Your job contains 1 sequence.
>038499
MKLKQFKARSKSTSSCKKTCSSEFENEQPHHHSESFGAQDMGSVPKSISSSEKKLTWLQS
QIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTT
NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE
RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFS
ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFL
GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI
QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH
SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY
QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKTGT
WCFMTAFEELIIGKQNSHKLHAKQATVPAEDEYAIYLENARHIASLLPEFPPQHRLPEDV
DPSCLHFRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038499
(609 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5LNM5 - symbol:SPO3178 "Uncharacterized protei... 465 1.2e-75 2
TIGR_CMR|SPO_3178 - symbol:SPO_3178 "conserved hypothetic... 465 1.2e-75 2
DICTYBASE|DDB_G0290035 - symbol:DDB_G0290035 species:4468... 731 1.3e-71 1
TIGR_CMR|CJE_0882 - symbol:CJE_0882 "aminotransferase, pu... 537 2.9e-62 2
WB|WBGene00022195 - symbol:Y71H2B.5 species:6239 "Caenorh... 553 1.1e-52 1
TIGR_CMR|BA_5215 - symbol:BA_5215 "cysteine desulfurase S... 198 2.3e-13 2
UNIPROTKB|P63516 - symbol:csd "Probable cysteine desulfur... 188 1.4e-11 1
TIGR_CMR|CBU_1357 - symbol:CBU_1357 "selenocysteine lyase... 164 5.9e-09 1
UNIPROTKB|Q9KPQ7 - symbol:csd "Probable cysteine desulfur... 158 1.3e-08 2
TIGR_CMR|VC_2309 - symbol:VC_2309 "aminotransferase, clas... 158 1.3e-08 2
UNIPROTKB|P77444 - symbol:sufS species:83333 "Escherichia... 151 5.4e-07 2
TIGR_CMR|SPO_2014 - symbol:SPO_2014 "cysteine desulfurase... 133 6.0e-07 2
UNIPROTKB|Q9EXP2 - symbol:sufS "Cysteine desulfurase" spe... 145 2.6e-06 2
GENEDB_PFALCIPARUM|PF07_0068 - symbol:PF07_0068 "cysteine... 133 2.6e-05 1
UNIPROTKB|Q8IBT4 - symbol:PF07_0068 "Cysteine desulfurase... 133 2.6e-05 1
TAIR|locus:2201856 - symbol:CPNIFS "chloroplastic NIFS-li... 123 0.00025 1
UNIPROTKB|Q46925 - symbol:csdA "cysteine sulfinate desulf... 121 0.00032 2
>UNIPROTKB|Q5LNM5 [details] [associations]
symbol:SPO3178 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000192
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0003824 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000103572 OMA:IVGPYEH
RefSeq:YP_168381.1 ProteinModelPortal:Q5LNM5 GeneID:3194038
KEGG:sil:SPO3178 PATRIC:23379803 ProtClustDB:CLSK886352
Uniprot:Q5LNM5
Length = 471
Score = 465 (168.7 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 104/268 (38%), Positives = 155/268 (57%)
Query: 46 KSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFY 105
+++ ++ + L +IG+ G L YAD+ ASGR+LR +E Y+ VLPFY
Sbjct: 7 RNVIEADVRAGRLADGLIGEKIMIPGLNGDVPLVYADYVASGRALRQVEQYVSEYVLPFY 66
Query: 106 GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165
N+HT SY G + T + A I + +G ++DA+IF GSG TA + RL ++GIA
Sbjct: 67 ANSHTEASYCGAYITGLRRAARAEIARLVGAAEDDAVIFAGSGATAGLNRLVSLLGIAQA 126
Query: 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIXXXXXXXXXIEALRSKL 225
+ R VVF+GP+EHHSN+L WR+S A+VVEI + L++ L
Sbjct: 127 A--------------RPVVFIGPYEHHSNILPWRESGAKVVEIPEAPEGGPDLVVLQTAL 172
Query: 226 ELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ 285
+ + ++G+FSA SNVTGI +DT + RLL +G + +D+A GPY+ ID+ G
Sbjct: 173 RAHAGSDL-MIGAFSAASNVTGIITDTVPVTRLLKAHGALSIWDYAGGGPYLPIDMGEGG 231
Query: 286 TDGYDAIFLSTHKFLGGPGSPGILLMTK 313
DAI +S HKF GGPG+ G+L++ +
Sbjct: 232 LRK-DAIVVSPHKFPGGPGASGVLVVNR 258
Score = 316 (116.3 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 76/210 (36%), Positives = 107/210 (50%)
Query: 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKK 382
P+ GGGTV++V+ + Y D+ RE GTP VI IRAALAF VK+ +G + I +
Sbjct: 266 PTWPGGGTVSFVSPWGHD---YSPDLAAREEAGTPNVIGDIRAALAFVVKDAVGADEIAR 322
Query: 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442
+E Y ALE N ++ +LG R SF + +G +P+H
Sbjct: 323 REAHYNAMALEGWAGNPHLILLGTDKGHRLPFFSFQVRDG-----VG--------RPVHQ 369
Query: 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502
+L+D+ GIQARGGCACAGPYGH LL +D A S + + + G KPGW R++F
Sbjct: 370 QLFTRMLSDVHGIQARGGCACAGPYGHRLLGIDRATSEALHADLAAGREMHKPGWVRLNF 429
Query: 503 PYYMSNXXXXXXXXXXXXIAIYGQRFLPLY 532
Y M ++ ++PLY
Sbjct: 430 SYLMDEATVRFIIDAVNDLSRRTGDYVPLY 459
>TIGR_CMR|SPO_3178 [details] [associations]
symbol:SPO_3178 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000192 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0003824 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000103572 OMA:IVGPYEH
RefSeq:YP_168381.1 ProteinModelPortal:Q5LNM5 GeneID:3194038
KEGG:sil:SPO3178 PATRIC:23379803 ProtClustDB:CLSK886352
Uniprot:Q5LNM5
Length = 471
Score = 465 (168.7 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 104/268 (38%), Positives = 155/268 (57%)
Query: 46 KSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFY 105
+++ ++ + L +IG+ G L YAD+ ASGR+LR +E Y+ VLPFY
Sbjct: 7 RNVIEADVRAGRLADGLIGEKIMIPGLNGDVPLVYADYVASGRALRQVEQYVSEYVLPFY 66
