Query 038499
Match_columns 609
No_of_seqs 419 out of 3030
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 11:40:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038499.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038499hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 3.4E-60 7.4E-65 503.1 42.5 395 56-523 6-404 (405)
2 COG1104 NifS Cysteine sulfinat 100.0 2.5E-51 5.4E-56 419.4 36.2 378 78-533 2-386 (386)
3 PRK09295 bifunctional cysteine 100.0 9.5E-47 2.1E-51 406.5 43.2 395 55-523 5-403 (406)
4 PLN02724 Molybdenum cofactor s 100.0 1.1E-46 2.5E-51 434.4 41.5 422 53-525 19-489 (805)
5 PLN02855 Bifunctional selenocy 100.0 7E-46 1.5E-50 402.0 44.7 399 56-526 15-420 (424)
6 TIGR03392 FeS_syn_CsdA cystein 100.0 3.4E-45 7.4E-50 393.5 43.1 389 55-524 3-395 (398)
7 PRK10874 cysteine sulfinate de 100.0 1.4E-44 3.1E-49 389.1 44.2 388 55-524 6-398 (401)
8 TIGR01979 sufS cysteine desulf 100.0 2.2E-43 4.8E-48 380.1 43.3 395 57-524 2-401 (403)
9 PF00266 Aminotran_5: Aminotra 100.0 2.3E-44 5E-49 383.5 32.2 366 79-514 1-371 (371)
10 PLN02651 cysteine desulfurase 100.0 3.3E-43 7.1E-48 373.6 36.6 353 79-512 1-364 (364)
11 TIGR03402 FeS_nifS cysteine de 100.0 8.9E-43 1.9E-47 372.4 39.8 365 79-527 1-375 (379)
12 TIGR03403 nifS_epsilon cystein 100.0 9.8E-42 2.1E-46 364.7 40.8 370 79-526 1-377 (382)
13 KOG1549 Cysteine desulfurase N 100.0 8.8E-43 1.9E-47 357.3 30.5 376 77-533 43-427 (428)
14 TIGR02006 IscS cysteine desulf 100.0 1.1E-41 2.4E-46 366.6 40.7 373 78-532 4-385 (402)
15 TIGR01977 am_tr_V_EF2568 cyste 100.0 6.5E-40 1.4E-44 349.8 40.8 367 79-520 1-375 (376)
16 PRK14012 cysteine desulfurase; 100.0 1.1E-39 2.4E-44 351.3 41.5 373 78-534 4-389 (404)
17 PRK02948 cysteine desulfurase; 100.0 2.5E-39 5.5E-44 345.9 40.5 368 78-526 1-376 (381)
18 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.1E-38 2.4E-43 342.9 40.8 373 55-518 3-397 (397)
19 cd06453 SufS_like Cysteine des 100.0 5.7E-38 1.2E-42 334.5 39.3 367 79-518 1-373 (373)
20 TIGR01814 kynureninase kynuren 100.0 5.8E-38 1.2E-42 338.1 36.7 383 52-522 7-405 (406)
21 TIGR03235 DNA_S_dndA cysteine 100.0 8.6E-37 1.9E-41 323.1 35.8 345 80-502 1-353 (353)
22 PLN02409 serine--glyoxylate am 100.0 3.6E-33 7.8E-38 299.9 34.9 357 80-526 11-374 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 9.3E-33 2E-37 292.5 34.0 342 87-522 8-355 (356)
24 PRK03080 phosphoserine aminotr 100.0 2.8E-32 6.1E-37 290.6 31.9 355 76-526 11-375 (378)
25 TIGR01788 Glu-decarb-GAD gluta 100.0 1.4E-30 3E-35 279.3 40.4 369 79-525 35-430 (431)
26 TIGR02326 transamin_PhnW 2-ami 100.0 8.8E-31 1.9E-35 278.2 35.0 348 87-522 8-360 (363)
27 PTZ00094 serine hydroxymethylt 100.0 3.2E-31 6.9E-36 288.8 32.3 362 87-544 44-426 (452)
28 PRK02769 histidine decarboxyla 100.0 2.2E-30 4.8E-35 274.2 34.8 336 79-524 24-372 (380)
29 cd00611 PSAT_like Phosphoserin 100.0 8.9E-32 1.9E-36 284.5 23.5 337 87-522 8-354 (355)
30 PRK13479 2-aminoethylphosphona 100.0 2.1E-28 4.6E-33 260.4 35.2 349 87-525 10-364 (368)
31 cd06450 DOPA_deC_like DOPA dec 100.0 2.4E-29 5.2E-34 265.1 27.5 309 113-520 30-344 (345)
32 PLN03032 serine decarboxylase; 100.0 2.3E-28 5.1E-33 256.9 32.9 324 93-521 39-373 (374)
33 PRK13520 L-tyrosine decarboxyl 100.0 5.6E-28 1.2E-32 257.3 34.6 334 80-523 24-370 (371)
34 TIGR01364 serC_1 phosphoserine 100.0 1.2E-28 2.6E-33 259.0 28.6 335 88-524 2-348 (349)
35 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 5.5E-28 1.2E-32 255.6 33.6 320 119-521 29-354 (355)
36 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.8E-27 3.9E-32 254.8 35.8 348 85-524 28-381 (387)
37 COG0075 Serine-pyruvate aminot 100.0 1.5E-27 3.3E-32 246.6 33.3 329 115-526 32-365 (383)
38 PRK05355 3-phosphoserine/phosp 100.0 3.6E-28 7.8E-33 256.7 27.8 339 84-524 9-358 (360)
39 TIGR03812 tyr_de_CO2_Arch tyro 100.0 7E-27 1.5E-31 249.1 37.4 353 52-520 3-372 (373)
40 TIGR01366 serC_3 phosphoserine 100.0 6.7E-28 1.4E-32 255.0 27.5 338 89-524 14-360 (361)
41 PRK04366 glycine dehydrogenase 100.0 3.2E-26 7E-31 250.8 38.1 359 88-527 81-451 (481)
42 COG3844 Kynureninase [Amino ac 100.0 6.2E-27 1.3E-31 228.9 27.8 379 52-525 16-403 (407)
43 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.9E-26 4.1E-31 244.8 33.5 344 87-522 11-360 (361)
44 cd00613 GDC-P Glycine cleavage 100.0 4E-26 8.6E-31 245.5 34.2 354 78-518 22-398 (398)
45 TIGR03799 NOD_PanD_pyr putativ 100.0 1.6E-25 3.4E-30 245.0 39.0 289 113-421 121-439 (522)
46 PLN02880 tyrosine decarboxylas 100.0 8.4E-26 1.8E-30 246.7 35.2 403 47-525 58-485 (490)
47 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 9.9E-26 2.1E-30 239.9 34.8 346 85-524 16-368 (370)
48 PLN02414 glycine dehydrogenase 100.0 5.2E-26 1.1E-30 261.3 34.2 356 105-544 551-941 (993)
49 PLN02590 probable tyrosine dec 100.0 4.6E-25 9.9E-30 241.0 39.8 414 43-527 102-535 (539)
50 PRK00451 glycine dehydrogenase 99.9 6.7E-26 1.4E-30 247.4 30.2 322 117-522 108-446 (447)
51 PRK05937 8-amino-7-oxononanoat 99.9 1.8E-25 4E-30 237.9 32.2 330 80-525 14-351 (370)
52 COG0436 Aspartate/tyrosine/aro 99.9 3.4E-25 7.4E-30 235.8 32.8 344 77-524 29-391 (393)
53 PRK05957 aspartate aminotransf 99.9 8.3E-25 1.8E-29 234.5 32.8 344 77-524 28-385 (389)
54 PRK06207 aspartate aminotransf 99.9 2.1E-24 4.6E-29 232.4 35.0 364 56-524 19-402 (405)
55 PLN02263 serine decarboxylase 99.9 5.3E-24 1.1E-28 227.0 37.4 383 15-523 47-442 (470)
56 TIGR01822 2am3keto_CoA 2-amino 99.9 8.7E-25 1.9E-29 234.7 31.5 327 90-524 54-389 (393)
57 PRK06108 aspartate aminotransf 99.9 2.1E-24 4.5E-29 230.9 32.0 337 78-523 26-381 (382)
58 TIGR01141 hisC histidinol-phos 99.9 6.9E-25 1.5E-29 231.4 27.1 324 73-519 16-346 (346)
59 PRK07179 hypothetical protein; 99.9 2.8E-24 6.2E-29 231.8 31.3 323 90-525 70-399 (407)
60 cd06454 KBL_like KBL_like; thi 99.9 2.3E-24 5E-29 227.4 28.7 325 90-521 17-348 (349)
61 cd00378 SHMT Serine-glycine hy 99.9 5.2E-24 1.1E-28 229.4 30.5 346 84-526 26-387 (402)
62 PRK03158 histidinol-phosphate 99.9 2.5E-24 5.4E-29 228.4 27.5 321 77-521 30-358 (359)
63 PRK08056 threonine-phosphate d 99.9 7.5E-24 1.6E-28 224.4 31.0 322 77-524 21-355 (356)
64 PRK00950 histidinol-phosphate 99.9 5.3E-24 1.1E-28 226.0 29.7 323 77-522 35-360 (361)
65 TIGR01437 selA_rel uncharacter 99.9 8.1E-24 1.8E-28 224.2 30.8 316 87-521 23-362 (363)
66 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.7E-24 1.2E-28 224.8 29.6 321 122-519 19-352 (352)
67 PRK06225 aspartate aminotransf 99.9 5E-24 1.1E-28 227.8 29.3 339 77-526 29-378 (380)
68 PRK07681 aspartate aminotransf 99.9 1.4E-23 2.9E-28 225.9 32.2 333 78-521 34-385 (399)
69 PRK04870 histidinol-phosphate 99.9 5.4E-24 1.2E-28 225.6 28.6 325 76-521 26-355 (356)
70 KOG2862 Alanine-glyoxylate ami 99.9 1.8E-23 4E-28 203.4 29.3 334 115-525 44-383 (385)
71 PRK08960 hypothetical protein; 99.9 1.1E-23 2.3E-28 225.8 30.8 335 77-522 33-385 (387)
72 PRK14807 histidinol-phosphate 99.9 3.6E-23 7.8E-28 218.8 33.3 324 78-522 24-350 (351)
73 PRK09105 putative aminotransfe 99.9 1.1E-23 2.5E-28 223.9 29.5 321 76-522 43-368 (370)
74 PRK00011 glyA serine hydroxyme 99.9 1.9E-23 4.1E-28 226.1 31.7 349 78-524 27-389 (416)
75 PLN02483 serine palmitoyltrans 99.9 1.6E-23 3.5E-28 229.5 31.2 312 115-525 140-467 (489)
76 TIGR03540 DapC_direct LL-diami 99.9 3.5E-23 7.5E-28 221.6 32.7 337 77-519 30-381 (383)
77 PRK08361 aspartate aminotransf 99.9 3.2E-23 6.9E-28 222.4 31.6 325 89-524 47-390 (391)
78 PRK13392 5-aminolevulinate syn 99.9 2.3E-23 4.9E-28 225.0 29.9 344 76-524 47-397 (410)
79 PRK02731 histidinol-phosphate 99.9 1.5E-23 3.3E-28 223.1 27.7 312 90-523 47-365 (367)
80 PRK09276 LL-diaminopimelate am 99.9 6.1E-23 1.3E-27 219.8 32.1 337 78-519 33-383 (385)
81 PRK07324 transaminase; Validat 99.9 2.7E-23 5.8E-28 221.4 28.6 298 123-524 64-370 (373)
82 PRK07908 hypothetical protein; 99.9 5E-23 1.1E-27 217.6 30.3 321 76-525 22-348 (349)
83 PLN02414 glycine dehydrogenase 99.9 4.9E-23 1.1E-27 236.9 32.5 347 76-520 100-465 (993)
84 PRK05387 histidinol-phosphate 99.9 3.2E-23 6.9E-28 219.4 28.5 323 77-523 25-352 (353)
85 PRK05764 aspartate aminotransf 99.9 1.3E-22 2.8E-27 218.0 33.1 333 89-524 45-391 (393)
86 PRK06939 2-amino-3-ketobutyrat 99.9 9.7E-23 2.1E-27 219.0 32.0 329 89-525 57-394 (397)
87 PRK01533 histidinol-phosphate 99.9 3.4E-23 7.4E-28 219.9 28.0 320 77-527 30-358 (366)
88 PRK05942 aspartate aminotransf 99.9 7.6E-23 1.7E-27 219.7 31.0 300 121-525 77-390 (394)
89 PLN03026 histidinol-phosphate 99.9 9.7E-23 2.1E-27 217.6 31.4 324 77-521 53-379 (380)
90 TIGR00858 bioF 8-amino-7-oxono 99.9 6.8E-23 1.5E-27 217.0 29.4 323 89-519 31-360 (360)
91 PF00282 Pyridoxal_deC: Pyrido 99.9 1.2E-22 2.6E-27 214.8 30.6 346 47-420 15-373 (373)
92 PLN00175 aminotransferase fami 99.9 2E-22 4.3E-27 217.5 32.8 333 89-523 68-412 (413)
93 PRK08363 alanine aminotransfer 99.9 1.7E-22 3.6E-27 217.4 32.1 343 77-524 31-394 (398)
94 PRK07682 hypothetical protein; 99.9 1.4E-22 2.9E-27 216.6 31.1 329 90-524 35-376 (378)
95 COG0079 HisC Histidinol-phosph 99.9 8.8E-23 1.9E-27 213.8 28.8 330 72-524 18-354 (356)
96 PRK05367 glycine dehydrogenase 99.9 9.7E-22 2.1E-26 227.4 40.1 383 78-544 501-909 (954)
97 TIGR01821 5aminolev_synth 5-am 99.9 1.8E-22 3.8E-27 217.5 31.5 343 78-525 48-397 (402)
98 PLN00145 tyrosine/nicotianamin 99.9 3.2E-22 7E-27 216.7 33.6 349 77-526 53-426 (430)
99 PLN02721 threonine aldolase 99.9 7.4E-23 1.6E-27 216.3 27.9 295 123-523 42-351 (353)
100 PRK05958 8-amino-7-oxononanoat 99.9 1.5E-22 3.2E-27 216.6 29.9 333 80-521 41-384 (385)
101 TIGR03537 DapC succinyldiamino 99.9 3.5E-22 7.7E-27 211.1 32.2 323 90-520 15-349 (350)
102 PRK08153 histidinol-phosphate 99.9 2.6E-22 5.6E-27 213.7 31.3 328 77-527 33-368 (369)
103 PRK08912 hypothetical protein; 99.9 1.7E-22 3.7E-27 216.5 29.8 334 89-523 40-385 (387)
104 PLN02187 rooty/superroot1 99.9 5E-22 1.1E-26 216.8 33.1 348 75-526 65-440 (462)
105 PRK06290 aspartate aminotransf 99.9 8.4E-22 1.8E-26 212.2 34.5 346 78-525 46-406 (410)
106 PRK13393 5-aminolevulinate syn 99.9 3.8E-22 8.3E-27 215.1 31.5 345 76-525 46-397 (406)
107 PRK15481 transcriptional regul 99.9 9.9E-23 2.1E-27 221.4 27.1 295 123-523 123-430 (431)
108 PRK11658 UDP-4-amino-4-deoxy-L 99.9 6.2E-22 1.4E-26 211.2 32.7 336 122-523 34-378 (379)
109 PRK09064 5-aminolevulinate syn 99.9 4.9E-22 1.1E-26 214.4 32.1 335 84-524 57-397 (407)
110 COG1168 MalY Bifunctional PLP- 99.9 3.9E-22 8.5E-27 200.9 28.9 333 88-524 38-386 (388)
111 PTZ00377 alanine aminotransfer 99.9 5.3E-22 1.1E-26 218.3 32.8 352 82-525 82-476 (481)
112 PTZ00433 tyrosine aminotransfe 99.9 6.5E-22 1.4E-26 213.7 32.8 330 89-525 51-409 (412)
113 PRK08068 transaminase; Reviewe 99.9 5.5E-22 1.2E-26 212.7 31.7 338 77-519 33-384 (389)
114 PRK07366 succinyldiaminopimela 99.9 4.3E-22 9.4E-27 213.5 30.8 336 78-521 32-387 (388)
115 PRK13355 bifunctional HTH-doma 99.9 4.6E-22 9.9E-27 220.7 31.9 339 77-524 147-514 (517)
116 PRK12566 glycine dehydrogenase 99.9 3.4E-22 7.4E-27 225.6 30.7 350 116-544 538-909 (954)
117 TIGR01329 cysta_beta_ly_E cyst 99.9 6.7E-23 1.4E-27 218.1 23.4 302 122-523 48-374 (378)
118 PRK08064 cystathionine beta-ly 99.9 9E-23 2E-27 218.0 24.4 306 118-521 51-383 (390)
119 PRK12414 putative aminotransfe 99.9 6.1E-22 1.3E-26 212.0 30.7 340 78-520 31-383 (384)
120 PRK06348 aspartate aminotransf 99.9 9E-22 2E-26 210.7 32.1 300 122-521 71-382 (384)
121 PRK07683 aminotransferase A; V 99.9 1.3E-21 2.7E-26 209.8 33.1 338 77-524 29-383 (387)
122 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.7E-22 1.2E-26 212.3 30.1 322 89-524 48-381 (385)
123 PRK01688 histidinol-phosphate 99.9 5.7E-23 1.2E-27 217.2 22.0 285 124-519 60-351 (351)
124 PLN03226 serine hydroxymethylt 99.9 2.3E-21 5E-26 210.9 34.8 356 87-524 44-419 (475)
125 PRK09265 aminotransferase AlaT 99.9 1.1E-21 2.5E-26 211.3 32.1 341 77-524 34-401 (404)
126 TIGR01265 tyr_nico_aTase tyros 99.9 1E-21 2.2E-26 211.6 31.4 342 77-524 32-401 (403)
127 TIGR01264 tyr_amTase_E tyrosin 99.9 6.9E-22 1.5E-26 212.8 30.0 342 77-524 32-399 (401)
128 cd00609 AAT_like Aspartate ami 99.9 1.9E-22 4E-27 212.2 25.0 294 123-519 38-349 (350)
129 PRK07337 aminotransferase; Val 99.9 9.6E-22 2.1E-26 210.8 30.8 342 77-521 31-386 (388)
130 PRK04635 histidinol-phosphate 99.9 1.4E-22 3.1E-27 214.5 23.9 283 123-520 62-351 (354)
131 PRK13580 serine hydroxymethylt 99.9 1.3E-21 2.8E-26 209.2 31.2 351 87-524 59-445 (493)
132 cd06502 TA_like Low-specificit 99.9 1.5E-22 3.3E-27 212.6 23.9 315 89-520 10-337 (338)
133 PRK07568 aspartate aminotransf 99.9 2.1E-21 4.6E-26 208.8 33.1 337 77-524 31-392 (397)
134 PRK05166 histidinol-phosphate 99.9 1.3E-21 2.8E-26 208.5 31.1 287 125-523 75-370 (371)
135 PRK08134 O-acetylhomoserine am 99.9 7E-22 1.5E-26 212.9 29.0 334 117-520 60-427 (433)
136 COG0076 GadB Glutamate decarbo 99.9 4.8E-21 1E-25 206.2 35.4 335 49-421 38-381 (460)
137 PRK07777 aminotransferase; Val 99.9 8.7E-22 1.9E-26 211.1 29.5 334 90-524 39-386 (387)
138 PRK07309 aromatic amino acid a 99.9 3.2E-21 7E-26 206.9 33.6 344 78-524 32-388 (391)
139 PLN00143 tyrosine/nicotianamin 99.9 6.1E-21 1.3E-25 205.8 35.9 364 51-523 15-403 (409)
140 PRK07392 threonine-phosphate d 99.9 2.1E-21 4.5E-26 206.1 31.6 326 77-524 23-359 (360)
141 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.6E-21 5.7E-26 206.8 32.6 340 123-521 31-379 (380)
142 TIGR03538 DapC_gpp succinyldia 99.9 1.8E-21 3.8E-26 209.1 31.3 342 77-521 29-392 (393)
143 PRK06107 aspartate aminotransf 99.9 2.3E-21 5E-26 208.7 32.2 337 90-525 48-401 (402)
144 PLN02822 serine palmitoyltrans 99.9 2.9E-21 6.2E-26 211.4 32.9 339 89-524 124-477 (481)
145 PRK03321 putative aminotransfe 99.9 5.6E-22 1.2E-26 209.8 26.1 320 77-523 23-350 (352)
146 PRK06358 threonine-phosphate d 99.9 4E-21 8.8E-26 203.3 32.4 309 90-522 34-353 (354)
147 PRK06767 methionine gamma-lyas 99.9 9.8E-22 2.1E-26 210.0 27.6 303 122-518 62-383 (386)
148 PRK07504 O-succinylhomoserine 99.9 1E-21 2.3E-26 210.3 27.5 341 77-519 30-394 (398)
149 PLN02376 1-aminocyclopropane-1 99.9 3.1E-21 6.8E-26 211.8 31.7 357 77-524 47-438 (496)
150 PRK09082 methionine aminotrans 99.9 1.3E-21 2.9E-26 209.5 28.1 329 89-520 44-385 (386)
151 PRK13034 serine hydroxymethylt 99.9 5.5E-21 1.2E-25 206.0 32.2 343 87-524 38-392 (416)
152 PRK09147 succinyldiaminopimela 99.9 4.5E-21 9.7E-26 206.2 31.2 340 77-522 30-394 (396)
153 PRK07550 hypothetical protein; 99.9 5.3E-21 1.2E-25 204.9 31.7 328 89-521 43-384 (386)
154 PRK08861 cystathionine gamma-s 99.9 1.6E-21 3.5E-26 207.2 27.2 310 121-523 53-386 (388)
155 TIGR00461 gcvP glycine dehydro 99.9 1.2E-20 2.6E-25 214.6 34.9 354 115-544 524-901 (939)
156 PRK09148 aminotransferase; Val 99.9 8.2E-21 1.8E-25 204.6 32.1 346 78-524 32-390 (405)
157 PF00155 Aminotran_1_2: Aminot 99.9 1.7E-21 3.7E-26 206.9 25.9 298 123-518 46-363 (363)
158 COG1167 ARO8 Transcriptional r 99.9 2.9E-21 6.2E-26 210.2 28.2 308 118-525 133-456 (459)
159 PRK06836 aspartate aminotransf 99.9 2E-20 4.3E-25 201.0 34.1 325 88-524 46-391 (394)
160 PRK08636 aspartate aminotransf 99.9 1E-20 2.3E-25 203.7 31.8 336 89-524 47-400 (403)
161 COG0156 BioF 7-keto-8-aminopel 99.9 1.1E-20 2.4E-25 197.6 30.8 335 78-521 42-387 (388)
162 COG0399 WecE Predicted pyridox 99.9 1.3E-20 2.9E-25 195.5 31.2 331 122-524 35-373 (374)
163 PRK02610 histidinol-phosphate 99.9 1.4E-20 2.9E-25 200.8 32.3 331 77-525 29-372 (374)
164 PRK05367 glycine dehydrogenase 99.9 7.4E-21 1.6E-25 220.1 32.4 309 115-519 115-437 (954)
165 PLN02656 tyrosine transaminase 99.9 1E-20 2.2E-25 204.2 31.2 340 77-524 32-403 (409)
166 PLN02452 phosphoserine transam 99.9 1E-20 2.2E-25 199.2 30.1 335 87-524 16-363 (365)
167 PRK03317 histidinol-phosphate 99.9 6.6E-21 1.4E-25 202.9 29.1 324 78-523 28-363 (368)
168 PRK04781 histidinol-phosphate 99.9 6.5E-21 1.4E-25 202.4 28.4 292 123-523 61-362 (364)
169 TIGR01140 L_thr_O3P_dcar L-thr 99.9 4E-21 8.7E-26 201.4 26.4 276 124-519 50-330 (330)
170 PRK03967 histidinol-phosphate 99.9 1.1E-20 2.5E-25 198.5 29.8 201 77-315 19-222 (337)
171 PRK05968 hypothetical protein; 99.9 2.6E-21 5.7E-26 206.7 25.3 307 120-521 62-387 (389)
172 PRK08776 cystathionine gamma-s 99.9 7.2E-21 1.6E-25 203.9 28.0 308 121-520 60-390 (405)
173 PRK08133 O-succinylhomoserine 99.9 5.9E-21 1.3E-25 204.1 27.3 306 120-522 60-388 (390)
174 PRK05839 hypothetical protein; 99.9 1.6E-20 3.4E-25 200.3 30.5 330 77-523 25-373 (374)
175 TIGR03542 DAPAT_plant LL-diami 99.9 1.2E-20 2.5E-25 203.3 29.6 342 77-521 34-401 (402)
176 PLN02271 serine hydroxymethylt 99.9 5.3E-20 1.2E-24 197.3 33.8 357 87-523 158-539 (586)
177 PRK08249 cystathionine gamma-s 99.9 8.7E-21 1.9E-25 202.9 27.0 311 115-520 58-393 (398)
178 PRK08045 cystathionine gamma-s 99.9 1.4E-20 3.1E-25 200.5 28.5 306 121-520 52-382 (386)
179 KOG0257 Kynurenine aminotransf 99.9 3.3E-21 7.1E-26 196.1 22.2 314 87-465 43-384 (420)
180 PRK08175 aminotransferase; Val 99.9 3.7E-20 8E-25 199.0 31.4 337 88-524 42-389 (395)
181 PLN02450 1-aminocyclopropane-1 99.9 2.4E-20 5.1E-25 204.0 30.3 352 77-524 39-430 (468)
182 PRK06425 histidinol-phosphate 99.9 1.6E-20 3.5E-25 197.0 27.8 283 123-522 42-331 (332)
183 PRK06460 hypothetical protein; 99.9 9.3E-21 2E-25 201.6 26.1 312 115-523 39-373 (376)
184 PLN03227 serine palmitoyltrans 99.9 5.9E-20 1.3E-24 196.6 32.1 343 91-525 15-383 (392)
185 cd00614 CGS_like CGS_like: Cys 99.9 1E-20 2.2E-25 201.3 25.7 311 115-522 34-368 (369)
186 PRK07811 cystathionine gamma-s 99.9 1.1E-20 2.3E-25 202.0 25.9 303 121-518 61-386 (388)
187 PLN02509 cystathionine beta-ly 99.9 1.3E-20 2.7E-25 203.7 26.6 306 121-524 133-461 (464)
188 PRK14809 histidinol-phosphate 99.9 4.8E-20 1E-24 195.4 30.7 319 77-523 31-356 (357)
189 PRK07812 O-acetylhomoserine am 99.9 5.4E-20 1.2E-24 198.1 31.3 328 121-528 69-435 (436)
190 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.8E-20 1.3E-24 195.4 30.9 333 121-522 31-375 (376)
191 TIGR01328 met_gam_lyase methio 99.9 1.1E-20 2.3E-25 202.1 25.0 306 121-523 59-389 (391)
192 PLN02607 1-aminocyclopropane-1 99.9 6E-20 1.3E-24 199.4 31.2 354 77-526 48-439 (447)
193 PRK06234 methionine gamma-lyas 99.9 2.9E-20 6.3E-25 199.4 28.1 309 122-521 65-398 (400)
194 PRK07503 methionine gamma-lyas 99.9 1.5E-20 3.2E-25 201.7 25.6 312 121-523 65-399 (403)
195 PRK08574 cystathionine gamma-s 99.9 1.6E-20 3.5E-25 200.2 25.0 305 120-518 52-382 (385)
196 PRK05613 O-acetylhomoserine am 99.9 2.9E-20 6.2E-25 200.3 26.8 165 116-314 64-234 (437)
197 PRK06855 aminotransferase; Val 99.9 9.2E-20 2E-24 198.0 30.5 349 88-524 48-429 (433)
198 TIGR02080 O_succ_thio_ly O-suc 99.9 3.6E-20 7.9E-25 197.2 26.4 305 122-523 52-380 (382)
199 TIGR01325 O_suc_HS_sulf O-succ 99.9 4.1E-20 8.8E-25 197.2 26.3 303 120-520 53-378 (380)
200 PRK07671 cystathionine beta-ly 99.9 4.5E-20 9.9E-25 196.2 25.5 304 120-521 49-375 (377)
201 PRK08248 O-acetylhomoserine am 99.9 6.8E-20 1.5E-24 197.6 27.1 158 121-313 64-226 (431)
202 PRK07590 L,L-diaminopimelate a 99.9 1.2E-19 2.7E-24 195.8 29.2 344 77-521 35-408 (409)
203 cd00615 Orn_deC_like Ornithine 99.9 4.8E-21 1E-25 197.5 17.0 223 120-396 58-293 (294)
204 PRK08114 cystathionine beta-ly 99.9 5.8E-20 1.2E-24 194.6 25.3 236 117-421 58-317 (395)
205 PLN02231 alanine transaminase 99.9 2.5E-19 5.4E-24 198.0 31.4 316 123-524 170-527 (534)
206 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.4E-19 5.2E-24 188.4 29.7 280 120-521 53-344 (346)
207 PLN02955 8-amino-7-oxononanoat 99.9 2.2E-19 4.7E-24 192.1 29.5 334 90-524 118-461 (476)
208 TIGR01365 serC_2 phosphoserine 99.9 2E-19 4.3E-24 189.4 28.6 331 114-523 32-372 (374)
209 PRK06176 cystathionine gamma-s 99.9 6.7E-20 1.5E-24 195.0 25.3 303 120-522 49-376 (380)
210 TIGR03811 tyr_de_CO2_Ent tyros 99.9 1.4E-18 3.1E-23 191.8 36.4 430 51-524 62-602 (608)
211 PRK14808 histidinol-phosphate 99.9 1.5E-19 3.3E-24 189.7 27.3 310 76-521 19-334 (335)
212 PRK05994 O-acetylhomoserine am 99.9 3.7E-19 8E-24 192.1 30.5 331 122-522 64-424 (427)
213 PRK07505 hypothetical protein; 99.9 4.6E-19 1E-23 190.9 30.9 350 64-525 35-400 (402)
214 PRK09028 cystathionine beta-ly 99.9 1.7E-19 3.6E-24 191.6 27.0 301 123-519 63-386 (394)
215 PRK07865 N-succinyldiaminopime 99.9 2.4E-19 5.3E-24 190.5 28.3 285 120-519 65-363 (364)
216 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 5.3E-19 1.1E-23 188.6 30.6 331 121-522 31-374 (375)
217 PRK06084 O-acetylhomoserine am 99.9 1.7E-19 3.8E-24 194.2 27.2 326 121-523 58-421 (425)
218 PF01041 DegT_DnrJ_EryC1: DegT 99.9 3.3E-19 7.2E-24 189.3 28.7 327 121-519 25-363 (363)
219 PLN02672 methionine S-methyltr 99.9 7.2E-19 1.6E-23 203.0 33.5 351 77-523 698-1079(1082)
220 PLN02242 methionine gamma-lyas 99.9 2.8E-19 6.1E-24 192.2 28.3 315 115-523 70-414 (418)
221 TIGR01324 cysta_beta_ly_B cyst 99.9 1.5E-19 3.3E-24 191.8 25.7 302 121-519 50-375 (377)
222 PRK06959 putative threonine-ph 99.9 1.5E-19 3.2E-24 190.1 25.4 276 124-526 56-335 (339)
223 TIGR03539 DapC_actino succinyl 99.9 2E-19 4.2E-24 190.7 26.4 309 88-518 34-356 (357)
224 PRK07582 cystathionine gamma-l 99.9 1.2E-19 2.6E-24 192.5 24.6 291 122-520 52-365 (366)
225 PRK07810 O-succinylhomoserine 99.8 2.1E-19 4.6E-24 192.6 26.7 307 121-521 70-401 (403)
226 PRK05939 hypothetical protein; 99.8 2.1E-19 4.5E-24 192.1 26.3 158 120-312 46-207 (397)
227 PRK13238 tnaA tryptophanase/L- 99.8 3.7E-19 8E-24 193.3 28.1 342 123-543 80-451 (460)
228 PRK04311 selenocysteine syntha 99.8 1.4E-18 3.1E-23 187.7 32.5 205 77-315 86-309 (464)
229 PRK07269 cystathionine gamma-s 99.8 1.6E-19 3.5E-24 190.9 24.2 298 121-522 54-362 (364)
230 PRK08247 cystathionine gamma-s 99.8 4.6E-19 1E-23 188.2 27.7 230 120-420 51-288 (366)
231 TIGR00474 selA seryl-tRNA(sec) 99.8 3.3E-18 7.1E-23 184.5 34.2 205 77-315 81-304 (454)
232 PRK06702 O-acetylhomoserine am 99.8 9.7E-19 2.1E-23 187.4 28.5 336 121-527 61-427 (432)
233 PRK05664 threonine-phosphate d 99.8 9E-19 2E-23 183.6 27.7 273 124-524 52-328 (330)
234 PRK12462 phosphoserine aminotr 99.8 2.4E-18 5.1E-23 179.4 29.7 338 87-524 13-362 (364)
235 PRK15407 lipopolysaccharide bi 99.8 2.3E-18 5.1E-23 186.2 30.6 349 123-523 65-435 (438)
236 PRK00854 rocD ornithine--oxo-a 99.8 9E-18 2E-22 180.9 33.0 342 66-523 32-400 (401)
237 cd00610 OAT_like Acetyl ornith 99.8 5.1E-18 1.1E-22 183.4 30.7 349 67-521 28-412 (413)
238 PRK03244 argD acetylornithine 99.8 1.2E-17 2.5E-22 179.8 33.2 337 65-525 33-395 (398)
