGL 107 (228)
T ss_pred HHEEEECCCCCCCCCCCCCCccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC
Confidence 468999999999976556666654444444444 88888887777766665553
No 305
>PRK03971 putative deoxyhypusine synthase; Provisional
Probab=38.87 E-value=71 Score=27.91 Aligned_cols=64 Identities=19% Similarity=0.244 Sum_probs=45.4
Q ss_pred CCCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcccccCCCceEEecCCcEEEeCC-cEEEEeecc
Q 038498 22 RKAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGKTVIDEYDYVFSENGLVAHKDG-KLIGTQSLK 89 (248)
Q Consensus 22 ~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~~~~~~~~~~i~~nGa~i~~~~-~~i~~~~~~ 89 (248)
.+-++...++.|..|.++ +.+++.||-.+. ++.+-++.+..+.+ ..+|..+.+.| ..+....+|
T Consensus 75 g~misaGlr~~i~~Li~~~~Vd~iVtTganlehDi~~~l~~~~~G~f----~~dd~~Lr~~ginRIgnv~ip 142 (334)
T PRK03971 75 SNIVSSGLREIIAYLVKEKKVDVIVTTAGGVEEDFIKCLKPFILGEW----DVDGAELREKGINRIGNIFVP 142 (334)
T ss_pred ccccchhHHHHHHHHHHcCCeeEEEeCCCchHHHHHHHhcccccCCC----CCCHHHHHHcCCCccceeeeC
Confidence 455788899999999888 999999999987 68888875432222 35666666544 555666554
No 306
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=38.77 E-value=20 Score=33.11 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=15.3
Q ss_pred ceEEEEecCCCCCCCCCCC
Q 038498 7 GLLALFDVDGTLTAPRKAA 25 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i 25 (248)
.+.+++|+||||+.+.+..
T Consensus 50 ~~t~v~d~~g~Ll~s~s~F 68 (525)
T PLN02588 50 NHTLIFNVEGALLKSNSLF 68 (525)
T ss_pred cceEEEecccceeccCCCC
Confidence 4569999999999876543
No 307
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=37.95 E-value=51 Score=30.72 Aligned_cols=52 Identities=17% Similarity=0.234 Sum_probs=39.0
Q ss_pred eEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-C-eEEEEcCCChHHHHHHhcc
Q 038498 8 LLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-V-TVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 8 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~-~v~iaTGR~~~~~~~~l~~ 59 (248)
..++.-.||++... ...+-+...++|++|+++ + +++++||.+.......+..
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~ 399 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE 399 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH
Confidence 45566677777643 345778899999999999 9 9999999998755544443
No 308
>PF06183 DinI: DinI-like family; InterPro: IPR010391 This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity []. The structure of DinI is known [].; PDB: 1GHH_A.
Probab=37.46 E-value=93 Score=20.05 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=25.1
Q ss_pred chHHHHHHHHHHcCCceEEEEecCceEEEEeeCCCC-HHHHHHH
Q 038498 154 IRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD-KTYCLRY 196 (248)
Q Consensus 154 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~di~~~~~~-K~~al~~ 196 (248)
...++.+++...||+..+.+..++...+.+.-..-+ |....+.
T Consensus 9 L~~EL~kRl~~~yPd~~v~Vr~~s~~~l~v~g~~~~~k~~i~~i 52 (65)
T PF06183_consen 9 LESELTKRLHRQYPDAEVRVRPGSANGLSVSGGKKDDKERIEEI 52 (65)
T ss_dssp HHHHHHHHHHHH-SS-EEEEEEESS-EEEEES--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEeeeecccCccccCCcCchHHHHHHHH
Confidence 345777899999998777666556778887765443 4333333
No 309
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=36.98 E-value=19 Score=31.61 Aligned_cols=19 Identities=26% Similarity=0.217 Sum_probs=16.7
Q ss_pred ccceEEEEecCCCCCCCCC
Q 038498 5 KQGLLALFDVDGTLTAPRK 23 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~ 23 (248)
+++++|-||||.||+.-..
T Consensus 10 ~~i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 10 EKIQVFGFDMDYTLAQYKS 28 (343)
T ss_pred ccCCEEEECccccccccCh
Confidence 5789999999999998754
No 310
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=36.49 E-value=58 Score=29.61 Aligned_cols=43 Identities=7% Similarity=0.039 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhccc-ccCCCceEEe
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKT-VIDEYDYVFS 70 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~-~~~~~~~~i~ 70 (248)
.+.+.|+.|+++ ++++|+|+.+...+...+... +..-|+.+++
T Consensus 334 G~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~ 378 (459)
T PRK06698 334 NVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFS 378 (459)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEe
Confidence 346788888888 999999999987766666541 2223455544
No 311
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=36.36 E-value=69 Score=25.93 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=33.2
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~ 58 (248)
..++.+|+||+++....+.|.++.-.+.-.+.+ +..++-|=-++......++
T Consensus 60 ~div~vd~~G~~~~g~~~ps~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~ 113 (221)
T PRK06557 60 EDMVVVDLDGNVVEGDLKPSSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARG 113 (221)
T ss_pred HHEEEEcCCCCCcCCCCCCCccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhC
Confidence 357999999999976555666554333333443 7778877666655544444
No 312
>PF12611 DUF3766: Protein of unknown function (DUF3766); InterPro: IPR013367 Proteins in this entry are encoded in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function of this protein is unknown.
Probab=35.01 E-value=20 Score=18.27 Aligned_cols=12 Identities=8% Similarity=0.177 Sum_probs=9.4
Q ss_pred eEEEEecCCCCC
Q 038498 8 LLALFDVDGTLT 19 (248)
Q Consensus 8 kli~~DlDGTLl 19 (248)
-=||+.+||+++
T Consensus 13 ~nvFTNIDsaVi 24 (24)
T PF12611_consen 13 ENVFTNIDSAVI 24 (24)
T ss_pred cCceeccccccC
Confidence 458999999864
No 313
>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]
Probab=34.87 E-value=77 Score=27.32 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcccccCCCceEE---ecCCcEEEeCC-cEEEEeecc
Q 038498 23 KAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGKTVIDEYDYVF---SENGLVAHKDG-KLIGTQSLK 89 (248)
Q Consensus 23 ~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~~~~~~~~~~i---~~nGa~i~~~~-~~i~~~~~~ 89 (248)
+-++...++.|..|.++ +.+++.||-++. ++.+.++.. ++. ..++..+.++| ..+..-.+|
T Consensus 64 ~~vssGlR~iia~LIr~~~idvvVTTgg~l~hDi~~~lg~~------~~~G~~~~dD~~Lr~~gi~RIgnv~vp 131 (318)
T COG1899 64 NLVSSGLREIIADLIRNGLIDVVVTTGGNLDHDIIKALGGP------HYCGSFEVDDVELREEGINRIGNVFVP 131 (318)
T ss_pred cccchhHHHHHHHHHHcCCeEEEEecCCchhHHHHHHcCCC------eeccCcCCCHHHHHHhccccccceecC
Confidence 34577789999999888 999999999986 688888841 221 23444444433 455555554
No 314
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=34.47 E-value=60 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.+.|+.|+++ ++++++||.....+...+.
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 120 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKD 120 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 45678889999999 9999999987655444333
No 315
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=34.13 E-value=65 Score=25.73 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
.+.+.+.|+.++++ +.++|+||.....+.+.+..