Query: 106 GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165
N+HT SY G + T + A I + +G ++DA+IF GSG TA + RL ++GIA
Sbjct: 67 ANSHTEASYCGAYITGLRRAARAEIARLVGAAEDDAVIFAGSGATAGLNRLVSLLGIAQA 126
Query: 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIXXXXXXXXXIEALRSKL 225
+ R VVF+GP+EHHSN+L WR+S A+VVEI + L++ L
Sbjct: 127 A--------------RPVVFIGPYEHHSNILPWRESGAKVVEIPEAPEGGPDLVVLQTAL 172
Query: 226 ELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ 285
+ + ++G+FSA SNVTGI +DT + RLL +G + +D+A GPY+ ID+ G
Sbjct: 173 RAHAGSDL-MIGAFSAASNVTGIITDTVPVTRLLKAHGALSIWDYAGGGPYLPIDMGEGG 231
Query: 286 TDGYDAIFLSTHKFLGGPGSPGILLMTK 313
DAI +S HKF GGPG+ G+L++ +
Sbjct: 232 LRK-DAIVVSPHKFPGGPGASGVLVVNR 258
Score = 316 (116.3 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 76/210 (36%), Positives = 107/210 (50%)
Query: 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKK 382
P+ GGGTV++V+ + Y D+ RE GTP VI IRAALAF VK+ +G + I +
Sbjct: 266 PTWPGGGTVSFVSPWGHD---YSPDLAAREEAGTPNVIGDIRAALAFVVKDAVGADEIAR 322
Query: 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442
+E Y ALE N ++ +LG R SF + +G +P+H
Sbjct: 323 REAHYNAMALEGWAGNPHLILLGTDKGHRLPFFSFQVRDG-----VG--------RPVHQ 369
Query: 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502
+L+D+ GIQARGGCACAGPYGH LL +D A S + + + G KPGW R++F
Sbjct: 370 QLFTRMLSDVHGIQARGGCACAGPYGHRLLGIDRATSEALHADLAAGREMHKPGWVRLNF 429
Query: 503 PYYMSNXXXXXXXXXXXXIAIYGQRFLPLY 532
Y M ++ ++PLY
Sbjct: 430 SYLMDEATVRFIIDAVNDLSRRTGDYVPLY 459
>DICTYBASE|DDB_G0290035 [details] [associations]
symbol:DDB_G0290035 species:44689 "Dictyostelium
discoideum" [GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 dictyBase:DDB_G0290035 Pfam:PF01171
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0003824 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:AAFI02000151 RefSeq:XP_635931.1
ProteinModelPortal:Q54GN1 EnsemblProtists:DDB0188699 GeneID:8627452
KEGG:ddi:DDB_G0290035 InParanoid:Q54GN1 OMA:HEARDII Uniprot:Q54GN1
Length = 1165
Score = 731 (262.4 bits), Expect = 1.3e-71, P = 1.3e-71
Identities = 180/491 (36%), Positives = 262/491 (53%)
Query: 66 NAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE 125
N+ ++ R +TY D TASGRSL IE Y++N V+P Y NTHT G TT E
Sbjct: 86 NSNNNNNNNSRLITYCDFTASGRSLESIEEYLLNEVIPLYANTHTLSDATGLQTTLFRRE 145
Query: 126 ASNYIKK-CLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVV 184
A +K+ C G +D+++F GSG+TAAI L ++ I S + +K + +
Sbjct: 146 AREIVKRGCRGSNVDDSLLFIGSGSTAAINALIHILDIKYLSSINKKPL----------I 195
Query: 185 FVGPHEHHSNLLSWRQSLAEVVEIXXXXXXXXXIEA------LRSKLELYK--DAKRPIL 236
+GP+EHHSN+L WR++ AEV+ I L L+ Y D+KR I+
Sbjct: 196 LLGPYEHHSNILPWREAGAEVLTCPENNNSKEGIRGGVDLNFLEEILKKYSKLDSKRLII 255
Query: 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGY--DAIFL 294
GSFSA SNV+GI DT + +L +YG + +D+A + PY+ ID+ + Y D IF
Sbjct: 256 GSFSAASNVSGIIEDTIKVTEILKRYGALSIWDYACAAPYIPIDMNPFNDNRYKKDVIFF 315
Query: 295 STHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354
S HKFLGG +PG++L+ K L L + P GGG+V YV N+ T YL + EE+E
Sbjct: 316 SPHKFLGGVSTPGVMLIKKKL--LNNNIPHRPGGGSVLYVTS-NQ--TTYLSNFEEKEEA 370
Query: 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTST----K 410
GTP ++ IR L F ++E+IG + I + E + +L +N+ +LG+ S +
Sbjct: 371 GTPDIVGSIRCGLVFQLREHIGIDNIYQSEIEHSNHLRLKLNKIKNLVLLGDNSINQFEQ 430
Query: 411 RQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470
+Q I S I EN T LH FVA+LLNDLFGIQ+R CACAGPY
Sbjct: 431 QQPQQQLPIISFLIRY---ENDPTLF---LHHNFVASLLNDLFGIQSRASCACAGPYLQC 484
Query: 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNXXXXXXXXXXXXIAIYGQRFLP 530
LL L++ + + +I + ++PG RI+ + + I + G +F+P
Sbjct: 485 LLGLNQEDNQNLLESIFEKQEIIRPGMVRINVSFTHTLQEIDFIIKAIEFICLNGWKFMP 544
Query: 531 LYNFNIKTGTW 541
LY F + +G W
Sbjct: 545 LYTFVVASGEW 555
>TIGR_CMR|CJE_0882 [details] [associations]
symbol:CJE_0882 "aminotransferase, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] InterPro:IPR000192 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008483 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0520 RefSeq:YP_178884.1 ProteinModelPortal:Q5HV01
STRING:Q5HV01 GeneID:3231395 KEGG:cjr:CJE0882 PATRIC:20043531
HOGENOM:HOG000103572 OMA:IVGPYEH ProtClustDB:CLSK872484
BioCyc:CJEJ195099:GJC0-902-MONOMER Uniprot:Q5HV01
Length = 422
Score = 537 (194.1 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 129/346 (37%), Positives = 199/346 (57%)
Query: 75 KRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE-ASNYIKKC 133
K+ + + D TAS +L+ +E I + +LP Y NTH+ DS + T ++E A IKK
Sbjct: 13 KKGILHFDFTASALALKCVEKEI-SKILPTYANTHS-DSSLNSFKTQQIYEQARKDIKKS 70
Query: 134 LGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS 193
L + A+I CG+G+++AIK+ QE++GI +P +++E+ + +V VGP+EHHS
Sbjct: 71 LSLDENFALIACGTGSSSAIKKFQELIGIYIPPLVKERYFTQIDKNTLPLVIVGPYEHHS 130
Query: 194 NLLSWRQSLAEVVEIXXXXXXXXXIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTR 253
N LS+R+ L E + I + L L+ K+ KR I+ SFS SNVTGI SD +