239 PRK08354 putative aminotransfe 99.8 1.1E-17 2.3E-22 174.1 31.5 184 77-311 9-196 (311)
240 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 3.8E-18 8.1E-23 184.2 28.8 159 121-314 57-220 (418)
241 PRK07050 cystathionine beta-ly 99.8 1.6E-18 3.6E-23 185.3 25.6 161 119-314 63-229 (394)
242 PRK10534 L-threonine aldolase; 99.8 1.6E-18 3.6E-23 181.9 24.8 309 89-523 12-332 (333)
243 KOG0259 Tyrosine aminotransfer 99.8 1.4E-17 3.1E-22 166.7 28.5 335 88-524 78-433 (447)
244 TIGR03801 asp_4_decarbox aspar 99.8 9.9E-18 2.1E-22 182.9 29.8 338 128-524 140-516 (521)
245 PRK07049 methionine gamma-lyas 99.8 8.8E-18 1.9E-22 181.3 28.7 310 122-523 84-425 (427)
246 KOG1368 Threonine aldolase [Am 99.8 2.8E-18 6E-23 166.4 22.0 291 123-519 58-363 (384)
247 PRK04073 rocD ornithine--oxo-a 99.8 2.4E-17 5.1E-22 177.2 31.8 337 64-522 29-395 (396)
248 PRK09275 aspartate aminotransf 99.8 1.1E-17 2.4E-22 182.7 28.9 322 140-524 162-517 (527)
249 PRK05967 cystathionine beta-ly 99.8 7.8E-18 1.7E-22 178.6 26.8 309 119-520 62-391 (395)
250 KOG0629 Glutamate decarboxylas 99.8 3.3E-18 7.2E-23 173.2 21.7 345 49-421 80-435 (510)
251 COG0112 GlyA Glycine/serine hy 99.8 2.5E-17 5.4E-22 166.8 27.7 342 88-526 37-392 (413)
252 cd00617 Tnase_like Tryptophana 99.8 2.6E-17 5.6E-22 176.6 28.9 341 123-543 55-426 (431)
253 PRK09440 avtA valine--pyruvate 99.8 1.8E-17 3.9E-22 179.4 27.9 313 120-526 77-413 (416)
254 PTZ00125 ornithine aminotransf 99.8 1.8E-16 3.8E-21 170.8 35.2 344 64-525 20-396 (400)
255 PRK06434 cystathionine gamma-l 99.8 8.3E-18 1.8E-22 178.3 24.3 302 119-521 62-381 (384)
256 PRK01278 argD acetylornithine 99.8 1.1E-16 2.4E-21 171.7 33.2 341 64-524 20-388 (389)
257 PTZ00376 aspartate aminotransf 99.8 8.2E-18 1.8E-22 181.3 24.3 293 123-524 74-403 (404)
258 KOG3846 L-kynurenine hydrolase 99.8 2.1E-17 4.5E-22 160.7 23.5 395 51-525 35-462 (465)
259 COG2873 MET17 O-acetylhomoseri 99.8 7.7E-17 1.7E-21 161.5 28.1 325 121-523 62-424 (426)
260 cd01494 AAT_I Aspartate aminot 99.8 4E-18 8.7E-23 159.8 17.9 166 123-312 2-170 (170)
261 COG1003 GcvP Glycine cleavage 99.8 1.3E-16 2.7E-21 162.7 29.2 341 105-527 92-450 (496)
262 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.5E-17 7.5E-22 173.2 26.4 312 114-522 48-385 (386)
263 COG2008 GLY1 Threonine aldolas 99.8 3E-17 6.4E-22 165.6 24.5 300 116-522 30-341 (342)
264 TIGR00707 argD acetylornithine 99.8 8.7E-17 1.9E-21 171.8 29.1 339 66-521 18-378 (379)
265 KOG1359 Glycine C-acetyltransf 99.8 3.2E-17 6.9E-22 158.6 22.2 335 78-524 70-412 (417)
266 PRK09257 aromatic amino acid a 99.8 3.4E-17 7.4E-22 176.1 25.1 170 123-311 71-260 (396)
267 KOG1360 5-aminolevulinate synt 99.8 1.2E-16 2.7E-21 160.3 26.7 345 76-526 172-526 (570)
268 TIGR03531 selenium_SpcS O-phos 99.8 9.1E-17 2E-21 172.0 27.7 242 119-406 103-355 (444)
269 COG1103 Archaea-specific pyrid 99.8 1.3E-16 2.9E-21 152.8 24.8 170 122-315 62-235 (382)
270 PRK02627 acetylornithine amino 99.8 6.7E-16 1.4E-20 166.0 32.2 335 65-524 29-394 (396)
271 PRK02936 argD acetylornithine 99.8 1.8E-15 4E-20 161.6 33.8 329 64-521 18-376 (377)
272 PRK08637 hypothetical protein; 99.8 2.9E-16 6.3E-21 168.4 26.8 303 123-525 46-387 (388)
273 PLN02397 aspartate transaminas 99.7 2.3E-16 4.9E-21 170.8 25.6 252 177-523 140-420 (423)
274 PRK04260 acetylornithine amino 99.7 2.4E-15 5.2E-20 160.5 33.0 334 64-521 18-374 (375)
275 PLN02368 alanine transaminase 99.7 2.3E-16 5E-21 169.3 24.5 247 120-418 110-393 (407)
276 COG4992 ArgD Ornithine/acetylo 99.7 4.5E-15 9.7E-20 152.8 32.1 342 64-526 31-400 (404)
277 PF00464 SHMT: Serine hydroxym 99.7 1.5E-16 3.1E-21 167.1 19.3 347 87-518 30-399 (399)
278 TIGR03246 arg_catab_astC succi 99.7 7.2E-15 1.6E-19 158.0 32.5 346 64-524 24-395 (397)
279 COG0626 MetC Cystathionine bet 99.7 2E-15 4.2E-20 158.0 26.4 307 120-519 62-393 (396)
280 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.3E-16 2.7E-21 168.2 17.0 286 121-458 66-398 (417)
281 TIGR01885 Orn_aminotrans ornit 99.7 1.7E-14 3.7E-19 155.4 33.4 346 66-522 28-400 (401)
282 KOG1357 Serine palmitoyltransf 99.7 4.9E-16 1.1E-20 158.8 19.6 343 80-529 146-507 (519)
283 PLN02624 ornithine-delta-amino 99.7 3E-14 6.4E-19 156.1 33.9 346 65-524 65-444 (474)
284 PRK05093 argD bifunctional N-s 99.7 2.3E-14 4.9E-19 154.5 31.5 345 64-524 29-400 (403)
285 PRK15029 arginine decarboxylas 99.7 9.4E-15 2E-19 164.6 29.1 173 121-314 205-402 (755)
286 KOG0256 1-aminocyclopropane-1- 99.7 5.2E-15 1.1E-19 149.8 24.0 310 123-523 123-460 (471)
287 KOG0634 Aromatic amino acid am 99.7 9.4E-15 2E-19 149.1 26.0 326 118-524 101-466 (472)
288 TIGR00461 gcvP glycine dehydro 99.7 3.7E-14 7.9E-19 162.1 31.4 310 115-519 103-426 (939)
289 COG1932 SerC Phosphoserine ami 99.7 1.4E-14 3E-19 146.2 24.5 343 85-524 10-363 (365)
290 PRK12381 bifunctional succinyl 99.7 5.5E-14 1.2E-18 151.5 30.8 344 64-525 28-400 (406)
291 PRK03715 argD acetylornithine 99.7 2.6E-13 5.6E-18 145.4 34.3 343 64-524 25-393 (395)
292 PRK05964 adenosylmethionine--8 99.7 5.1E-14 1.1E-18 152.6 29.0 358 64-524 31-422 (423)
293 KOG0053 Cystathionine beta-lya 99.7 9.7E-15 2.1E-19 150.8 22.0 158 123-315 79-243 (409)
294 PLN00144 acetylornithine trans 99.7 2.3E-13 4.9E-18 145.4 33.5 343 65-525 5-381 (382)
295 KOG1383 Glutamate decarboxylas 99.6 1.2E-13 2.6E-18 142.5 26.1 282 118-458 117-411 (491)
296 PRK13578 ornithine decarboxyla 99.6 2.8E-13 6.1E-18 151.3 31.0 328 121-524 174-565 (720)
297 TIGR02407 ectoine_ectB diamino 99.6 9.6E-13 2.1E-17 141.9 34.3 348 64-523 24-411 (412)
298 PRK15400 lysine decarboxylase 99.6 2.3E-13 5E-18 151.9 30.2 318 120-525 194-560 (714)
299 PRK15399 lysine decarboxylase 99.6 8.2E-13 1.8E-17 147.5 34.3 316 121-524 195-559 (713)
300 KOG0628 Aromatic-L-amino-acid/ 99.6 9.2E-13 2E-17 135.6 31.8 401 43-528 45-475 (511)
301 PRK08117 4-aminobutyrate amino 99.6 1E-12 2.2E-17 142.9 33.3 359 64-525 32-430 (433)
302 TIGR02618 tyr_phenol_ly tyrosi 99.6 2.6E-13 5.7E-18 143.7 27.4 328 123-537 73-438 (450)
303 PRK11522 putrescine--2-oxoglut 99.6 1.1E-12 2.4E-17 142.7 33.0 348 64-527 70-454 (459)
304 TIGR03372 putres_am_tran putre 99.6 2.1E-12 4.5E-17 139.7 34.3 339 67-521 67-441 (442)
305 PRK13237 tyrosine phenol-lyase 99.6 4.8E-13 1E-17 142.1 28.4 327 123-538 80-446 (460)
306 TIGR00700 GABAtrnsam 4-aminobu 99.6 3.6E-12 7.7E-17 138.0 35.3 356 64-523 22-419 (420)
307 PRK06541 hypothetical protein; 99.6 1.6E-12 3.4E-17 141.8 32.3 373 64-526 41-457 (460)
308 PRK08360 4-aminobutyrate amino 99.6 4.9E-12 1.1E-16 137.4 35.9 358 64-525 30-427 (443)
309 PRK04612 argD acetylornithine 99.6 3.7E-12 8E-17 137.0 33.5 349 64-524 29-403 (408)
310 PRK08088 4-aminobutyrate amino 99.6 4.3E-12 9.2E-17 137.7 34.0 357 64-524 30-423 (425)
311 PRK09792 4-aminobutyrate trans 99.6 4.1E-12 8.9E-17 137.4 33.4 356 64-523 29-420 (421)
312 PRK07495 4-aminobutyrate amino 99.6 1E-11 2.2E-16 134.3 36.4 356 64-525 29-422 (425)
313 KOG0633 Histidinol phosphate a 99.6 1.1E-13 2.3E-18 132.3 18.2 290 128-521 76-374 (375)
314 PRK06058 4-aminobutyrate amino 99.6 8.5E-12 1.8E-16 135.9 35.4 356 64-524 45-442 (443)
315 PRK06777 4-aminobutyrate amino 99.6 8.7E-12 1.9E-16 134.9 34.9 354 64-523 29-420 (421)
316 PLN02760 4-aminobutyrate:pyruv 99.6 2.4E-12 5.2E-17 141.5 30.7 372 64-525 78-492 (504)
317 COG0160 GabT 4-aminobutyrate a 99.6 1E-11 2.2E-16 131.8 33.5 352 77-525 55-446 (447)
318 TIGR00713 hemL glutamate-1-sem 99.6 4.1E-12 8.9E-17 137.9 30.6 349 64-524 37-422 (423)
319 PRK09221 beta alanine--pyruvat 99.5 1.1E-11 2.5E-16 134.7 33.0 363 64-524 38-443 (445)
320 COG3977 Alanine-alpha-ketoisov 99.5 3E-12 6.4E-17 124.9 24.5 323 119-527 76-414 (417)
321 PRK08593 4-aminobutyrate amino 99.5 4E-11 8.6E-16 130.5 36.5 356 64-525 31-430 (445)
322 PRK05769 4-aminobutyrate amino 99.5 5.6E-11 1.2E-15 129.2 37.5 349 66-524 45-439 (441)
323 PRK09264 diaminobutyrate--2-ox 99.5 3E-11 6.5E-16 130.9 34.7 348 64-525 28-417 (425)
324 PRK06173 adenosylmethionine--8 99.5 4.4E-11 9.5E-16 129.4 34.2 358 64-524 33-425 (429)
325 PRK12403 putative aminotransfe 99.5 6.2E-11 1.4E-15 129.4 35.3 229 64-315 43-309 (460)
326 PRK07678 aminotransferase; Val 99.5 4.8E-11 1E-15 130.1 34.0 370 64-524 36-449 (451)
327 PRK06918 4-aminobutyrate amino 99.5 9.9E-11 2.1E-15 127.9 36.4 359 64-525 43-444 (451)
328 PRK06062 hypothetical protein; 99.5 8.3E-11 1.8E-15 128.1 35.4 351 64-525 42-446 (451)
329 PRK13360 omega amino acid--pyr 99.5 3.8E-11 8.2E-16 130.5 32.5 364 64-524 35-440 (442)
330 PF02347 GDC-P: Glycine cleava 99.5 1.3E-11 2.7E-16 130.4 27.3 311 115-518 104-429 (429)
331 KOG2040 Glycine dehydrogenase 99.5 1.6E-11 3.5E-16 130.2 27.0 361 105-542 565-950 (1001)
332 KOG1402 Ornithine aminotransfe 99.5 2.6E-11 5.7E-16 119.8 26.6 343 64-523 48-426 (427)
333 PF12897 Aminotran_MocR: Alani 99.5 1.7E-11 3.7E-16 124.7 25.7 317 119-522 67-413 (425)
334 PRK07482 hypothetical protein; 99.5 1.1E-10 2.5E-15 127.4 33.8 367 64-525 39-455 (461)
335 PRK04013 argD acetylornithine/ 99.5 5.8E-11 1.3E-15 125.5 29.5 210 64-315 13-247 (364)
336 PRK06105 aminotransferase; Pro 99.5 1.2E-10 2.6E-15 127.2 32.1 373 64-528 37-453 (460)
337 PRK06943 adenosylmethionine--8 99.5 3.7E-10 8E-15 123.1 35.9 361 64-525 43-447 (453)
338 PRK07036 hypothetical protein; 99.5 8.8E-11 1.9E-15 128.4 31.1 369 64-527 40-455 (466)
339 PRK05965 hypothetical protein; 99.5 1.1E-10 2.4E-15 127.4 31.8 370 64-525 35-448 (459)
340 PRK05630 adenosylmethionine--8 99.4 1.4E-10 3.1E-15 125.2 32.0 352 64-524 29-420 (422)
341 PRK07986 adenosylmethionine--8 99.4 1.7E-10 3.7E-15 124.6 32.5 352 64-524 32-423 (428)
342 PF01212 Beta_elim_lyase: Beta 99.4 4.1E-13 9E-18 137.0 11.3 174 119-315 27-211 (290)
343 PRK12389 glutamate-1-semialdeh 99.4 2.4E-10 5.2E-15 124.0 33.3 201 79-315 54-285 (428)
344 PRK06916 adenosylmethionine--8 99.4 1.2E-10 2.6E-15 127.2 31.0 367 64-524 45-455 (460)
345 PRK05639 4-aminobutyrate amino 99.4 4.6E-10 9.9E-15 122.4 35.4 359 64-526 42-445 (457)
346 TIGR00508 bioA adenosylmethion 99.4 3.9E-10 8.5E-15 122.1 34.7 355 66-524 36-426 (427)
347 PRK06149 hypothetical protein; 99.4 6.4E-10 1.4E-14 131.9 39.4 346 79-526 586-972 (972)
348 TIGR00709 dat 2,4-diaminobutyr 99.4 4.8E-10 1E-14 122.1 35.5 363 64-525 28-436 (442)
349 PRK06082 4-aminobutyrate amino 99.4 4.2E-10 9E-15 122.8 34.9 352 66-525 63-452 (459)
350 PRK07030 adenosylmethionine--8 99.4 1.3E-10 2.7E-15 127.1 30.7 364 64-525 36-447 (466)
351 KOG2467 Glycine/serine hydroxy 99.4 6.8E-11 1.5E-15 118.4 25.7 353 88-525 51-427 (477)
352 PLN02482 glutamate-1-semialdeh 99.4 5.4E-10 1.2E-14 122.0 34.9 229 51-315 53-331 (474)
353 PRK07481 hypothetical protein; 99.4 7.3E-10 1.6E-14 120.8 35.6 365 64-524 31-445 (449)
354 PRK00615 glutamate-1-semialdeh 99.4 2.7E-10 5.8E-15 123.2 31.9 206 79-315 54-286 (433)
355 COG1982 LdcC Arginine/lysine/o 99.4 3.6E-11 7.9E-16 129.4 24.6 237 121-407 70-321 (557)
356 PRK08742 adenosylmethionine--8 99.4 8.6E-10 1.9E-14 120.6 35.7 361 64-524 53-467 (472)
357 COG0001 HemL Glutamate-1-semia 99.4 1.9E-10 4.1E-15 120.1 28.8 220 64-324 42-292 (432)
358 PRK00062 glutamate-1-semialdeh 99.4 1.7E-10 3.8E-15 125.1 29.9 205 79-315 51-282 (426)
359 PRK07480 putative aminotransfe 99.4 6.9E-10 1.5E-14 121.1 34.0 360 64-525 39-449 (456)
360 PRK07483 hypothetical protein; 99.4 1.1E-09 2.3E-14 119.2 34.6 372 64-525 19-438 (443)
361 COG0403 GcvP Glycine cleavage 99.4 5.7E-10 1.2E-14 114.7 29.9 317 116-522 115-448 (450)
362 PRK06938 diaminobutyrate--2-ox 99.4 2.1E-09 4.5E-14 117.5 36.2 358 64-524 52-460 (464)
363 COG0161 BioA Adenosylmethionin 99.4 2.2E-10 4.8E-15 121.0 26.8 363 64-526 33-445 (449)
364 PRK06917 hypothetical protein; 99.4 2.3E-09 5E-14 116.8 35.3 370 64-525 20-438 (447)
365 PRK07046 aminotransferase; Val 99.4 1E-09 2.2E-14 119.5 31.9 195 78-315 75-302 (453)
366 PRK06931 diaminobutyrate--2-ox 99.4 2.5E-09 5.5E-14 116.7 34.5 360 64-526 47-456 (459)
367 TIGR00699 GABAtrns_euk 4-amino 99.4 1.5E-09 3.3E-14 117.8 32.2 213 217-521 237-463 (464)
368 PRK06148 hypothetical protein; 99.3 2.3E-09 5.1E-14 127.3 34.9 344 78-526 624-1012(1013)
369 TIGR03251 LAT_fam L-lysine 6-t 99.3 1.4E-09 3E-14 118.1 29.7 360 64-521 26-431 (431)
370 COG1921 SelA Selenocysteine sy 99.3 1.6E-10 3.6E-15 119.2 19.6 195 88-316 38-240 (395)
371 KOG0258 Alanine aminotransfera 99.3 3E-09 6.6E-14 107.6 26.6 293 120-466 116-442 (475)
372 PRK08297 L-lysine aminotransfe 99.3 7.5E-09 1.6E-13 112.6 31.3 358 64-524 33-441 (443)
373 PRK06209 glutamate-1-semialdeh 99.3 8E-09 1.7E-13 112.2 30.9 212 64-315 37-268 (431)
374 COG1448 TyrB Aspartate/tyrosin 99.2 2.4E-09 5.2E-14 109.0 24.2 330 79-521 35-395 (396)
375 KOG2790 Phosphoserine aminotra 99.2 2.1E-09 4.5E-14 104.5 20.5 341 88-524 17-368 (370)
376 TIGR02617 tnaA_trp_ase tryptop 99.2 1.1E-08 2.4E-13 107.8 26.2 334 123-543 76-459 (467)
377 KOG1404 Alanine-glyoxylate ami 99.2 5E-09 1.1E-13 106.4 22.6 339 78-518 50-432 (442)
378 PRK12566 glycine dehydrogenase 99.2 8.6E-09 1.9E-13 117.9 27.2 305 115-519 118-439 (954)
379 PF06838 Met_gamma_lyase: Meth 99.2 5.6E-09 1.2E-13 105.9 22.9 167 122-316 55-242 (403)
380 PF03841 SelA: L-seryl-tRNA se 99.2 2.7E-11 5.9E-16 124.0 6.4 195 88-316 17-230 (367)
381 PLN02974 adenosylmethionine-8- 99.1 9.2E-08 2E-12 110.1 33.5 232 219-522 567-816 (817)
382 KOG1358 Serine palmitoyltransf 99.1 1.5E-08 3.2E-13 102.9 21.9 315 118-524 136-465 (467)
383 KOG1401 Acetylornithine aminot 99.1 1.2E-07 2.6E-12 97.2 28.3 290 64-400 45-354 (433)
384 PF05889 SLA_LP_auto_ag: Solub 99.0 2E-09 4.2E-14 111.4 12.1 175 121-313 56-238 (389)
385 PF00202 Aminotran_3: Aminotra 98.9 1.5E-07 3.2E-12 99.1 22.0 226 66-315 7-263 (339)
386 COG3033 TnaA Tryptophanase [Am 98.5 1.8E-05 4E-10 79.9 21.7 335 123-529 81-449 (471)
387 PF04864 Alliinase_C: Allinase 98.4 1E-05 2.2E-10 82.1 16.1 159 124-316 49-213 (363)
388 KOG2142 Molybdenum cofactor su 98.4 5.2E-07 1.1E-11 97.0 6.1 385 80-521 23-428 (728)
389 COG4100 Cystathionine beta-lya 98.3 8.3E-06 1.8E-10 80.4 13.0 168 123-316 67-253 (416)
390 KOG1412 Aspartate aminotransfe 97.7 0.0059 1.3E-07 61.1 20.4 252 183-525 127-406 (410)
391 KOG2040 Glycine dehydrogenase 97.7 0.0028 6.2E-08 68.8 18.6 294 123-519 165-478 (1001)
392 KOG1403 Predicted alanine-glyo 97.4 0.01 2.2E-07 59.1 17.5 338 87-526 60-439 (452)
393 KOG1405 4-aminobutyrate aminot 97.1 0.015 3.2E-07 59.3 15.0 214 216-524 253-483 (484)
394 KOG1411 Aspartate aminotransfe 96.7 0.02 4.3E-07 58.3 11.8 124 183-309 148-285 (427)
395 PLN02994 1-aminocyclopropane-1 94.8 0.14 2.9E-06 47.3 8.2 55 119-192 94-152 (153)
396 KOG0630 Predicted pyridoxal-de 94.6 0.48 1E-05 50.5 12.3 133 182-315 232-377 (838)
397 KOG3843 Predicted serine hydro 94.1 0.2 4.3E-06 49.3 7.8 144 177-327 100-253 (432)
398 PF05368 NmrA: NmrA-like famil 64.8 48 0.0011 32.3 9.8 75 183-268 25-99 (233)
399 PF05378 Hydant_A_N: Hydantoin 64.2 53 0.0011 31.0 9.3 45 215-263 130-176 (176)
400 PF02310 B12-binding: B12 bind 62.8 60 0.0013 27.9 9.0 80 184-273 5-91 (121)
401 PRK06450 threonine synthase; V 57.8 2.5E+02 0.0054 29.5 14.4 78 105-210 73-151 (338)
402 PRK02261 methylaspartate mutas 54.4 1E+02 0.0022 27.7 9.0 78 183-270 7-92 (137)
403 TIGR01501 MthylAspMutase methy 53.3 68 0.0015 28.8 7.6 58 197-264 24-81 (134)
404 cd02067 B12-binding B12 bindin 52.9 98 0.0021 26.6 8.6 79 183-271 3-89 (119)
405 TIGR02026 BchE magnesium-proto 52.8 77 0.0017 35.2 9.7 69 198-274 32-103 (497)
406 PRK11889 flhF flagellar biosyn 47.4 4E+02 0.0087 28.9 13.6 55 217-271 304-361 (436)
407 cd02070 corrinoid_protein_B12- 44.0 1.5E+02 0.0031 28.5 9.0 79 183-271 86-173 (201)
408 PRK10886 DnaA initiator-associ 42.5 1.5E+02 0.0032 28.6 8.6 31 234-268 111-141 (196)
409 PRK13397 3-deoxy-7-phosphohept 39.0 1.4E+02 0.003 30.0 7.9 62 215-276 132-197 (250)
410 COG1954 GlpP Glycerol-3-phosph 38.9 55 0.0012 30.5 4.7 50 217-276 12-63 (181)
411 cd02072 Glm_B12_BD B12 binding 38.6 1.1E+02 0.0024 27.2 6.5 65 197-271 22-89 (128)
412 COG1184 GCD2 Translation initi 37.5 4.8E+02 0.01 26.9 13.0 120 121-269 100-227 (301)
413 PRK13396 3-deoxy-7-phosphohept 37.1 1.4E+02 0.003 31.5 8.0 61 216-277 219-285 (352)
414 cd02071 MM_CoA_mut_B12_BD meth 37.0 2.2E+02 0.0048 24.7 8.3 78 183-270 3-88 (122)
415 PF04392 ABC_sub_bind: ABC tra 36.5 68 0.0015 32.7 5.7 117 123-267 45-164 (294)
416 PF10087 DUF2325: Uncharacteri 35.1 2.2E+02 0.0048 23.6 7.6 73 183-268 2-80 (97)
417 COG0616 SppA Periplasmic serin 34.6 1.4E+02 0.003 31.0 7.6 90 215-315 79-173 (317)
418 TIGR02370 pyl_corrinoid methyl 33.9 2E+02 0.0043 27.6 8.1 79 183-271 88-175 (197)
419 cd06448 L-Ser-dehyd Serine deh 33.9 4.3E+02 0.0092 27.3 11.2 30 181-210 76-105 (316)
420 COG0031 CysK Cysteine synthase 33.6 1.9E+02 0.0042 29.7 8.2 59 136-212 59-118 (300)
421 PLN03013 cysteine synthase 33.1 3.2E+02 0.0068 29.8 10.2 53 141-211 177-230 (429)
422 cd06447 D-Ser-dehyd D-Serine d 32.9 3.8E+02 0.0081 29.0 10.7 52 141-210 136-188 (404)
423 cd02069 methionine_synthase_B1 32.8 2E+02 0.0044 27.9 8.0 81 181-271 90-177 (213)
424 smart00642 Aamy Alpha-amylase 32.8 36 0.00078 31.7 2.6 30 242-271 62-91 (166)
425 PF00128 Alpha-amylase: Alpha 30.4 38 0.00083 34.2 2.7 36 236-271 38-73 (316)
426 cd01137 PsaA Metal binding pro 30.3 6E+02 0.013 25.8 11.5 69 190-266 183-252 (287)
427 cd01561 CBS_like CBS_like: Thi 30.2 3.9E+02 0.0084 27.1 10.1 31 181-211 78-108 (291)
428 cd01455 vWA_F11C1-5a_type Von 29.5 1.3E+02 0.0028 28.8 5.8 50 219-268 95-147 (191)
429 TIGR01138 cysM cysteine syntha 28.5 2.8E+02 0.0061 28.3 8.6 52 141-210 61-113 (290)
430 TIGR02035 D_Ser_am_lyase D-ser 28.5 4.9E+02 0.011 28.4 10.8 52 141-210 154-206 (431)
431 KOG3055 Phosphoribosylformimin 28.4 5.3E+02 0.011 24.6 9.7 66 141-226 62-129 (263)
432 PRK09545 znuA high-affinity zi 28.4 6.3E+02 0.014 26.0 11.3 70 190-267 209-279 (311)
433 COG2870 RfaE ADP-heptose synth 27.9 1.7E+02 0.0036 31.4 6.6 63 204-270 115-178 (467)
434 PRK00685 metal-dependent hydro 27.5 4.6E+02 0.0099 25.2 9.7 77 183-263 137-214 (228)
435 PRK00414 gmhA phosphoheptose i 27.5 5.4E+02 0.012 24.4 10.6 32 233-268 112-143 (192)
436 COG0296 GlgB 1,4-alpha-glucan 27.4 50 0.0011 37.6 3.0 35 238-272 202-236 (628)
437 cd02065 B12-binding_like B12 b 27.0 3.9E+02 0.0085 22.7 9.9 82 183-274 3-91 (125)
438 TIGR03590 PseG pseudaminic aci 26.9 5.6E+02 0.012 25.8 10.5 78 183-271 34-112 (279)
439 TIGR01362 KDO8P_synth 3-deoxy- 26.7 2.8E+02 0.0061 27.8 7.7 58 215-274 126-186 (258)
440 PRK12595 bifunctional 3-deoxy- 26.6 1.4E+02 0.0031 31.7 6.1 61 216-276 236-300 (360)
441 cd01018 ZntC Metal binding pro 26.5 6.6E+02 0.014 25.1 11.9 71 183-268 172-245 (266)
442 PLN02556 cysteine synthase/L-3 26.0 2.3E+02 0.005 30.1 7.6 52 141-210 113-165 (368)
443 TIGR00640 acid_CoA_mut_C methy 26.0 2E+02 0.0044 25.6 6.2 61 198-268 26-89 (132)
444 PRK02991 D-serine dehydratase; 25.5 5.8E+02 0.013 27.9 10.7 51 142-210 160-211 (441)
445 COG1105 FruK Fructose-1-phosph 24.9 5.9E+02 0.013 26.4 9.9 56 215-271 110-167 (310)
446 COG0552 FtsY Signal recognitio 24.9 3.2E+02 0.0068 28.6 8.0 149 141-315 141-310 (340)
447 PLN02565 cysteine synthase 24.2 3E+02 0.0064 28.7 7.9 52 141-210 69-121 (322)
448 COG2344 AT-rich DNA-binding pr 24.1 6.5E+02 0.014 24.2 9.6 111 123-271 68-178 (211)
449 COG2099 CobK Precorrin-6x redu 24.0 1.5E+02 0.0032 29.7 5.2 27 247-273 50-76 (257)
450 PRK04296 thymidine kinase; Pro 24.0 5.2E+02 0.011 24.3 9.1 38 232-271 77-114 (190)
451 cd07018 S49_SppA_67K_type Sign 23.4 2.7E+02 0.0059 27.1 7.2 79 215-301 28-111 (222)
452 smart00481 POLIIIAc DNA polyme 23.1 2.5E+02 0.0055 21.2 5.5 47 213-267 12-58 (67)
453 PRK05973 replicative DNA helic 22.9 5.6E+02 0.012 25.4 9.2 49 216-267 133-187 (237)
454 TIGR01139 cysK cysteine syntha 22.7 7.9E+02 0.017 24.9 10.8 53 141-211 59-112 (298)
455 cd01121 Sms Sms (bacterial rad 22.5 6.6E+02 0.014 26.7 10.3 80 183-268 113-205 (372)
456 PRK05638 threonine synthase; V 22.4 4.2E+02 0.0091 28.9 9.0 51 141-209 114-165 (442)
457 PF13460 NAD_binding_10: NADH( 22.3 5E+02 0.011 23.7 8.5 54 200-265 38-91 (183)
458 PRK07476 eutB threonine dehydr 22.1 3.7E+02 0.008 27.8 8.2 51 142-210 70-121 (322)
459 PF02492 cobW: CobW/HypB/UreG, 22.0 4E+02 0.0086 24.7 7.7 106 144-273 8-126 (178)
460 PRK08638 threonine dehydratase 21.4 3.3E+02 0.0073 28.4 7.7 51 141-209 77-128 (333)
461 cd01019 ZnuA Zinc binding prot 20.6 8.9E+02 0.019 24.5 11.4 70 190-267 185-255 (286)
462 cd00984 DnaB_C DnaB helicase C 20.6 2.5E+02 0.0054 27.4 6.3 55 214-268 104-168 (242)
463 PLN00011 cysteine synthase 20.3 7.7E+02 0.017 25.5 10.2 52 141-210 71-123 (323)
464 cd01562 Thr-dehyd Threonine de 20.2 3.4E+02 0.0073 27.6 7.4 52 141-210 67-119 (304)
465 COG2185 Sbm Methylmalonyl-CoA 20.0 4.3E+02 0.0093 24.0 6.9 76 179-264 10-92 (143)
466 PF04459 DUF512: Protein of un 20.0 3E+02 0.0065 26.6 6.4 52 214-268 145-198 (204)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-60 Score=503.11 Aligned_cols=395 Identities=31% Similarity=0.473 Sum_probs=355.2
Q ss_pred HHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 038499 56 TWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG 135 (609)
Q Consensus 56 ~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g 135 (609)
+.+|++||.....+ .++++|||++++++.|..|++++.+++..+++|.|.+.+..+...++.++++|+.+|+++|
T Consensus 6 ~~~r~~fp~l~~~~-----~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~ 80 (405)
T COG0520 6 AAVRADFPALKREV-----GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN 80 (405)
T ss_pred HHHHhhCHHHhhcc-----CCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC
Confidence 56888898665333 3468999999999999999999999999999999998888888999999999999999999
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEecC
Q 038499 136 GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLD 211 (609)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~ 211 (609)
+++.++|+|| .|||.+|+.++..++.. +++|| +|++++.|||+|..+|++ .|++++++|++
T Consensus 81 a~~~~eIvft-~~tT~aln~va~~l~~~------------~~~gd--eIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~ 145 (405)
T COG0520 81 ADSSDEIVFT-RGTTEALNLVARGLGRS------------LKPGD--EIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD 145 (405)
T ss_pred CCCCCeEEEe-CChhHHHHHHHHHhhhh------------hcCCC--EEEEccCcchhhHHHHHHHHHhcCcEEEEEecC
Confidence 9974489999 89999999999987521 47888 799999999999999975 48999999999
Q ss_pred CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccE