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~ 106 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG 106 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh
Confidence 44557888888888 99999999976655554443
No 316
>PF01994 Trm56: tRNA ribose 2'-O-methyltransferase, aTrm56; InterPro: IPR002845 This entry represents tRNA ribose 2'-O-methyltransferase aTrm56, which specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs. The crystal structure of Pyrococcus horikoshii aTrm56 complexed with S-adenosyl-L-methionine has been determined to 2.48 A resolution. aTrm56 consists of the SPOUT domain, which contains the characteristic deep trefoil knot, and a unique C-terminal beta-hairpin []. A conserved cytidine at position 56 of tRNA contributes to the maintenance of the L-shaped tertiary structure. aTrm56 catalyzes the 2'-O-methylation of the cytidine residue in archaeal tRNA, using S-adenosyl-L-methionine. Biochemical assays showed that aTrm56 forms a dimer and prefers the L-shaped tRNA to the lambda form as its substrate [, ].; GO: 0008175 tRNA methyltransferase activity, 0002128 tRNA nucleoside ribose methylation, 0005737 cytoplasm; PDB: 2YY8_A 2O3A_B.
Probab=33.79 E-value=69 Score=23.38 Aligned_cols=60 Identities=10% Similarity=0.106 Sum_probs=39.7
Q ss_pred eEEEEeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhh
Q 038498 179 ISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKAL 243 (248)
Q Consensus 179 ~~~di~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~ 243 (248)
..+-++..|.+=...+..+.+ .+-.+.+|= ..---+..+.|. +-++|+| ++.++.++|=+
T Consensus 26 ~VVHLTMYG~~i~dvi~~Ir~~~~~~lvVVGa----eKVP~evYe~AD-yNVaVgnQPHSEVAALAvF 88 (120)
T PF01994_consen 26 KVVHLTMYGENIDDVIDEIRESCKDLLVVVGA----EKVPGEVYELAD-YNVAVGNQPHSEVAALAVF 88 (120)
T ss_dssp EEEEE-TTSEEHHHCHHHHHHCTSEEEEEE-S----S---CCHHHHSS-EEEESSSS---HHHHHHHH
T ss_pred eEEEEEecCCchHHHHHHHhccCCCEEEEECC----CcCCHHHHhhCC-cceeeCCCChHHHHHHHHH
Confidence 344455556666667777774 455788899 888889999999 9999999 89999998854
No 317
>COG1303 Uncharacterized protein conserved in archaea [Function unknown]
Probab=33.43 E-value=2.1e+02 Score=22.14 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=43.7
Q ss_pred EeeCCCCHHHHHHHhhc--cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC-chhhHHHHhhhh
Q 038498 183 VFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS-PEDTMEKCKALF 244 (248)
Q Consensus 183 i~~~~~~K~~al~~l~~--~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N-a~~~~k~~A~~v 244 (248)
++..|.+=-.-+..+.+ .+-.+..|- ..-=.+..+.|. +.++|+| ++.++.++|=+.
T Consensus 84 LTMYG~~i~dv~~ei~~~~k~~lvvVGa----eKVp~evYelAD-yNV~VgnQPHSEVaaLAvFL 143 (179)
T COG1303 84 LTMYGLNIDDVIDEIRESKKDVLVVVGA----EKVPGEVYELAD-YNVSVGNQPHSEVAALAVFL 143 (179)
T ss_pred EEecCCcchhhhHHHHhcCCcEEEEEcc----ccCCHHHhhhcc-cceecCCCccHHHHHHHHHH
Confidence 44445555555666766 445888899 999999999999 9999999 888999988543
No 318
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=32.88 E-value=81 Score=24.67 Aligned_cols=24 Identities=25% Similarity=0.648 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCCh
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDL 50 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~ 50 (248)
+.+.++|+.|+++ ++++++|+.+.
T Consensus 108 ~g~~~~l~~L~~~g~~~~i~Sn~~~ 132 (203)
T TIGR02252 108 PDAIKLLKDLRERGLILGVISNFDS 132 (203)
T ss_pred cCHHHHHHHHHHCCCEEEEEeCCch
Confidence 4457788889888 99999998654
No 319
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=32.81 E-value=91 Score=25.13 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=33.8
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~ 59 (248)
..++.+|+||..+....+.|.++.=.+.-.+.+ +..++.|=-++.......+.
T Consensus 55 ~div~vd~~g~~i~g~~~ps~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~ 109 (214)
T PRK06833 55 EDIVIMDLDGKVVEGERKPSSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW 109 (214)
T ss_pred HHEEEEcCCCCCcCCCCCCCccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC
Confidence 468899999999976555666654444444444 77777775555555444443
No 320
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=32.63 E-value=73 Score=24.14 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 27 PQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 27 ~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
+.+.+.|+.++++ +.++++||.....+...+.
T Consensus 76 ~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~ 108 (177)
T TIGR01488 76 PGARELISWLKERGIDTVIVSGGFDFFVEPVAE 108 (177)
T ss_pred cCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 4567788888888 9999999988665544444
No 321
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=32.53 E-value=1.3e+02 Score=21.26 Aligned_cols=58 Identities=24% Similarity=0.310 Sum_probs=34.3
Q ss_pred HHHHHH-cCCceEEEEecCceEEEEeeCCC--CHHHHHHHhhc--c-CCEEEEcCCCCCCC-CCHHHHh
Q 038498 160 SVLREK-FAHLNLTFSIGGQISFDVFPQGW--DKTYCLRYLDD--F-NEIHFFGDKTYKGG-NDHEIFE 221 (248)
Q Consensus 160 ~~l~~~-~~~~~~~~~~~~~~~~di~~~~~--~K~~al~~l~~--~-~~~~aiGD~~~~~~-NDi~M~~ 221 (248)
+.+... +|.=.+.....+.....++..+. .|-..|+++++ + .+.+.||| ++ -|.+.-.
T Consensus 18 ~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGD----sgq~DpeiY~ 82 (100)
T PF09949_consen 18 DFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGD----SGQHDPEIYA 82 (100)
T ss_pred HHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEee----CCCcCHHHHH
Confidence 344333 55323333322344444544444 79999999998 4 47999999 65 4655443
No 322
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=32.27 E-value=61 Score=26.51 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=26.3
Q ss_pred ccceEEEEecCCCCCCCCCCCCHHHHHHHHHHhh
Q 038498 5 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRK 38 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~ 38 (248)
.+..+..||+||||+++..-....+.+.+.+..+
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk 41 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGK 41 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCC
Confidence 4578899999999998866566667777777643
No 323
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=31.92 E-value=82 Score=30.76 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=41.2
Q ss_pred ccceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 5 KQGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 5 ~~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
...+.+++=.||+++.- ...+-+...++|++|++. +++++.||.+.........
T Consensus 546 ~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~ 603 (741)
T PRK11033 546 AGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAG 603 (741)
T ss_pred CCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 34567777788887632 345788899999999999 9999999998875544443
No 324
>PRK02301 putative deoxyhypusine synthase; Provisional
Probab=31.86 E-value=83 Score=27.27 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=49.1
Q ss_pred ecCCCCC--CCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcc-cccCCCceEEecCCcEEEeCC-cEEEE
Q 038498 13 DVDGTLT--APRKAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGK-TVIDEYDYVFSENGLVAHKDG-KLIGT 85 (248)
Q Consensus 13 DlDGTLl--~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~-~~~~~~~~~i~~nGa~i~~~~-~~i~~ 85 (248)
|-|+|+. -+.+-++...++.|..|.++ +.+++.||-.+. ++.+-++. ++...+ ..++..+.+.| ..+..