Sbjct: 131 NELSFREGLCECIRIPLDKNGEIDFDFLEKTLQ--KNKKRKIIASFSLASNVTGILSDYK 188
Query: 254 SIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313
I+ ++ ++ G FD ++ PY I + YDA+F+S+HK +GG G G+L + K
Sbjct: 189 RISEMVRKFKGIVAFDASSFIPYKNISCQY-----YDALFISSHKLIGGIGGSGLLAIKK 243
Query: 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE 373
L G+ PS GGTV YV+ ++ YL + E E GGTP ++Q+IRA+LAF +K+
Sbjct: 244 DL--CGN-KPSFAAGGTVGYVSRTSQ---CYLCNEEALEEGGTPGILQLIRASLAFKIKD 297
Query: 374 YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419
IG + I+K+EE + E+L N+ + R I +FNI
Sbjct: 298 SIGIKNIEKKEEILKDYFFEKLKTIPNLILYAKNLKTRLPIFAFNI 343
Score = 117 (46.2 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 443 PF-VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501
PF +A L+ + I+ R GCACAGPYGH LL L + Q + KPGW RIS
Sbjct: 348 PFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLK-----------TKPGWLRIS 396
Query: 502 FPY 504
Y
Sbjct: 397 LHY 399
Score = 39 (18.8 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 529 LPLYNFNIKTGTWCFMTAFE 548
LP++ FNIK G F A+E
Sbjct: 336 LPIFAFNIK-GISPFDIAYE 354
>WB|WBGene00022195 [details] [associations]
symbol:Y71H2B.5 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 Pfam:PF01171 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0003824
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:FO081557 OMA:HEARDII RefSeq:NP_497589.3
ProteinModelPortal:Q9N4F1 SMR:Q9N4F1 PaxDb:Q9N4F1
EnsemblMetazoa:Y71H2B.5 GeneID:175380 KEGG:cel:CELE_Y71H2B.5
UCSC:Y71H2B.5 CTD:175380 WormBase:Y71H2B.5 HOGENOM:HOG000019054
InParanoid:Q9N4F1 NextBio:887910 Uniprot:Q9N4F1
Length = 957
Score = 553 (199.7 bits), Expect = 1.1e-52, P = 1.1e-52
Identities = 162/533 (30%), Positives = 256/533 (48%)
Query: 23 EFENEQPHHHSESFGAQDMGSVPKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYAD 82
+F P S+ + +G+ S+S + L+W+++ IG+ + D PFG R++TY D
Sbjct: 5 KFAENIPDIFSQEEKEEALGARGAENSNSTELLSWMRNDEIGRKSVMDGPFGARKVTYCD 64
Query: 83 HTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAM 142
+TAS R+ IE YI + VLPFYGNTH+ + + TT +HEA I+ G G +D++
Sbjct: 65 YTASARAFTSIETYIQHEVLPFYGNTHSSVTVTAEQTTLFMHEARQEIRAFSGCGDQDSV 124
Query: 143 IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202
IF GSG+T A++ L +M +D+E +V EHHSNLL WR+
Sbjct: 125 IFTGSGSTCAVELLVHLMSDG-------------KDDEEVIVVHSSQEHHSNLLPWRKIA 171
Query: 203 AEVVEIXXXXXXXXXIEALRSKLELYKDAKRPI--LGSFSACSNVTGIYSDTRSIARLLH 260
E I + L++ L+ +++ I +G+F A SN+TGI D +++ ++L
Sbjct: 172 KECRNIEELENGQIDLVHLQNVLKEIRESHGSIKIIGTFCAASNLTGILIDIQNVTKILK 231
Query: 261 QYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS 320
+ A +DFA++ PY+ I V T DA+F S HKF GG SPG+L++ K++ Q +
Sbjct: 232 MFDAIAIWDFASAAPYIPILVNG--TYPLDAVFFSGHKFPGGVSSPGVLIVKKSIIQ--A 287
Query: 321 FPPSTCGGGTVNYVNGFNE---KDTLYLEDIEERESGGTPQV---IQMIRAALAFWVKEY 374
P GGGTV +VN +E K+ + E+ ++ G ++ ++M R+ +K
Sbjct: 288 TKPKRIGGGTVFFVNSTDEWYLKEVEHREEGGTADAVGAVRLAMAVKMKRSIGEDTIKNL 347
Query: 375 ---IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSF--NIHSSTINSSLG 429
I H V++K L + + + + Q+ L F N S +N G
Sbjct: 348 ESSISHLVLQKIRTIENLVLLGPSVVDHRLPVFSFLIRDPQSQLFFHHNYISVLLNDLFG 407
Query: 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA-GPYGHHLLDLDEAQSYQIRSAIQK 488
T+ GP+ LL + R A P DLD + Q+
Sbjct: 408 IQTRAGC--MCAGPYSQKLLGIDEELSQRFVSAIQESP------DLDRTHLRRQAEYSQQ 459
Query: 489 GYVGVKPGWTRISFPYYMSNXXXXXXXXXXXXIAIYGQRFLPLYNFNIKTGTW 541
++ +PG+TRISFPY+ IA + FL LY N +TG W
Sbjct: 460 EFL--RPGFTRISFPYFFKMAEVDEILEAIRFIAKHAADFLHLYQVNCETGEW 510
>TIGR_CMR|BA_5215 [details] [associations]
symbol:BA_5215 "cysteine desulfurase SufS" species:198094
"Bacillus anthracis str. Ames" [GO:0004123 "cystathionine
gamma-lyase activity" evidence=ISS] [GO:0016226 "iron-sulfur
cluster assembly" evidence=ISS] InterPro:IPR000192
InterPro:IPR010970 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0006534
PROSITE:PS00595 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 KO:K11717 TIGRFAMs:TIGR01979 HSSP:P77444
OMA:CAQPIMD RefSeq:NP_847397.1 RefSeq:YP_021870.1
ProteinModelPortal:Q81XL9 SMR:Q81XL9 DNASU:1084640
EnsemblBacteria:EBBACT00000010048 EnsemblBacteria:EBBACT00000017353
GeneID:1084640 GeneID:2814804 KEGG:ban:BA_5215 KEGG:bar:GBAA_5215
PATRIC:18788062 ProtClustDB:CLSK887839
BioCyc:BANT261594:GJ7F-5090-MONOMER Uniprot:Q81XL9
Length = 406
Score = 198 (74.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 90/355 (25%), Positives = 148/355 (41%)
Query: 70 DSPFGKRRLTYADHTA-SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASN 128
D ++L Y D A S + ++ IE + + N H +G T+ A
Sbjct: 14 DQKVNGKQLVYFDSAATSQKPIQVIET-LERYYKEYNSNVHRGVHTLGTKATDAYEGARE 72
Query: 129 YIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGP 188
++K + + +IF GTT A+ + G+ ++E DE + +
Sbjct: 73 KVRKFINAKSMEEIIFT-CGTTTALNTVAASYGL---ENVKEG------DE----IVISY 118
Query: 189 HEHHSNLLSWRQSL----AEVVEIXXXXXXXXXIEALRSKLELYKDAKRPILGSFSACSN 244
EHHSN++ W+Q A + + IE R + + K + S SN