Q 038499 212 DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDA 291 (609)
Q Consensus 212 ~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~ 291 (609)
++|.+++++++..++ ++||+|++++++|.||.+.|+++|+++||++|++++||++|++|+.++|+..+ ++|+
T Consensus 146 ~~g~~~~~~~~~~i~-----~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df 217 (405)
T COG0520 146 DDGLLDLDALEKLIT-----PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDF 217 (405)
T ss_pred CCCCcCHHHHHHhcC-----CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCE
Confidence 999999999999888 79999999999999999999999999999999999999999999999999987 9999
Q ss_pred EEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 292 IFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 292 v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
+++|+|||++||.|+|+|++++++ ++.+.|...||+++.+++. .....+...+.+++.|||++.+.++.+.++..
T Consensus 218 ~afsgHKwl~gP~GiGvLy~r~~~--l~~l~P~~~gg~~~~~~~~---~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~ 292 (405)
T COG0520 218 LAFSGHKWLLGPTGIGVLYVRKEL--LEELEPFLGGGGMIEYVSR---DEGVTLAELPLRFEAGTPNIAGAIGLAAALDY 292 (405)
T ss_pred EEEcccccccCCCceEEEEEchHH--HhhcCCcccCCCceeeecc---cccccccCcchhhccCCchHHHHHhHHHHHHH
Confidence 999999999999999999999999 7889999999999888753 23456667789999999999999876555555
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 372 KEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 372 ~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
.+.+|++.|.++++++.+++.+.|+++|+++++++.+..+.++++|.+.. +++.++++.|.+
T Consensus 293 ~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~------------------~~~~dv~~~L~~ 354 (405)
T COG0520 293 LLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG------------------IHPHDVATLLDE 354 (405)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC------------------CCHHHHHHHHHh
Confidence 58899999999999999999999999999999998655799999999987 689999999976
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+ ||.+|.|++|+.|+ +..+++. +.+|+|+++|||+||||+++++|+++.+
T Consensus 355 ~-gI~vr~g~~ca~p~-~~~~~~~--------------------~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 355 K-GIAVRAGHHCAQPL-HRLLGVD--------------------ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred C-CeEEEeccccccHH-HHhcCCC--------------------CceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 4 89999999999887 6666654 6699999999999999999999998865
No 2
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-51 Score=419.38 Aligned_cols=378 Identities=24% Similarity=0.298 Sum_probs=326.4
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
++||||++++|..+.|.+++...+...|+||++ .|..|+...+..+++|+.||+++|+++. +|+|| ||.|++.|.++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-eIiFT-SG~TEsnNlaI 78 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-EIIFT-SGATESNNLAI 78 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-cCCcHHHHHHH
Confidence 589999999999999999999999999999999 4678999999999999999999999996 99999 67777777666
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc---CceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS---LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~---G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
...-..... -+.+. +|+++..||+++..+++.. |.+|.+++++.+|.+|+++|+++|+ ++|
T Consensus 79 ~g~~~a~~~---------~~~~~--HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-----~~T 142 (386)
T COG1104 79 KGAALAYRN---------AQKGK--HIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-----PDT 142 (386)
T ss_pred HhhHHhhhc---------ccCCC--eEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-----CCc
Confidence 542111100 01233 8999999999999988776 9999999999999999999999999 789
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
.+|++.++||.||++.|+++|+++|+++|+++|+|++|++|.+++|+..+ ++|++++|.||+.| |.|+|+||+++.
T Consensus 143 ~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK~~G-pkGiGaLyv~~~ 218 (386)
T COG1104 143 ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHKFGG-PKGIGALYVRPG 218 (386)
T ss_pred eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhhccC-CCceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999986 79999999999965 999999999887
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
. .+.|...|||+ +...++||.|+.+++..+.++.+. ...++...++...+++++.+.
T Consensus 219 ~----~~~p~i~GGgQ------------------E~g~RsGTenv~~Ivg~~~A~~~a-~~~~~~~~~~~~~lr~~l~~~ 275 (386)
T COG1104 219 V----RLEPLIHGGGQ------------------ERGLRSGTENVPGIVGFGKAAEIA-VEELEEENARLRKLRDRLEDG 275 (386)
T ss_pred C----ccCceeccCcC------------------CCCCCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 7 67899999999 888999999988877555444332 234566778889999999999
Q ss_pred hCCC-CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh---hhhh
Q 038499 395 LLPN-QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP---YGHH 470 (609)
Q Consensus 395 L~~~-p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p---~~~~ 470 (609)
|.+. |.+.+.+.. .+|+|++.....+ + +.++.+.-.| ++.||.+..|++|+.+ .+|.
T Consensus 276 l~~~~p~~~~~g~~-~~rlP~~~~~~f~-g----------------v~gE~ll~~L-~~~gI~vStGSACsS~~~~pShV 336 (386)
T COG1104 276 LLEIIPDVYLNGDD-EPRLPNILNFSFP-G----------------VEGESLLLAL-DLAGIAVSTGSACSSGSLEPSHV 336 (386)
T ss_pred HHhcCCcEEEcCCc-ccCCCCeEEEEeC-C----------------CcHHHHHHhc-cccCeEEeccccccCCCCCccHH
Confidence 9865 899888874 5799988777776 3 5677887777 6679999999999975 7889
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCc
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYN 533 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~ 533 (609)
|..|+.+...+ .+.|||||+.++|++|+++++++++++++++++..|+|.
T Consensus 337 L~AmG~~~e~a-------------~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~~~~ 386 (386)
T COG1104 337 LRAMGISEELA-------------HGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSPLWA 386 (386)
T ss_pred HHHcCCChHHh-------------CccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhccccC
Confidence 98887655443 699999999999999999999999999999999988873
No 3
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=9.5e-47 Score=406.52 Aligned_cols=395 Identities=24% Similarity=0.330 Sum_probs=319.3
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
++.+|++||..+. .+.+ .++||||+++++|.|+.|.+++.+.+...++|++.+.+..+....+.++++|+.+++++
T Consensus 5 ~~~~r~~fp~~~~---~~~~-~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 80 (406)
T PRK09295 5 VEKVRADFPVLSR---EVNG-LPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80 (406)
T ss_pred hHHHHhhCccccC---cCCC-CceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 3678999986541 1222 35799999999999999999999999877888876656667778899999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEec
Q 038499 135 GGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGL 210 (609)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~ 210 (609)
|+.+.++|+|| +|+|++++.++..+... .+++|| .|+++..+|+++..+|. ..|++++.++.
T Consensus 81 ~~~~~~~v~~t-~g~t~~l~~~~~~~~~~-----------~~~~gd--~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 81 NARSAEELVFV-RGTTEGINLVANSWGNS-----------NVRAGD--NIIISEMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred CcCCCCeEEEe-CCHHHHHHHHHHHhhhh-----------cCCCcC--EEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 98433489998 78888999888765210 147888 79999999999877764 46999999999
Q ss_pred CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCcc
Q 038499 211 DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYD 290 (609)
Q Consensus 211 ~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D 290 (609)
++++.+|+++|+++++ ++++++++++++|+||.+.|+++|+++||++|+++++|++|+.++.++++..+ ++|
T Consensus 147 ~~~~~~d~~~l~~~i~-----~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~D 218 (406)
T PRK09295 147 NPDGTLQLETLPALFD-----ERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQAL---DCD 218 (406)
T ss_pred CCCCCCCHHHHHHhcC-----CCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhc---CCC
Confidence 8888899999999997 68999999999999999999999999999999999999999999999998765 889
Q ss_pred EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 291 AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 291 ~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
++++|+||++| |.|+|++++++++ ++.++|...||+.....+. .....+.....|++.||+++.+++.+..++.
T Consensus 219 ~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~ 292 (406)
T PRK09295 219 FYVFSGHKLYG-PTGIGILYVKEAL--LQEMPPWEGGGSMIATVSL---TEGTTWAKAPWRFEAGTPNTGGIIGLGAALD 292 (406)
T ss_pred EEEeehhhccC-CCCcEEEEEchHh--HhhCCCcccCCceeeeeec---CCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence 99999999655 8899999999998 5667665555444333221 1111123345788999999988775554544
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 371 VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 371 ~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
.....|.+.+.++.+++++++.+.|+++++++++++. .+.++++|.+.. .+..++.+.|
T Consensus 293 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~--~~~~iv~~~~~~------------------~~~~~~~~~L- 351 (406)
T PRK09295 293 YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ--NRLGVIAFNLGK------------------HHAYDVGSFL- 351 (406)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC--CCceEEEEEECC------------------cCHHHHHHHH-
Confidence 4467799999999999999999999999999999873 467899998764 3567888888
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+.+||.++.|++|+.+.... .+ .++++|+|+++|||++|+|+++++|+++.+
T Consensus 352 ~~~gI~v~~g~~c~~~~~~~-~~--------------------~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 352 DNYGIAVRTGHHCAMPLMAY-YN--------------------VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HhCCeEEeccccchHHHHHH-HC--------------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 56799999999998553221 11 257999999999999999999999999865
No 4
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=1.1e-46 Score=434.42 Aligned_cols=422 Identities=20% Similarity=0.222 Sum_probs=325.4
Q ss_pred HHHHHHH-hhccCCCccccCCCCCCceEEecCCCCCCCh-HHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHH
Q 038499 53 KKLTWLQ-SQIIGKNAEFDSPFGKRRLTYADHTASGRSL-RYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYI 130 (609)
Q Consensus 53 ~~~~~~r-~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~-~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~i 130 (609)
..++.+| .+||... ..+||||+++++.+ ..|++++.+.+...++|+|+. +..+..+.+.++++|+.+
T Consensus 19 ~~~~~~R~~~fp~l~----------~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~-~~~s~~~~~~~e~aR~~i 87 (805)
T PLN02724 19 KPIDELRATEFARLK----------GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQ-SDSSMRSSDTIESARQQV 87 (805)
T ss_pred hhHHHHHHHHhhhcC----------CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcC-cchhhhHHHHHHHHHHHH
Confidence 4578899 5888664 47999999999865 567777767777788999964 556777889999999999
Q ss_pred HHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---HcCceEE
Q 038499 131 KKCLGGGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR---QSLAEVV 206 (609)
Q Consensus 131 a~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv 206 (609)
++++|+++++ +|+|| +|+|++++.++..+. +++|| +|+++..+|+++...|+ ..|++++
T Consensus 88 a~~lga~~~~~~VvFt-snaT~alnlva~~l~--------------~~~gd--~Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 88 LEYFNAPPSDYACVFT-SGATAALKLVGETFP--------------WSSES--HFCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHhCCCccceEEEEe-CChHHHHHHHHHHCC--------------CCCCC--eEEEeeccccchHHHHHHHHHcCCeEE
Confidence 9999998765 68999 789999999988764 57888 68889999988875443 2499999
Q ss_pred EEecC--------CCCCCCH--HHHHHHHhh-----hccCCCceEEEEecccCccccccCHHHHHHHHHHh--------C
Q 038499 207 EIGLD--------DDGLLDI--EALRSKLEL-----YKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--------G 263 (609)
Q Consensus 207 ~v~~~--------~~g~ld~--e~L~~al~~-----~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--------g 263 (609)
.++++ ..+.+++ ++|++.++. ....++++++++++++|.||.+.|++.|..+++.. +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 99876 3444544 667765420 00124678999999999999999999775554432 3
Q ss_pred CeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 264 GFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 264 ~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+++++|+||++|+.++|+.++ ++|++++|+|||+|||.|+|+|++++++ +..+.|...|||++.+.... .....
T Consensus 231 ~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~S~HK~~GgP~G~G~L~vr~~~--~~~l~p~~~GGg~~~~~~~~-~~~~~ 304 (805)
T PLN02724 231 WMVLLDAAKGCGTSPPDLSRY---PADFVVVSFYKIFGYPTGLGALLVRRDA--AKLLKKKYFGGGTVAASIAD-IDFVK 304 (805)
T ss_pred eEEEeehhhhcCCCCCChhhc---CCCEEEEecceeccCCCCceEEEEehhh--hhhhcCCccCCCceEEEecc-cceee
Confidence 579999999999999999987 8999999999999999999999999998 56788889998886543210 01111
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC------ceEEeCCCC-----CCCc
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ------NIKILGNTS-----TKRQ 412 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p------~i~v~~~~~-----~~r~ 412 (609)
.....+.|++.||+++.+++.++.++...+.+|++.|.+++++|.+++.+.|++++ +++++++.. ..+.
T Consensus 305 ~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~ 384 (805)
T PLN02724 305 RRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQG 384 (805)
T ss_pred ccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCccccc
Confidence 23345789999999998877555444444778999999999999999999999886 699998641 3589
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCC-
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYV- 491 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~- 491 (609)
|+++|.+.. . .+..++..++..++ +.+||++|.||+|++++...++|+... .+++.+.+|..
T Consensus 385 ~ivsFnv~~-~------------~~~~v~~~~v~~l~-~~~gI~vR~G~~Ca~~~~~~~lg~~~~---~l~~~~~~~~~c 447 (805)
T PLN02724 385 PIVTFNLKR-A------------DGSWVGHREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHK---DLQANFEAGHVC 447 (805)
T ss_pred CEEEEEEEc-C------------CCCEeCHHHHHHHH-HhcCcEEeeccccCchHHHHHcCCCHH---HHHHHhhcCCcc
Confidence 999999986 2 23346677777665 668999999999997766666776543 22333334432
Q ss_pred --------CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 492 --------GVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 492 --------~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+...|+||+||++|+|.+||++++++|++..-..
T Consensus 448 ~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 448 WDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred CchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 2234999999999999999999999999966443
No 5
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=7e-46 Score=401.96 Aligned_cols=399 Identities=25% Similarity=0.344 Sum_probs=322.0
Q ss_pred HHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 038499 56 TWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG 135 (609)
Q Consensus 56 ~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g 135 (609)
+.+|++||..+ ..+.| ++.+|||+++.++.|+.|.+++.+.+...++|++...+..+....+.++++|+.+++++|
T Consensus 15 ~~~r~~fp~~~---~~~~~-~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 90 (424)
T PLN02855 15 AETRPDFPILD---QTVNG-SKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN 90 (424)
T ss_pred HHHHHhCchhc---cccCC-CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC
Confidence 66899998654 11223 257999999999999999999999888887888765555566677888999999999999
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEecC
Q 038499 136 GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGLD 211 (609)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~ 211 (609)
+++.++|+|+ +|+|++++.++..+++. .+++|| .|+++..+|+++...|+ ..|++++.++++
T Consensus 91 ~~~~~~v~~t-~g~t~al~~i~~~~~~~-----------~~~~gd--~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~ 156 (424)
T PLN02855 91 ASTSREIVFT-RNATEAINLVAYTWGLA-----------NLKPGD--EVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT 156 (424)
T ss_pred CCCCCEEEEe-CCHHHHHHHHHHHhhhh-----------cCCCcC--EEEECCCccHHHHHHHHHHHHHcCCEEEEEecC
Confidence 9654489999 78888999988765311 146888 69999999999877764 469999999998
Q ss_pred CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccE
Q 038499 212 DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDA 291 (609)
Q Consensus 212 ~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~ 291 (609)
.++.+|+++|+++++ ++++++++++++|+||.+.|+++|+++||++|+++++|++|+.|..++++..+ ++|+
T Consensus 157 ~~~~~~~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~ 228 (424)
T PLN02855 157 PDEVLDVEQLKELLS-----EKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADF 228 (424)
T ss_pred CCCCcCHHHHHHHhc-----cCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCE
Confidence 777899999999998 68999999999999999999999999999999999999999999999988765 7899
Q ss_pred EEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 292 IFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 292 v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
+++|+||++ ||.|+|++++++++ ++.++|...||+.+.... . +...+...+.|++.||+++.+++.+..++..
T Consensus 229 ~~~s~~K~~-gp~G~G~l~~~~~~--~~~~~p~~~g~~~~~~~~--~--~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~ 301 (424)
T PLN02855 229 LVASSHKMC-GPTGIGFLWGKSDL--LESMPPFLGGGEMISDVF--L--DHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY 301 (424)
T ss_pred EEeeccccc-CCCccEEEEEchhh--hhcCCCEecCCCceeeee--c--CccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence 999999965 58899999999998 667777665555432221 0 1111222356888999998887654444443
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC---CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 372 KEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTS---TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 372 ~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~---~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
...+|.+.+.+++.++++++++.|+++++++++++.+ ..+.++++|.+.. .+..++.+.
T Consensus 302 ~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~------------------~~~~~v~~~ 363 (424)
T PLN02855 302 LSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEG------------------IHPTDLSTF 363 (424)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECC------------------cCHHHHHHH
Confidence 4677999999999999999999999999999998643 3567888888754 457789999
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
|.+++||.++.|++|+.+. +..+++ ++++|+|+++|+|++|+++++++|++++....
T Consensus 364 L~~~~gI~v~~g~~c~~~~-~~~~g~--------------------~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 364 LDQQHGVAIRSGHHCAQPL-HRYLGV--------------------NASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred hcccCCEEEechhhhhHHH-HHHhCC--------------------CCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9776799999999999543 333332 37899999999999999999999999987754
No 6
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=3.4e-45 Score=393.50 Aligned_cols=389 Identities=25% Similarity=0.312 Sum_probs=311.7
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
++.+|++||..+ ++.+|||++++++.|+.|.+++.+++...++|++.+.+..+....+.++++|+.+++++
T Consensus 3 ~~~~r~~fp~l~---------~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 73 (398)
T TIGR03392 3 PAQFRQQFPALQ---------DGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL 73 (398)
T ss_pred hhHHHHhCCccC---------CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 467899998543 25899999999999999999999988777788876655566677888999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEec
Q 038499 135 GGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIGL 210 (609)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~ 210 (609)
|+++.++|+|| +|++++++.++..+... .+++|| .|++++.+|+++..+| +..|++++.++.
T Consensus 74 g~~~~~~i~~t-~g~t~~l~~~~~~~~~~-----------~~~~gd--~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 74 NAPDAENIVWT-RGTTESINLVAQSYARP-----------RLQPGD--EIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred CCCCCCeEEEe-CChHHHHHHHHHHhhhc-----------cCCCCC--EEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 99633489999 78888999988776200 146788 7999999999976555 456999999999
Q ss_pred CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCcc
Q 038499 211 DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYD 290 (609)
Q Consensus 211 ~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D 290 (609)
+.++.+|+++|+++++ ++|+++++++++|+||.+.|+++|+++||++|+++++|++|+.++.++++..+ ++|
T Consensus 140 ~~~~~~~~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d 211 (398)
T TIGR03392 140 GADLLPDIRQLPELLT-----PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL---DID 211 (398)
T ss_pred CCCCCcCHHHHHHHhc-----cCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc---CCC
Confidence 8888899999999998 68999999999999999999999999999999999999999999888888765 789
Q ss_pred EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 291 AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 291 ~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
++++|+||++| |.|+|++++++++ ++.++|...|+......+ + ........+.+++.||+++.+++.+..++.
T Consensus 212 ~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~e~GT~~~~~~~a~~~al~ 284 (398)
T TIGR03392 212 FYAFSGHKLYG-PTGIGVLYGKTEL--LEAMPPWQGGGKMLSHVS-F---DGFIPQAVPHRFEAGTPNIAGVIGLSAALE 284 (398)
T ss_pred EEEEecccccC-CCceEEEEEcHHH--HhhCCCeecCCceEeecc-c---cccccCCChhhccCCCCCHHHHHHHHHHHH
Confidence 99999999765 8889999999998 566766543333322211 1 111122345788899999877764444443
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 371 VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 371 ~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
..+..|.+.+.++..++++++.+.|+++|+++++++. ..++++|.+.+ ++..++.+.|.
T Consensus 285 ~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~---~~~i~~~~~~~------------------~~~~~l~~~L~ 343 (398)
T TIGR03392 285 WLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCP---GSSLLAFDFAG------------------VHHSDLAALLA 343 (398)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---CCcEEEEEeCC------------------cCHHHHHHHHH
Confidence 3366799999999999999999999999999988652 45788887644 45778999886
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+ +||.++.|++|+.++.. .++ .++++|+|+++|+|++|+++++++|+.+++.