T Consensus 55 ~~~~~ifL~~tg~mvsaGlr~ii~~Li~~~~VD~iVtTganiehD~~~~lg~~~y~G~~----~~dd~~Lr~~ginRIgd 130 (316)
T PRK02301 55 DDDVTKFFGLAGAMVPAGMRGIVSDLIRDGHIDVLVTTGANLTHDVIEAIGGHHHHGTA----HAHDEELRDEGIDRIYD 130 (316)
T ss_pred CCCCeEEEEcccchhHHHHHHHHHHHHHcCCeeEEEcCCCchHHHHHHHcCCCeeccCC----CCCHHHHHHcCCCccce
Confidence 3445543 23455788899999999888 999999999987 68888873 222211 24666666544 56666
Q ss_pred eecc
Q 038498 86 QSLK 89 (248)
Q Consensus 86 ~~~~ 89 (248)
..+|
T Consensus 131 ~~ip 134 (316)
T PRK02301 131 VYLP 134 (316)
T ss_pred eCCC
Confidence 6664
No 325
>TIGR00321 dhys deoxyhypusine synthase. This family of apparent orthologs has an unusual UPGMA difference tree, in which the members from the archaea M. jannaschii and P. horikoshii cluster with the known eukaryotic deoxyhypusine synthases. Separated by a fairly deep branch, although still strongly related, is a small cluster of proteins from Methanobacterium thermoautotrophicum and Archeoglobus fulgidus, the latter of which has two.
Probab=31.75 E-value=95 Score=26.72 Aligned_cols=64 Identities=20% Similarity=0.315 Sum_probs=45.0
Q ss_pred CCCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcccccCCCceEEecCCcEEEeCC-cEEEEeecc
Q 038498 22 RKAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGKTVIDEYDYVFSENGLVAHKDG-KLIGTQSLK 89 (248)
Q Consensus 22 ~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~~~~~~~~~~i~~nGa~i~~~~-~~i~~~~~~ 89 (248)
.+-++...++.|..|.++ +.+++.||-.+. ++.+-++......+ ..++..+.+.| ..+....+|
T Consensus 54 g~mvsaGlr~ii~~Li~~g~Vd~ivtTganl~hD~~~~~g~~~~g~f----~~dd~~Lr~~ginRI~dv~ip 121 (301)
T TIGR00321 54 GNLVPSGMREIIAYLIQHGMIDALVTTGANLEHDLIEALGPTHLGDF----AVDDKKLREEGINRIGDVFVP 121 (301)
T ss_pred cccchhhHHHHHHHHHHcCCeeEEEeCCCchHHHHHHHcCcccccCC----CCChHHHHHcCCCccceecCC
Confidence 345678889999999888 999999999987 68888875321211 23566555544 566666664
No 326
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=31.68 E-value=92 Score=23.68 Aligned_cols=49 Identities=20% Similarity=0.289 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHhhcCeEEEEcCC--ChHH-------HHHHhcccccCCCceEEecCCcEE
Q 038498 26 TPQMLEFMRELRKVVTVGVVGGS--DLSK-------ISEQLGKTVIDEYDYVFSENGLVA 76 (248)
Q Consensus 26 ~~~~~~al~~l~~~~~v~iaTGR--~~~~-------~~~~l~~~~~~~~~~~i~~nGa~i 76 (248)
-+-..+++++|.+...|.|+|.. .+.+ +.+.++. +..-+.+.|.|-..+
T Consensus 70 ~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPF--i~~qn~vfCgnKniv 127 (180)
T COG4502 70 QPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPF--ISYQNIVFCGNKNIV 127 (180)
T ss_pred cccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCC--CChhhEEEecCCCeE
Confidence 44567788888887777777766 3332 4455553 222235666665544
No 327
>TIGR00259 thylakoid_BtpA membrane complex biogenesis protein, BtpA family. Members of this family are found in C. elegans, Synechocystis sp., E. coli, and several of the Archaea. Members in Cyanobacteria have been shown to play a role in protein complex biogenesis, and designated BtpA (biogenesis of thylakoid protein). Homologs in non-photosynthetic species, where thylakoid intracytoplasmic membranes are lacking, are likely to act elsewhere in membrane protein biogenesis.
Probab=31.02 E-value=2.5e+02 Score=23.54 Aligned_cols=80 Identities=21% Similarity=0.328 Sum_probs=44.2
Q ss_pred cCCCCCCCC---CCCCHHHHHHHHHHhhcCeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEeeccc
Q 038498 14 VDGTLTAPR---KAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKS 90 (248)
Q Consensus 14 lDGTLl~~~---~~i~~~~~~al~~l~~~~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~ 90 (248)
-||-++... ...+.+.++.+++......++++||=+...+.+.+.. +|+++...+ +-.+|++. .
T Consensus 172 aDavivtG~~TG~~~d~~~l~~vr~~~~~~PvllggGvt~eNv~e~l~~-----adGviVgS~--~K~~G~~~--n---- 238 (257)
T TIGR00259 172 ADAVILSGKTTGTEVDLELLKLAKETVKDTPVLAGSGVNLENVEELLSI-----ADGVIVATT--IKKDGVFN--N---- 238 (257)
T ss_pred CCEEEECcCCCCCCCCHHHHHHHHhccCCCeEEEECCCCHHHHHHHHhh-----CCEEEECCC--cccCCccC--C----
Confidence 355555332 2244444444433111167888898888888777773 457766444 33455531 1
Q ss_pred ccchHHHHHHHHHHHH
Q 038498 91 FLGGEKLKEFINFTLH 106 (248)
Q Consensus 91 ~i~~~~~~~i~~~~~~ 106 (248)
.++.+.++++.+.+.+
T Consensus 239 ~~D~~rV~~Fm~~v~~ 254 (257)
T TIGR00259 239 FVDQARVSQFVEKVAH 254 (257)
T ss_pred CcCHHHHHHHHHHHHH
Confidence 2366777777665543
No 328
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=30.89 E-value=95 Score=22.13 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 25 ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 25 i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+++++++++.++++ .+++..|+.+-+.+.+.-.
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~~ad 92 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTLAREAD 92 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHHHhCC
Confidence 478899999999999 9999999998777766444
No 329
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=30.87 E-value=94 Score=25.18 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=28.9
Q ss_pred EEEecCCCCCCCCCCCC--------------HHHHHHHHHHhhc--CeEEEEcCCCh
Q 038498 10 ALFDVDGTLTAPRKAAT--------------PQMLEFMRELRKV--VTVGVVGGSDL 50 (248)
Q Consensus 10 i~~DlDGTLl~~~~~i~--------------~~~~~al~~l~~~--~~v~iaTGR~~ 50 (248)
+.+|++|++.+.....+ .+..++|+++.+. ++.++.++-+.
T Consensus 1 l~i~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~ 57 (222)
T cd07018 1 LVLDLSGSLVEQPPPSPPLLLGGGESSELSLRDLLEALEKAAEDDRIKGIVLDLDGL 57 (222)
T ss_pred CEEcCCCcccccCCCCChhhhccCCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCC
Confidence 36899999987654322 4568888888765 77777776654
No 330
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=30.21 E-value=2.2e+02 Score=23.78 Aligned_cols=81 Identities=21% Similarity=0.244 Sum_probs=42.7
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEeCCcEEEEeeccc
Q 038498 13 DVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKS 90 (248)
Q Consensus 13 DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~i~~~~~~~ 90 (248)
+-|+-++.-...=++...+.|+..++. ..+.+-||=++..+..+|.. .|++|. |+.+..+|+.+ .
T Consensus 177 ~aDaVI~tG~~TG~~~d~~el~~a~~~~~~pvlvGSGv~~eN~~~~l~~-----adG~Iv--gT~lK~~G~~~--n---- 243 (263)
T COG0434 177 LADAVIVTGSRTGSPPDLEELKLAKEAVDTPVLVGSGVNPENIEELLKI-----ADGVIV--GTSLKKGGVTW--N---- 243 (263)
T ss_pred CCCEEEEecccCCCCCCHHHHHHHHhccCCCEEEecCCCHHHHHHHHHH-----cCceEE--EEEEccCCEec--C----
Confidence 345544433222233334445555554 66777777776666666653 133322 34444455542 2
Q ss_pred ccchHHHHHHHHHHHH
Q 038498 91 FLGGEKLKEFINFTLH 106 (248)
Q Consensus 91 ~i~~~~~~~i~~~~~~ 106 (248)
+++.+.+.++++.+++
T Consensus 244 ~VD~~Rv~~~v~~a~~ 259 (263)
T COG0434 244 PVDLERVRRFVEAARR 259 (263)
T ss_pred ccCHHHHHHHHHHHHH
Confidence 3567888878776655
No 331
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=29.21 E-value=51 Score=22.33 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=23.0
Q ss_pred eEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCC
Q 038498 8 LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSD 49 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~ 49 (248)
--++++=|||.+++ -+.++.|.++ ..+++.-|-.