Sbjct: 119 MEHHSNIIPWQQVAKKTGATLKYLPLQPDGTISIEDARQTIT--PNTK---IVSIMYVSN 173
Query: 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG 304
V G + + I + H+ G D A S P++++DV+ D Y LS HK G P
Sbjct: 174 VLGTINPVKEIGAIAHENGAIMVVDGAQSTPHMKVDVQDLNCDFYA---LSAHKMCG-PT 229
Query: 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR 364
G+L K L L + P GG +++V+ ++ T +++ + GTP + I
Sbjct: 230 GIGVLYGKKEL--LNNMEPIEFGGEMIDFVD--LQESTW--KELPWKFEAGTPIIGNAIG 283
Query: 365 AALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419
A E IG + I+K E + ALERL + I G R +++FNI
Sbjct: 284 LGAAIDFLEEIGLDNIEKHEHELAQYALERLSEVDGVTIYG--PKHRAGLVTFNI 336
Score = 48 (22.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 440 LHGPFVATLLNDLFGIQARGGCACAGP 466
+H VAT+L D+ GI R G CA P
Sbjct: 339 VHPHDVATVL-DVEGIAVRAGHHCAQP 364
>UNIPROTKB|P63516 [details] [associations]
symbol:csd "Probable cysteine desulfurase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000192
InterPro:IPR010970 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0005886 GO:GO:0040007 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006534
PROSITE:PS00595 eggNOG:COG0520 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 PIR:C70872 RefSeq:NP_215980.1 RefSeq:NP_335961.1
RefSeq:YP_006514847.1 ProteinModelPortal:P63516 SMR:P63516
PRIDE:P63516 EnsemblBacteria:EBMYCT00000003575
EnsemblBacteria:EBMYCT00000071942 GeneID:13320056 GeneID:886565
GeneID:924456 KEGG:mtc:MT1511 KEGG:mtu:Rv1464 KEGG:mtv:RVBD_1464
PATRIC:18125088 TubercuList:Rv1464 KO:K11717 OMA:MPPFITG
ProtClustDB:CLSK791179 TIGRFAMs:TIGR01979 Uniprot:P63516
Length = 417
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 77/302 (25%), Positives = 126/302 (41%)
Query: 137 GQEDAMIFCGSGTTAAI--KRLQEVMGIAVPSILRE-KLIKCLRDEERWVVFVGPHEHHS 193
G+ D +F G+ T + K E + + V +L + + + + + V+ EHH+
Sbjct: 78 GRADIALFVGADTDELVFTKNATEALNL-VSYVLGDSRFERAVGPGD--VIVTTELEHHA 134
Query: 194 NLLSWRQSLAEVVEIXXXXXXXXXIEALRSKLE-LYKDAKRPILGSFSACSNVTGIYSDT 252
NL+ W Q LA + R L+ LY D + ++ +F+ SNVTG+ +
Sbjct: 135 NLIPW-QELAR--RTGATLRWYGVTDDGRIDLDSLYLDDRVKVV-AFTHHSNVTGVLTPV 190
Query: 253 RSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312
+ HQ G D S P+ +D+ G D S HK LG P G+L
Sbjct: 191 SELVSRAHQSGALTVLDACQSVPHQPVDLHEL---GVDFAAFSGHKMLG-PNGIGVLYGR 246
Query: 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372
+ L L PP GG + V + Y +R GTP Q++ A A
Sbjct: 247 REL--LAQMPPFLTGGSMIETVT---MEGATYAP-APQRFEAGTPMTSQVVGLAAAARYL 300
Query: 373 EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTK-RQAILSF---NIHSSTINSSL 428
IG ++ E + A+E L ++ILG TS + R + ++F +H+ + L
Sbjct: 301 GAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAFVVEGVHAHDVGQVL 360
Query: 429 GE 430
+
Sbjct: 361 DD 362
>TIGR_CMR|CBU_1357 [details] [associations]
symbol:CBU_1357 "selenocysteine lyase" species:227377
"Coxiella burnetii RSA 493" [GO:0009000 "selenocysteine lyase
activity" evidence=ISS] [GO:0016261 "selenocysteine catabolic
process" evidence=ISS] InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006534 EMBL:AE016828
GenomeReviews:AE016828_GR PROSITE:PS00595 GO:GO:0016829
HOGENOM:HOG000017511 GO:GO:0031071 InterPro:IPR020578 KO:K11717
TIGRFAMs:TIGR01979 HSSP:P77444 RefSeq:NP_820346.1
ProteinModelPortal:Q83BY0 SMR:Q83BY0 PRIDE:Q83BY0 GeneID:1209263
KEGG:cbu:CBU_1357 PATRIC:17931457 OMA:DEVIFTR
ProtClustDB:CLSK914726 BioCyc:CBUR227377:GJ7S-1347-MONOMER
Uniprot:Q83BY0
Length = 405
Score = 164 (62.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 71/236 (30%), Positives = 104/236 (44%)
Query: 184 VFVGPHEHHSNLLSWRQSLAEVVEIXXXXXXXXXIEALRSKLELYKD--AKRPILGSFSA 241
+ + EHHSN++ W Q L E V L ++ Y+ KR L
Sbjct: 115 ILISAMEHHSNIVPW-QLLCERVNAKLKVIPVDDNGVL--DIDAYQRLLTKRTKLVGLIH 171
Query: 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLG 301
SNV G + + + +L HQ D A + + E+DV+ D Y +F S+HK L
Sbjct: 172 ISNVLGTVNPVKDMIQLAHQNKTPVLLDGAQAISHREVDVQDLDCDFY--VF-SSHK-LY 227
Query: 302 GPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ 361
GP G+L KA + L + PP GG ++ V+ F + D Y + + GTP +
Sbjct: 228 GPTGVGVLY-GKAKW-LETMPPYQGGGDMISRVS-FEKTD--Y-NVVPYKFEAGTPNMGG 281
Query: 362 MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSF 417
+I A IG E IK E + A E+L ++I+GN K AI SF
Sbjct: 282 VIGMGAAIDYVTRIGFEKIKLHENELMCYAAEQLQKIPGLRIIGNAPDKASAI-SF 336
>UNIPROTKB|Q9KPQ7 [details] [associations]
symbol:csd "Probable cysteine desulfurase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] [GO:0008483 "transaminase
activity" evidence=ISS] InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR022471
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008483 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006534 GO:GO:0016226
PROSITE:PS00595 eggNOG:COG0520 KO:K01766 OMA:AYGLEHL GO:GO:0031071
TIGRFAMs:TIGR03392 TIGRFAMs:TIGR01979 PIR:F82092 RefSeq:NP_231940.1
ProteinModelPortal:Q9KPQ7 DNASU:2613105 GeneID:2613105
KEGG:vch:VC2309 PATRIC:20083653 ProtClustDB:CLSK874752