T Consensus 344 ~-~gI~v~~g~~~~~~~~~-~~g--------------------~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 344 E-SGIALRAGQHCAQPLMA-ALG--------------------VSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred h-CCEEEecCccchHHHHH-HhC--------------------CCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 5 69999999999854322 112 2489999999999999999999999998765
No 7
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.4e-44 Score=389.10 Aligned_cols=388 Identities=24% Similarity=0.288 Sum_probs=311.9
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
++.+|++||..+ ++.+|||+++.++.|+.|.+++.+.+...++|++...+..+....+.++++|+.+++++
T Consensus 6 ~~~~r~~fp~l~---------~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 76 (401)
T PRK10874 6 PAQFRAQFPALQ---------DAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL 76 (401)
T ss_pred HHHHHHhCCCcC---------CceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 477999998543 25899999999999999999999999888889887656667788899999999999999
Q ss_pred CC-CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEe
Q 038499 135 GG-GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIG 209 (609)
Q Consensus 135 g~-~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~ 209 (609)
|+ +++ +|+|+ +|++++++.++..+.. ..+++|| .|++++.+|+++..+|. ..|++++.++
T Consensus 77 g~~~~~-~i~~~-~~~t~~i~~~~~~~~~-----------~~~~~gd--~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 141 (401)
T PRK10874 77 NAPDAK-NIVWT-RGTTESINLVAQSYAR-----------PRLQPGD--EIIVSEAEHHANLVPWLMVAQQTGAKVVKLP 141 (401)
T ss_pred CCCCCC-EEEEE-CCHHHHHHHHHHHhhh-----------ccCCCcC--EEEECCcchHHHHHHHHHHHHHhCCEEEEEe
Confidence 99 454 89998 7888899999887620 0146888 79999999999876664 4699999999
Q ss_pred cCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCc
Q 038499 210 LDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 210 ~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~ 289 (609)
.+.++.+|+++++++++ ++|+++++++++|+||.+.|+++|+++||++|+++++|++|+.++.++++..+ ++
T Consensus 142 ~~~~~~~d~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~ 213 (401)
T PRK10874 142 LGADRLPDVDLLPELIT-----PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DI 213 (401)
T ss_pred cCCCCcCCHHHHHHhcC-----cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CC
Confidence 98888899999999997 68999999999999999999999999999999999999999999888888765 78
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF 369 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~ 369 (609)
|++++|+||++| |.|+|+++++++. ++.+.|...|+...... .+ .. .-......+++.||+++...+....++
T Consensus 214 d~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~e~Gt~~~~~~~al~~al 286 (401)
T PRK10874 214 DFYAFSGHKLYG-PTGIGVLYGKSEL--LEAMSPWQGGGKMLTEV-SF--DG-FTPQSAPWRFEAGTPNVAGVIGLSAAL 286 (401)
T ss_pred CEEEEecccccC-CCccEEEEEchHH--HhcCCCeecCCcceEee-cc--Cc-cCCCCChhhccCCCcCHHHHHHHHHHH
Confidence 999999999765 8889999999998 56676654333322111 11 00 111123567889999987765443333
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 370 WVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
...+..|.+.+.++.+++++++.+.|+++|+++++.+. ..++++|.+.. ++..++.+.|
T Consensus 287 ~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~---~~~i~~~~~~~------------------~~~~~~~~~L 345 (401)
T PRK10874 287 EWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQ---DSSLLAFDFAG------------------VHHSDLVTLL 345 (401)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC---CCcEEEEEECC------------------cCHHHHHHHH
Confidence 33356789999999999999999999999999988652 45778877643 4567888888
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+ .||.+++|+.|+.+.... ++ .++++|+|+++|+|++|+++++++|+++++.
T Consensus 346 ~~-~gI~v~~g~~~~~~~~~~-~g--------------------~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 346 AE-YGIALRAGQHCAQPLLAA-LG--------------------VTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HH-CCcEEeccccchHHHHHH-hC--------------------CCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 55 699999999998543221 12 1489999999999999999999999998775
No 8
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=2.2e-43 Score=380.15 Aligned_cols=395 Identities=27% Similarity=0.391 Sum_probs=315.6
Q ss_pred HHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC
Q 038499 57 WLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG 136 (609)
Q Consensus 57 ~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~ 136 (609)
.+|++|+..+ ..+.| ++++|||+++.|+.|+.|.+++.+.+...++|++.+.+..+......++++|+.+++++|+
T Consensus 2 ~~~~~f~~~~---~~~~~-~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~ 77 (403)
T TIGR01979 2 NIRADFPILK---RKING-KPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINA 77 (403)
T ss_pred chhhhCchhc---CCCCC-CceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4678887543 12333 3679999999999999999999998888888888755555666778899999999999999
Q ss_pred CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEecCC
Q 038499 137 GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGLDD 212 (609)
Q Consensus 137 ~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~ 212 (609)
++.++|+|+ +|++++++.++..+... .+++|| .|+++..+|+++...|+ ..|++++.++.++
T Consensus 78 ~~~~~v~~~-~g~t~~l~~~~~~~~~~-----------~~~~g~--~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~ 143 (403)
T TIGR01979 78 ASDEEIVFT-RGTTESINLVAYSWGDS-----------NLKAGD--EIVISEMEHHANIVPWQLLAERTGATLKFIPLDD 143 (403)
T ss_pred CCCCeEEEe-CCHHHHHHHHHHHhhhh-----------cCCCCC--EEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC
Confidence 843489998 78888999888765311 136788 79999999999876654 4699999999998
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEE
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAI 292 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v 292 (609)
++.+|+++|+++++ ++|+++++++++|+||.+.|+++|+++||+||+++++|++++.+..++++... ++|++
T Consensus 144 ~~~~~~~~l~~~i~-----~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~---~~d~~ 215 (403)
T TIGR01979 144 DGTLDLDDLEKLLT-----EKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL---DCDFY 215 (403)
T ss_pred CCCCCHHHHHHHhc-----cCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc---CCCEE
Confidence 89999999999998 68999999999999999999999999999999999999999999988888765 78999
Q ss_pred EEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 293 FLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 293 ~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
++|+||++| |.|+|++++++++ ++.+.|...||++..... .... .+.....+++.||+++..++.+..++...
T Consensus 216 ~~s~~K~~g-p~G~g~l~~~~~~--~~~~~~~~~g~~~~~~~~---~~~~-~~~~~~~~~~~gt~~~~~~~al~~al~~~ 288 (403)
T TIGR01979 216 VFSGHKMYG-PTGIGVLYGKEEL--LEQMPPFLGGGEMIAEVS---FEET-TYNEAPHKFEAGTPNIAGVIGLGAAIDYL 288 (403)
T ss_pred EEecccccC-CCCceEEEEchHH--HhcCCCeecCCCceeecc---cCcc-ccCCChhhcCCCCccHHHHHHHHHHHHHH
Confidence 999999875 8889999999988 566777766665543321 1111 12233567788999988776555444444
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC-CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 373 EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTS-TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~-~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
...|.+.+.++..++++++.+.|+.+++++++++.+ ..+.++++|.+.. .+..++.+.|.
T Consensus 289 ~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~------------------~~~~~~~~~L~- 349 (403)
T TIGR01979 289 EAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG------------------VHPHDVGTILD- 349 (403)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCC------------------cCHHHHHHHHh-
Confidence 567899999999999999999999999999998643 2467788887654 35678888885
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++||.++.|++|+.|... ..+ .++++|||+++|+|++|+++++++|+.+++.
T Consensus 350 ~~gI~v~~g~~~~~~~~~-~~~--------------------~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 350 EEGIAVRSGHHCAQPLMR-RFG--------------------VPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred hCCEEEcchhhhhHHHHH-HhC--------------------CCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 579999999999855311 111 2589999999999999999999999988765
No 9
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=2.3e-44 Score=383.45 Aligned_cols=366 Identities=30% Similarity=0.450 Sum_probs=300.8
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
||||+++.++.|+.|++++.+++...++|++.+.+..+....++++++|+.+++++|++++++|+|++ |+|.+++.++.
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~-~~t~a~~~~~~ 79 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTS-NGTEALNAVAS 79 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEES-SHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCcccccccccc-ccchhhhhhhh
Confidence 79999999999999999999999999999977767778888999999999999999999844899995 55558999988
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.+.. .+++|+ .|++...+|+++..+|.. .|++++.++.+.++.+|+++++++|+ +++
T Consensus 80 ~l~~------------~~~~g~--~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-----~~~ 140 (371)
T PF00266_consen 80 SLLN------------PLKPGD--EVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-----PDT 140 (371)
T ss_dssp HHHH------------HGTTTC--EEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-----TTE
T ss_pred cccc------------cccccc--ccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-----ccc
Confidence 7631 147788 799999999999977753 58999999998889999999999998 799
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++|.||.+.|+++|+++||++|+++++|++|++|..++|+..+ ++|++++|+|| ++||.|+|+|+++++
T Consensus 141 ~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~~ 216 (371)
T PF00266_consen 141 RLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRPE 216 (371)
T ss_dssp SEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEHH
T ss_pred ceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehhh
Confidence 99999999999999999999999999999999999999999999999987 89999999999 888999999999999
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+ +..++|...|+++..... .....+.....+++.||+++..++....++...+..|.+.+.++..++.+++.+.
T Consensus 217 ~--~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~ 290 (371)
T PF00266_consen 217 A--IERLRPAKPGGGYLDFPS----LQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREA 290 (371)
T ss_dssp H--HHHHHTSSSSSSTTTHHH----HHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h--hhcccccccccccccccc----chhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhh
Confidence 8 556777777776422110 0111123445678899999988765444444447789999999999999999999
Q ss_pred hCCCCceEEeCCC-CCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 395 LLPNQNIKILGNT-STKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 395 L~~~p~i~v~~~~-~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
|.++++++++++. ...+.++++|.+.. .+...+.+.|.++ ||.++.|+.|+.| .+..++
T Consensus 291 l~~~~~~~~~~~~~~~~~~~i~~~~~~~------------------~~~~~~~~~L~~~-~I~~~~G~~~~~~-~~~~~~ 350 (371)
T PF00266_consen 291 LEELPGIEVLGPDDEPRRPSIVSFNLPG------------------SDADDVVKYLEER-GIAVSTGSACAGP-SLDILG 350 (371)
T ss_dssp HHHTTTEEESSSSCGGBGTTEEEEEETT------------------SSHHHHHHHHHHH-TEEEEESTTTCHH-HHHHHH
T ss_pred hhcCCceeEeeecccccccceEEEeecC------------------CCHHHHHHHHhhc-CEEEeccCcccHH-HHHHhC
Confidence 9999999998853 34678899998865 5789999999876 9999999999954 333334
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFT 514 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~l 514 (609)
+ .+.||+|+++|+|++|||+|
T Consensus 351 ~--------------------~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 351 M--------------------GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp T--------------------TTEEEEE-GTTSSHHHHHHH
T ss_pred C--------------------CCEEEEeccCCCCHHHHhhC
Confidence 3 38999999999999999986
No 10
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3.3e-43 Score=373.56 Aligned_cols=353 Identities=22% Similarity=0.286 Sum_probs=287.9
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
+|||+++.++.|+.|.+++.+.+...++|++.+.+..+....+.++++|+.+++++|++++ +|+|+ +|++++++.++.
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t-~~~t~a~~~~l~ 78 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFT-SGATESNNLAIK 78 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHHH
Confidence 6999999999999999999998877788988744455667788999999999999999876 89999 566667776655
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
.+-. ..+++|+ .|+++..+|+++...|. ..|++++.++.++++.+|+++|+++|+ ++++
T Consensus 79 ~~~~-----------~~~~~g~--~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----~~t~ 140 (364)
T PLN02651 79 GVMH-----------FYKDKKK--HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-----PDTA 140 (364)
T ss_pred HHHH-----------hccCCCC--EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-----CCcE
Confidence 4310 0025677 79999999999887765 358999999998888999999999998 6899
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
++++++++|+||.+.|+++|+++||+||+++++|++|++|+.++|+..+ ++|++++|+||| +||.|+|+|+++++.
T Consensus 141 lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~~ 216 (364)
T PLN02651 141 LVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRRP 216 (364)
T ss_pred EEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999886 899999999998 679999999999988
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
+..+.|...||++ +.+++.||+++.+++ .++++++. . +.+.+.++.+++.+++.+
T Consensus 217 --~~~l~p~~~g~~~------------------~~~~~~GT~~~~~~~~l~~al~~~~--~-~~~~i~~~~~~l~~~l~~ 273 (364)
T PLN02651 217 --RVRLEPLMSGGGQ------------------ERGRRSGTENTPLVVGLGAACELAM--K-EMDYDEKHMKALRERLLN 273 (364)
T ss_pred --CCCCCccccCCCc------------------cCCccCCCccHHHHHHHHHHHHHHH--H-hHHHHHHHHHHHHHHHHH
Confidence 5677787777654 345678999987765 45666653 2 458899999999999999
Q ss_pred HhCC-CCceEEeCCCC-CCC-cceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh---
Q 038499 394 RLLP-NQNIKILGNTS-TKR-QAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY--- 467 (609)
Q Consensus 394 ~L~~-~p~i~v~~~~~-~~r-~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~--- 467 (609)
.|++ +|+++++++.+ ..+ .++++|.+.+ +++.++.+.|.+ |.++.|++|+.+.
T Consensus 274 ~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~------------------~~~~~~~~~L~~---i~v~~g~~c~~~~~~~ 332 (364)
T PLN02651 274 GLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY------------------VEGESLLMGLKE---VAVSSGSACTSASLEP 332 (364)
T ss_pred HHHhhCCCEEEECCCCcccCcCCEEEEEeCC------------------CCHHHHHHHhCC---EEEEchhhcCCCCCCc
Confidence 9985 78999999743 234 4588888754 568889998843 9999999999652
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
++.+..++..... ..+.+|+|+++|||++|||
T Consensus 333 ~~~~~~~g~~~~~-------------~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 333 SYVLRALGVPEEM-------------AHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CHHHHHcCCChHH-------------hCceEEEEcCCCCCHHHcC
Confidence 3334334321111 2589999999999999985
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=8.9e-43 Score=372.38 Aligned_cols=365 Identities=24% Similarity=0.315 Sum_probs=292.4
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
+|||+++.++.|+.|.+++.+.+...++|++.. +..+....+.++++|+.+++++|++++ +|+|+ +|++.+++.++.
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t-~~~t~a~~~al~ 77 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSM-HSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFT-SGGTESDNTAIK 77 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcc-cHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHHHH
Confidence 699999999999999999999887777888864 445667788899999999999999876 89999 566777877766
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
.+.. ..++++ +|++++.+|+++...|.. .|++++.++.+++|.+|+++++++++ ++++
T Consensus 78 ~~~~------------~~~~~~--~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-----~~~~ 138 (379)
T TIGR03402 78 SALA------------AQPEKR--HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-----DDTA 138 (379)
T ss_pred HHHH------------hcCCCC--eEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-----CCcE
Confidence 5410 013445 799999999998877654 59999999998888999999999997 6899
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
++++++++|+||.+.|+++|+++||+||+++++|++|+.|+.++|+..+ ++|++++|+|| ++||.|+|+++++++.
T Consensus 139 lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~~ 214 (379)
T TIGR03402 139 LVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKGT 214 (379)
T ss_pred EEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999875 89999999999 5569999999999876
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
.+.|...|+.. +.+.+.||+++..++. +++++. .. +.+.+.++.+++++++++
T Consensus 215 ----~~~p~~~g~~~------------------~~~~~~gt~~~~~~~~l~~al~~~--~~-~~~~~~~~~~~l~~~l~~ 269 (379)
T TIGR03402 215 ----RFRPLLRGGHQ------------------ERGRRAGTENVPGIVGLGKAAELA--TE-HLEEENTRVRALRDRLEA 269 (379)
T ss_pred ----CCCCcccCCcc------------------CCCcCCCCccHHHHHHHHHHHHHH--HH-hHHHHHHHHHHHHHHHHH
Confidence 24566555433 3345689998877664 444443 22 567888999999999999
Q ss_pred HhCC-CCceEEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh---
Q 038499 394 RLLP-NQNIKILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG--- 468 (609)
Q Consensus 394 ~L~~-~p~i~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~--- 468 (609)
.|++ ++++++.++.. .+. ++++|.+.. .++.++...|. .+||.+++|++|+.+..
T Consensus 270 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~l~-~~gI~v~~g~~c~~~~~~~~ 329 (379)
T TIGR03402 270 GLLARIPDARLNGDPT-KRLPNTVNISFEY------------------IEGEAILLLLD-MEGICASSGSACTSGSLEPS 329 (379)
T ss_pred HHHhhCCCEEEeCCCc-cCCCCEEEEEecC------------------CCHHHHHHhhc-cCCEEEEchhhcCCCCCCcC
Confidence 9985 89999988643 344 467776654 46788888884 57999999999986532
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
+.+..++.+.. ..++.||+|+++|+|++||++++++|+.+++..+.
T Consensus 330 ~~~~~lg~~~~-------------~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 330 HVLRAMGVPHT-------------AAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred HHHHHcCCChh-------------hcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 22333332111 13589999999999999999999999999887554
No 12
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=9.8e-42 Score=364.69 Aligned_cols=370 Identities=20% Similarity=0.262 Sum_probs=290.9
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
+|||++++++.++.|++++.+.+...++|++.. +..+.......+++++.+++.+|+.+.++|+|| +|++++++.++.
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t-~g~teal~~~~~ 78 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSL-HQFGTATHPAIAEALDKLYKGINARDLDDIIIT-SCATESNNWVLK 78 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccc-cHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEe-CCHHHHHHHHHH
Confidence 599999999999999999999998888999864 455666677788888999988988333489998 788889998877
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
.+.... .+++++. .|+++..+|+++...|. ..|++++.+++++++.+|+++|+++++ ++++
T Consensus 79 ~~~~~~----------~~~~~~~-~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-----~~t~ 142 (382)
T TIGR03403 79 GVYFDE----------ILKGGKN-HIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-----EKTA 142 (382)
T ss_pred HHHHhh----------cccCCCC-EEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-----cCCe
Confidence 642000 0134322 79999999999987764 469999999998889999999999998 6789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
++++++++|+||.+.|+++|.++||++|+++++|++++.|+.++++..+ ++|++++|+|||+| |.|+|++++++..
T Consensus 143 lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~g-p~G~g~l~vr~~~ 218 (382)
T TIGR03403 143 LVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKA---GVDFLSFSAHKFHG-PKGVGGLYIRKGV 218 (382)
T ss_pred EEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcccc---CCCEEEEcchhhCC-CCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999998888765 89999999999865 8889999999876
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
.+.|...|+++ ..+.+.||+++.+.+.++.++..... +.+.+.++.+.+++++.+.|
T Consensus 219 ----~~~p~~~g~~~------------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L 275 (382)
T TIGR03403 219 ----ELTPLFHGGEH------------------MGGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDAL 275 (382)
T ss_pred ----CCCCcccCCCC------------------CCCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 34565444433 22345799998887655544433232 47788899999999999999
Q ss_pred CCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh---hhhh
Q 038499 396 LPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY---GHHL 471 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~---~~~l 471 (609)
+++++++++++.+ .+.+ +++|.+.. ++...+...|. ++||.++.|++|+... .+.+
T Consensus 276 ~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~v~ 335 (382)
T TIGR03403 276 LELPDVFVVGDRE-HRVPNTILISIKG------------------VEGEAMLWDLN-KAGIAASTGSACASEDLEANPVM 335 (382)
T ss_pred hcCCCEEEECCCC-CCcCCEEEEEeCC------------------CCHHHHHHhhc-cCCEEEEchhccCCCCCCcCHHH
Confidence 9999999998643 4555 55666543 46788888885 5699999999998431 1222
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
..++.+.. ...+.||+|+++++|++|||+++++|++++++..
T Consensus 336 ~~~g~~~~-------------~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 336 VAIGADKE-------------LAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HHcCCChH-------------HhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22321110 1247899999999999999999999999987654
No 13
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-43 Score=357.30 Aligned_cols=376 Identities=23% Similarity=0.322 Sum_probs=298.7
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+|+|+++.+|.++.|.+++.+++..+|+|||.. .+++.....++++|+.+|+++|+++.| |+|| +|+|++++++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~d-IiFt-s~ATEs~Nlv 118 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSD-IVFT-SGATESNNLV 118 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCc-EEEe-CCchHHHHHH
Confidence 68999999999999999999999999999999985 467788888999999999999999994 9999 7888899999
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
+..+.+.. ..+.+.+|++...+|++...+|+. .|++|+++|++.+|.+|++.|++.|+ ++
T Consensus 119 l~~v~~~~------------~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-----~~ 181 (428)
T KOG1549|consen 119 LKGVARFF------------GDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-----SK 181 (428)
T ss_pred HHHhhccc------------cccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-----CC
Confidence 98876221 112233899999999999988864 59999999999999999999999999 79
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
|+++.+.+++|.+|++.|+++|+++|+++|+.+++|+||+.|.+++|++++ ++|++++|.|||+| |.|+|+||+++
T Consensus 182 T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~yg-p~~iGaLYvr~ 257 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIYG-PPGIGALYVRR 257 (428)
T ss_pred ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---CchheeeecccccC-CCcceEEEEcc
Confidence 999999999999999999999999999999999999999999999999998 99999999999999 54599999998
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+.-++ ...|...|||+ ++.++.||.+....+ .+++++..++..+.+.+.. ++.+.+
T Consensus 258 ~~~~~-~~~p~~~GGgq------------------~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~~~~~l 315 (428)
T KOG1549|consen 258 KRPRL-RVEPPLSGGGQ------------------ERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---RLSEKL 315 (428)
T ss_pred CCCcc-cccCcccCCcc------------------ccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---HHHHHH
Confidence 33112 34577778887 677889997665543 5666776555445554444 355566
Q ss_pred HHHhC-CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---hh
Q 038499 392 LERLL-PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---PY 467 (609)
Q Consensus 392 ~~~L~-~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p~ 467 (609)
...+. .++.+.+.|.......+.++|.+.. ++...+.. +..-+.++.|.+|.. +.
T Consensus 316 l~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~------------------~~g~~~~~---~~~~~~l~s~~a~~~~~~ep 374 (428)
T KOG1549|consen 316 LMGIGQSLPEVTLNGSGKSRYPGLVSLSFPY------------------VEGESLLM---DLKDVALSSGSACTSASLEP 374 (428)
T ss_pred HHHHhhhCchhhccCCcccccccceeeeccc------------------ccCcchhh---hhhhhhhcccchhhcCCCCc
Confidence 66553 4778888877543333444444442 12222333 445688888888864 22
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCc
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYN 533 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~ 533 (609)
...+...+.+... ...+||||++.|++++|++++.+++.+.+..+..+.|+|.
T Consensus 375 sy~l~~~G~~~~~-------------~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~ 427 (428)
T KOG1549|consen 375 SYVLRAIGVDEDL-------------AHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWE 427 (428)
T ss_pred chhhhhcCcchhh-------------hcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 3334444433222 3689999999999999999999999999999999999985
No 14
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.1e-41 Score=366.55 Aligned_cols=373 Identities=19% Similarity=0.257 Sum_probs=293.2
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
.+|||+++.+|.++.|.+++.+.+...++|++...+..+....+.++++|+.+++++|++++ +|+|+ +|+|++++.++
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~~~~l 81 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFT-SGATESNNLAI 81 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHH
Confidence 48999999999999999999888876778887543434555667899999999999999876 89998 67777888776
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
..+... ..++|+ +|+++..+|+++..+|+ ..|++++.++.++++.+|+++|+++++ +++
T Consensus 82 ~~l~~~-----------~~~~g~--~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----~~~ 143 (402)
T TIGR02006 82 KGIAHF-----------YKSKGN--HIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-----DDT 143 (402)
T ss_pred HHHHHh-----------hcCCCC--EEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-----CCC
Confidence 654200 025677 79999999999988774 359999999998889999999999997 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++|+||.+.|+++|.++||++|+++++|+++++|+.++++..+ ++|++++|+||++| |.|+|+++++++
T Consensus 144 ~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~---~~D~~~~s~~K~~g-p~G~G~l~~~~~ 219 (402)
T TIGR02006 144 ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL---KVDLMSISGHKIYG-PKGIGALYVRRK 219 (402)
T ss_pred EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc---CCCEEEEehhhhcC-CCceEEEEEccC
Confidence 99999999999999999999999999999999999999999999998865 89999999999865 988999999987
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
. ...+.|...|+++ +.+++.||+++..++..+.++...+ .+.+.+.++.+++++++.+.
T Consensus 220 ~--~~~~~~~~~g~~~------------------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~ 278 (402)
T TIGR02006 220 P--RVRLEALIHGGGH------------------ERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNG 278 (402)
T ss_pred C--CCCCCceecCCCc------------------cCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 6 4455666555543 4566789998877654433333222 36788899999999999999
Q ss_pred hCCCCceEEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh-----h
Q 038499 395 LLPNQNIKILGNTSTKRQAI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY-----G 468 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~-----~ 468 (609)
|+.+++++++++. ..+.|. +.+.+.. .+.+.+...| .+|.++.|++|++.. .
T Consensus 279 l~~~~~v~~~~~~-~~~~p~~~~v~f~~------------------~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~ 336 (402)
T TIGR02006 279 IKSIEEVYLNGDL-EHRVPGNLNVSFNY------------------VEGESLIMAL---KDLAVSSGSACTSASLEPSYV 336 (402)
T ss_pred HhcCCCEEEeCCc-cccCCCeEEEEEeC------------------cCHHHHHHhc---CCEEEechhhcCCCCCCccHH
Confidence 9999999998763 235542 2222222 2355666555 489999999998521 1
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCC
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLY 532 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y 532 (609)
...+++..+. ..+++|+|+++|+|++|+|+++++|+++++..+.+.+.|
T Consensus 337 l~~lg~~~~~---------------~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~~~~~~ 385 (402)
T TIGR02006 337 LRALGINDEL---------------AHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRELSPLW 385 (402)
T ss_pred HHHcCCChhh---------------cCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 2223332221 258999999999999999999999999998877666655
No 15
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=6.5e-40 Score=349.82 Aligned_cols=367 Identities=24% Similarity=0.328 Sum_probs=289.7
Q ss_pred EEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 79 TYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 79 vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
+|||+++++ +.|+.+.+++.+.+....++++...+..+.+......++++.+++++|+++.++|+|+ +|++++++.++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~g~t~al~~~~ 79 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFT-NNATTALNIAL 79 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEe-CCHHHHHHHHH
Confidence 699999876 6888999999888876545665443434445668899999999999999755589998 56777888877
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
..+ +++|| .|+++..+|+++..+|.. .|++++.++.+.++.+|+++|+++++ ++
T Consensus 80 ~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----~~ 137 (376)
T TIGR01977 80 KGL---------------LKEGD--HVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-----TN 137 (376)
T ss_pred Hhc---------------cCCCC--EEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-----CC
Confidence 654 47888 699999999998766543 49999999988888899999999997 68
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
++++++++++|+||.+.|+++|.++||++|+++++|+++++|..++++... ++|++++|+|||++||.|+|++++++
T Consensus 138 ~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~g~g~l~~~~ 214 (376)
T TIGR01977 138 TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTEL---AIDMLAFTGHKGLLGPQGTGGLYIRE 214 (376)
T ss_pred CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhc---CCCEEEecccccccCCCCceEEEEcC
Confidence 999999999999999999999999999999999999999999999988765 89999999999999999999999998
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+. .+.+...++... +...+ ........|++.||+++..+. .++++++ ...|.+.+.++.+++++++
T Consensus 215 ~~----~~~~~~~~~~~~-~~~~~-----~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~l~~~~ 282 (376)
T TIGR01977 215 GI----KLKPLKSGGTGS-HSALI-----DQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGIANIAKKECMLTEKL 282 (376)
T ss_pred Cc----CcCceecCCCcc-ccccc-----cccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHH
Confidence 76 234444443221 11000 011223457788998876654 3445544 5679999999999999999
Q ss_pred HHHhCCCCceEEeCCCC-CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 392 LERLLPNQNIKILGNTS-TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~-~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
.+.|.++++++++++.+ ..+.++++|.+.. .+..++.+.|.+.+||.++.|..|+.. .+.
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~------------------~~~~~~~~~L~~~~gi~v~~g~~~~~~-~~~ 343 (376)
T TIGR01977 283 LNGLREINKVKIYGPADPANRVGVVSFTVEG------------------IDSEEVADILDEKFDIATRTGLHCAPL-AHK 343 (376)
T ss_pred HHHHhcCCCeEEeCCCCccccCCeEEEEECC------------------CCHHHHHHHHhccCCEEEEcccccchH-HHH
Confidence 99999999999997632 3467888888754 467889999977679999999988832 221
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
..+ ..+++.+|++++.++|++|+++++++|+.
T Consensus 344 ~~g------------------~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 TIG------------------TFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HhC------------------CCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 111 11358999999999999999999999975
No 16
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.1e-39 Score=351.32 Aligned_cols=373 Identities=20% Similarity=0.265 Sum_probs=289.0
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhc--CCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVL--PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~--~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.+|||+++.+|.|+.|.+++.+++. ..++|++...+..+......++++|+.+++++|++++ +|+|+ +|+|++++.
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~-~g~t~al~~ 81 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFT-SGATESDNL 81 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEe-CCHHHHHHH
Confidence 5899999999999999999988886 5678887643334445567889999999999999876 79998 677778888
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
++.++... .+++|| +|++++.+|+++..+|+. .|++++.++.++++.+|+++|+++|+ +
T Consensus 82 ~l~~l~~~-----------~~~~gd--~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-----~ 143 (404)
T PRK14012 82 AIKGAAHF-----------YQKKGK--HIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-----D 143 (404)
T ss_pred HHHHHHHh-----------hcCCCC--EEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-----C
Confidence 76654200 025777 799999999999877754 49999999998889999999999998 6
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
+++++++++++|+||.+.|+++|.++||++|+++++|+++++|..++++..+ ++|++++|+||++| |.|+|+++++
T Consensus 144 ~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~g-p~g~G~l~~~ 219 (404)
T PRK14012 144 DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL---KVDLMSFSAHKIYG-PKGIGALYVR 219 (404)
T ss_pred CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC---CCCEEEEehhhccC-CCceEEEEEe
Confidence 8999999999999999999999999999999999999999999998888765 78999999999765 8889999999
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
++. ...+.|...|++. ..+++.||+++...+....++...+ .+.+.+.++.+++++++.