T Consensus 40 ~~lvLeeDGT~Vd~--------EeyF~tLpdnT~lm~L~~gq~ 74 (81)
T cd06537 40 LTLVLEEDGTAVDS--------EDFFELLEDDTCLMVLEQGQS 74 (81)
T ss_pred eEEEEecCCCEEcc--------HHHHhhCCCCCEEEEECCCCc
Confidence 56889999999976 3456666666 5555555543
No 332
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=28.44 E-value=55 Score=22.01 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=22.0
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG 47 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG 47 (248)
.--++++=|||.+++ -+.++.|..+ ..+++.-|
T Consensus 40 ~~~lvL~eDGT~Vd~--------EeyF~~LpdnT~lm~L~~g 73 (78)
T cd06539 40 LVTLVLEEDGTVVDT--------EEFFQTLGDNTHFMVLEKG 73 (78)
T ss_pred CcEEEEeCCCCEEcc--------HHHHhhCCCCCEEEEECCC
Confidence 456888999999976 3455566666 55555444
No 333
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.44 E-value=24 Score=22.69 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=20.5
Q ss_pred HHHhhc-cCCEEEEcCCCCCCCCCHHHHhh
Q 038498 194 LRYLDD-FNEIHFFGDKTYKGGNDHEIFES 222 (248)
Q Consensus 194 l~~l~~-~~~~~aiGD~~~~~~NDi~M~~~ 222 (248)
++.|++ ..-++.||| ..-|++|++.
T Consensus 7 VqQlLK~~G~ivyfg~----r~~~iemm~~ 32 (68)
T COG4483 7 VQQLLKKFGIIVYFGK----RLYDIEMMQI 32 (68)
T ss_pred HHHHHHHCCeeeecCC----HHHHHHHHHH
Confidence 556665 778999999 9999999984
No 334
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=27.97 E-value=91 Score=25.51 Aligned_cols=30 Identities=13% Similarity=0.111 Sum_probs=22.4
Q ss_pred cCCEEEEcCCCCCCCC--CHHHHhhCCCceEEccCc
Q 038498 200 FNEIHFFGDKTYKGGN--DHEIFESERTVGHTVTSP 233 (248)
Q Consensus 200 ~~~~~aiGD~~~~~~N--Di~M~~~~g~~~~av~Na 233 (248)
.-.+++-|- =.+ |+.-+...|..++.++.|
T Consensus 182 ~~pviasGG----v~~~~Dl~~l~~~g~~gvivg~a 213 (228)
T PRK04128 182 DEEFIYAGG----VSSAEDVKKLAEIGFSGVIIGKA 213 (228)
T ss_pred CCCEEEECC----CCCHHHHHHHHHCCCCEEEEEhh
Confidence 457899887 444 887777777778888775
No 335
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=27.71 E-value=97 Score=26.18 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 28 QMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.|+.|+++ ++++++|+.+...+...+.
T Consensus 148 Gv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~ 179 (286)
T PLN02779 148 GVLRLMDEALAAGIKVAVCSTSNEKAVSKIVN 179 (286)
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 456678888888 9999999988776555444
No 336
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=27.56 E-value=1e+02 Score=23.60 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=14.4
Q ss_pred cceEEEEecCCCCCCC
Q 038498 6 QGLLALFDVDGTLTAP 21 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~ 21 (248)
++|+|+||+||||+++
T Consensus 4 ~~~~viFD~DGTLiDs 19 (188)
T PRK10725 4 RYAGLIFDMDGTILDT 19 (188)
T ss_pred cceEEEEcCCCcCccC
Confidence 5899999999999984
No 337
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=27.52 E-value=3.3e+02 Score=21.91 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHhhc-CeEEEEcCCChH---HHHHHhcc
Q 038498 24 AATPQMLEFMRELRKV-VTVGVVGGSDLS---KISEQLGK 59 (248)
Q Consensus 24 ~i~~~~~~al~~l~~~-~~v~iaTGR~~~---~~~~~l~~ 59 (248)
.+.+...+.++.++++ .+++++||-... .+.+.++.
T Consensus 77 ~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~ 116 (212)
T COG0560 77 RLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI 116 (212)
T ss_pred cCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC
Confidence 4567788899999999 999999998753 35566664
No 338
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=27.10 E-value=1.2e+02 Score=21.52 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 25 ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 25 i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+.++.+.++.++++ .+++..|+.+-+.+.+...
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ad 99 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSNSESPLARLAD 99 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHSS
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCCCCCchhhhCC
Confidence 478899999999999 9999999998777777664
No 339
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=26.97 E-value=1.4e+02 Score=24.95 Aligned_cols=52 Identities=15% Similarity=-0.027 Sum_probs=34.4
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~ 58 (248)
..++.+|+||+.+....+.+.+..=.+.-.+.+ +.-++.|=-++......++
T Consensus 80 ~Div~vd~dG~~v~G~~kPs~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~ 133 (260)
T PRK07090 80 SNLLLVDEDLNVLDGEGMPNPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLE 133 (260)
T ss_pred HHeEEECCCCCCCCCCCCCChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcC
Confidence 468999999999976556666653333334444 8888887666665555554
No 340
>PRK00805 putative deoxyhypusine synthase; Provisional
Probab=26.73 E-value=1.1e+02 Score=26.77 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=49.2
Q ss_pred ecCCCCC--CCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcc-cccCCCceEEecCCcEEEeCC-cEEEE
Q 038498 13 DVDGTLT--APRKAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGK-TVIDEYDYVFSENGLVAHKDG-KLIGT 85 (248)
Q Consensus 13 DlDGTLl--~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~-~~~~~~~~~i~~nGa~i~~~~-~~i~~ 85 (248)
|-|.|+. -+.+-++....+.|..|.++ +.+++.||-.+. ++.+-++. ++...+ ..++..+++.| ..++.