Uniprot:Q9KPQ7
Length = 404
Score = 158 (60.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 78/304 (25%), Positives = 124/304 (40%)
Query: 114 YVGQHTTNMVHEASNYIK----KCLGGGQEDAMIFCGSGTTAAI---KRLQEVMGIAVPS 166
Y QH N VH S+ + G +E F G+ ++ I + E + + S
Sbjct: 46 YYSQHNAN-VHRGSHSLTAQATSQFEGAREQVAQFIGAPSSKNIIWTRGATEALNLIAQS 104
Query: 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIXXXXXXXXXIEALR 222
R L DE + V EHH+N++ W+ Q+ A+VV+I + A R
Sbjct: 105 YARSTLQA--GDE----ILVSETEHHANIVPWQMVAEQTGAKVVKIPMTTTGEFGLAAFR 158
Query: 223 SKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVR 282
L + R + + + +NVTG ++ + HQ G D A + +DVR
Sbjct: 159 QLL-----SPRCKIVALAHITNVTGTRQPIEAVIQAAHQQGAIVVIDGAQGIVHETVDVR 213
Query: 283 SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342
+ D Y +F S HK L P G+L AL L + PP GG V V+ F D
Sbjct: 214 ALDADFY--VF-SGHK-LYAPAGIGVLYGKTAL--LEAMPPWHGGGKMVEKVS-F---DG 263
Query: 343 LYLEDIEERESGGTPQVIQMIRAALAF-WVKEYIGHEVIKKQEETYIERALERLLPNQNI 401
+ + GTP V I A A W + + ++ ++A + + +I
Sbjct: 264 TTFTGLPGKFEAGTPNVAGAIALATAIDWYQS-LDRAAVEAHLHQLQQQAYQAISQIDDI 322
Query: 402 KILG 405
++LG
Sbjct: 323 RVLG 326
Score = 46 (21.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 440 LHGPFVATLLNDLFGIQARGGCACAGP 466
+H +ATLL D GI R G CA P
Sbjct: 341 VHHQDLATLL-DQQGIAVRAGHHCAHP 366
>TIGR_CMR|VC_2309 [details] [associations]
symbol:VC_2309 "aminotransferase, class V" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] [GO:0008483 "transaminase activity" evidence=ISS]
InterPro:IPR000192 InterPro:IPR010970 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR022471 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008483 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006534 GO:GO:0016226
PROSITE:PS00595 eggNOG:COG0520 KO:K01766 OMA:AYGLEHL GO:GO:0031071
TIGRFAMs:TIGR03392 TIGRFAMs:TIGR01979 PIR:F82092 RefSeq:NP_231940.1
ProteinModelPortal:Q9KPQ7 DNASU:2613105 GeneID:2613105
KEGG:vch:VC2309 PATRIC:20083653 ProtClustDB:CLSK874752
Uniprot:Q9KPQ7
Length = 404
Score = 158 (60.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 78/304 (25%), Positives = 124/304 (40%)
Query: 114 YVGQHTTNMVHEASNYIK----KCLGGGQEDAMIFCGSGTTAAI---KRLQEVMGIAVPS 166
Y QH N VH S+ + G +E F G+ ++ I + E + + S
Sbjct: 46 YYSQHNAN-VHRGSHSLTAQATSQFEGAREQVAQFIGAPSSKNIIWTRGATEALNLIAQS 104
Query: 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIXXXXXXXXXIEALR 222
R L DE + V EHH+N++ W+ Q+ A+VV+I + A R
Sbjct: 105 YARSTLQA--GDE----ILVSETEHHANIVPWQMVAEQTGAKVVKIPMTTTGEFGLAAFR 158
Query: 223 SKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVR 282
L + R + + + +NVTG ++ + HQ G D A + +DVR
Sbjct: 159 QLL-----SPRCKIVALAHITNVTGTRQPIEAVIQAAHQQGAIVVIDGAQGIVHETVDVR 213
Query: 283 SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342
+ D Y +F S HK L P G+L AL L + PP GG V V+ F D
Sbjct: 214 ALDADFY--VF-SGHK-LYAPAGIGVLYGKTAL--LEAMPPWHGGGKMVEKVS-F---DG 263
Query: 343 LYLEDIEERESGGTPQVIQMIRAALAF-WVKEYIGHEVIKKQEETYIERALERLLPNQNI 401
+ + GTP V I A A W + + ++ ++A + + +I
Sbjct: 264 TTFTGLPGKFEAGTPNVAGAIALATAIDWYQS-LDRAAVEAHLHQLQQQAYQAISQIDDI 322
Query: 402 KILG 405
++LG
Sbjct: 323 RVLG 326
Score = 46 (21.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 440 LHGPFVATLLNDLFGIQARGGCACAGP 466
+H +ATLL D GI R G CA P
Sbjct: 341 VHHQDLATLL-DQQGIAVRAGHHCAHP 366
>UNIPROTKB|P77444 [details] [associations]
symbol:sufS species:83333 "Escherichia coli K-12"
[GO:0009000 "selenocysteine lyase activity" evidence=IEA;IDA;NAS]
[GO:0006534 "cysteine metabolic process" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0001887 "selenium compound
metabolic process" evidence=IGI] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA;IDA] [GO:0031071 "cysteine desulfurase
activity" evidence=IEA;IDA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006790 "sulfur compound metabolic process" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_01831
InterPro:IPR000192 InterPro:IPR010970 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 GO:GO:0005737 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006534 PROSITE:PS00595
eggNOG:COG0520 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 KO:K11717 TIGRFAMs:TIGR01979 UniPathway:UPA00266
GO:GO:0009000 EMBL:AB055108 PIR:H64925 RefSeq:NP_416195.1
RefSeq:YP_489942.1 PDB:1C0N PDB:1I29 PDB:1JF9 PDB:1KMJ PDB:1KMK
PDBsum:1C0N PDBsum:1I29 PDBsum:1JF9 PDBsum:1KMJ PDBsum:1KMK
ProteinModelPortal:P77444 SMR:P77444 DIP:DIP-9324N IntAct:P77444
PRIDE:P77444 EnsemblBacteria:EBESCT00000001266
EnsemblBacteria:EBESCT00000016618 GeneID:12931287 GeneID:946185
KEGG:ecj:Y75_p1655 KEGG:eco:b1680 PATRIC:32118666 EchoBASE:EB3720
EcoGene:EG13962 OMA:GKHHAFD ProtClustDB:PRK09295
BioCyc:EcoCyc:G6906-MONOMER BioCyc:ECOL316407:JW1670-MONOMER
BioCyc:MetaCyc:G6906-MONOMER EvolutionaryTrace:P77444
Genevestigator:P77444 Uniprot:P77444
Length = 406
Score = 151 (58.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 66/249 (26%), Positives = 108/249 (43%)