T Consensus 220 ~~~--~~~~~~~~~g~~~------------------~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~ 278 (404)
T PRK14012 220 RKP--RVRLEAQMHGGGH------------------ERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLW 278 (404)
T ss_pred cCC--CCCCCceecCCCc------------------cCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHH
Confidence 886 3455565555543 3446678887766553332322222 356678899999999999
Q ss_pred HHhCCCCceEEeCCCCCCCcc---eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh--
Q 038499 393 ERLLPNQNIKILGNTSTKRQA---ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY-- 467 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~---~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~-- 467 (609)
+.|++++++.++++.. .+.+ +++|...+ ...+...| .++.++.|+.|.+.+
T Consensus 279 ~~L~~~~~i~~~~~~~-~~~~~~~~~~~~~~~--------------------~~~~~~~l---~~~~i~~g~~~~~~~~~ 334 (404)
T PRK14012 279 NGIKDIEEVYLNGDLE-QRVPGNLNVSFNYVE--------------------GESLIMAL---KDLAVSSGSACTSASLE 334 (404)
T ss_pred HHHhcCCCEEEeCCcc-ccCCCEEEEEEeCcC--------------------HHHHHHhC---CCeEEEchhhhCCCCCC
Confidence 9999999998876421 2333 34444322 34566665 388899999997531
Q ss_pred ---hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCcc
Q 038499 468 ---GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYNF 534 (609)
Q Consensus 468 ---~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~~ 534 (609)
....+++.+ .+.++.||+|+++++|++|+++++++|+++++..+.+.++|..
T Consensus 335 ~~~~~~~~~~~~---------------~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~~~~~~~ 389 (404)
T PRK14012 335 PSYVLRALGLND---------------ELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRELSPLWEM 389 (404)
T ss_pred CCHHHHHcCCCh---------------hhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhccchhh
Confidence 111122211 1236899999999999999999999999999988877777754
No 17
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=2.5e-39 Score=345.95 Aligned_cols=368 Identities=20% Similarity=0.230 Sum_probs=284.6
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
++|||++++++.|+.|.+++.+++...++|++.. +..+......++++|+.+++++|++++ +|+|+ +|+++++..++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~-~g~t~a~~~~~ 77 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNESSL-HDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFT-SGGTESNYLAI 77 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCccc-cHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHHH
Confidence 3899999999999999999999888888888754 556777788999999999999999876 89998 67787777766
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
..+.-. ..++|+ +|++++.+|+++...| +..|++++.+++++++.+|+++|+++++ +++
T Consensus 78 ~~~~~~-----------~~~~g~--~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----~~~ 139 (381)
T PRK02948 78 QSLLNA-----------LPQNKK--HIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-----PDT 139 (381)
T ss_pred HHHHHh-----------ccCCCC--EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-----CCC
Confidence 554100 014566 7999999999987765 4469999999998888999999999997 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++|+||.+.|+++|.++|+++|+++++|++++++..++++.+. ++|++++|+||++| |.|+|+++++++
T Consensus 140 ~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~~g-p~G~G~l~~~~~ 215 (381)
T PRK02948 140 VLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKIYG-PKGVGAVYINPQ 215 (381)
T ss_pred EEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhcCC-CCcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999888888775 78999999999876 888999999887
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
. .+.+...++.. +.+++.||+++.+.+.+..++.... .+.+.+.++.+++++++.+.
T Consensus 216 ~----~~~~~~~~~~~------------------~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~ 272 (381)
T PRK02948 216 V----RWKPVFPGTTH------------------EKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQ 272 (381)
T ss_pred C----CCCCcccCCCC------------------CCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 6 12222222211 3456678888877665444433211 25778889999999999999
Q ss_pred hCCCCceEEeCCC-CCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh---hhh
Q 038499 395 LLPNQNIKILGNT-STKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP---YGH 469 (609)
Q Consensus 395 L~~~p~i~v~~~~-~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p---~~~ 469 (609)
|+++ ++++.... ...+.+ +++|.+.. ++..++...| +.+||.++.|++|+.+ .++
T Consensus 273 L~~~-~~~v~~~~~~~~~~~~i~~~~~~~------------------~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~ 332 (381)
T PRK02948 273 IQTL-PLPIEVEGHSTSCLPHIIGVTIKG------------------IEGQYTMLEC-NRRGIAISTGSACQVGKQEPSK 332 (381)
T ss_pred HhcC-CCCEEEeCCCccCcCCEEEEEeCC------------------CCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCH
Confidence 9987 44433221 123444 56666554 4567788777 4579999999999854 234
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+..++.+... ..+++|||+++|+|++|+++++++|+.+.+...
T Consensus 333 ~~~~~~~~~~~-------------~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 333 TMLAIGKTYEE-------------AKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred HHHHcCCChHH-------------hCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 34333321110 248999999999999999999999999877644
No 18
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=1.1e-38 Score=342.89 Aligned_cols=373 Identities=25% Similarity=0.294 Sum_probs=290.7
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
++.+|++|+..+ ....+|||+++.++.|+.+.+++.+.+.....+++.. +.......+.++++++.+++++
T Consensus 3 ~~~~r~~f~~~~--------~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ia~~~ 73 (397)
T TIGR01976 3 VEAVRGQFPALA--------DGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRGGA-YESSRRADQVVDDAREAVADLL 73 (397)
T ss_pred hhHHHhhCCcCC--------CCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCC-chHHHHHHHHHHHHHHHHHHHc
Confidence 467889998643 0126999999999999999999998886655555432 3334456678899999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEec
Q 038499 135 GGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIGL 210 (609)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~ 210 (609)
|++++ +|+++ +|++.+++.+..++.. .+++|| .|++++.+|+++...| +..|++++.++.
T Consensus 74 ~~~~~-~v~~~-~~~t~~l~~~~~~~~~------------~~~~gd--~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~ 137 (397)
T TIGR01976 74 NADPP-EVVFG-ANATSLTFLLSRAISR------------RWGPGD--EVIVTRLDHEANISPWLQAAERAGAKVKWARV 137 (397)
T ss_pred CCCCC-eEEEe-CCHHHHHHHHHHHHHh------------cCCCCC--EEEEcCCchHhHHHHHHHHHHhcCCEEEEEec
Confidence 99876 78888 6777788877766521 146888 7999999999987666 447999999998
Q ss_pred CC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCc
Q 038499 211 DD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 211 ~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~ 289 (609)
++ ++.+|+++|+++++ ++++++++++++|+||.+.|+++|+++||+||+++++|++|+.+..++++..+ ++
T Consensus 138 ~~~~~~~~~~~l~~~i~-----~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~ 209 (397)
T TIGR01976 138 DEATGELHPDDLASLLS-----PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQAT---GA 209 (397)
T ss_pred cccCCCcCHHHHHHhcC-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHc---CC
Confidence 76 68899999999997 68999999999999999999999999999999999999999988888887765 78
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHH
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAAL 367 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal 367 (609)
|++++|+|||+| |. +|++++++++ ++.+.+....+ .+.....+++.||+++..++ .+++
T Consensus 210 d~~~~s~~K~~g-~~-~G~l~~~~~~--~~~l~~~~~~~---------------~~~~~~~~~~~gt~~~~~~~~l~~al 270 (397)
T TIGR01976 210 DFLTCSAYKFFG-PH-MGILWGRPEL--LMNLPPYKLTF---------------SYDTGPERFELGTPQYELLAGVVAAV 270 (397)
T ss_pred CEEEEechhhcC-Cc-eEEEEEcHHH--HhhCCCccccC---------------ccCCCcchhcCCCCCHHHHHHHHHHH
Confidence 999999999986 65 7999999988 45555442211 11223567889999876654 4555
Q ss_pred HHHHHHhcC--------------HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC-CCCcceEEEEeccCCCCCcCCCCC
Q 038499 368 AFWVKEYIG--------------HEVIKKQEETYIERALERLLPNQNIKILGNTS-TKRQAILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 368 ~~~~~~~~g--------------~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~-~~r~~~~~f~~~~~~~~~~~~~~~ 432 (609)
+++ ...| .+.+.++..++++++++.|+++++++++++.+ ..+.+++.|.+..
T Consensus 271 ~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 337 (397)
T TIGR01976 271 DYL--AGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG----------- 337 (397)
T ss_pred HHH--HHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC-----------
Confidence 555 3333 67788899999999999999998899987632 3467888776654
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
.+..++.+.|.+ .||.++.|++|..+. +..+++.. +.+++|||+++|+|++|++
T Consensus 338 -------~~~~~l~~~L~~-~gI~v~~~~~~~~~~-~~~~~~~~-----------------~~~~iRis~~~~~t~~di~ 391 (397)
T TIGR01976 338 -------LPPQRVVRRLAD-QGIDAWAGHFYAVRL-LRRLGLND-----------------EGGVVRVGLAHYNTAEEVD 391 (397)
T ss_pred -------cCHHHHHHHHHH-CCeEEEeCccchHHH-HHHhCCCC-----------------CCCeEEEEeeccCCHHHHH
Confidence 356789998855 699999999987432 22223210 2478999999999999999
Q ss_pred HHHHHH
Q 038499 513 FTLEAL 518 (609)
Q Consensus 513 ~ll~al 518 (609)
+++++|
T Consensus 392 ~l~~~l 397 (397)
T TIGR01976 392 RLLEAL 397 (397)
T ss_pred HHHHhC
Confidence 999875
No 19
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=5.7e-38 Score=334.49 Aligned_cols=367 Identities=31% Similarity=0.474 Sum_probs=291.0
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
+|||+++.++.|+.+++++.+.+...+.|++.+.+..+....+...++++.+++++|++..++|+++ +|++.+++.++.
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~g~t~a~~~~~~ 79 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFT-RNTTEAINLVAY 79 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEe-CCHHHHHHHHHH
Confidence 5999999999999999999999988888988765566777888999999999999999833489998 677778888887
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
++... ..+|+ .|++++.+|++...++ +..|++++.|+.+.++.+|+++|++++. +++
T Consensus 80 ~l~~~------------~~~g~--~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-----~~~ 140 (373)
T cd06453 80 GLGRA------------NKPGD--EIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLT-----ERT 140 (373)
T ss_pred Hhhhc------------CCCCC--EEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhc-----CCc
Confidence 76300 01677 6999999999975443 3579999999998888999999999998 579
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++|+||.+.|+++|.++|++||+++++|++++.+..++++.+. ++|++++|+||++++ .|+|+++++++
T Consensus 141 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~-~g~g~~~~~~~ 216 (373)
T cd06453 141 KLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL---GCDFLAFSGHKMLGP-TGIGVLYGKEE 216 (373)
T ss_pred eEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc---CCCEEEeccccccCC-CCcEEEEEchH
Confidence 99999999999999999999999999999999999999998888887765 789999999999997 66899999998
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
+ ++.+.+...|+...... ......| .....+++.||+++..++. +++.++ ...|.+.+.++.+++++++.
T Consensus 217 ~--~~~~~~~~~g~~~~~~~---~~~~~~~-~~~~~~~~~~t~~~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~l~ 288 (373)
T cd06453 217 L--LEEMPPYGGGGEMIEEV---SFEETTY-ADLPHKFEAGTPNIAGAIGLGAAIDYL--EKIGMEAIAAHEHELTAYAL 288 (373)
T ss_pred H--hhcCCCeecCCCccccc---ccccccc-CCCccccCCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHH
Confidence 8 56777665555442211 1111122 2234566778988776553 344433 55688999999999999999
Q ss_pred HHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 393 ERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
+.|.++++++++.+. ..+.++++|.+.. .+..++.+.|.+ .||.+++|+.|..+...
T Consensus 289 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~--- 345 (373)
T cd06453 289 ERLSEIPGVRVYGDA-EDRAGVVSFNLEG------------------IHPHDVATILDQ-YGIAVRAGHHCAQPLMR--- 345 (373)
T ss_pred HHHhcCCCeEEeCCc-cccCCeEEEEECC------------------cCHHHHHHHHHH-CCEEeccCccchhHHHH---
Confidence 999999999998542 2356777777643 356788888865 69999999988854222
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
.++ .+++||+|+++++|++|+|+++++|
T Consensus 346 ~~~------------------~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 346 RLG------------------VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HhC------------------CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 111 2589999999999999999999875
No 20
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=5.8e-38 Score=338.08 Aligned_cols=383 Identities=16% Similarity=0.154 Sum_probs=277.2
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhh-HHHHHHHHHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVG-QHTTNMVHEASNYI 130 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~-~~~~~~~~e~r~~i 130 (609)
++.++.+|++|+... .. +.+..+|||+++.|+.|+.|.+++.+++..+ +++....+..+ .......++.++ +
T Consensus 7 ~~~~~~~r~~f~~~~---~~--~~~~~iyld~~a~g~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (406)
T TIGR01814 7 ADPLRALRDEFHLPK---IG--DENAVIYLDGNSLGLMPKAARNALKEELDKW-AKIAIRGHNTGKAPWFTLDESLLK-L 79 (406)
T ss_pred cChHHHHHHhcCCCc---cc--CCCCcEEecCCCcCcCcHHHHHHHHHHHHHH-HHhhhccCccCCCChhhhhhhhcc-c
Confidence 456788999998542 00 1136899999989999999999998776543 33322111111 122233333333 5
Q ss_pred HHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC-ceEEEECCCCccchHHHHH----HcCceE
Q 038499 131 KKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE-RWVVFVGPHEHHSNLLSWR----QSLAEV 205 (609)
Q Consensus 131 a~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~----~~G~~v 205 (609)
+++|++++ +|+|+ +|+|++++.++..+ +++++ +.+|+++..+|+++..+|. ..|+++
T Consensus 80 -~l~g~~~~-~v~~~-~~~t~~l~~~~~~~---------------~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~ 141 (406)
T TIGR01814 80 -RLVGAKED-EVVVM-NTLTINLHLLLASF---------------YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTV 141 (406)
T ss_pred -cccCCCCC-cEEEe-CCchHHHHHHHHHh---------------cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCc
Confidence 89999876 89999 67788899887765 23432 2278899999999877664 458887
Q ss_pred ----EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccC
Q 038499 206 ----VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV 281 (609)
Q Consensus 206 ----v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~ 281 (609)
+.++.+.+|.+|++++++.++.. .++|++|++++++|.||.+.|+++|+++||++|+++++|++|++|+.++|+
T Consensus 142 ~~~~~~~~~~~~g~~~~~~l~~~~~~~--~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~ 219 (406)
T TIGR01814 142 EESMVQIEPREEETLRLEDILDTIEKN--GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL 219 (406)
T ss_pred ccceEEeccCCCCccCHHHHHHHHHhc--CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc
Confidence 56666667888999999988531 158999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH
Q 038499 282 RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ 361 (609)
Q Consensus 282 ~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~ 361 (609)
..+ ++|++++|+|||++||.| |+++++++. +..+.|...|+........+.. ...+...+.+++.|||++..
T Consensus 220 ~~~---gvD~~~~s~hK~l~g~pG-~~l~v~~~~--~~~~~p~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~GT~~~~~ 291 (406)
T TIGR01814 220 HDW---GVDFACWCTYKYLNAGPG-AGAFVHEKH--AHTERPRLAGWWGHARPTRFKM--DNTLGLIPCGFRISNPPILS 291 (406)
T ss_pred ccC---CCCEEEEcCccccCCCCC-eEEEEehhh--hhhcCCCCCcccCCCCcccccc--ccccCCCccceeeCCccHHH
Confidence 876 899999999999976667 777776665 3345566555422111110110 01111224577889999888
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCC-CCCcceEEEEeccCCCCCcCCCCCCCCC
Q 038499 362 MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTS-TKRQAILSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~-~~r~~~~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
+..+..++......|.+.+.++.+++.+++++.|.++ ++++++++.+ ..+.++++|.+..
T Consensus 292 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~--------------- 356 (406)
T TIGR01814 292 VAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPV--------------- 356 (406)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecC---------------
Confidence 6644434333367799999999999999999999775 4699998743 2466788877642
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTL 515 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll 515 (609)
+..++.+.|.+ .||.+... .++.||+|+ ++|||++|+++++
T Consensus 357 ----~~~~~~~~L~~-~gi~v~~~---------------------------------~~~~iRiS~~~~~nt~~did~l~ 398 (406)
T TIGR01814 357 ----PGKAVFQALIK-RGVIGDKR---------------------------------EPSVIRVAPVPLYNTFVDVYDAV 398 (406)
T ss_pred ----CHHHHHHHHHH-CCEEEecc---------------------------------CCCeEEEechhccCCHHHHHHHH
Confidence 35788888855 59976410 147899999 7999999999999
Q ss_pred HHHHHHH
Q 038499 516 EALEFIA 522 (609)
Q Consensus 516 ~al~~v~ 522 (609)
++|++++
T Consensus 399 ~~l~~~~ 405 (406)
T TIGR01814 399 NVLEEIL 405 (406)
T ss_pred HHHHHHh
Confidence 9998864
No 21
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=8.6e-37 Score=323.07 Aligned_cols=345 Identities=22% Similarity=0.287 Sum_probs=270.1
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
|||+++.++.|+.|.+++.+++...++|++...+..+....+.++++|+.+++++|++++ +|+|+ +|++++++.++..
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~~~~l~~ 78 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFT-SGATESNNLAILG 78 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHHHH
Confidence 899999999999999999998876678887643444556678899999999999999876 89998 6778788877765
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+... ..++|+. +|+++..+|+++..+|+ ..|++++.++.++++.+|+++|+++++ +++++
T Consensus 79 l~~~-----------~~~~g~~-~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-----~~~~l 141 (353)
T TIGR03235 79 LARA-----------GEQKGKK-HIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-----PDTLL 141 (353)
T ss_pred HHHh-----------cccCCCC-eeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-----CCCEE
Confidence 5200 0124422 79999999999987764 369999999998888999999999997 57999
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY 316 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~ 316 (609)
+++++++|+||.+.|+++|+++||++|+++++|++|+.|..++++..+ ++|++++|+|||+ ||.|+|+++++++..
T Consensus 142 v~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~g~l~~~~~~~ 217 (353)
T TIGR03235 142 VSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKIY-GPKGIGALVIRKRGK 217 (353)
T ss_pred EEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhcC-CCCceEEEEEccCcc
Confidence 999999999999999999999999999999999999999999998865 8999999999996 598999999999862
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
....+.|...+++. ..+++.||+++..++ .+++++. . .+.+.+.++.+++++++++.
T Consensus 218 ~~~~~~~~~~~~~~------------------~~~~~~gt~~~~~~~al~~al~~~--~-~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 218 PKAPLKPIMFGGGQ------------------ERGLRPGTLPVHLIVGMGEAAEIA--R-RNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred cccccCceeeCCCC------------------cCccccCCCChHHHHHHHHHHHHH--H-hhHHHHHHHHHHHHHHHHHH
Confidence 11224454444432 356778898776654 4455543 2 47889999999999999999
Q ss_pred hCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh---hhhhh
Q 038499 395 LLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP---YGHHL 471 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p---~~~~l 471 (609)
|++ +|++++++......++++|.+.. .+..++.+.|. . +|.+++|..|+.. ..+.+
T Consensus 277 l~~-~g~~~~~~~~~~~~~i~~~~~~~------------------~~~~~v~~~L~-~-~i~v~~g~~~~~~~~~~~~~l 335 (353)
T TIGR03235 277 LQT-LGVKLNGDPAETIPHILNFSIDG------------------VNSEALIVNLR-A-DAAVSTGSACSSSKYEPSHVL 335 (353)
T ss_pred hcc-CCeEEeCCcccccCCEEEEEeCC------------------cCHHHHHHHHh-C-CeEEEchhhcCCCCCCCCHHH
Confidence 988 79999876433345577776543 46788999994 3 8999999999743 12445
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
..++.+..+. .+.+|+|+
T Consensus 336 ~~~g~~~~~~-------------~~~~r~s~ 353 (353)
T TIGR03235 336 QAMGLDTDRA-------------RGAIRFSW 353 (353)
T ss_pred HHcCCCHHHh-------------CccEEEeC
Confidence 5555433221 48899986
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=3.6e-33 Score=299.93 Aligned_cols=357 Identities=14% Similarity=0.034 Sum_probs=264.4
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
|+...+-...++.|.+++.+.+. .| .+....++++++++.+++++|++.++.+++++ ++++++..++..
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~-----~~-----~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~-~gt~a~~~a~~~ 79 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNE-----DH-----RSPAFPALTKELLEDVKYIFKTKSGTPFIFPT-TGTGAWESALTN 79 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCC-----CC-----CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeC-CcHHHHHHHHHh
Confidence 55555555566777777644321 12 24466788999999999999998655778885 446677766654
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+ +++|| .|++..+.|++.. ..++..|++++.++.+.++.+|+++|+++++.+. .++++++
T Consensus 80 ~---------------~~~Gd--~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~-~~~~k~v 141 (401)
T PLN02409 80 T---------------LSPGD--KVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDT-NHKIKAV 141 (401)
T ss_pred c---------------CCCCC--EEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCc-CCCccEE
Confidence 3 57899 5888888898764 3345679999999988766689999999998410 0278999
Q ss_pred EEecccCccccccCHHHHHHH--HHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 238 SFSACSNVTGIYSDTRSIARL--LHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~l--a~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
++++++|+||.+.|+++|+++ ||++|+++++|++++.+..++++..+ ++|++++|+|||++||.|+|++++++++
T Consensus 142 ~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~~~ 218 (401)
T PLN02409 142 CVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASPKA 218 (401)
T ss_pred EEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECHHH
Confidence 999999999999999999999 99999999999999999999998876 8999999999999999999999999988
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccc-cccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE-RESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~-r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
++.+.+...... +.+ |. .+....+. ....+||++..+. .++++++ ...|.+.+.++.++++++++
T Consensus 219 --~~~~~~~~~~~~---~~~-~~----~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~ 286 (401)
T PLN02409 219 --LEASKTAKSPRV---FFD-WA----DYLKFYKLGTYWPYTPSIQLLYGLRAALDLI--FEEGLENVIARHARLGEATR 286 (401)
T ss_pred --HHHHhcCCCCCe---ecC-HH----HHHHHHhcCCCCCCCccHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHH
Confidence 344433211100 000 00 00000011 1224688775544 5556655 56799999999999999999
Q ss_pred HHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 393 ERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
+.|+++ |++++++....+.+.+++...+.+ ++..++.+.|.+++||.+.+|....
T Consensus 287 ~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~----------------~~~~~l~~~l~~~~~i~i~~G~~~~-------- 341 (401)
T PLN02409 287 LAVEAW-GLKLCTKKPEWRSDTVTAVVVPEG----------------IDSAEIVKNAWKKYNLSLGLGLNKV-------- 341 (401)
T ss_pred HHHHHc-CCeeccCChhhcccceEEEeCCCC----------------CCHHHHHHHHHHhCCEEEEcCCCcc--------
Confidence 999887 899987643456655554433302 4677888888888999999774321
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+.+.+||+...|++.+|+..++++|+.++....
T Consensus 342 ---------------------~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 342 ---------------------AGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred ---------------------cCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 357899999989999999999999999887643
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=9.3e-33 Score=292.53 Aligned_cols=342 Identities=18% Similarity=0.129 Sum_probs=253.7
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.+.|+.|.+++.+.+. +..+....+..+++++.+++++|+++++.++++++| +++++.++..+
T Consensus 8 ~~~~~~v~~a~~~~~~----------~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~-t~al~~~~~~~------ 70 (356)
T cd06451 8 SNVPPRVLKAMNRPML----------GHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSG-TGAMEAALSNL------ 70 (356)
T ss_pred cCCCHHHHHHhCCCcc----------CCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCc-HHHHHHHHHHh------
Confidence 4567778787754321 112334567789999999999999655467888544 55788777765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+++|+ .|++....|++. ...++..|++++.++.++++.+|++++++++++ .+++++++++++|
T Consensus 71 ---------~~~g~--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~----~~~~~v~i~~~~~ 135 (356)
T cd06451 71 ---------LEPGD--KVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQ----HDIKAVTLTHNET 135 (356)
T ss_pred ---------CCCCC--EEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc----cCCCEEEEeccCC
Confidence 36788 688877788774 345677899999999988788999999999983 3789999999999
Q ss_pred ccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC-
Q 038499 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP- 323 (609)
Q Consensus 245 ~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p- 323 (609)
+||.+.|+++|.++||++|+++++|++|+.|..++++... ++|+++.|+|||+++|.|+|++++++++ ++.+.+
T Consensus 136 ~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~~~--~~~~~~~ 210 (356)
T cd06451 136 STGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSERA--LERIKKK 210 (356)
T ss_pred CcccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECHHH--HHHHHhc
Confidence 9999999999999999999999999999988877777654 7899999999999999999999999887 333321
Q ss_pred -CccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 324 -STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 324 -~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
...++ +.. .. ....+.. ..+...+|+++.+.. .+++.++ ...+.+.+.++.+++++++.+.|.++ +
T Consensus 211 ~~~~~~----~~~-~~-~~~~~~~--~~~~~~~t~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~-g 279 (356)
T cd06451 211 TKPKGF----YFD-LL-LLLKYWG--EGYSYPHTPPVNLLYALREALDLI--LEEGLENRWARHRRLAKALREGLEAL-G 279 (356)
T ss_pred CCCCce----eec-HH-HHHhhhc--ccCCCCCCChHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 11111 000 00 0000110 122556777776543 4555554 34578889999999999999999887 8
Q ss_pred eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHH
Q 038499 401 IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY 480 (609)
Q Consensus 401 i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~ 480 (609)
+++.++. ..+.+++.+...+ .. .+...+++.|.+++||.+++|..|.
T Consensus 280 ~~~~~~~-~~~~~~~~~~~~~-~~---------------~~~~~~~~~L~~~~gI~~~~g~~~~---------------- 326 (356)
T cd06451 280 LKLLAKP-ELRSPTVTAVLVP-EG---------------VDGDEVVRRLMKRYNIEIAGGLGPT---------------- 326 (356)
T ss_pred CeeccCc-ccCCCceEEEECC-CC---------------CCHHHHHHHHHHhCCEEEecccccc----------------
Confidence 8887653 2345666555444 11 4678899999776699999776432
Q ss_pred HHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 481 QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 481 ~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.++++|+|++.++|++|+++++++|+.++
T Consensus 327 -------------~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 327 -------------AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred -------------cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 24799999999999999999999999875
No 24
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=2.8e-32 Score=290.59 Aligned_cols=355 Identities=12% Similarity=0.050 Sum_probs=258.8
Q ss_pred CceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 76 RRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 76 ~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+..+||+.+.+.+.+..|.+++.+.+. ++.|. +..+.+.++++|+.+++++|+++.++|+|+.+++|.+++.
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr-----~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~ 82 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALL---GRSHR-----QKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEM 82 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhc---ccCcC-----CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHH
Confidence 347799999988888879999876543 33343 3467889999999999999986544788875466778998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-H-HHcCc-eEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-W-RQSLA-EVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~-~~~G~-~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
++..+ +++++ ..|++ ..+|++.... + +..|+ +++.++.++++.+|+++ ++
T Consensus 83 ~~~~l---------------~~~~~-~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~----i~------ 135 (378)
T PRK03080 83 ALWSL---------------LGARR-VDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSA----VD------ 135 (378)
T ss_pred HHHhc---------------CCCCc-ceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhh----cC------
Confidence 88765 34323 14444 5788887665 3 45788 99999888777788776 33
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
.+++|+++|++|.||.+.|+++|++ |+||+++++|++|++|+.++|+.. +|++++|+|||++||.|+|+++++
T Consensus 136 ~~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-----iD~~~~s~~K~l~~P~G~g~l~v~ 208 (378)
T PRK03080 136 FDRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-----LDVYTFSWQKVLGGEGGHGMAILS 208 (378)
T ss_pred CCCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-----CcEEEEehhhhCCCCCceEEEEEC
Confidence 2567899999999999999999999 889999999999999999999974 599999999999999999999999
Q ss_pred chhhccCCCCCCccCCCceEeeccccccccccccccccccc---CCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES---GGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEET 386 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~---~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~ 386 (609)
++. ++.+.|...|+....+.+ ........+.+++ .+||++..+. .+++++. ... |.+.+.+|+++
T Consensus 209 ~~~--~~~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gG~e~i~~r~~~ 279 (378)
T PRK03080 209 PRA--VERLESYTPARPIPKFFR-----LTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWA--NSIGGLDALIARTAA 279 (378)
T ss_pred HHH--HHhhhcccCCCCCchhhe-----eccchHHhhhhhcCCcccCchHHHHHHHHHHHHHH--HHcCCHHHHHHHHHH
Confidence 998 666767655543211110 0000001122333 3457766653 4566665 455 89999999999
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+.+++++.|+++++++++......+. .+++|.+.+ .. ...+. .+...|.++ ||.++.|..|.
T Consensus 280 l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~-~~-------------~~~~~-~~~~~l~~~-~i~v~~g~~~~- 342 (378)
T PRK03080 280 NASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVD-AQ-------------AAVDA-AAVAKLLRE-NGAVDIEPYRD- 342 (378)
T ss_pred HHHHHHHHHHhCCCcccccCCccccCccEEEEEcCC-ch-------------HHHHH-HHHHHHHHc-CCeeccccccC-
Confidence 99999999999987888754223344 477776542 00 00123 355555554 88888664331
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
..+.+|+|+++|+|++|+++++++|+++++...