T Consensus 44 d~~~~ifL~~tg~mvsaGlr~~i~~Li~~g~VD~iVTTgani~hD~~~~lg~~~y~g~f----~~dd~~Lr~~ginRIgd 119 (329)
T PRK00805 44 DPDNTIFMGLSGAMVPAGMRKIIKWLIRNRYVDVLVSTGANIFHDIHEALGFKHYKGSH----HVDDEELFKEGIDRIYD 119 (329)
T ss_pred CCCCeEEEEeccchHHHHHHHHHHHHHHcCCeeEEEeCCCchHHHHHHHcCCCeeccCC----CCCHHHHHHcCCCcccc
Confidence 4455533 23455788899999999888 999999999987 68888873 221211 35666666544 56666
Q ss_pred eecc
Q 038498 86 QSLK 89 (248)
Q Consensus 86 ~~~~ 89 (248)
..+|
T Consensus 120 v~ip 123 (329)
T PRK00805 120 VFAY 123 (329)
T ss_pred cccC
Confidence 6654
No 341
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=26.32 E-value=1.2e+02 Score=30.52 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhc--CeEEEEcCCCh--HHHHHHhcccccCCCceEEecCCcEE
Q 038498 27 PQMLEFMRELRKV--VTVGVVGGSDL--SKISEQLGKTVIDEYDYVFSENGLVA 76 (248)
Q Consensus 27 ~~~~~al~~l~~~--~~v~iaTGR~~--~~~~~~l~~~~~~~~~~~i~~nGa~i 76 (248)
..++.+|-++... +.|++.|||+- +.++..+...+..+++-+|..||-.+
T Consensus 752 ~~~L~~LcEvv~~Y~CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l~~Y~t 805 (1002)
T PF07520_consen 752 CKTLRALCEVVHHYDCDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPLHGYRT 805 (1002)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCccccHHHHHHHHHhCCCCcccEEecCCeee
Confidence 3456666665556 99999999983 45666666555567889999999655
No 342
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=26.30 E-value=61 Score=21.92 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=21.9
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG 47 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG 47 (248)
.--|+++-|||.+++ -+.++.|..+ ..+++.-|
T Consensus 42 ~~~lvL~eDGT~Vdd--------EeyF~tLp~nT~l~~L~~g 75 (80)
T cd06536 42 PITLVLAEDGTIVED--------EDYFLCLPPNTKFVLLAEN 75 (80)
T ss_pred ceEEEEecCCcEEcc--------HHHHhhCCCCcEEEEECCC
Confidence 356789999999976 3455566666 55555444
No 343
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=26.18 E-value=59 Score=26.50 Aligned_cols=37 Identities=27% Similarity=0.195 Sum_probs=27.7
Q ss_pred HHHHHhh-ccCCEEEEcCCCCCCCCC-HHHHhhCCCceEEccC
Q 038498 192 YCLRYLD-DFNEIHFFGDKTYKGGND-HEIFESERTVGHTVTS 232 (248)
Q Consensus 192 ~al~~l~-~~~~~~aiGD~~~~~~ND-i~M~~~~g~~~~av~N 232 (248)
.|++.+- +++++++||| +.|| +--.+.+|+.++-|..
T Consensus 189 ~al~~~gv~p~~aVMIGD----D~~dDvgGAq~~GMrgilVkT 227 (262)
T KOG3040|consen 189 SALQALGVDPEEAVMIGD----DLNDDVGGAQACGMRGILVKT 227 (262)
T ss_pred HHHHhcCCChHHheEEcc----ccccchhhHhhhcceeEEeec
Confidence 3444443 4899999999 9885 6667788888888865
No 344
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=26.01 E-value=98 Score=27.41 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 17 TLTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 17 TLl~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
|++.+.+.|-..+++.+++..++ -.+.++-||...-+.++...
T Consensus 5 ~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~ 48 (385)
T COG0743 5 TILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIRE 48 (385)
T ss_pred EEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHH
Confidence 56778899999999999999999 89999999988877777775
No 345
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=25.85 E-value=61 Score=21.57 Aligned_cols=15 Identities=20% Similarity=0.399 Sum_probs=12.1
Q ss_pred ceEEEEecCCCCCCC
Q 038498 7 GLLALFDVDGTLTAP 21 (248)
Q Consensus 7 ~kli~~DlDGTLl~~ 21 (248)
.-.++++=|||.+++
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 456788999999976
No 346
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=25.74 E-value=1.9e+02 Score=22.88 Aligned_cols=49 Identities=10% Similarity=0.021 Sum_probs=30.8
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHH
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISE 55 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~ 55 (248)
-.++.+|+||+.+....+.|.+..-.+.-.+.+ +.-++-|=-++.....
T Consensus 45 ~di~~v~~~g~~~~g~~~ps~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s 95 (193)
T TIGR03328 45 EDFLVVDLQGKPVSGGLKPSAETLLHTQLYRLTPGAGAVLHTHSVEATVLS 95 (193)
T ss_pred ceEEEEcCCCCCCCCCCCCCcHHHHHHHHHHhCCCCeEEEEcCCHHHHHHH
Confidence 358899999999986556666654433333333 7777776555544433
No 347
>PRK12464 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=25.58 E-value=1.2e+02 Score=27.09 Aligned_cols=52 Identities=10% Similarity=0.152 Sum_probs=39.4
Q ss_pred CCCCCCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhcccccCCCceEEecC
Q 038498 18 LTAPRKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSEN 72 (248)
Q Consensus 18 Ll~~~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~n 72 (248)
++.+.+.|-..+++.+++..++ -.++++.|+....+.++... +.+.+++..+
T Consensus 1 ILGsTGSIG~qtLdVi~~~~d~f~v~~Laa~~n~~~L~~q~~~---f~p~~v~i~~ 53 (383)
T PRK12464 1 ILGSTGSIGTSALDVVSAHPEHFKVVGLTANYNIELLEQQIKR---FQPRIVSVAD 53 (383)
T ss_pred CCccccHHHHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHH---hCCCEEEEcC
Confidence 3556778889999999998888 78888888988888888776 2345555544
No 348
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=25.40 E-value=56 Score=27.23 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=30.0
Q ss_pred EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHh
Q 038498 183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFE 221 (248)
Q Consensus 183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~ 221 (248)
++-.+.+||.+|..+++ ++.+++|-| +...+.=++
T Consensus 156 lft~~~~KG~~L~~fL~~~~~~pk~IIfIDD----~~~nl~sv~ 195 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKINQSPKKIIFIDD----NKENLKSVE 195 (252)
T ss_pred EEeCCCccHHHHHHHHHHcCCCCCeEEEEeC----CHHHHHHHH
Confidence 77889999999999996 889999999 877666554
No 349
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=24.90 E-value=76 Score=25.20 Aligned_cols=42 Identities=24% Similarity=0.285 Sum_probs=30.2
Q ss_pred eeCCCCHHHHHHHhhccCCEEEEcCCCCCCCCCHHHHhhCCCceEEccC
Q 038498 184 FPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTS 232 (248)
Q Consensus 184 ~~~~~~K~~al~~l~~~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~N 232 (248)
.|...+|... +.+..--++-|| |.||+-..+.+|..++-+--
T Consensus 171 k~~qy~Kt~~---i~~~~~~IhYGD----SD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 171 KPGQYTKTQW---IQDKNIRIHYGD----SDNDITAAKEAGARGIRILR 212 (237)
T ss_pred CcccccccHH---HHhcCceEEecC----CchhhhHHHhcCccceeEEe
Confidence 3444555443 344667899999 99999999999977776544
No 350
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=24.78 E-value=2.2e+02 Score=24.15 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=28.0
Q ss_pred CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 24 AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 24 ~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
.+.+.+.+.|+.|+++ ++++|+||-...-+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 4677889999999999 9999999988765544444
No 351
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.78 E-value=1.4e+02 Score=21.37 Aligned_cols=34 Identities=12% Similarity=0.037 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 25 ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 25 i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-++++.++++.++++ .+++..|+..-+.+.+.-.
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ad 93 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLAKLAD 93 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHHHhCC
Confidence 478999999999999 9999999988777666444
No 352
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=24.27 E-value=2.5e+02 Score=19.87 Aligned_cols=30 Identities=17% Similarity=0.121 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHhhc-CeEEEEcCCChHHHHH
Q 038498 26 TPQMLEFMRELRKV-VTVGVVGGSDLSKISE 55 (248)
Q Consensus 26 ~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~ 55 (248)
++.++++++.++++ ++++..|+..-..+.+
T Consensus 73 ~~~~~~~~~~a~~~g~~iv~iT~~~~~~l~~ 103 (139)
T cd05013 73 TKETVEAAEIAKERGAKVIAITDSANSPLAK 103 (139)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCCCChhHH
Confidence 57788888888888 8999999886555554
No 353
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=24.26 E-value=1.9e+02 Score=23.05 Aligned_cols=51 Identities=10% Similarity=0.088 Sum_probs=33.6
Q ss_pred eEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhc
Q 038498 8 LLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~ 58 (248)
.++.+|+||..+..+.+.|.++.-.+.-.+.+ +..++-|=-++......+.