Query: 184 VFVGPHEHHSNLLSWRQSLAEV-VEIXXXXXXXXXIEALRSKLELYKDAKRPILGSFSAC 242
+ + EHH+N++ W+ A V E+ L + L+ D K +L + +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF-DEKTRLL-AITHV 173
Query: 243 SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGG 302
SNV G + + L HQ+G D A + + +DV++ D Y +F S HK L G
Sbjct: 174 SNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY--VF-SGHK-LYG 229
Query: 303 PGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362
P GIL + +AL Q PP GG + V+ +E T R GTP +
Sbjct: 230 PTGIGILYVKEALLQ--EMPPWEGGGSMIATVS-LSEGTTW--TKAPWRFEAGTPNTGGI 284
Query: 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI--- 419
I A +G I + E+ + AL +L ++ + G + R +++FN+
Sbjct: 285 IGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAFNLGKH 342
Query: 420 HSSTINSSL 428
H+ + S L
Sbjct: 343 HAYDVGSFL 351
Score = 38 (18.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 441 HGPFVATLLNDLFGIQARGGCACAGP 466
H V + L D +GI R G CA P
Sbjct: 343 HAYDVGSFL-DNYGIAVRTGHHCAMP 367
>TIGR_CMR|SPO_2014 [details] [associations]
symbol:SPO_2014 "cysteine desulfurase SufS" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISS] [GO:0031071 "cysteine desulfurase activity"
evidence=ISS] InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006534 PROSITE:PS00595 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 KO:K11717 TIGRFAMs:TIGR01979 RefSeq:YP_167246.1
ProteinModelPortal:Q5LRV9 GeneID:3193329 KEGG:sil:SPO2014
PATRIC:23377359 ProtClustDB:CLSK933713 Uniprot:Q5LRV9
Length = 406
Score = 133 (51.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 59/233 (25%), Positives = 90/233 (38%)
Query: 190 EHHSNLLSWRQSLAEVVEIXXXXXXXXXIEALRSKLELYKDAKRPILGSFSACSNVTGIY 249
EHH+N++ W L E + +L + L R L + + CSNV G
Sbjct: 121 EHHANIVPWH-FLRERQGVVLKWVDPEPDGSLDPQAVLDAIGPRTKLVAITHCSNVLGTV 179
Query: 250 SDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGIL 309
D +SI G D + ++ +DV Q G D ++ HK G GS I
Sbjct: 180 VDVKSICAGARAKGVPVLVDGSQGAVHMPVDV---QDLGCDFYAITGHKLYGPSGSGAIY 236
Query: 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF 369
+ L ++ F GG + V KDT+ D + GTP ++Q I +A
Sbjct: 237 ARAERLAEMRPFMG---GGDMIKEVT----KDTVIYNDPPMKFEAGTPGIVQTIGMGVAL 289
Query: 370 WVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSS 422
+G E I E + A R + + G+ K AI SF + +
Sbjct: 290 DYMMALGMENIAAHEAGLRDYAASRFAGLNWLNVQGHAPGKA-AIFSFTLQGA 341
Score = 110 (43.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 49/212 (23%), Positives = 80/212 (37%)
Query: 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137
LTY D+ AS + + + + + Y N H ++ T + + L G
Sbjct: 23 LTYLDNGASAQKPQAVIDAVTRGYAEEYANVHRGLHFLSNLATEKYEAVRGIVARFLNAG 82
Query: 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS 197
ED ++ SGTT I + G A+P + DE + + EHH+N++
Sbjct: 83 SEDEIVL-NSGTTEGINMV--AYGWAMPQMQAG-------DE----IVLSTMEHHANIVP 128
Query: 198 WRQSLAEVVEIXXXXXXXXXIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257
W L E + +L + L R L + + CSNV G D +SI
Sbjct: 129 WH-FLRERQGVVLKWVDPEPDGSLDPQAVLDAIGPRTKLVAITHCSNVLGTVVDVKSICA 187
Query: 258 LLHQYGGFACFDFAASGPYVEIDVRSGQTDGY 289
G D + ++ +DV+ D Y
Sbjct: 188 GARAKGVPVLVDGSQGAVHMPVDVQDLGCDFY 219
Score = 57 (25.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHL 471
H ++T+L D G+ R G CAGP HL
Sbjct: 343 HAHDISTIL-DKKGVAVRAGHHCAGPLMDHL 372
>UNIPROTKB|Q9EXP2 [details] [associations]
symbol:sufS "Cysteine desulfurase" species:198628 "Dickeya
dadantii 3937" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_01831 InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006534 PROSITE:PS00595
HOGENOM:HOG000017511 GO:GO:0031071 InterPro:IPR020578 KO:K11717
TIGRFAMs:TIGR01979 UniPathway:UPA00266 GO:GO:0009000 EMBL:AJ301654
EMBL:CP002038 GenomeReviews:CP002038_GR RefSeq:YP_003883473.1
ProteinModelPortal:Q9EXP2 SMR:Q9EXP2 IntAct:Q9EXP2 GeneID:9734155
KEGG:ddd:Dda3937_03665 PATRIC:42317771 OMA:EMRPFIG
BioCyc:DDAD198628:GHFQ-2769-MONOMER Uniprot:Q9EXP2
Length = 412
Score = 145 (56.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 65/245 (26%), Positives = 102/245 (41%)
Query: 190 EHHSNLLSWRQSLAEVVEIXXXXXXXXXIEAL-RSKLELYKDAKRPILGSFSACSNVTGI 248
EHH+N++ W Q LA+ + L ++L D +R L + + SNV G
Sbjct: 127 EHHANIVPW-QMLAQARGLTLRVLPITDDGELDMAQLPALLD-ERTRLVAVTQVSNVLGT 184
Query: 249 YSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGI 308
+ I R H G D A + + +DV++ D Y S HK L GP G+
Sbjct: 185 VNPLAEIIRQAHACGAKVLVDGAQAVMHQAVDVQALDCDFYA---FSGHK-LYGPSGIGV 240
Query: 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALA 368
L L Q + PP GG + V+ + T Y D R G+P V +I A
Sbjct: 241 LYGKSELLQ--AMPPWEGGGAMIREVS--LTQGTTYA-DPPWRFEAGSPHVAGIIGLGAA 295
Query: 369 FWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI---HSSTIN 425
+G + I+ E + AL L +++ G RQ +++FN+ H+ +
Sbjct: 296 LDYVSALGVDAIQAHEGLLMRYALASLAEVPTLRLYG--PVHRQGVIAFNLGRHHAFDVG 353
Query: 426 SSLGE 430
S L +
Sbjct: 354 SFLDQ 358