T Consensus 343 ----------------------------~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 343 ----------------------------APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred ----------------------------CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 147899999999999999999999999876543
No 25
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.4e-30 Score=279.33 Aligned_cols=369 Identities=14% Similarity=0.061 Sum_probs=255.7
Q ss_pred EEecCCC--------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEE--eCC
Q 038499 79 TYADHTA--------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIF--CGS 147 (609)
Q Consensus 79 vyld~~a--------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vif--t~s 147 (609)
+|+|+++ +++..+.+.+.+...+...++|++.. +.. +++.+++++++++++|+++. +++++ |++
T Consensus 35 iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~----~~~-~~le~~~~~~la~llg~~~~~~~~~g~~TsG 109 (431)
T TIGR01788 35 LSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEY----PQT-AEIENRCVNMLADLWHAPAKDAEAVGTSTIG 109 (431)
T ss_pred hhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccC----ccH-HHHHHHHHHHHHHHhCCCCCCCCCeEEEech
Confidence 3666666 67777778898888887666777652 333 48999999999999999832 25655 655
Q ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHh
Q 038499 148 GTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLE 226 (609)
Q Consensus 148 Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~ 226 (609)
||.+++..+..+.. .++.+....-....+++|++++.+|+|....++..|++++.|+++++ +.+|+++|+++|+
T Consensus 110 gTEAn~~al~~ar~-----~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~ 184 (431)
T TIGR01788 110 SSEAIMLGGLAMKW-----RWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD 184 (431)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh
Confidence 55544433322211 00011000000112348999999999999999989999999999875 5899999999998
Q ss_pred hhccCCCceEEEEecccCccccccCHHHHHHHHHHh------CCeEEEeccccCCc-------ccccCCCCCCCCccEEE
Q 038499 227 LYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY------GGFACFDFAASGPY-------VEIDVRSGQTDGYDAIF 293 (609)
Q Consensus 227 ~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~------g~~vivD~A~~~~~-------~~id~~~~~~~~~D~v~ 293 (609)
++|.+|++++++|.||.+.|+++|+++|+++ |+++|+|+|++++. .+.++. ..++|.++
T Consensus 185 -----~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis 256 (431)
T TIGR01788 185 -----ENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSIN 256 (431)
T ss_pred -----hCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEE
Confidence 5799999999999999999999999999999 99999999999544 344443 24789999
Q ss_pred EcCCCCCCCCCCcEEEEEechhhccCCC--CCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 294 LSTHKFLGGPGSPGILLMTKALYQLGSF--PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 294 ~S~hK~lggp~g~G~L~~~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
+|+|||+.||.|+|+|++++.......+ .+.+.++.... ...+.+.+.. ..+..-+.+..
T Consensus 257 ~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~-----------------~t~~~sR~g~-~al~~w~~l~~ 318 (431)
T TIGR01788 257 VSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPT-----------------FTLNFSRPAN-QVIAQYYNFLR 318 (431)
T ss_pred ECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCC-----------------cceecCchHH-HHHHHHHHHHH
Confidence 9999998789999999998763101111 11122222100 0011111111 11111111111
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 372 KEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 372 ~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
....|++.+.++..++++++.++|+++|+++++++. +++++++|.+.+ .. +..++..++.+.|.+
T Consensus 319 lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~--~~~~iV~Fr~~~-~~------------~~~~~~~~l~~~L~~ 383 (431)
T TIGR01788 319 LGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG--SGIPLVAFKLKD-DA------------DPGYTLYDLSHRLRE 383 (431)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC--CCceEEEEEeCC-CC------------CCCcCHHHHHHHHHH
Confidence 134688999999999999999999999999999762 478999999875 21 112567789999976
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.|+.+.. |..|- .+. ..-++|+++....+++.++.+++.|+.++.+.
T Consensus 384 -~G~~~~~---~~~p~--~~~---------------------~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 384 -RGWIVPA---YTLPK--NAE---------------------DIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred -CCCcccC---CCCCC--ccC---------------------CeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 5886531 11110 010 12568999988899999999999999988764
No 26
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=8.8e-31 Score=278.21 Aligned_cols=348 Identities=13% Similarity=0.040 Sum_probs=247.1
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccch
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
+|.|..+.+++.+.+...+. | .+....+.++++|+.+++++|++++ ++|++|+ |++.+++.++..+
T Consensus 8 ~pgp~~~~~~v~~~~~~~~~--~-----~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~-~~t~al~~~~~~l----- 74 (363)
T TIGR02326 8 TPGPLTTSRTVKEAMLFDWC--T-----WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQG-SGTFAVEAVIGSA----- 74 (363)
T ss_pred cCCCCCCCHHHHHHhCCCCC--C-----CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcC-CCHHHHHHHHHhc-----
Confidence 56666666667666654332 2 1235677889999999999999764 3688985 5555788877665
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+.++|. +|++.+.+|+.. ...++..|++++.++.++++.+|++++++++++. .+++++.+++++|
T Consensus 75 ----------~~~~~~-vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~ 140 (363)
T TIGR02326 75 ----------VPKDGK-LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD---PAITHIALVHCET 140 (363)
T ss_pred ----------CCCCCe-EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC---CCccEEEEEeecC
Confidence 256664 566667777664 3445778999999999888889999999999742 3567899999999
Q ss_pred ccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC
Q 038499 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS 324 (609)
Q Consensus 245 ~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~ 324 (609)
+||.+.|+++|+++||+||+++++|++++.+..++++..+ ++|++++|+|||++||.|+|+++++++. +..+.+.
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~~~--~~~~~~~ 215 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQAE--LAACKGN 215 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECHHH--HHHhhcC
Confidence 9999999999999999999999999999999999998876 7899999999999989999999999987 3333221
Q ss_pred ccCCCceEeecccccccc-cccc--cccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 325 TCGGGTVNYVNGFNEKDT-LYLE--DIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~-~~~~--~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
..+ .+.+ .... .+.. ....+++..++.+.++ .+++..+. +..|++.+.++.+++++++++.|+++ |+
T Consensus 216 ~~~----~~~~---~~~~~~~~~~~~~~~~ft~~~~~~~al-~~al~~l~-~~g~~~~~~~~~~~~~~~l~~~L~~~-g~ 285 (363)
T TIGR02326 216 ARS----LSLD---LYDQWRCMEDNHGKWRFTSPTHVVHAF-AQALLELE-KEGGVAARHQRYQQNQKTLVAGMRAL-GF 285 (363)
T ss_pred CCc----eeec---HHHHHHHHhccCCCCCCCCcHHHHHHH-HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 111 0000 0000 0000 0012222222232222 34444432 33468889999999999999999887 78
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHH
Q 038499 402 KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 402 ~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~ 481 (609)
+++.+. ..+.+++.+...+ .. ...+...+.+.|.+ .||.+++|..+.
T Consensus 286 ~~~~~~-~~~~~~~~~~~~~-~~-------------~~~~~~~v~~~L~~-~gi~v~~g~~~~----------------- 332 (363)
T TIGR02326 286 EPLLDD-EIQSPIITSFYSP-ED-------------PDYRFADFYQRLKE-QGFVIYPGKVSQ----------------- 332 (363)
T ss_pred eeccCc-ccCCceEEEEECC-CC-------------CCCCHHHHHHHHHH-CCEEEECCcCCC-----------------
Confidence 877553 2356665444444 10 01345678888865 599998764321
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
++++||+++.+++.+|+++++++|+.++
T Consensus 333 -------------~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 333 -------------VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred -------------CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3689999877899999999999998875
No 27
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3.2e-31 Score=288.77 Aligned_cols=362 Identities=15% Similarity=0.157 Sum_probs=263.1
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEe---CChHHHHHHHHHHHh
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTTNMVHE-ASNYIKKCLGGGQEDAMIFC---GSGTTAAIKRLQEVM 160 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~~~~~e-~r~~ia~~~g~~~~~~vift---~sGttaal~~l~~~l 160 (609)
..+++.|.+++...+...| +||++. +..|....+.+++ +|+.+++++|++++ +++++ .+|+. +...++..+
T Consensus 44 n~~s~~v~~~~~~~l~~~y~~g~p~s~-~~~g~~~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt~-an~~v~~al 120 (452)
T PTZ00094 44 NFTSRAVLECLGSCFTNKYAEGLPGNR-YYGGNEVVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGSP-ANFAVYTAL 120 (452)
T ss_pred ccCCHHHHHHhcchhhccccCCCCCcc-ccccchHHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchHH-HHHHHHHHh
Confidence 4677789999988888888 888875 5677777777774 89999999999876 66665 35554 455545544
Q ss_pred cccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc----------CceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 161 GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS----------LAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~----------G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+++|| .|++++.+|.++...|... +.++..++++.+|.+|+++|++++++
T Consensus 121 ---------------~~~gd--~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~--- 180 (452)
T PTZ00094 121 ---------------LQPHD--RIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA--- 180 (452)
T ss_pred ---------------cCCCC--EEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH---
Confidence 37888 7999999999988776421 13445566777799999999999974
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.+++++++. ++.+|...|+++|.++||++|+++++|++|++|..+.++.+....++|++++|+|||++||.| |+++
T Consensus 181 -~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~ 256 (452)
T PTZ00094 181 -FRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIF 256 (452)
T ss_pred -hCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEE
Confidence 367776654 346999999999999999999999999999999998887654335799999999999999998 8888
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
++++. ++.+.+.. .. ..+ . .+ .|+++...++..+.++......+.+.+.++..+++++
T Consensus 257 ~~~~~--~~~l~~~~-~~-------------~~~----p-~~-~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~ 314 (452)
T PTZ00094 257 YRKKV--KPDIENKI-NE-------------AVF----P-GL-QGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKA 314 (452)
T ss_pred Eeccc--chHHHHhh-cc-------------ccC----C-CC-CCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 88765 22111100 00 000 0 01 3555555544433333333445778889999999999
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe-ccCcccCChhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA-RGGCACAGPYGH 469 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v-~~G~~ca~p~~~ 469 (609)
+.+.|++. |+++..+....+..++.|...+ ++...+...| +.+||.+ +.|..|+.+ .+
T Consensus 315 l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~------------------~~~~~~~~~L-~~~gI~vs~~~~p~~~~-~~ 373 (452)
T PTZ00094 315 LAAALEKR-GYDLVTGGTDNHLVLVDLRPFG------------------ITGSKMEKLL-DAVNISVNKNTIPGDKS-AL 373 (452)
T ss_pred HHHHHHhC-CcEEecCCCCCceEeecCCcCC------------------CCHHHHHHHH-HHCCcEEecccCCCCCc-CC
Confidence 99999876 8888865322343344443322 4677888888 5579999 566555521 11
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC----HHHHHHHHHHHHHHHHhcccccCCCcccccCCceeec
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS----NEEFEFTLEALEFIAIYGQRFLPLYNFNIKTGTWCFM 544 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t----~eeid~ll~al~~v~~~~~~~~p~y~~~~~~~~w~~~ 544 (609)
+++++|+|+++++| ++|+++++++|.+++.....+.+.| ++.+++|.+.
T Consensus 374 ------------------------~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~ 426 (452)
T PTZ00094 374 ------------------------NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQV--GKKLVDFKKA 426 (452)
T ss_pred ------------------------CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhhhhhc--ccchhhhhhh
Confidence 36899999999987 9999999999999999988888788 7777776543
No 28
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2.2e-30 Score=274.17 Aligned_cols=336 Identities=16% Similarity=0.141 Sum_probs=247.6
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~ 157 (609)
.|+-|..+...+....+.+.......++|+... +..+..+.++.+++++++++++|+++++ ..+||++||.+++..+.
T Consensus 24 ~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~-~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~ 102 (380)
T PRK02769 24 FNVGYPEAADFDYSALKRFFSFSINNCGDPYSK-SNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCY 102 (380)
T ss_pred cccCCCchhhcCHHHHHHHHHhhhccCCCcccc-CCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHH
Confidence 344444444443344555556665567888764 4556678899999999999999998653 24888555555443332
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
.+.. +.+++ +|++++.+|+|+..+++..|.+++.|+.+++|.+|+++|+++|++. ..+|.+|
T Consensus 103 ~ar~--------------~~~~~--~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~--~~~t~lv 164 (380)
T PRK02769 103 LARE--------------LFPDG--TLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKEN--KNQPPII 164 (380)
T ss_pred HHHH--------------hCCCc--EEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhC--CCCcEEE
Confidence 2211 34565 7999999999999999999999999999889999999999999852 2358999
Q ss_pred EEecccCccccccCHHHHHHHHHHhC---CeEEEeccccCCccc-------ccCCCCCCCCccEEEEcCCCCCCCCCCcE
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYG---GFACFDFAASGPYVE-------IDVRSGQTDGYDAIFLSTHKFLGGPGSPG 307 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g---~~vivD~A~~~~~~~-------id~~~~~~~~~D~v~~S~hK~lggp~g~G 307 (609)
++++++|+||.+.|+++|+++|++|| +++|+|+|++++..+ +|+.. ++|++++|+|||+|+|.|+|
T Consensus 165 v~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~----~vDsis~s~HK~~~~P~g~G 240 (380)
T PRK02769 165 FANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD----GIDSIAISGHKFIGSPMPCG 240 (380)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC----CCCEEEECCcccCCCCCCcE
Confidence 99999999999999999999999998 699999999998775 44432 79999999999999999999
Q ss_pred EEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHH
Q 038499 308 ILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 308 ~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+++++++. +..+.+. ..|.. . ......||++....+ .+++.++ ...|++++.+++.
T Consensus 241 ~l~~r~~~--~~~~~~~------~~yl~-----------~-~d~t~~GSR~g~~~l~lw~aL~~l--g~~G~~~~~~~~~ 298 (380)
T PRK02769 241 IVLAKKKY--VERISVD------VDYIG-----------S-RDQTISGSRNGHTALLLWAAIRSL--GSKGLRQRVQHCL 298 (380)
T ss_pred EEEEehhh--hhhcccC------ccccC-----------C-CCCCccCCCCcHHHHHHHHHHHHH--CHHHHHHHHHHHH
Confidence 99999987 4444321 11111 1 111236777654433 4445544 5668999999999
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.++|++. +++++.+ +.+.+++|.... ..+. + |..+..
T Consensus 299 ~la~~l~~~L~~~-g~~~~~~---p~~~~v~f~~~~---------------------~~~~----~--~w~l~~------ 341 (380)
T PRK02769 299 DMAQYAVDRLQAN-GIPAWRN---PNSITVVFPCPS---------------------ERIW----K--KWHLAT------ 341 (380)
T ss_pred HHHHHHHHHHHhC-CCEEEcC---CCceEEEEcCCC---------------------HHHH----h--CeeEcc------
Confidence 9999999999875 8888876 456677764332 1221 2 444431
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|+.+....+.+.+|.+++.|......
T Consensus 342 ----------------------------~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 342 ----------------------------SGNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred ----------------------------cCCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 1368999998889999999999999887763
No 29
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=8.9e-32 Score=284.48 Aligned_cols=337 Identities=15% Similarity=0.136 Sum_probs=239.1
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhh---HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVG---QHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~---~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+.|+.|.+++.+.+..+. |++.+.+..+ ..+.+.++++|+.+++++|++.+++|+|+.+++|.+++.++..+-.
T Consensus 8 ~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~- 85 (355)
T cd00611 8 AALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG- 85 (355)
T ss_pred CCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-
Confidence 5678899999999886644 8887665555 5677999999999999999854458999955588899999887620
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCC-C-HHHHHHHHhhhccCCCceEEEEec
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLL-D-IEALRSKLELYKDAKRPILGSFSA 241 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~l-d-~e~L~~al~~~~~~~~~~lv~~s~ 241 (609)
+ .++++ +|++++++|.+. ...+..|++++.++.+++|.. + ++..+..++ +++++|+++|
T Consensus 86 -~----------~~~~~--~i~~g~~~~~~~-~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~lV~~~h 146 (355)
T cd00611 86 -D----------KGTAD--YVVTGAWSAKAA-KEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-----PDAAYVHYCS 146 (355)
T ss_pred -C----------CCeEE--EEECCHHHHHHH-HHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-----CCCCEEEEeC
Confidence 0 13555 677777777663 344667999999988655433 4 232233344 6899999999
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
++|.||...+ ++++.||++++||++|++|+.++|+.++ |++++|.||++| |.|+|++++++++ +.++
T Consensus 147 ~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~lG-P~G~g~l~~~~~~--~~~~ 213 (355)
T cd00611 147 NETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNLG-PAGVTVVIVRKDL--LGKA 213 (355)
T ss_pred CcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeecccccC-CCceEEEEECHHH--Hhhc
Confidence 9999999843 4455699999999999999999999875 567777999986 9999999999998 5555
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhCCC
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
.|..+. . ..+..........|||++..++ .+++++. +.. |++.+.++++++++++++.|+++
T Consensus 214 ~~~~~~--~-----------~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i~~~~~~l~~~l~~~l~~~ 278 (355)
T cd00611 214 RKITPS--M-----------LNYKTHADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAMEKRNRQKAQLLYDTIDNS 278 (355)
T ss_pred ccCCCC--c-----------ccHHHHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 554221 0 0011001122236899887765 4566665 566 79999999999999999999999
Q ss_pred CceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhc-CcEeccCcccCChhhhhhcCCCh
Q 038499 399 QNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLF-GIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 399 p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~-GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
||+.........|.+ +++|.+.. . .|.+.+ +|.+|.|. |+ +.+|.
T Consensus 279 ~gl~~~~~~~~~rs~~vvsf~~~~------------------~-------~l~~~~~~~~~r~G~-~~-~~~~~------ 325 (355)
T cd00611 279 NGFYRGPVDKRARSRMNVPFRLGK------------------E-------ELEKEFLKEAEAAGM-IG-LKGHR------ 325 (355)
T ss_pred ccccccCCCHHHcCceEEEEEcCC------------------h-------hhhHHHHHHHHHCCC-cc-cCCCc------
Confidence 885211111123664 48888655 1 111112 34455554 23 22331
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..|.+|+|+++|+|++||++++++|+++.
T Consensus 326 -----------------~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 326 -----------------SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred -----------------ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 14789999999999999999999999863
No 30
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=2.1e-28 Score=260.39 Aligned_cols=349 Identities=14% Similarity=0.078 Sum_probs=239.3
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccch
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
+|.|..+.+.+.+++...++ + ....+.+.++++++.+++++|++++ +.|+++++|+. ++..++..+
T Consensus 10 ~pgP~~~~~~~~~a~~~~~~--~-----~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~-~l~~~~~~l----- 76 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDWG--S-----WDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTF-SVEAAIGSL----- 76 (368)
T ss_pred cCCCCCCCHHHHHHhCCCCC--C-----CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHH-HHHHHHHhc-----
Confidence 45555555556665543321 1 1123446789999999999999753 36778865555 677776655
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEeccc
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACS 243 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~s 243 (609)
+.+|| .|++....+++. ...++..|++++.++.++++.+|++++++++++. ++++++.+++++
T Consensus 77 ----------~~~~~--~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~ 141 (368)
T PRK13479 77 ----------VPRDG--KVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD---PRITHVALVHCE 141 (368)
T ss_pred ----------cCCCC--eEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC---CCCcEEEEEccc
Confidence 25666 355544444433 2455778999999999877889999999999742 356789999999
Q ss_pred CccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC
Q 038499 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP 323 (609)
Q Consensus 244 n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p 323 (609)
|+||.+.|+++|+++||++|+++++|++++.+..++++..+ ++|++++|+|||++||.|+|++++++++ ++.+.+
T Consensus 142 ~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~~~--~~~~~~ 216 (368)
T PRK13479 142 TTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARRSE--LEACKG 216 (368)
T ss_pred CccccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECHHH--HHHhhc
Confidence 99999999999999999999999999999988888888765 7899999999999889889999999987 444432
Q ss_pred CccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 324 STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
..... +.+-.. ...........++ |+++..+ +.++++.+. +..+.+.+.++..++++++++.|.++ |+
T Consensus 217 ~~~~~----~~~~~~-~~~~~~~~~~~~~---t~~~~~~~~l~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 286 (368)
T PRK13479 217 NSRSL----SLDLYD-QWAYMEKTGQWRF---TPPTHVVAAFYQALLELE-EEGGVPARGARYANNQRTLVAGMRAL-GF 286 (368)
T ss_pred CCCCe----eecHHH-HHhhhcccCCCCC---CCcHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 21110 000000 0000000011122 4554443 244555442 33467888889999999999999887 78
Q ss_pred EEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHH
Q 038499 402 KILGNTSTKRQAI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY 480 (609)
Q Consensus 402 ~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~ 480 (609)
+++.+. ..+.+. ++|.... . ...+...+.+.|.+ .||.+++|..+.
T Consensus 287 ~~~~~~-~~~~~~~~~~~~~~-~--------------~~~~~~~l~~~L~~-~gi~v~~g~~~~---------------- 333 (368)
T PRK13479 287 EPLLDA-EIQSPIIVTFHAPA-D--------------PAYDFKEFYERLKE-QGFVIYPGKLTQ---------------- 333 (368)
T ss_pred cccCCc-hhcCceEEEEECCC-C--------------CCcCHHHHHHHHHH-CCEEEecCCCCC----------------
Confidence 776542 224444 4444332 1 01346788888866 599998653211
Q ss_pred HHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 481 QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 481 ~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+++|++...+++++|+++++++|+++++..
T Consensus 334 --------------~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 334 --------------VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred --------------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 3689999877899999999999999988754
No 31
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=2.4e-29 Score=265.13 Aligned_cols=309 Identities=17% Similarity=0.137 Sum_probs=224.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc
Q 038499 113 SYVGQHTTNMVHEASNYIKKCLGGG-QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH 191 (609)
Q Consensus 113 ~~~~~~~~~~~~e~r~~ia~~~g~~-~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h 191 (609)
+..+....++.+++++++++++|.+ .+.+++||+ |+|.++..++.++...... +.......++++++|++++.+|
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~-ggt~a~~~al~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~h 105 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTS-GGSESNLLALLAARDRARK---RLKAGGGRGIDKLVIVCSDQAH 105 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeC-ChhHHHHHHHHHHHHHhhh---hhhcccccccCCeEEEEcCcch
Confidence 4455667888999999999999986 334789994 5555666655554210000 0000001144555899999999
Q ss_pred cchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc-CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 192 HSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD-AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 192 ~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
+++...++..|++++.++.++++.+|+++|++++++... ..+++++++++++|+||.+.|+++|+++|++||+++|+|+
T Consensus 106 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 106 VSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred hHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence 999989988899999999988889999999999974211 1268899999999999999999999999999999999999
Q ss_pred cccCCcccccCCC---CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 271 AASGPYVEIDVRS---GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 271 A~~~~~~~id~~~---~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
|++.+..+.+... ....++|++++|+|||+++|.|+|+++++ .
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~--~-------------------------------- 231 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--A-------------------------------- 231 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH--H--------------------------------
Confidence 9988765543221 11136899999999999999988987655 1
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
....+++.++ ...|++.+.++..++++++.+.|+++++++++.+ +..++++|...+ ..
T Consensus 232 -------------~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~iv~f~~~~-~~--- 289 (345)
T cd06450 232 -------------LKLWATLRRF--GRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE---PNLSLVCFRLKP-SV--- 289 (345)
T ss_pred -------------HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC---CceeEEEEEECC-cc---
Confidence 0112333333 3457888899999999999999999999988765 356788888764 10
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC-C
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY-M 506 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~-~ 506 (609)
....+..++.+.|.++ |+.+.++..+. .++++|++++.+ +
T Consensus 290 ---------~~~~~~~~i~~~L~~~-g~~~~~~~~~~-----------------------------~~~~lRis~~~~~~ 330 (345)
T cd06450 290 ---------KLDELNYDLSDRLNER-GGWHVPATTLG-----------------------------GPNVLRFVVTNPLT 330 (345)
T ss_pred ---------hhhHHHHHHHHHHHhc-CCEEEEeeEEC-----------------------------CeEEEEEEecCCCC
Confidence 0013456788888664 55444322110 147899999876 5
Q ss_pred CHHHHHHHHHHHHH
Q 038499 507 SNEEFEFTLEALEF 520 (609)
Q Consensus 507 t~eeid~ll~al~~ 520 (609)
|++|+++++++|++
T Consensus 331 t~~di~~l~~~l~~ 344 (345)
T cd06450 331 TRDDADALLEDIER 344 (345)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999975
No 32
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=2.3e-28 Score=256.87 Aligned_cols=324 Identities=16% Similarity=0.152 Sum_probs=232.3
Q ss_pred HHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHH
Q 038499 93 IENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREK 171 (609)
Q Consensus 93 v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~ 171 (609)
+.+.+...+...++||.+. +..|..+.++.+++++++++++|+++++ ..+||++||.+++..+..+..
T Consensus 39 ~~~~~~~~~~~~~gnP~s~-~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~---------- 107 (374)
T PLN03032 39 ELSQLMKYSINNLGDPFIE-SNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGRE---------- 107 (374)
T ss_pred HHHHHHHhcccCCCCCccc-CCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHH----------
Confidence 5666777777778999885 5678889999999999999999998763 249996666666544433221
Q ss_pred HHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC
Q 038499 172 LIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD 251 (609)
Q Consensus 172 ~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d 251 (609)
..++. +|+++..+|+|+..+++..|.+++.||++++|.+|+++|+++|++.. .+|.++++++++|+||.+.|
T Consensus 108 ----~~~~~--~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~--~~~~lvv~tagtt~tG~idp 179 (374)
T PLN03032 108 ----VFPDG--ILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR--DKPAILNVNIGTTVKGAVDD 179 (374)
T ss_pred ----hCCCc--EEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC--CCCEEEEEEecCcCCccCCC
Confidence 12333 79999999999999999999999999999999999999999998421 26889999999999999999
Q ss_pred HHHHHHHHHHhC-----CeEEEeccccCCcccccCCC--CC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC
Q 038499 252 TRSIARLLHQYG-----GFACFDFAASGPYVEIDVRS--GQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP 323 (609)
Q Consensus 252 l~~I~~la~~~g-----~~vivD~A~~~~~~~id~~~--~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p 323 (609)
+++|+++|++|| +|+|+|+|++++..++.... .. ..++|.+++|+|||+|.|.|+|+|+++++. +..+..
T Consensus 180 i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~~ 257 (374)
T PLN03032 180 LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQ 257 (374)
T ss_pred HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhcc
Confidence 999999999997 58999999998877652210 00 126899999999999889999999999877 333211
Q ss_pred CccCCCceEeecccccccccccccccccccCCChhHH--HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 324 STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI--QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~--~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
...|+....... .|+.+-. ..+.+.+... ...|+..+.++..++++++.++|++. ++
T Consensus 258 -----------------~~~Yl~~~d~ti-~gSR~g~~~l~~w~~l~~~--G~~g~~~~~~~~~~~a~~l~~~l~~~-~~ 316 (374)
T PLN03032 258 -----------------NVEYLNSRDATI-MGSRNGHAPLYLWYTLRRK--GYRGIKRDVQHCMRNAHYLKDRLTEA-GL 316 (374)
T ss_pred -----------------CCcccCCCCCcc-cCCCchHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 011111111111 2343211 1222333322 34567788899999999999999886 67
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHH
Q 038499 402 KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 402 ~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~ 481 (609)
+++.+ +.+.+++|.... .. .+.+ |..+..
T Consensus 317 ~~~~~---p~~~~V~f~~~~--------------------~~----~~~~--~w~l~~---------------------- 345 (374)
T PLN03032 317 TCRLN---ELSSTVVFERPM--------------------DE----AFIK--KWQLAC---------------------- 345 (374)
T ss_pred cEEEC---CCceEEEEcCCC--------------------cH----hHhh--eeeecc----------------------
Confidence 76654 244555554432 11 1212 443330
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++|+.+.+..+.+.+|.|++.|+++
T Consensus 346 ------------~~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 346 ------------EGDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ------------cCCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 1358999998888999999999988753
No 33
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=5.6e-28 Score=257.29 Aligned_cols=334 Identities=16% Similarity=0.098 Sum_probs=236.8
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
+++.+.+. ..+.+.+++.+++...++++.. .. ....+.+++++++++++|.++. .++++++ +++++..++.+
T Consensus 24 ~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~la~~~g~~~~-~~~~~~g-gt~a~~~a~~~ 95 (371)
T PRK13520 24 ILSSMCTE-PHPIARKAHEMFLETNLGDPGL---FP--GTAKLEEEAVEMLGELLHLPDA-YGYITSG-GTEANIQAVRA 95 (371)
T ss_pred eeeeeecC-chHHHHHHHHHHHhcCCCCccc---Cc--cHHHHHHHHHHHHHHHhCCCCC-CeEEecC-cHHHHHHHHHH
Confidence 57776644 4555668887777654444432 12 3566778999999999998765 6788844 45555555444
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
+.- . ..++++ .|+++..+|++....++..|++++.++.++++.+|+++|+++|+ ++++++++
T Consensus 96 ~~~-~----------~~~~~~--~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~~~vi~ 157 (371)
T PRK13520 96 ARN-L----------AKAEKP--NIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-----DNTIGIVG 157 (371)
T ss_pred HHh-h----------ccCCCc--eEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-----hCCEEEEE
Confidence 310 0 012455 79999999999888888889999999998888999999999998 56877778
Q ss_pred ecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc-------ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE-------IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 240 s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~-------id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
++++|+||.+.|+++|.++||+||+++++|++|+.+..+ +++. ..++|++++|+|||.++|.++|+++++
T Consensus 158 ~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~---~~~vd~~~~s~~K~~~a~~~~G~~~~~ 234 (371)
T PRK13520 158 IAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFS---LPGVDSITIDPHKMGLAPIPAGGILFR 234 (371)
T ss_pred EcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCcccc---CCCCceEEECCccccCccCCceEEEEc
Confidence 888999999999999999999999999999999865433 2222 237899999999998878778888876
Q ss_pred ch-hhccCCCC---CCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 313 KA-LYQLGSFP---PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 313 ~~-~~~l~~~~---p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
++ + ++.+. |...++. .....||++.... +.+++.+. ...|.+.+.++..+
T Consensus 235 ~~~~--~~~l~~~~~~~~~~~--------------------~~~~~gt~~~~~~~~~~~al~~l--~~~g~~~~~~~~~~ 290 (371)
T PRK13520 235 DESY--LDALAVDTPYLTSKK--------------------QATLTGTRSGAGVAATYAVMKYL--GREGYRKVVERCME 290 (371)
T ss_pred CHHH--HHhhcccCccccCCC--------------------CcceEeeccChHHHHHHHHHhhh--cHhHHHHHHHHHHH
Confidence 54 4 23321 1111110 1112345443332 23344433 34577888899999
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+++++.+.|+++ ++++..+ +..+++++.+. +..++.+.|.+ .||.++++ .