T Consensus 55 di~~vd~~g~~~~~~~~Ps~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~ 107 (204)
T PRK09220 55 DFLQVDIAGNAVPSGRKPSAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVE 107 (204)
T ss_pred hEEEEcCCCCCCCCCCCcChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhc
Confidence 57889999999875555666654444444444 8888888766665444443
No 354
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=24.18 E-value=2.4e+02 Score=19.14 Aligned_cols=46 Identities=11% Similarity=0.143 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHcCCce--EEEEecCceEEEEeeC-CCCHHHHHHHhhc
Q 038498 154 IRPKMVSVLREKFAHLN--LTFSIGGQISFDVFPQ-GWDKTYCLRYLDD 199 (248)
Q Consensus 154 ~~~~~~~~l~~~~~~~~--~~~~~~~~~~~di~~~-~~~K~~al~~l~~ 199 (248)
...++..++...||+.. +.+..++...+.+.-. .-+|....+.|.+
T Consensus 21 L~~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE 69 (81)
T PRK10597 21 LAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE 69 (81)
T ss_pred HHHHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence 45577788999999865 6555556677887433 2255554444443
No 355
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=23.95 E-value=1.3e+02 Score=24.36 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHh
Q 038498 24 AATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQL 57 (248)
Q Consensus 24 ~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l 57 (248)
.+-+.+.++|++|+++ ++++|+|..+.......+
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~ 129 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF 129 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 4667889999999999 999999998866443333
No 356
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=23.79 E-value=70 Score=21.54 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=19.0
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEE
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVV 45 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~ia 45 (248)
.-.++++-|||.+++ -+.++.|..+ ..+++.
T Consensus 40 ~~~lvL~eDGTeVdd--------EeYF~tLp~nT~l~~l~ 71 (78)
T cd01615 40 PVTLVLEEDGTEVDD--------EEYFQTLPDNTVLMLLE 71 (78)
T ss_pred CeEEEEeCCCcEEcc--------HHHHhcCCCCcEEEEEC
Confidence 345888999999866 2445555555 444433
No 357
>TIGR00734 hisAF_rel hisA/hisF family protein. This alignment models a family of proteins found so far in three archaeal species: Methanobacterium thermoautotrophicum, Methanococcus jannaschii, and Archaeoglobus fulgidus. This protein is homologous to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA) and, with lower similarity, to the cyclase HisF, both of which are enzymes of histidine biosynthesis. Each species with this protein also encodes HisA. The function of this protein is unknown.
Probab=23.73 E-value=3.2e+02 Score=22.13 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=20.8
Q ss_pred eEEEEecC--CCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC--CChHHHHHH
Q 038498 8 LLALFDVD--GTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG--SDLSKISEQ 56 (248)
Q Consensus 8 kli~~DlD--GTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG--R~~~~~~~~ 56 (248)
.+|++|+| ||+-. ++ .+.++++.+. ...++++| |+..++.+.
T Consensus 156 ~ii~tdI~~dGt~~G----~d---~eli~~i~~~~~~pvia~GGi~s~ed~~~l 202 (221)
T TIGR00734 156 GLIVLDIHSVGTMKG----PN---LELLTKTLELSEHPVMLGGGISGVEDLELL 202 (221)
T ss_pred EEEEEECCccccCCC----CC---HHHHHHHHhhCCCCEEEeCCCCCHHHHHHH
Confidence 45666665 55322 12 4555555555 33445555 344455543
No 358
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=23.62 E-value=1.1e+02 Score=19.50 Aligned_cols=18 Identities=17% Similarity=0.064 Sum_probs=10.4
Q ss_pred HHHHHHHHHhhc-CeEEEE
Q 038498 28 QMLEFMRELRKV-VTVGVV 45 (248)
Q Consensus 28 ~~~~al~~l~~~-~~v~ia 45 (248)
...+.|.++.++ .+++++
T Consensus 51 ~~~~~l~~~v~~G~~lvl~ 69 (70)
T PF14258_consen 51 EEAEALLEWVEAGNTLVLA 69 (70)
T ss_pred HHHHHHHHHHHcCCEEEEe
Confidence 555666666666 555554
No 359
>PRK14556 pyrH uridylate kinase; Provisional
Probab=23.34 E-value=2e+02 Score=23.95 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=24.0
Q ss_pred HHHHHHHhhc-CeEEEEcCCChHHHHHHhcc
Q 038498 30 LEFMRELRKV-VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 30 ~~al~~l~~~-~~v~iaTGR~~~~~~~~l~~ 59 (248)
..+++.+.+. +.+.+..|+....+.+.+..
T Consensus 209 ~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~G 239 (249)
T PRK14556 209 LGAFTQCRDFGIPIYVFDLTQPNALVDAVLD 239 (249)
T ss_pred HHHHHHHHHCCCcEEEECCCCchHHHHHHcC
Confidence 4677777788 99999999988888877753
No 360
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=22.97 E-value=1.7e+02 Score=24.01 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=34.5
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhcc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLGK 59 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~~ 59 (248)
-.++.+|+||+.+....+.|.+..=.+.-.+.+ +.-++-|=-++......++.
T Consensus 55 ~div~vd~~G~~~eG~~kPSsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~ 109 (234)
T PRK13145 55 ENMVVTDLDGNVVEGDLNPSSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR 109 (234)
T ss_pred HHEEEECCCCCCcCCCCCccccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC
Confidence 468899999999976545565554444434444 77777776666666655553
No 361
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=22.94 E-value=1.7e+02 Score=26.68 Aligned_cols=77 Identities=22% Similarity=0.325 Sum_probs=46.4
Q ss_pred EEEecCCCCCCCCC-C---CCHHHHHHHHHHhhcCeEEEEcCCChHH----HHHHhcccccCCCc-eEEecCCcEEEeCC
Q 038498 10 ALFDVDGTLTAPRK-A---ATPQMLEFMRELRKVVTVGVVGGSDLSK----ISEQLGKTVIDEYD-YVFSENGLVAHKDG 80 (248)
Q Consensus 10 i~~DlDGTLl~~~~-~---i~~~~~~al~~l~~~~~v~iaTGR~~~~----~~~~l~~~~~~~~~-~~i~~nGa~i~~~~ 80 (248)
|+.-=|||+.+=.. . ..+++++-|+++.+...++++|-++++. +.+.+... ++ +++..|-..