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 441 HGPF-VATLLNDLFGIQARGGCACAGP 466
H F V + L D +GI R G CA P
Sbjct: 347 HHAFDVGSFL-DQYGIAIRTGHHCAMP 372
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 528 FLPLYNFNIKTGTWCFM 544
FL Y I+TG C M
Sbjct: 355 FLDQYGIAIRTGHHCAM 371
>GENEDB_PFALCIPARUM|PF07_0068 [details] [associations]
symbol:PF07_0068 "cysteine desulfurase,
putative" species:5833 "Plasmodium falciparum" [GO:0004123
"cystathionine gamma-lyase activity" evidence=ISS] [GO:0006534
"cysteine metabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000192 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006534 EMBL:AL844506 GO:GO:0004123 HOGENOM:HOG000017511
GO:GO:0020011 RefSeq:XP_001349069.1 HSSP:P77444
ProteinModelPortal:Q8IBT4 EnsemblProtists:PF07_0068:mRNA
GeneID:2655112 KEGG:pfa:PF07_0068 EuPathDB:PlasmoDB:PF3D7_0716600
OMA:VISICHA ProtClustDB:CLSZ2444890 Uniprot:Q8IBT4
Length = 546
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 82/379 (21%), Positives = 156/379 (41%)
Query: 65 KNAEFDSPFGK--RRLTYADHTASGRSLRYIENYIINNVLPFY----GNTHTCDSYVGQH 118
KN PF K + L Y D A+ + +I + FY N H + +
Sbjct: 65 KNVREHFPFFKENKSLIYFDSAATTHK----PSCVIEKMSEFYKKENSNIHRGIYKLSHN 120
Query: 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRD 178
TN + IK+ + + D +IF +G+T + V ++ E++IK D
Sbjct: 121 ATNNYEKVRETIKEYINCEKNDNIIFT-NGSTYGLN--------VVCKMMIEEIIKKEED 171
Query: 179 EERWVVFVGPHEHHSNLLSWRQSL-----AEVVEIXXXXXXXXXIEALRSKLELYKDAKR 233
E +++ EHHSN++ W++ + + + I+ L S + + + K
Sbjct: 172 E----IYLSYMEHHSNIIPWQEYINKEKKGRIKYVPLNKSGYINIKKLISNMNI--NTK- 224
Query: 234 PILGSFSACSNVTG-IYSDTRSIARLLHQYGGFACF-DFAASGPYVEIDVRSGQTDGY-- 289
++ S SNV G I + + I ++ + Y D + S +++ D++ + +
Sbjct: 225 -VI-SICHASNVIGNIQNIEKIIKKIKNVYPHIIIIIDASQSFAHIKYDIKKMKKNKSCP 282
Query: 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349
D + S HKF G+ G + + K L F P G + V+ + K L ++
Sbjct: 283 DILITSGHKFCASLGT-GFIFINKELSSKYKFKPLLYGSNIITNVSKYKSKFVTSLSELL 341
Query: 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA----LERLLPNQNIKILG 405
E + P ++ M +L F+ K I + Q E Y+ + + + N +++
Sbjct: 342 ETGTQNIPGILSM-GISLEFFKK--INWNYVY-QYEMYLYDLFIYYMNKYMKNHFVQLPN 397
Query: 406 -NTSTKRQAILSFNIHSST 423
N S K++ I ++ H T
Sbjct: 398 LNLSYKKENI-NYKSHMQT 415
>UNIPROTKB|Q8IBT4 [details] [associations]
symbol:PF07_0068 "Cysteine desulfurase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004123
"cystathionine gamma-lyase activity" evidence=ISS] [GO:0006534
"cysteine metabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000192 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006534 EMBL:AL844506 GO:GO:0004123 HOGENOM:HOG000017511
GO:GO:0020011 RefSeq:XP_001349069.1 HSSP:P77444
ProteinModelPortal:Q8IBT4 EnsemblProtists:PF07_0068:mRNA
GeneID:2655112 KEGG:pfa:PF07_0068 EuPathDB:PlasmoDB:PF3D7_0716600
OMA:VISICHA ProtClustDB:CLSZ2444890 Uniprot:Q8IBT4
Length = 546
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 82/379 (21%), Positives = 156/379 (41%)
Query: 65 KNAEFDSPFGK--RRLTYADHTASGRSLRYIENYIINNVLPFY----GNTHTCDSYVGQH 118
KN PF K + L Y D A+ + +I + FY N H + +
Sbjct: 65 KNVREHFPFFKENKSLIYFDSAATTHK----PSCVIEKMSEFYKKENSNIHRGIYKLSHN 120
Query: 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRD 178
TN + IK+ + + D +IF +G+T + V ++ E++IK D
Sbjct: 121 ATNNYEKVRETIKEYINCEKNDNIIFT-NGSTYGLN--------VVCKMMIEEIIKKEED 171
Query: 179 EERWVVFVGPHEHHSNLLSWRQSL-----AEVVEIXXXXXXXXXIEALRSKLELYKDAKR 233
E +++ EHHSN++ W++ + + + I+ L S + + + K
Sbjct: 172 E----IYLSYMEHHSNIIPWQEYINKEKKGRIKYVPLNKSGYINIKKLISNMNI--NTK- 224
Query: 234 PILGSFSACSNVTG-IYSDTRSIARLLHQYGGFACF-DFAASGPYVEIDVRSGQTDGY-- 289
++ S SNV G I + + I ++ + Y D + S +++ D++ + +
Sbjct: 225 -VI-SICHASNVIGNIQNIEKIIKKIKNVYPHIIIIIDASQSFAHIKYDIKKMKKNKSCP 282
Query: 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349
D + S HKF G+ G + + K L F P G + V+ + K L ++
Sbjct: 283 DILITSGHKFCASLGT-GFIFINKELSSKYKFKPLLYGSNIITNVSKYKSKFVTSLSELL 341
Query: 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA----LERLLPNQNIKILG 405
E + P ++ M +L F+ K I + Q E Y+ + + + N +++
Sbjct: 342 ETGTQNIPGILSM-GISLEFFKK--INWNYVY-QYEMYLYDLFIYYMNKYMKNHFVQLPN 397
Query: 406 -NTSTKRQAILSFNIHSST 423
N S K++ I ++ H T
Sbjct: 398 LNLSYKKENI-NYKSHMQT 415
>TAIR|locus:2201856 [details] [associations]
symbol:CPNIFS "chloroplastic NIFS-like cysteine
desulfurase" species:3702 "Arabidopsis thaliana" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006534 "cysteine metabolic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=ISS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0031071
"cysteine desulfurase activity" evidence=IEA;IDA] [GO:0001887
"selenium compound metabolic process" evidence=IDA] [GO:0006790
"sulfur compound metabolic process" evidence=IDA] [GO:0009000
"selenocysteine lyase activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0018283 "iron incorporation into
metallo-sulfur cluster" evidence=IDA] [GO:0010269 "response to