T Consensus 291 ~~~~l~~~L~~~-g~~~~~~---~~~~~v~~~~~--------------------~~~~v~~~L~~-~gi~v~~~---~-- 340 (371)
T PRK13520 291 NTRWLAEELKER-GFEPVIE---PVLNIVAFDDP--------------------NPDEVREKLRE-RGWRVSVT---R-- 340 (371)
T ss_pred HHHHHHHHHHhC-CCEEecC---CCceEEEEecC--------------------CHHHHHHHHHH-CCceeccC---C--
Confidence 999999999987 8874333 23455555432 25688888866 49998742 1
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++|+|+++++|++|+++++++|+.+++
T Consensus 341 ---------------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 ---------------------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ---------------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 146899999999999999999999998764
No 34
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.97 E-value=1.2e-28 Score=259.05 Aligned_cols=335 Identities=14% Similarity=0.131 Sum_probs=236.5
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhH---HHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQ---HTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~---~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
..|..|++++.+++..+. |.+.+.+..+. .+.++++++++.++++++.+.+.+|+|+.+++|.++++++..+
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl---- 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL---- 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc----
Confidence 468899999999887665 77776553333 4458999999999999998544478887554777899888765
Q ss_pred hhhHHHHHHhhhcCCCce-EEEECCCCccchHHHHHHcCceEEEEecCC----CCCCCHHHHHHHHhhhccCCCceEEEE
Q 038499 165 PSILREKLIKCLRDEERW-VVFVGPHEHHSNLLSWRQSLAEVVEIGLDD----DGLLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~-~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~----~g~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
+++|++. ++..+.++|.. ...++..|+ ++.+..++ ...+++++++ ++ +++++|++
T Consensus 77 -----------~~~~~~~l~i~~G~fg~r~-~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~v~~ 136 (349)
T TIGR01364 77 -----------LAEGKVADYIVTGAWSKKA-AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--IS-----EDAAYVHY 136 (349)
T ss_pred -----------CCCCCeEEEEECCHHHHHH-HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CC-----CCCCEEEE
Confidence 3566652 23334444443 345566788 77776542 2245666554 23 57899999
Q ss_pred ecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccC
Q 038499 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLG 319 (609)
Q Consensus 240 s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~ 319 (609)
+|+.|.||+..| ++++.++++++||+++++|+.++|+..+ |++++|.||++| |.|+|++++++++ ++
T Consensus 137 th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~~-----d~~~~ssqK~lg-P~Glg~l~~s~~~--~~ 203 (349)
T TIGR01364 137 CANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSKF-----GLIYAGAQKNIG-PAGLTVVIVRKDL--LG 203 (349)
T ss_pred cCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHHHc-----cEEEEecccccC-CCceEEEEECHHH--Hh
Confidence 999999999987 6677789999999999999999999864 699999999997 9999999999999 55
Q ss_pred CCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhC
Q 038499 320 SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.|... .. ..|..........|||++..+. .+++++. ..+ |++.+.++++++++++++.|+
T Consensus 204 ~~~~~~~--~~-----------~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~ 268 (349)
T TIGR01364 204 RASRITP--SM-----------LNYKIHAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAIEKRNQAKAQLLYDTID 268 (349)
T ss_pred hcccCCC--Cc-----------chHHHHHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555311 00 0011001112335899987766 4555555 566 799999999999999999999
Q ss_pred CCCceEEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 397 PNQNIKILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
+++|+.........+. ++++|.+.. .. + ...+.+.+.+ .||.+..| +.
T Consensus 269 ~~~gl~~~~~~~~~rs~~v~sf~~~~-~~---------------~-~~~~~~~~~~-~Gi~~~~~--------~~----- 317 (349)
T TIGR01364 269 NSNGFYRNPVDPRNRSRMNVVFTLGN-EE---------------L-EKRFLKEAEE-RGLVSLKG--------HR----- 317 (349)
T ss_pred hCCCeeccCCCHHHcCCeEEEEecCC-hh---------------H-hHHHHHHHHH-CCCcccCC--------cc-----
Confidence 9988655532112355 457777654 10 1 1334344432 46644432 11
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+.+|+|+.+|+|.+||++++++|+++.++
T Consensus 318 ------------------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 318 ------------------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ------------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1478999999999999999999999997753
No 35
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=5.5e-28 Score=255.58 Aligned_cols=320 Identities=16% Similarity=0.121 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLL 196 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~ 196 (609)
..+.++++++.+++++|++++. .|+++++|+. ++..++..+ +.++|+ +|++.+.+|++ ...
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~-~l~~~~~~~---------------~~~~~~-vi~~~~~~~~~~~~~ 91 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTF-AVEATIGSL---------------VPRDGK-LLVLINGAYGERLAK 91 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHH-HHHHHHHhc---------------cCCCCe-EEEECCCchhhHHHH
Confidence 3578999999999999998753 5778866655 677777665 256664 56666666655 334
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.++..|++++.++.++++.+|+++++++++++ ++++++++++++|+||.+.|+++|+++|++||+++++|++++.+.
T Consensus 92 ~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~ 168 (355)
T TIGR03301 92 ICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD---PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA 168 (355)
T ss_pred HHHHcCCceEEEecCCCCCCCHHHHHHHHHhC---CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC
Confidence 56678999999998877889999999999742 456788899999999999999999999999999999999999888
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
.++++... ++|++++|+|||++||.|+|++++++++ ++.+....... +.+ +. ....+.. ..+....|
T Consensus 169 ~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~--~~~~~~~~~~~----~~~-~~-~~~~~~~--~~~~~~~t 235 (355)
T TIGR03301 169 IPIDIEEL---DVDALIASANKCLEGVPGFGFVIARRDL--LEASAGNARSL----YLD-LY-DQWAYME--KTGKWRFT 235 (355)
T ss_pred cccchhhc---CccEEEecCCcccccCCceeEEEECHHH--HHHhhCCCCCc----eee-HH-HHHHHhh--hcCCCCCC
Confidence 78877765 7899999999999888889999999988 33332110000 000 00 0000000 01112345
Q ss_pred hhHHHHH--HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceE-EEEeccCCCCCcCCCCC
Q 038499 357 PQVIQMI--RAALAFWVKEYIG-HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAIL-SFNIHSSTINSSLGENT 432 (609)
Q Consensus 357 p~i~~~~--~aal~~~~~~~~g-~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~-~f~~~~~~~~~~~~~~~ 432 (609)
++..... .+++... ...| .+.+.++.+++++++.+.|+++ ++++..+.. .+.+++ ++.+.. ..
T Consensus 236 ~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~-~~~~~~~~~~~~~-~~-------- 302 (355)
T TIGR03301 236 PPTHTVYAFAQALEEL--EAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPER-WQSPIIVSFLYPD-DP-------- 302 (355)
T ss_pred CcHHHHHHHHHHHHHH--HHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCC-CCCCcEEEEECCC-CC--------
Confidence 5544433 3444443 2334 7888888999999999999887 787765532 344444 444332 10
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
..+..++.+.|.+ .||.+++|..+. .+++||+++.+++++|++
T Consensus 303 ------~~~~~~~~~~l~~-~gi~i~~~~~~~------------------------------~~~iRis~~~~~~~~~i~ 345 (355)
T TIGR03301 303 ------DFDFDDFYQELKE-RGFVIYPGKLTL------------------------------ADTFRIGTIGEIDAADIE 345 (355)
T ss_pred ------cchHHHHHHHHHH-CCEEEECCcccc------------------------------ccEEEEecCCCCCHHHHH
Confidence 1245688888866 599998664211 268999999899999999
Q ss_pred HHHHHHHHH
Q 038499 513 FTLEALEFI 521 (609)
Q Consensus 513 ~ll~al~~v 521 (609)
+++++|+++
T Consensus 346 ~~~~~l~~~ 354 (355)
T TIGR03301 346 RLLEAIKDA 354 (355)
T ss_pred HHHHHHHhh
Confidence 999999875
No 36
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.8e-27 Score=254.77 Aligned_cols=348 Identities=18% Similarity=0.175 Sum_probs=241.7
Q ss_pred CCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 85 ASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 85 a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
-.||+++.+.+++.++. ..++|+....+..+........++++.+++++|++ +++|+ +|+++++..++..+
T Consensus 28 ~~~p~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~-~g~t~a~~~al~~l---- 98 (387)
T PRK09331 28 RGGILTPEARKALIEYG-DGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD---EARVT-HGAREGKFAVMHSL---- 98 (387)
T ss_pred cCCCCCHHHHHHHHHHH-hccCCCcccccccccccChHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHh----
Confidence 34899999999999887 45566543123344445567999999999999985 46777 67777788777765
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec--CCCCCCCHHHHHHHHhhhc--cCCCceEEEEe
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL--DDDGLLDIEALRSKLELYK--DAKRPILGSFS 240 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~--~~~g~ld~e~L~~al~~~~--~~~~~~lv~~s 240 (609)
+++|| .|+++..+|++....++..|++++.++. ++++.+|++++++++++.. ..+++++++++
T Consensus 99 -----------~~~gd--~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 -----------CKKGD--YVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred -----------cCCCC--EEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 37888 6999999999999888889999999998 6678899999999997421 11368999999
Q ss_pred cccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC
Q 038499 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS 320 (609)
Q Consensus 241 ~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~ 320 (609)
+++|+||.+.|+++|+++||+||+++++|++|+.|..+++...+ ++|++++|+||++++|.|.|++++++++ ++.
T Consensus 166 ~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~---g~D~~~~s~~K~l~~~~~~G~l~~~~~~--i~~ 240 (387)
T PRK09331 166 HVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL---GADFIVGSGHKSMAASAPSGVLATTEEY--ADK 240 (387)
T ss_pred CCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECHHH--Hhh
Confidence 99999999999999999999999999999999999888887765 7899999999999999899999999987 333
Q ss_pred CCCCccCCCceEeecccccccccccccccccccCCChh--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC
Q 038499 321 FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ--VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~--i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
+......... . + ...+ .++.. ....+.+++..+... . ...++..+.++++++.|+++
T Consensus 241 ~~~~~~~~~~---------~---~----~~~~-~~~~~~~~~~~~~aal~~~~~~---~-~~~~~~~~~~~~l~~~L~~l 299 (387)
T PRK09331 241 VFRTSRKFGV---------K---E----VELL-GCTLRGAPLVTLMASFPHVVER---V-KRWDEEVKKARWFVDELEKI 299 (387)
T ss_pred cccccCCCcc---------c---c----eeee-ceecCchHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHhcC
Confidence 3221100000 0 0 0001 11111 111112333332211 1 23445567788999999999
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhH
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~ 478 (609)
+|++++... ....+++.+.... -. . ...+.......+.+.|.+ +||..-.. +
T Consensus 300 ~g~~~~~~~-~~~~~i~~~~~~~-~~-~-------~~~~~~~~~~~~~~~L~~-~gI~~~~~-------~---------- 351 (387)
T PRK09331 300 EGFKQLGEK-PRNHDLMKFETPS-FD-E-------IAKKHKRRGFFLYEELKK-RGIHGIKP-------G---------- 351 (387)
T ss_pred CCEEEeccC-cCcCCeEEEeCCc-hh-H-------HhhhccccchhHHHHHHH-cCceEEcc-------C----------
Confidence 999998632 1233444443221 00 0 000111245678888865 59973210 0
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
....+|+.. ...|++|+++++++|+++.++
T Consensus 352 ---------------~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 352 ---------------ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred ---------------CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 023455554 447999999999999999775
No 37
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-27 Score=246.64 Aligned_cols=329 Identities=18% Similarity=0.172 Sum_probs=254.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
....+..++.++.+.++..++.+..+.++++|+||. ++...+..+ ++|||+ |++....-++.
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~-amEAav~sl---------------~~pgdk--VLv~~nG~FG~ 93 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTL-AMEAAVASL---------------VEPGDK--VLVVVNGKFGE 93 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHH-HHHHHHHhc---------------cCCCCe--EEEEeCChHHH
Confidence 456788999999999999999986557788877777 566655544 589996 55544444443
Q ss_pred H--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccc
Q 038499 195 L--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 195 ~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~ 272 (609)
. ..++.+|++++.+..++.-.+|+++++++|+++ +..+++++.|+.++||++.|+++|+++|++||+++|||+..
T Consensus 94 R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~---~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVs 170 (383)
T COG0075 94 RFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD---PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVS 170 (383)
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC---CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecc
Confidence 3 345678999999999888889999999999953 57789999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc-c
Q 038499 273 SGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE-R 351 (609)
Q Consensus 273 ~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~-r 351 (609)
+.|..++++.++ ++|+++++++|++++|.|.|++.++++.. +.+......+ |..+...|++..+. +
T Consensus 171 S~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~--e~~~~~~~~~--------~ylDL~~~~~~~~~~~ 237 (383)
T COG0075 171 SLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERAL--EAIEERKHPS--------FYLDLKKWLKYMEKKG 237 (383)
T ss_pred cCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHH--HHHhcCCCCc--------eeecHHHHHHHHhhcC
Confidence 999999999997 99999999999999999999999999883 3332111111 12233333333333 5
Q ss_pred ccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 352 ESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 352 ~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
....||++..+. +.++... ...|.+.+.+|++.+++++++.+.++ |++++. .+..+++.++-...+.+
T Consensus 238 ~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~-~~~~~s~tvta~~~P~g------ 307 (383)
T COG0075 238 STPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEAL-GLELFA-DPERRSPTVTAIKVPEG------ 307 (383)
T ss_pred CCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCcccc-CcccCCCceEEEECCCC------
Confidence 667788776655 4555544 56789999999999999999999998 999998 34466766666655512
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
++..++...+.+++||.+.+|.. + ++...+||+.--+.+.+
T Consensus 308 ----------~~~~~~~~~~~~~~g~~i~gg~~------~-----------------------l~gkifRIGhMG~~~~~ 348 (383)
T COG0075 308 ----------VDDKKVRRALLKEYGVEIAGGQG------P-----------------------LKGKIFRIGHMGNVRPE 348 (383)
T ss_pred ----------CCcHHHHHHHHHhCCEEeccccc------c-----------------------cCccEEEEecCccCCHH
Confidence 34555666777889999987642 1 13578999975589999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 038499 510 EFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 510 eid~ll~al~~v~~~~~ 526 (609)
++...+.+|+.++....
T Consensus 349 dv~~~l~ale~~L~~~g 365 (383)
T COG0075 349 DVLAALAALEAALRELG 365 (383)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998754
No 38
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.96 E-value=3.6e-28 Score=256.69 Aligned_cols=339 Identities=13% Similarity=0.122 Sum_probs=236.9
Q ss_pred CCCCCChHHHHHHHHHhhcCCccCCCCCCc---hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHh
Q 038499 84 TASGRSLRYIENYIINNVLPFYGNTHTCDS---YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVM 160 (609)
Q Consensus 84 ~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~---~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l 160 (609)
.+....|+.|.+++.+.+..+. +.+.+.+ +....+.++++++++.+++++|++.+.+|+|+.+++++++..++..+
T Consensus 9 pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl 87 (360)
T PRK05355 9 AGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNL 87 (360)
T ss_pred CCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhc
Confidence 4446678899999988775543 4444332 33445569999999999999998543467777566677788776554
Q ss_pred cccchhhHHHHHHhhhcCCCce-EEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHH-HHhhhccCCCceEE
Q 038499 161 GIAVPSILREKLIKCLRDEERW-VVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRS-KLELYKDAKRPILG 237 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~-~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~-al~~~~~~~~~~lv 237 (609)
+.+|++. +|..+.++|.. ...++..|.. +.+..++ .+..+..++++ +|+ .++++|
T Consensus 88 ---------------~~~g~~~l~i~~G~fg~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-----~~~~~V 145 (360)
T PRK05355 88 ---------------LGGGKKADYVDTGSWSKKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-----DDAAYV 145 (360)
T ss_pred ---------------CCCCCeEEEEECCHHHHHH-HHHHHHhCCc-eEEecccccCCCCCCChhhccCC-----CCCCEE
Confidence 4666652 34445555554 3455667865 6666554 56666666666 666 478999
Q ss_pred EEecccCcccccc-CHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh
Q 038499 238 SFSACSNVTGIYS-DTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY 316 (609)
Q Consensus 238 ~~s~~sn~TG~~~-dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~ 316 (609)
+++|+.|.||++. |+++| ||++++||+++++|+.++|+.++ |++++|.||++| |.|+|++++++++
T Consensus 146 ~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~-----d~~~~ssqK~lg-P~Glg~l~~s~~~- 212 (360)
T PRK05355 146 HYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF-----GLIYAGAQKNIG-PAGLTIVIVREDL- 212 (360)
T ss_pred EEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc-----cEEEEecccccc-CCceEEEEECHHH-
Confidence 9999999999998 77766 89999999999999999999864 699999999997 9999999999999
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEETYIERALE 393 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~~~~ 393 (609)
++++.|. .+ ++.++. .+ .......+||++..+. .+++++. ..+ |.+.+.+|++++++++++
T Consensus 213 -l~~~~~~-~~-~~~~~~--------~~---~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i~~r~~~l~~~l~~ 276 (360)
T PRK05355 213 -LGRALPS-IP-SMLDYK--------TH---ADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAMEKRNQEKAALLYD 276 (360)
T ss_pred -HhhcccC-CC-hHHHHH--------HH---HhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHH
Confidence 5566553 12 121111 01 1222345899988776 4555555 567 899999999999999999
Q ss_pred HhCCCCceEEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 394 RLLPNQNIKILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
.|++++.+..+.+. ..|+ .+++|.+.. . ....++.+.+.+ .||.+..| +.
T Consensus 277 ~l~~~~~~~~~~~~-~~rs~~v~sf~~~~-~----------------~~~~~~~~~~~~-~Gi~~~~~--------~~-- 327 (360)
T PRK05355 277 AIDSSDFYRNPVAP-EDRSRMNVPFTLAD-E----------------ELDKKFLAEAKA-AGLVGLKG--------HR-- 327 (360)
T ss_pred HHHhCCCcccCCCh-hhcCCcEEEEEcCC-h----------------HHHHHHHHHHHH-CCCcccCC--------CC--
Confidence 99998633333221 2355 457887654 1 112333334432 46654322 11
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..|.+|+|+++|+|.+||++++++|+++++.
T Consensus 328 ---------------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 328 ---------------------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred ---------------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1478999999999999999999999998764
No 39
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=7e-27 Score=249.13 Aligned_cols=353 Identities=18% Similarity=0.104 Sum_probs=235.8
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIK 131 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia 131 (609)
++.++.+++.+-| ..|++.++ ++++....|.+ .+.+++...+....++++. +. ....+.+++++.++
T Consensus 3 ~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~la 69 (373)
T TIGR03812 3 EEVLEELKEYRSE-----DLKYSDGR--ILGSMCTNPHP-IAVKAYDMFIETNLGDPGL---FP--GTKKIEEEVVGSLG 69 (373)
T ss_pred HHHHHHHHHHHhc-----CCCCCCCc--EEEEEeCCchH-HHHHHHHHHhhcCCCCccc---Cc--cHHHHHHHHHHHHH
Confidence 3455666664322 12333322 34444444433 3456666655544455432 12 24577889999999
Q ss_pred HHhCCCCCCcEEEeCChHHHHHHHHHHHhc-ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 132 KCLGGGQEDAMIFCGSGTTAAIKRLQEVMG-IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 132 ~~~g~~~~~~vift~sGttaal~~l~~~l~-~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
+++|+++. +++++ +|++.++..++.++. +..+ -++|| .|+++..+|+++...++..|++++.++.
T Consensus 70 ~~~g~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~----------~~~g~--~vl~~~~~h~~~~~~~~~~G~~~~~v~~ 135 (373)
T TIGR03812 70 NLLHLPDA-YGYIV-SGGTEANIQAVRAAKNLARE----------EKRTP--NIIVPESAHFSFEKAAEMLGLELRYAPL 135 (373)
T ss_pred HHhCCCCC-CeEEe-ccHHHHHHHHHHHHHHHHhc----------cCCCc--EEEECCcchHHHHHHHHHcCCeEEEEee
Confidence 99999866 66666 455555555544331 0000 03456 6999999999988888889999999999
Q ss_pred CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc----------ccc
Q 038499 211 DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV----------EID 280 (609)
Q Consensus 211 ~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~----------~id 280 (609)
++++.+|+++|+++++ +++..+++.+++|+||.+.|+++|.++||++|+++++|+||+.+.. .++
T Consensus 136 ~~~~~~d~~~l~~~l~-----~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 136 DEDYTVDVKDVEDLID-----DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred CCCCCcCHHHHHHHHh-----hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 8888999999999997 4565444444789999999999999999999999999999875432 233
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEE-echhhccCCCC---CCccCCCceEeecccccccccccccccccccCCC
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLM-TKALYQLGSFP---PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~-~~~~~~l~~~~---p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
+.. .++|++++|+|||..+|.++|++++ ++++ ++.+. |...++ ......||
T Consensus 211 ~~~---~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~--~~~l~~~~~~~~~~--------------------~~~~~~gt 265 (373)
T TIGR03812 211 FSL---PGVQSITIDPHKMGLSPIPAGGILFRSKSY--LKYLSVDAPYLTVK--------------------KQATITGT 265 (373)
T ss_pred ccC---CCCCEEEECccccCCCcCCceEEEEeCHHH--HhhhcccCcccCCC--------------------CCcceEee
Confidence 322 3789999999998777777776664 5555 33331 110000 01112366
Q ss_pred hhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC
Q 038499 357 PQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 357 p~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~ 434 (609)
++..... .+++..+ ...|.+.+.++..++++++++.|++++...++.+ ..++++|....
T Consensus 266 ~~~~~~~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~v~~~~~~------------- 326 (373)
T TIGR03812 266 RSGASAAATYAVIKYL--GREGYRKIVAECMENTRYLVEELKKIGFEPVIEP----VLNIVAFEVDD------------- 326 (373)
T ss_pred chhHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC----CceEEEEEeCC-------------
Confidence 6655443 3333332 3557788899999999999999998843334432 34566554432
Q ss_pred CCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 038499 435 ETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFT 514 (609)
Q Consensus 435 ~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~l 514 (609)
...+.+.|.+ .||.++.+. .++++|+++++++|++|++++
T Consensus 327 -------~~~v~~~L~~-~gi~v~~~~--------------------------------~~~~iRis~~~~~t~edid~l 366 (373)
T TIGR03812 327 -------PEEVRKKLRD-RGWYVSVTR--------------------------------CPKALRIVVMPHVTREHIEEF 366 (373)
T ss_pred -------HHHHHHHHHH-CCceeccCC--------------------------------CCCEEEEEEECCCCHHHHHHH
Confidence 3578888866 499987421 147899999999999999999
Q ss_pred HHHHHH
Q 038499 515 LEALEF 520 (609)
Q Consensus 515 l~al~~ 520 (609)
+++|++
T Consensus 367 ~~~L~~ 372 (373)
T TIGR03812 367 LEDLKE 372 (373)
T ss_pred HHHHhh
Confidence 999976
No 40
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.96 E-value=6.7e-28 Score=255.03 Aligned_cols=338 Identities=12% Similarity=0.121 Sum_probs=233.4
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.|.+++.+....... .++.+....+.++++|+.+++++|++++.+|+|+.+++|.+++.++..+
T Consensus 14 ~~~~v~~a~~~~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l-------- 80 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFG-----TSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL-------- 80 (361)
T ss_pred CCHHHHHHHHhcCccccc-----cCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc--------
Confidence 455666665533211111 1234566789999999999999999654478886455666898887655
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHc---CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS---LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~---G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+. ++ .+++..-+|.+....+... +.++..++.++...++. .+. +++++|+++|++|.
T Consensus 81 -------~~-~~--~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~lV~~~h~et~ 140 (361)
T TIGR01366 81 -------IE-KK--SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-----PGVDVIAWAHNETS 140 (361)
T ss_pred -------cc-cc--ccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-----CCCCEEEEcccCCc
Confidence 12 22 3444445554443332221 23677777665443433 233 68999999999999
Q ss_pred cccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCc
Q 038499 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPST 325 (609)
Q Consensus 246 TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~ 325 (609)
||.+.|+++| +|++|++++||+++++|+.++|+.. +|++++|+||++|+|+|.+++++++++ ++++.+..
T Consensus 141 tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-----~D~~~~s~~K~lg~~~Gl~~~~~s~~~--~~~~~~~~ 210 (361)
T TIGR01366 141 TGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-----TDVYYFAPQKNFASDGGLWLAIMSPAA--LERIEAIA 210 (361)
T ss_pred cceecccccc---cccCCCeEEEEcCccccCCCCCHHH-----CCEEEEEchhhcCCCCceEEEEECHHH--Hhhhhccc
Confidence 9999999988 5889999999999999999999973 699999999999999889999999998 55666665
Q ss_pred cCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 326 CGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 326 ~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
.++..+.+. .+...+.....+....+||++..+. .++++++ +.. |.+.+.++++++++++++.+.++++++
T Consensus 211 ~~~~~~p~~----~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~ 284 (361)
T TIGR01366 211 ASGRWVPEF----LSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWM--NGNGGLDWAVARTADSSSRLYSWAQERPYAT 284 (361)
T ss_pred CCCCCCchh----hhHHHHHhccccCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 554432110 0111122111223445677776543 5566665 445 699999999999999999999997777
Q ss_pred EeCCCC---CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHH
Q 038499 403 ILGNTS---TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQS 479 (609)
Q Consensus 403 v~~~~~---~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~ 479 (609)
++.... .+..+.++| . . + ++..++.+.|.+ +||.+.+| +.. +
T Consensus 285 ~~~~~~~~~s~~v~~v~~-~-~-g----------------~~~~~v~~~L~~-~gI~i~~~------~~~-l-------- 329 (361)
T TIGR01366 285 PFVTDPGKRSQVVGTIDF-V-D-D----------------IDAATVAKILRA-NGIVDTEP------YRK-L-------- 329 (361)
T ss_pred cCCCChhhcccceEEEEC-C-C-c----------------cCHHHHHHHHHH-CCCeeccC------ccc-c--------
Confidence 765322 223344555 2 3 2 578899999955 59998643 111 1
Q ss_pred HHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 480 YQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 480 ~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++.+|+|++.|+|.+|+++++++|++++++
T Consensus 330 --------------~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 330 --------------GRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred --------------CCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 2468999999999999999999999998764
No 41
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=3.2e-26 Score=250.77 Aligned_cols=359 Identities=17% Similarity=0.153 Sum_probs=239.9
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH--HHhcccc
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDS-YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ--EVMGIAV 164 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~-~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~--~~l~~~~ 164 (609)
..++.|.+++.+.- .+.+.+.... ....+..+++.++++++++++|.+. ..++.++|+++.+..+. +.+.
T Consensus 81 ~~~p~i~~~~~~~~--~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~--~~l~~~~GA~a~~~~l~~~r~~~--- 153 (481)
T PRK04366 81 KYNPKINEKVARLP--GFAELHPLQPEETVQGALELMYELQEWLKEITGMDA--VTLQPAAGAHGELTGLLMIRAYH--- 153 (481)
T ss_pred CCCHHHHHHHHhCc--chhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCc--eEEEeCcHHHHHHHHHHHHHHHh---
Confidence 45667888877642 1233333111 2455677899999999999999973 45565677776555332 2111
Q ss_pred hhhHHHHHHhhhcCCC--ceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecc
Q 038499 165 PSILREKLIKCLRDEE--RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSAC 242 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~ 242 (609)
+++|| +..|+++..+|+++...++..|++++.++.+.++.+|+++|+++++ +++++++++++
T Consensus 154 -----------~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-----~~t~~V~v~~P 217 (481)
T PRK04366 154 -----------EARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-----EDTAALMLTNP 217 (481)
T ss_pred -----------hccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-----cCCeEEEEeCC
Confidence 24443 3379999999999999999999999999998889999999999997 68999999987
Q ss_pred cCccccc-cCHHHHHHHHHHhCCeEEEeccccCCccc-ccCCCCCCCCccEEEEcCCCCCCCCCC-----cEEEEEechh
Q 038499 243 SNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYVE-IDVRSGQTDGYDAIFLSTHKFLGGPGS-----PGILLMTKAL 315 (609)
Q Consensus 243 sn~TG~~-~dl~~I~~la~~~g~~vivD~A~~~~~~~-id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~L~~~~~~ 315 (609)
+ +||.+ .|+++|+++||++|+++++|+|+..+... ++...+ |+|++++++|||||+|.| .|++++++++
T Consensus 218 n-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 218 N-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred C-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 6 99987 58999999999999999999998765332 333333 899999999999987743 5799999988
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
++.+++...|...-.|...+. .....+|++.++.+++.++++...+......|++.+.++...+++++.++|
T Consensus 294 --~~~lp~~~v~~~g~~~~l~~~------r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L 365 (481)
T PRK04366 294 --APFLPVPVVEKDGDRYRLDYD------RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARL 365 (481)
T ss_pred --HhhCCCCeeeccCCceeeccc------ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455554433211001111000 111124666777665554443332222233456677778888899999999
Q ss_pred CCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 396 LPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
+++. ++..+ .+....+.|.... . .-...+..++.+.|.+ +||.++.- ..|..