T Consensus 149 iVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ek----Y~vpVlpvnc~~----- 219 (492)
T PF09547_consen 149 IVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEK----YDVPVLPVNCEQ----- 219 (492)
T ss_pred EEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHH----hCCcEEEeehHH-----
Confidence 55667999886432 2 2445666666666558889999999974 44455442 22 555555422
Q ss_pred cEEEEeecccccchHHHHHHHHHHHH
Q 038498 81 KLIGTQSLKSFLGGEKLKEFINFTLH 106 (248)
Q Consensus 81 ~~i~~~~~~~~i~~~~~~~i~~~~~~ 106 (248)
+..+++..+++.++-
T Consensus 220 -----------l~~~DI~~Il~~vLy 234 (492)
T PF09547_consen 220 -----------LREEDITRILEEVLY 234 (492)
T ss_pred -----------cCHHHHHHHHHHHHh
Confidence 345666666665443
No 362
>PRK01221 putative deoxyhypusine synthase; Provisional
Probab=22.93 E-value=1.4e+02 Score=25.91 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHHHhhc--CeEEEEcCCChH-HHHHHhcc-cccCCCceEEecCCcEEEeCC-cEEEEeecc
Q 038498 23 KAATPQMLEFMRELRKV--VTVGVVGGSDLS-KISEQLGK-TVIDEYDYVFSENGLVAHKDG-KLIGTQSLK 89 (248)
Q Consensus 23 ~~i~~~~~~al~~l~~~--~~v~iaTGR~~~-~~~~~l~~-~~~~~~~~~i~~nGa~i~~~~-~~i~~~~~~ 89 (248)
+-+|...++.|..|.++ +.+++.||-.+. ++.+-++. ++...+ ..++..+.+.| ..++...+|
T Consensus 64 ~mvs~Glr~ii~~Li~~~~VD~iVtTgani~hD~~~~lg~~~y~G~~----~~dd~~Lr~~GinRIgdv~ip 131 (312)
T PRK01221 64 NLVSTGLRGLIADLIKRGLFNVVITTCGTLDHDIARSFGGVYYKGSF----DIDDAMLKDLGIHRLGNVLIP 131 (312)
T ss_pred hhHHHHHHHHHHHHHHcCCeeEEEeCCCchHHHHHHHcCCCeEecCC----CCChHHHHHcCCCcceeeccC
Confidence 34577789999999888 999999999987 68888875 222211 24566666544 666776665
No 363
>PRK10671 copA copper exporting ATPase; Provisional
Probab=22.80 E-value=1.4e+02 Score=29.52 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=39.4
Q ss_pred cceEEEEecCCCCCCC---CCCCCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 6 QGLLALFDVDGTLTAP---RKAATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
..+.+++-.||+++.- ...+-+...++|++|++. ++++++||.+.........
T Consensus 629 g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~ 685 (834)
T PRK10671 629 GATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAK 685 (834)
T ss_pred CCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 4567777788886621 344667788999999999 9999999998775444433
No 364
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=22.67 E-value=1.7e+02 Score=22.89 Aligned_cols=56 Identities=13% Similarity=0.136 Sum_probs=31.3
Q ss_pred EEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEEEeecccc--cchHHHHHHHHHHHH
Q 038498 43 GVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIGTQSLKSF--LGGEKLKEFINFTLH 106 (248)
Q Consensus 43 ~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~~~~~~~~--i~~~~~~~i~~~~~~ 106 (248)
+++-|++..++...+.. ++-.+|+++.. +|+++..-++|-. ++...++++.+.+++
T Consensus 68 iiviG~~~~dm~~A~n~--------l~~~gGG~vvv~~g~v~a~lpLpi~GlmS~~~~eev~~~~~~ 126 (171)
T PF13382_consen 68 IIVIGTNDEDMALAANR--------LIEMGGGIVVVDDGEVLAELPLPIAGLMSDLPAEEVARQLEE 126 (171)
T ss_dssp EEEEESSHHHHHHHHHH--------HHHTTSEEEEEETTEEEEEEE-TBTTTBBSS-HHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHH--------HHHhCCCEEEEECCEEEEEEeccccceecCCCHHHHHHHHHH
Confidence 45567777776666553 34456666554 7787777776532 444445555444333
No 365
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.27 E-value=1.1e+02 Score=21.86 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 25 ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 25 i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-++++.++++.++++ ++++..|+.+-..+.+.-.
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ad 93 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKLSD 93 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhhCC
Confidence 478899999999999 9999999987666666433
No 366
>PTZ00445 p36-lilke protein; Provisional
Probab=22.07 E-value=80 Score=25.76 Aligned_cols=49 Identities=29% Similarity=0.287 Sum_probs=40.4
Q ss_pred EeeCCCCHHHHHHHhhc-----cCCEEEEcCCCCCCCCCHHHHhhCCCceEEccCchh
Q 038498 183 VFPQGWDKTYCLRYLDD-----FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPED 235 (248)
Q Consensus 183 i~~~~~~K~~al~~l~~-----~~~~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~ 235 (248)
+.|....|..=++++++ ++++++|=| ...-++..+..|+.++-+.++..
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD----~~~NVeaA~~lGi~ai~f~~~e~ 209 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDD----DMNNCKNALKEGYIALHVTGNEG 209 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecC----CHHHHHHHHHCCCEEEEcCChHh
Confidence 45556667777778875 899999999 99999999999989998887643
No 367
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=21.71 E-value=86 Score=21.15 Aligned_cols=32 Identities=28% Similarity=0.278 Sum_probs=20.3
Q ss_pred eEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEcC
Q 038498 8 LLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVGG 47 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaTG 47 (248)
--++++-|||.+++ -+.++.|.++ ..+++.-|
T Consensus 40 ~~lvL~eDGT~Vd~--------EeyF~tLp~nt~l~vL~~g 72 (79)
T cd06538 40 SSLVLDEDGTGVDT--------EEFFQALADNTVFMVLGKG 72 (79)
T ss_pred cEEEEecCCcEEcc--------HHHHhhCCCCcEEEEECCC
Confidence 45888999999866 3455566666 44444444
No 368
>PRK02492 deoxyhypusine synthase-like protein; Provisional
Probab=20.94 E-value=1.8e+02 Score=25.65 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=44.3
Q ss_pred CCCCCHHHHHHHHHHhhc--CeEEEEcCCCh-H-HHHHHhcc-cccCCCceEEecCCcEEEeCC-cEEEEeecc
Q 038498 22 RKAATPQMLEFMRELRKV--VTVGVVGGSDL-S-KISEQLGK-TVIDEYDYVFSENGLVAHKDG-KLIGTQSLK 89 (248)
Q Consensus 22 ~~~i~~~~~~al~~l~~~--~~v~iaTGR~~-~-~~~~~l~~-~~~~~~~~~i~~nGa~i~~~~-~~i~~~~~~ 89 (248)
.+-+|....+.|..|.++ +.+++.||-.. . ++.+-++. ++...+ ..++..+.+.| ..+....+|
T Consensus 67 gamvsaGlr~~i~~Li~~~~VD~iVTTganl~eeD~~k~~g~~~y~G~f----~~dd~~Lr~~ginRIgdv~ip 136 (347)
T PRK02492 67 GSLSSAGCMQVYIDLVRNNMVDAIVATGANIVDQDFFEALGFKHYQGSP----FVDDAVLRDLYIDRIYDTYID 136 (347)
T ss_pred cchHHHHHHHHHHHHHHcCCeeEEEECCCCchHHHHHHHcCCCeecCCC----CCCHHHHHHcCCCcccccccC
Confidence 445688889999999888 99999999974 4 68888873 222222 25666666644 566666554
No 369
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=20.92 E-value=1.4e+02 Score=23.41 Aligned_cols=18 Identities=11% Similarity=0.087 Sum_probs=10.3
Q ss_pred ccccceEEEEecCCCCCC
Q 038498 3 ARKQGLLALFDVDGTLTA 20 (248)
Q Consensus 3 ~~~~~kli~~DlDGTLl~ 20 (248)
+|+..-.|++-.|-..+.