selenium ion" evidence=IMP] [GO:0000302 "response to reactive
oxygen species" evidence=RCA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=RCA] [GO:0010039 "response to
iron ion" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0055072 "iron ion homeostasis" evidence=RCA]
InterPro:IPR000192 InterPro:IPR010970 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006534 EMBL:AC006932 GO:GO:0010269
GO:GO:0001887 GO:GO:0006790 eggNOG:COG0520 HOGENOM:HOG000017511
GO:GO:0031071 KO:K11717 TIGRFAMs:TIGR01979 GO:GO:0018283
GO:GO:0009000 EMBL:AY078068 EMBL:AF419347 EMBL:AY094425
EMBL:AY149950 IPI:IPI00524760 RefSeq:NP_172325.2 UniGene:At.22935
UniGene:At.26502 HSSP:Q55793 ProteinModelPortal:Q93WX6 SMR:Q93WX6
STRING:Q93WX6 PaxDb:Q93WX6 PRIDE:Q93WX6 EnsemblPlants:AT1G08490.1
GeneID:837370 KEGG:ath:AT1G08490 TAIR:At1g08490 InParanoid:Q93WX6
OMA:HEVEELG PhylomeDB:Q93WX6 ProtClustDB:PLN02855 SABIO-RK:Q93WX6
Genevestigator:Q93WX6 GermOnline:AT1G08490 Uniprot:Q93WX6
Length = 463
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 77/289 (26%), Positives = 108/289 (37%)
Query: 190 EHHSNLLSWR---QSLAEVVE-IXXXXXXXXXIEALRSKLELYKDAKRPILGSFSACSNV 245
EHHS ++ W+ Q V++ + I LR EL + L + SNV
Sbjct: 171 EHHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLR---ELISPKTK--LVAVHHVSNV 225
Query: 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS 305
I H G D S P++ +DV Q D + S+HK G P
Sbjct: 226 LASSLPIEEIVVWAHDVGAKVLVDACQSVPHMVVDV---QKLNADFLVASSHKMCG-PTG 281
Query: 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRA 365
G L L L S PP GG ++ V F + T Y E R GTP + + I
Sbjct: 282 IGFLYGKSDL--LHSMPPFLGGGEMISDV--FLDHST-YAEP-PSRFEAGTPAIGEAIAL 335
Query: 366 ALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILG---NTSTKRQAILSFNIHSS 422
A IG I + E + E+L +++I G + S R A+ SFN+
Sbjct: 336 GAAVDYLSGIGMPKIHEYEVEIGKYLYEKLSSLPDVRIYGPRPSESVHRGALCSFNVEG- 394
Query: 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471
LH +AT L+ G+ R G CA P +L
Sbjct: 395 -----------------LHPTDLATFLDQQHGVAIRSGHHCAQPLHRYL 426
>UNIPROTKB|Q46925 [details] [associations]
symbol:csdA "cysteine sulfinate desulfinase" species:83333
"Escherichia coli K-12" [GO:0031071 "cysteine desulfurase activity"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IDA] [GO:0016783 "sulfurtransferase activity"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000192
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR022471
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U29581
GO:GO:0016226 PROSITE:PS00595 GO:GO:0016829 GO:GO:0000096
EMBL:AX000470 PIR:F65063 RefSeq:NP_417290.1 RefSeq:YP_491018.1
ProteinModelPortal:Q46925 SMR:Q46925 DIP:DIP-9323N IntAct:Q46925
PRIDE:Q46925 EnsemblBacteria:EBESCT00000002613
EnsemblBacteria:EBESCT00000014307 GeneID:12932128 GeneID:947275
KEGG:ecj:Y75_p2747 KEGG:eco:b2810 PATRIC:32121036 EchoBASE:EB2891
EcoGene:EG13082 eggNOG:COG0520 HOGENOM:HOG000017511 KO:K01766
OMA:AYGLEHL ProtClustDB:PRK10874 BioCyc:EcoCyc:G7454-MONOMER
BioCyc:ECOL316407:JW2781-MONOMER BioCyc:MetaCyc:G7454-MONOMER
Genevestigator:Q46925 GO:GO:0031071 GO:GO:0016783
InterPro:IPR020578 TIGRFAMs:TIGR03392 Uniprot:Q46925
Length = 401
Score = 121 (47.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 88/335 (26%), Positives = 132/335 (39%)
Query: 106 GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165
GN H Q T A + + L +D I GTT +I + +
Sbjct: 48 GNVHRSQFAEAQRLTARYEAAREKVAQLLNA-PDDKTIVWTRGTTESINMVAQCYA---- 102
Query: 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIXXXXXXXXXIEAL 221
R +L DE + V EHH+NL+ W +Q+ A+VV++ ++ L
Sbjct: 103 ---RPRLQP--GDE----IIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLL 153
Query: 222 RSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV 281
EL R IL + SNVTG D H G D A + DV
Sbjct: 154 P---ELITPRSR-IL-ALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADV 208
Query: 282 RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKD 341
+ D Y S HK L GP G+L L L + P GG V+ V+ F D
Sbjct: 209 QQLDIDFYA---FSGHK-LYGPTGIGVLYGKSEL--LEAMSPWLGGGKMVHEVS-F---D 258
Query: 342 TLYLEDIEERESGGTPQVIQMIRAALAF-WVKEYIGHEVIKKQEETYIERALERLLPNQN 400
+ + GTP V +I + A W+ +Y ++ Q E++ R+L L +
Sbjct: 259 GFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADY---DI--NQAESW-SRSLATLAEDAL 312
Query: 401 IKILGNTSTKRQ--AILSFN---IHSSTINSSLGE 430
K G S + Q ++L+F+ +H S + + L E
Sbjct: 313 AKRPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAE 347
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 440 LHGPFVATLLNDLFGIQARGGCACAGP 466
+H + TLL + +GI R G CA P
Sbjct: 336 VHHSDMVTLLAE-YGIALRAGQHCAQP 361
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 609 575 0.00080 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 619 (66 KB)
Total size of DFA: 334 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.49u 0.07s 46.56t Elapsed: 00:00:05
Total cpu time: 46.50u 0.07s 46.57t Elapsed: 00:00:05
Start: Sat May 11 09:35:35 2013 End: Sat May 11 09:35:40 2013