T Consensus 70 eR~~lpaIaLt~dsS~lT 87 (176)
T COG0279 70 ERPSLPAIALSTDSSVLT 87 (176)
T ss_pred cCCCCCeeEeecccHHHh
Confidence 345556666666655553
No 370
>PRK15418 transcriptional regulator LsrR; Provisional
Probab=20.81 E-value=1.2e+02 Score=26.18 Aligned_cols=59 Identities=22% Similarity=0.392 Sum_probs=36.2
Q ss_pred eEEEEecCCCCCCCCCCCCHHHHH-HHHHHhhc-CeEEEEcCCChHH-HHHHhcccccCCCceEEe
Q 038498 8 LLALFDVDGTLTAPRKAATPQMLE-FMRELRKV-VTVGVVGGSDLSK-ISEQLGKTVIDEYDYVFS 70 (248)
Q Consensus 8 kli~~DlDGTLl~~~~~i~~~~~~-al~~l~~~-~~v~iaTGR~~~~-~~~~l~~~~~~~~~~~i~ 70 (248)
-.-|||.||-++.. ..++++++. -|++|++- ..+++|.|..-.. +...+... -.+.+|+
T Consensus 244 ~g~f~D~~G~~v~~-~~~~~r~igi~le~Lk~ip~~I~vA~G~~K~~Ai~aALrgg---~i~~LIT 305 (318)
T PRK15418 244 LGYFFDADGELVPD-IKIHNELIGLPLSSLKTIPTVIGVAGGEEKAEAIIAALKGG---YINALVT 305 (318)
T ss_pred eeeEECCCCCCcCC-cccccceecCCHHHHcCCCCEEEEecCHHHHHHHHHHHhcC---CCCEEEE
Confidence 34589999999842 123333322 25677777 8999999988654 55555542 2445543
No 371
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=20.64 E-value=1.2e+02 Score=22.55 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=18.1
Q ss_pred cceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc-CeEEEEc
Q 038498 6 QGLLALFDVDGTLTAPRKAATPQMLEFMRELRKV-VTVGVVG 46 (248)
Q Consensus 6 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-~~v~iaT 46 (248)
+.-.|+||.|- ...+...+.....+.-+.|.++ +.+-+++
T Consensus 69 r~v~iaFD~D~-~~~Tn~~V~~a~~~l~~~L~~~G~~v~~~~ 109 (130)
T PF12965_consen 69 REVYIAFDADT-KPKTNKNVRRAIKRLGKLLKEAGCKVKIIT 109 (130)
T ss_pred ceEEEEecCCC-ccchhHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 44577888872 2222222333333333334444 5555543
No 372
>PF11834 DUF3354: Domain of unknown function (DUF3354); InterPro: IPR021789 Potassium channels take part in important processes of higher plants, including opening and closing of stomatal pores and leaf movement. Inward rectifying potassium (K(+)in) channels play an important role in turgor regulation and ion uptake in higher plants. All of them comprise, from their N-terminal to their C-terminal ends: a short hydrophilic region, a hydrophobic region structurally analogous and partially homologous to the transmembrane domain of voltage-gated animal channels from the Shaker superfamily, a putative cyclic nucleotide-binding domain, and a conserved C-terminal KHA domain. Between these last two regions, some of them (AKT1, AKT2 and SKT1) contain an ankyrin-repeat domain with six repeats homologous to those of human erythrocyte ankyrin. This entry represents the KHA domain which is unique to plant K(+)in channels. The KHA domain contains two high-homology blocks enriched for hydrophobic and acidic residues, respectively. The KHA domain is essential for interaction of plant K(+)in channels. The KHA domain mediates tetramerization and/or stabilisation of the heteromers [, , ].
Probab=20.56 E-value=2.6e+02 Score=18.26 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=24.3
Q ss_pred CeEEEEcCCChHHHHHHhcccccCCCceEEecCCcEEEe
Q 038498 40 VTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK 78 (248)
Q Consensus 40 ~~v~iaTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~ 78 (248)
.++++..+ ++.++.+.....+.....-+...+||.|-+
T Consensus 19 GKvi~lP~-SleeLl~ia~~kfg~~~~~v~~~dgaeIdD 56 (69)
T PF11834_consen 19 GKVIWLPD-SLEELLKIASEKFGFSATKVLNEDGAEIDD 56 (69)
T ss_pred CEEEEcCc-cHHHHHHHHHHHhCCCceEEEcCCCCEEeE
Confidence 55566553 666666544443333466888999999875
No 373
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=20.43 E-value=1.3e+02 Score=23.14 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHHhhc-CeEEEEcCCChHHHHHHhc
Q 038498 25 ATPQMLEFMRELRKV-VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 25 i~~~~~~al~~l~~~-~~v~iaTGR~~~~~~~~l~ 58 (248)
-+++++++++.++++ ++++..|+.+-+.+.+.-.
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~~ad 118 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTLGKLAD 118 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCC
Confidence 478899999999999 9999999998877777554
No 374
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=20.27 E-value=65 Score=22.21 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=21.0
Q ss_pred EEEEcCCCCCCCCCHHHHhhCCCceEEccCchhhHHHHh
Q 038498 203 IHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCK 241 (248)
Q Consensus 203 ~~aiGD~~~~~~NDi~M~~~~g~~~~av~Na~~~~k~~A 241 (248)
+.++|| . --+..|+.+|..++.+.+.+++++++-
T Consensus 1 IavIGd----~-~~v~gFrLaGv~~~~~~~~~ee~~~~l 34 (95)
T PF01990_consen 1 IAVIGD----R-DTVLGFRLAGVEGVYVNTDPEEAEEAL 34 (95)
T ss_dssp EEEEE-----H-HHHHHHHHTTSEEEEESHSHHHHHHHH
T ss_pred CEEEeC----H-HHHHHHHHcCCCCccCCCCHHHHHHHH
Confidence 467888 5 667889999955555541555544443
No 375
>COG1591 Holliday junction resolvase - archaeal type [DNA replication, recombination, and repair]
Probab=20.23 E-value=1.3e+02 Score=22.51 Aligned_cols=66 Identities=20% Similarity=0.261 Sum_probs=39.7
Q ss_pred HHHHHHHHhhc-CeEEE--EcCCChHHHHHHhcccccCCCceEEecCCcEEEe-CCcEEEEeecccccchHHHHHHHHHH
Q 038498 29 MLEFMRELRKV-VTVGV--VGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHK-DGKLIGTQSLKSFLGGEKLKEFINFT 104 (248)
Q Consensus 29 ~~~al~~l~~~-~~v~i--aTGR~~~~~~~~l~~~~~~~~~~~i~~nGa~i~~-~~~~i~~~~~~~~i~~~~~~~i~~~~ 104 (248)
=++.++.|.+. .-++= +||-+ +. +.+| +|+.||..++. .-+.-....+ .++.++++.++.++
T Consensus 10 EReLv~~L~e~GfAvvR~paSG~s--------k~---p~pD-ivA~~g~~~l~iE~K~~~~~ki--Yl~~e~ve~L~~FA 75 (137)
T COG1591 10 ERELVRILWERGFAVVRAPASGGS--------KR---PLPD-IVAGNGGVYLAIEVKSRRETKI--YLDKEQVEKLVEFA 75 (137)
T ss_pred HHHHHHHHHhcCceEEEcccCCCC--------CC---CCCC-EEecCCCEEEEEEEEeccCCcE--EEcHHHHHHHHHHH
Confidence 35666677777 44443 46621 11 1234 66888887664 3333333433 36799999999999
Q ss_pred HHhh
Q 038498 105 LHYI 108 (248)
Q Consensus 105 ~~~~ 108 (248)
+.+.
T Consensus 76 ~~fG 79 (137)
T COG1591 76 RRFG 79 (137)
T ss_pred HHcC
Confidence 8863
No 376
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=20.08 E-value=3.7e+02 Score=21.57 Aligned_cols=51 Identities=8% Similarity=-0.089 Sum_probs=32.3
Q ss_pred ceEEEEecCCCCCCCCCCCCHHHHHHHHHHhhc--CeEEEEcCCChHHHHHHhc
Q 038498 7 GLLALFDVDGTLTAPRKAATPQMLEFMRELRKV--VTVGVVGGSDLSKISEQLG 58 (248)
Q Consensus 7 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~--~~v~iaTGR~~~~~~~~l~ 58 (248)
-.++++|+||..+.. .+.|.+..-...-.+.+ +.-++.|=-++......+.
T Consensus 52 ~div~vd~~G~~~~g-~kpsse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~ 104 (214)
T TIGR01086 52 ESIVYVIDGGGKEEE-KLPSSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILL 104 (214)
T ss_pred HHEEEEcCCCCCCCC-CCCChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcC
Confidence 468899999999876 45666665444445544 6666666555544443333
Done!