T Consensus 366 ~~~~--~~~~~--~~~~~~~~~~~~~--~-----------~~~g~~~~~v~~~L~~-~Gi~~~~~---~~p~~------- 417 (481)
T PRK04366 366 KDIY--DLPYD--RPCMHEFVLSGKK--L-----------KETGVRTLDIAKRLLD-YGFHPPTI---YFPLI------- 417 (481)
T ss_pred HhhC--cccCC--CCeeEEEEEECcc--c-----------cccCCCHHHHHHHHHH-CCccCCcc---ccccc-------
Confidence 8863 33222 1222222222110 0 0001367889999976 59976511 00100
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
.++.+|++++.++|++|+|+++++|+.+.++...
T Consensus 418 ------------------~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 418 ------------------VPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred ------------------cCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1478999999999999999999999999876553
No 42
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.96 E-value=6.2e-27 Score=228.88 Aligned_cols=379 Identities=19% Similarity=0.234 Sum_probs=281.0
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchh-hHHHHHHHHHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYV-GQHTTNMVHEASNYI 130 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~-~~~~~~~~~e~r~~i 130 (609)
.+.+..+|+.|.-.+ +.||||-++.|..|+.+....++...+.|+.-...+... ...+..+-+.+-.++
T Consensus 16 ~dpl~~lr~~f~lp~----------~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdkl 85 (407)
T COG3844 16 ADPLAKLRDRFALPG----------GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKL 85 (407)
T ss_pred cCchhhhHhhccCCC----------CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHh
Confidence 445677777775433 799999999999997766666666655554433221111 223456677888999
Q ss_pred HHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 131 KKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 131 a~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
+.++|+.++ +++.+ ++++.+++.++.+.- . .++|++ +|+.....+++-..++.- -+++..+..
T Consensus 86 ApLiGA~~~-Evvv~-dtts~nl~k~L~aal-r------------~~~~r~-vIv~E~~~fpTdly~a~g-~~~~~~~~~ 148 (407)
T COG3844 86 APLIGARAG-EVVVT-DTTSINLFKVLAAAL-R------------PQEGRR-VIVSEGDNFPTDLYIAEG-LADLLGIGY 148 (407)
T ss_pred hhhhcCCCC-ceEEe-CCcchHHHHHHHHHh-c------------cCCCce-EEeecCCCCCcchhhhcc-hhhhhcccc
Confidence 999999998 89898 667777777665431 0 245554 555555666665544421 123333333
Q ss_pred CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCcc
Q 038499 211 DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYD 290 (609)
Q Consensus 211 ~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D 290 (609)
+-.+.+.+++++++++ +++.++.+++++.-||.+.|+.+|..++|+||++++||-||++|.+++++... ++|
T Consensus 149 ~~~~~~~P~~~~~~~~-----dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaD 220 (407)
T COG3844 149 DLEGVIAPRALEEAIT-----DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GAD 220 (407)
T ss_pred cceeeeChHHHHHhhc-----cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCC
Confidence 4445678889999998 68999999999999999999999999999999999999999999999999886 999
Q ss_pred EEEEcCCCCC-CCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHH
Q 038499 291 AIFLSTHKFL-GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAAL 367 (609)
Q Consensus 291 ~v~~S~hK~l-ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal 367 (609)
+-+.+.||++ |||+++++|++.++. .+...|...||.. ...+|........-....|+..||+++..+. ..++
T Consensus 221 faigcsyKYLNgGPGapa~l~v~~~h--~e~~~~~lsgW~g--ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aL 296 (407)
T COG3844 221 FAIGCSYKYLNGGPGAPAGLFVAPRH--RERSWPPLSGWWG--HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGAL 296 (407)
T ss_pred eeeeeeceeccCCCCCceeEEecccc--ccccccccccccC--CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhh
Confidence 9999999999 668889999999998 4555555556533 2223333322233345678899999987754 5667
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC-C--ceEEeCCCC-CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChH
Q 038499 368 AFWVKEYIGHEVIKKQEETYIERALERLLPN-Q--NIKILGNTS-TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGP 443 (609)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~-p--~i~v~~~~~-~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 443 (609)
+.+ ..+++.+++++...+.+++.+.+... + ++++..|.+ +.|.+.++|.... ..
T Consensus 297 Dif--a~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~--------------------~~ 354 (407)
T COG3844 297 DIF--ADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH--------------------GY 354 (407)
T ss_pred hhh--hhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc--------------------HH
Confidence 766 56789999999999999999988653 3 688888864 5688899988754 78
Q ss_pred HHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 038499 444 FVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 444 ~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~ 522 (609)
.|++.|.+ .||..- + ..|+.+|+.+ ++|++..|+-..+++|++++
T Consensus 355 ~V~qaLi~-rGVigD--------~-------------------------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL 400 (407)
T COG3844 355 QVMQALID-RGVIGD--------F-------------------------REPDVLRFGFTPLYVSFVDVWDAVDALEEVL 400 (407)
T ss_pred HHHHHHHH-cCcccc--------c-------------------------cCCCeeeecCccceechhHHHHHHHHHHHHH
Confidence 99999976 488532 0 1489999999 79999999999999999998
Q ss_pred Hhc
Q 038499 523 IYG 525 (609)
Q Consensus 523 ~~~ 525 (609)
+.+
T Consensus 401 ~t~ 403 (407)
T COG3844 401 DTL 403 (407)
T ss_pred Hhh
Confidence 754
No 43
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=1.9e-26 Score=244.75 Aligned_cols=344 Identities=18% Similarity=0.163 Sum_probs=233.3
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
+|..+.+.+++.++. ..++|++...+..+........++++.+++++|. + +++++ +|+++++..++..+
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~-~i~~~-~g~t~al~~~l~~~------ 79 (361)
T cd06452 11 GRLTPEARKALIEWG-DGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D-EARVT-PGAREGKFAVMHSL------ 79 (361)
T ss_pred CCCCHHHHHHHHHHh-cccCCccccccccccccCchHHHHHHHHHHHcCC--c-eEEEe-CCHHHHHHHHHHHh------
Confidence 677888888887766 3346654422223333345688999999999999 3 78888 77777888887765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCC--CCCHHHHHHHHhhhcc--CCCceEEEEecc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDG--LLDIEALRSKLELYKD--AKRPILGSFSAC 242 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g--~ld~e~L~~al~~~~~--~~~~~lv~~s~~ 242 (609)
+++|| .|+++..+|++....++..|++++.++.+.++ .+|+++|++++++... .+++++++++++
T Consensus 80 ---------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p 148 (361)
T cd06452 80 ---------CEKGD--WVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHV 148 (361)
T ss_pred ---------cCCCC--EEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECC
Confidence 37888 69999999999988888899999999988654 8999999999863211 136899999999
Q ss_pred cCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 243 SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 243 sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
+|+||.+.|+++|.++||++|+++++|+|++.+..+++...+ +.|++++|+||++++|.++|++++++++ ++.+.
T Consensus 149 ~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~~~--~~~l~ 223 (361)
T cd06452 149 DGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTEEW--ADIVF 223 (361)
T ss_pred CCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECHHH--HHHHh
Confidence 999999999999999999999999999999988777766554 6899999999999988889999999887 33332
Q ss_pred CCccCCCceEeecccccccccccccccccccCCChhHHH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ--MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
......+. . ......+++.... .+.+++.... +. .+. ..+..+.++++.+.|+++|+
T Consensus 224 ~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~~~al~~~~-~~--~~~-~~~~~~~~~~l~~~L~~l~g 282 (361)
T cd06452 224 RTSQMFKI---------K--------EVELLGCTLRGAPLVTLMASFPHVK-ER--VKR-WDEEVEKARWFVAELEKIEG 282 (361)
T ss_pred cccccccc---------c--------eeeeeccccCchHHHHHHHHHHHHH-HH--HHH-HHHHHHHHHHHHHHHhcCCC
Confidence 21100000 0 0001123332211 1223333321 11 222 23334456889999999999
Q ss_pred eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHH
Q 038499 401 IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY 480 (609)
Q Consensus 401 i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~ 480 (609)
+++++... ...+++.+.... -.. ...........+.+.|.+ .||.+. +. +
T Consensus 283 ~~v~~~~~-~~~n~~~~~~~~-~~~--------~~~~~~~~~~~~~~~L~~-~gI~~~----~~--------~------- 332 (361)
T cd06452 283 IKQLGEKP-KNHDLMFFETPS-FDE--------IAKKHKRRGYFLYSELKK-RGIHGI----KP--------G------- 332 (361)
T ss_pred eEEECCCC-CCCceEEEEcCC-cch--------hhhhccccchhHHHHHHH-cCceEE----cC--------C-------
Confidence 99986421 233444444321 000 000000123468888866 499742 00 1
Q ss_pred HHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 481 QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 481 ~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
...++|++.. ..+++|++.++++|+.+.
T Consensus 333 -------------~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 -------------LTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -------------CceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 1358999982 259999999999999764
No 44
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=4e-26 Score=245.51 Aligned_cols=354 Identities=18% Similarity=0.115 Sum_probs=233.1
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchh--hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYV--GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~--~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
++.+.....+..++.++.++.... .. .++...+.. ..+..++++++++++++++|++.+ +++++.+|++++...
T Consensus 22 ~~~l~~g~~~~~~p~~~~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~~~ 97 (398)
T cd00613 22 MSFLGSGTYKHNPPAVIKRNILEN-EF--YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAEAA 97 (398)
T ss_pred cccccccccCCcCcHHHHHHhccc-cC--cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHHHH
Confidence 456655555655555555443333 11 111111111 345668889999999999999765 677775677655444
Q ss_pred HHHHhcccchhhHHHHHHhhhcC--CCceEEEECCCCccchHHHHHHcC----ceEEEEecCCCCCCCHHHHHHHHhhhc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRD--EERWVVFVGPHEHHSNLLSWRQSL----AEVVEIGLDDDGLLDIEALRSKLELYK 229 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~--gd~~~Vlv~~~~h~s~~~~~~~~G----~~vv~v~~~~~g~ld~e~L~~al~~~~ 229 (609)
+..++ +.+ || +|+++..+|+++...|...| ++++.++.++++.+|+++|++++.
T Consensus 98 ~~~~~---------------~~~~~gd--~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--- 157 (398)
T cd00613 98 GLAAI---------------RAYHKRN--KVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS--- 157 (398)
T ss_pred HHHHH---------------hcccCCC--EEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC---
Confidence 43332 244 77 79999999999999998877 999999988778899999999997
Q ss_pred cCCCceEEEEecccCccccccCH-HHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC-----
Q 038499 230 DAKRPILGSFSACSNVTGIYSDT-RSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP----- 303 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl-~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp----- 303 (609)
++++++++++++ +||.+.|+ ++|+++|++||+++|+|++++.+....+.... ++|++++|+|||+ +|
T Consensus 158 --~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~---~~d~~~~s~~K~~-~p~g~Gg 230 (398)
T cd00613 158 --EEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY---GADIVVGNLQKTG-VPHGGGG 230 (398)
T ss_pred --CCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHc---CCCEEEeeccccC-CCCCCCC
Confidence 689999999975 89999985 99999999999999999998766554444333 7899999999998 33
Q ss_pred CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccc----cccccccCCChhH-----HHHHHHHHHHHHHHh
Q 038499 304 GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLE----DIEERESGGTPQV-----IQMIRAALAFWVKEY 374 (609)
Q Consensus 304 ~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~----~~~~r~~~gtp~i-----~~~~~aal~~~~~~~ 374 (609)
.+.|++++++++ ++.+.+...|+..... .....++. ....|++.+++++ .....+...+.....
T Consensus 231 p~~g~l~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~ 303 (398)
T cd00613 231 PGAGFFAVKKEL--VRFLPGRLVGVTKDAE-----GNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGP 303 (398)
T ss_pred CceeEEEEhhhh--HhhCCCCeeccccccC-----CCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCH
Confidence 347899999888 4455444444322100 00000100 0012234455432 222222222222234
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcC
Q 038499 375 IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFG 454 (609)
Q Consensus 375 ~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~G 454 (609)
.|.+++.++.+++++++.++|+++++..+.. ..+.+.+++.+.. .. ..+..++++.|.+ .|
T Consensus 304 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~---~~~~~~v~~~~~~-~~--------------~~~~~~~~~~L~~-~g 364 (398)
T cd00613 304 EGLKEIAERAHLNANYLAKRLKEVGGVLPFN---GPFFHEFVLRLPP-LY--------------GIRAEDLAKALID-GG 364 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCC---CCeeEEEEEEcCC-cc--------------hHHHHHHHHhhhh-cC
Confidence 5778889999999999999999876544221 1344445555432 10 0246788888866 58
Q ss_pred cEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 455 IQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 455 I~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
|.+..- . + . .++.+|+|+++++|++|+|+++++|
T Consensus 365 i~~~~~--------~-~-~--------------------~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPTM--------Y-L-P--------------------VDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccccc--------c-c-C--------------------CCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 865310 0 0 0 2478999999999999999999874
No 45
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.96 E-value=1.6e-25 Score=245.04 Aligned_cols=289 Identities=16% Similarity=0.189 Sum_probs=204.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCCC------------CCcEEEeCChHHHHHHHHHHHhcccchh------hHHHHHHh
Q 038499 113 SYVGQHTTNMVHEASNYIKKCLGGGQ------------EDAMIFCGSGTTAAIKRLQEVMGIAVPS------ILREKLIK 174 (609)
Q Consensus 113 ~~~~~~~~~~~~e~r~~ia~~~g~~~------------~~~vift~sGttaal~~l~~~l~~~~~~------~~~~~~~~ 174 (609)
...+...+.+..++.++++++++..+ ....+||++||.+++..+..+.....+. ...+++.+
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 34566788999999999999986321 1246888788888888877665422110 00011100
Q ss_pred hhc--CCCceEEEECCCCccchHHHHHHcCc---eEEEEecCCCCCCCHHHHHHHHhhhccCCCceE--EEEecccCccc
Q 038499 175 CLR--DEERWVVFVGPHEHHSNLLSWRQSLA---EVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL--GSFSACSNVTG 247 (609)
Q Consensus 175 ~l~--~gd~~~Vlv~~~~h~s~~~~~~~~G~---~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l--v~~s~~sn~TG 247 (609)
.+. ..++.+|+++..+|+|+..+++..|. +++.||++++|.+|+++|+++|++.... +++. |+-++.++.||
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~-g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQ-NIKPLAIVGVAGTTETG 279 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHC-CCCcEEEEEEecCcCCC
Confidence 000 01245899999999999999988888 8999999999999999999999753322 3444 44446688999
Q ss_pred cccCHHHHHHHHHHhCCeEEEeccccCCccccc-----CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVEID-----VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 248 ~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id-----~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
.+.|+++|+++|++||+|+|||+|++++....+ +..+ .++|++++|+|||+++|.|+|++++++... ++.+.
T Consensus 280 aiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~-~~~~~ 356 (522)
T TIGR03799 280 NIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPAL-MSAIE 356 (522)
T ss_pred CcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHH-HHHhc
Confidence 999999999999999999999999998765444 2221 368999999999999999999999986542 23332
Q ss_pred CCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
+.. .|... .....+ ...+.+.+.+...-.+.+++.+. ...|++.+.++..++++++.+.|++.|+++
T Consensus 357 ~~~------~Yl~~--~~~~d~---~~~~legsR~~~al~lw~aL~~l--G~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 357 HHA------EYILR--KGSKDL---GSHTLEGSRPGMAMLVYAGLHII--GRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred cCc------chhcC--CCCCcc---ccceeecCcchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 210 00000 000000 12344555555433345555555 567999999999999999999999999999
Q ss_pred EeCCCCCCCcceEEEEecc
Q 038499 403 ILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~~~~ 421 (609)
++.+ +.+++++|...+
T Consensus 424 l~~~---p~l~iv~Fr~~p 439 (522)
T TIGR03799 424 LVTE---PELCLLTYRYVP 439 (522)
T ss_pred EecC---CCccEEEEEEeC
Confidence 9986 478899999876
No 46
>PLN02880 tyrosine decarboxylase
Probab=99.95 E-value=8.4e-26 Score=246.74 Aligned_cols=403 Identities=11% Similarity=0.084 Sum_probs=256.3
Q ss_pred CcchHHHHHHHHHhhcc-CCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHH
Q 038499 47 SISSSEKKLTWLQSQII-GKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE 125 (609)
Q Consensus 47 ~~~~~~~~~~~~r~~~~-g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e 125 (609)
...+.++.++.+.+.+. +.. ... ..-|+.|-.+++.+..+...+..... |.....+..+...+.+..+
T Consensus 58 ~~~~~~~~l~~~~~~i~~~~~-~~~------hP~f~~~~~~~~~~~~~lad~l~~~~----n~~~~~~~~sp~~~~lE~~ 126 (490)
T PLN02880 58 QPETLDQVLDDVQAKILPGVT-HWQ------SPNYFAYYPSNSSVAGFLGEMLSAGL----NIVGFSWITSPAATELEMI 126 (490)
T ss_pred CCCCHHHHHHHHHHHHhcCCC-CCC------CCCeeEeccCCCcHHHHHHHHHHHhh----ccCCcccccCcccHHHHHH
Confidence 33447788888877653 321 111 12377777667766665554443332 3222223345567889999
Q ss_pred HHHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhh--hcCCCceEEEECCCCccchHHH
Q 038499 126 ASNYIKKCLGGGQE------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKC--LRDEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 126 ~r~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~--l~~gd~~~Vlv~~~~h~s~~~~ 197 (609)
+.+++++++|.+++ ...++|++||.+++..+..+.. +..+. +....+.+|+++...|+|...+
T Consensus 127 vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~---------~~~~~~g~~~~~~~vv~~S~~aH~Sv~Ka 197 (490)
T PLN02880 127 VLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARD---------RVLRKVGKNALEKLVVYASDQTHSALQKA 197 (490)
T ss_pred HHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHH---------HHHHHhcccccCCeEEEEcCCchHHHHHH
Confidence 99999999998753 1367887888888877765543 11110 1111345788999999999999
Q ss_pred HHHcCc---eEEEEecCC--CCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 198 WRQSLA---EVVEIGLDD--DGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 198 ~~~~G~---~vv~v~~~~--~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
++..|+ .++.||.+. ++.+|+++|+++|.+.... ..|.+|+.+.+++.||.+.|+++|+++|++||+|+|||+|
T Consensus 198 a~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA 277 (490)
T PLN02880 198 CQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAA 277 (490)
T ss_pred HHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehh
Confidence 999988 488899875 5789999999999865432 3567899999999999999999999999999999999999
Q ss_pred ccCCcccc-----cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccc
Q 038499 272 ASGPYVEI-----DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLE 346 (609)
Q Consensus 272 ~~~~~~~i-----d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (609)
++++.... .+.. ..++|++++++|||++.|.++|++++++...... +......+.... ........+
T Consensus 278 ~gg~~~~~~~~~~~l~g--ie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~---~~~~~~~Yl~~~---~~~~~~~~~ 349 (490)
T PLN02880 278 YAGSACICPEYRHYIDG--VEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQ---SLSTNPEFLKNK---ASQANSVVD 349 (490)
T ss_pred hHHHHHhCHHHHHHhcC--chhcCEEEECchhhcCCCccEEEEEEeCHHHHHH---HHccCHHHhcCc---cccccCCCC
Confidence 88764432 1221 2468999999999999999999999996431011 111111100000 000000000
Q ss_pred cccccccCCChhHHHHHHHHHHHHH-HHhcCHHHHHHHHH---HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccC
Q 038499 347 DIEERESGGTPQVIQMIRAALAFWV-KEYIGHEVIKKQEE---TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 347 ~~~~r~~~gtp~i~~~~~aal~~~~-~~~~g~~~i~~~~~---~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
......+.|... + ++.+|. .+..|.+.++++.+ ++++++.+.|++.|+++++.+ +.+++++|.+.+
T Consensus 350 ~~~~~i~~~rr~-----~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~---~~~~iv~Fr~~~- 419 (490)
T PLN02880 350 YKDWQIPLGRRF-----R-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP---RIFSLVCFRLVP- 419 (490)
T ss_pred hhccCcCCCCcc-----c-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC---CceEEEEEEEeC-
Confidence 000001111111 1 233332 23456666666666 999999999999999999987 468899999876
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
..... ....--...+.+.|++...+.+..- .+. ...++|+++
T Consensus 420 ~~~~~--------~~~~~~n~~l~~~l~~~g~~~v~~t---------~~~---------------------g~~~lR~~~ 461 (490)
T PLN02880 420 PKNNE--------DNGNKLNHDLLDAVNSSGKIFISHT---------VLS---------------------GKYVLRFAV 461 (490)
T ss_pred CCCCh--------hhHHHHHHHHHHHHHhCCCEEEEEE---------EEC---------------------CEEEEEEEe
Confidence 21000 0000001234455554444444311 111 146899999
Q ss_pred CCCCC-HHHHHHHHHHHHHHHHhc
Q 038499 503 PYYMS-NEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 503 ~~~~t-~eeid~ll~al~~v~~~~ 525 (609)
+.++| ++|++.+++.|.+++++.
T Consensus 462 ~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 462 GAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 65555 699999999999988764
No 47
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=9.9e-26 Score=239.93 Aligned_cols=346 Identities=16% Similarity=0.176 Sum_probs=226.9
Q ss_pred CCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 85 ASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 85 a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
.+|+.+..+.+++.++-. -++..+...+..........+++++.+++++|.++ ++++ +|+++++..++..+
T Consensus 16 ~~g~~~~~~~~a~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~---~~i~-~g~~~a~~~~~~~l---- 86 (370)
T TIGR02539 16 RGGVLTEAARKALVEFGD-GYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE---ARVT-HGAREGKFAVMHAL---- 86 (370)
T ss_pred hCCCCcHHHHHHHHHHhh-ccccccccccccccccchHHHHHHHHHHHHhCCCc---eEEE-CChHHHHHHHHHHh----
Confidence 368888888888877543 11211111111112234467788899999999963 4556 67777888887776
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhcc--CCCceEEEEe
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKD--AKRPILGSFS 240 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~--~~~~~lv~~s 240 (609)
+++|| .|+++..+|++....++..|++++.++.+. ++.+|+++|++++++... ..++++|+++
T Consensus 87 -----------~~~gd--~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~ 153 (370)
T TIGR02539 87 -----------CKEGD--WVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLT 153 (370)
T ss_pred -----------hCCCC--EEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEE
Confidence 37888 699999999999888888999999999863 578999999999964211 1267899999
Q ss_pred cccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC
Q 038499 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS 320 (609)
Q Consensus 241 ~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~ 320 (609)
+++|+||.+.|+++|+++|++||+++++|+||+.+..+++.... +.|+++.|+||++++++++|++++++++ ++.
T Consensus 154 ~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~~~~~--i~~ 228 (370)
T TIGR02539 154 HVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGMSEEW--EDI 228 (370)
T ss_pred CCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECHHH--Hhh
Confidence 99999999999999999999999999999999988666655443 6899999999999976779999999988 444
Q ss_pred CCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC
Q 038499 321 FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
+......+.. .... ...++....... .+++... ....+... +..+.++++.+.|+++
T Consensus 229 l~~~~~~~~~---------~~~~--------~~~~~~~~~~~~~~~~al~~~---~~~l~~~~-~~~~~~~~l~~~L~~~ 287 (370)
T TIGR02539 229 VLRKSRYSPV---------KEVE--------LLGCTSRGAPIVTMMASFPHV---VERVKRWD-EEVKKTRWFVAELEDI 287 (370)
T ss_pred hcccccCCcc---------ceee--------eecccccccHHHHHHHHHHHH---HHHHHHHH-HHHHHHHHHHHHHHhC
Confidence 4322111100 0000 011222111111 1222211 11122222 2333456899999887
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE-eccCcccCChhhhhhcCCChh
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ-ARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~-v~~G~~ca~p~~~~ll~i~~~ 477 (609)
++++++.. ....+++.+.+.. ... . ..+.......+.+.|.+ .||. ++.|
T Consensus 288 -g~~~~~~~-~s~t~~v~~~~~~-~~~-~-------~~~~~~~~~~~~~~L~e-~GI~~ir~~----------------- 338 (370)
T TIGR02539 288 -GFIQLGQK-PKEHDLVKFETPG-FHE-I-------AQKHKRRGYFLYEELKK-RGIHGIRSG----------------- 338 (370)
T ss_pred -CcEEEccC-CCcCceEEEECCc-hhH-H-------hhhhccccHHHHHHHHh-CCCccccCC-----------------
Confidence 78876432 1244555544321 000 0 00000123568888866 5996 5521
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|+++. ..+++|+++++++|+++.++
T Consensus 339 ----------------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 339 ----------------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ----------------cceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 1368999983 46999999999999988764
No 48
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=5.2e-26 Score=261.29 Aligned_cols=356 Identities=19% Similarity=0.127 Sum_probs=246.4
Q ss_pred ccCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH---HHHHHHHHHhcccchhhHHHHHHhhhcC-C
Q 038499 105 YGNTHTCDS-YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTT---AAIKRLQEVMGIAVPSILREKLIKCLRD-E 179 (609)
Q Consensus 105 ~~n~~~~~~-~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtt---aal~~l~~~l~~~~~~~~~~~~~~~l~~-g 179 (609)
+++.|.-.- ....+..+++.++++++++++|+ ++|+|+.+++. .+++.+++.+. ++ |
T Consensus 551 ~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~---~~v~f~pnaga~ge~a~~~vi~~~~---------------~~~G 612 (993)
T PLN02414 551 FANIHPFAPVDQAQGYQEMFEDLGDLLCEITGF---DSFSLQPNAGAAGEYAGLMVIRAYH---------------LSRG 612 (993)
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC---CeEEEcCCCcHHHHHHHHHHHHHHH---------------hccC
Confidence 355554321 12345678899999999999999 38999954441 46777777652 33 4
Q ss_pred C--ceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 180 E--RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 180 d--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
| |.+|+++..+|++|..+|...|++++.|+.+++|.+|+++|+++++.+. +++++|+++++||.+|...|+++|++
T Consensus 613 d~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~--~~ta~V~vt~pSn~gg~e~~I~eI~~ 690 (993)
T PLN02414 613 DHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHK--DNLAALMVTYPSTHGVYEEGIDEICD 690 (993)
T ss_pred CCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccC--CCeEEEEEECCCccccccchHHHHHH
Confidence 4 5689999999999999999999999999999999999999999998321 36899999999999999999999999
Q ss_pred HHHHhCCeEEEeccccCCcc-cccCCCCCCCCccEEEEcCCCCCCCCCC-----cEEEEEechhhccCCCCCCccCCCce
Q 038499 258 LLHQYGGFACFDFAASGPYV-EIDVRSGQTDGYDAIFLSTHKFLGGPGS-----PGILLMTKALYQLGSFPPSTCGGGTV 331 (609)
Q Consensus 258 la~~~g~~vivD~A~~~~~~-~id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~L~~~~~~~~l~~~~p~~~ggg~v 331 (609)
+||++|+++++|+|+..++. ..+...+ |+|++++|.||+|++|.| +|++++++.+ ...+ +|....
T Consensus 691 iah~~Galv~vDgAq~~a~~~l~~p~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L--~p~l----Pg~~v~ 761 (993)
T PLN02414 691 IIHDNGGQVYMDGANMNAQVGLTSPGFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFL----PSHPVV 761 (993)
T ss_pred HHHHcCCEEEEEecCHHhccCcCCcccc---CCCEEEecCCccCCcCcccCCCCeeeEEEchhh--cccC----CCCccc
Confidence 99999999999999988773 3444444 899999999999886654 8999999987 2233 332110
Q ss_pred EeecccccccccccccccccccCCChh---H--HHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHhCCCCceEE
Q 038499 332 NYVNGFNEKDTLYLEDIEERESGGTPQ---V--IQMIRAALAFWVKEYIGHE---VIKKQEETYIERALERLLPNQNIKI 403 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r~~~gtp~---i--~~~~~aal~~~~~~~~g~~---~i~~~~~~l~~~~~~~L~~~p~i~v 403 (609)
. ..+ +... ......||.+ + ...+..++.|+ ...|.+ ...++...+++|+.++|.+..++..
T Consensus 762 ~-~~~-------~~~r-~~~s~iGt~~~a~~g~al~l~~A~~yi--~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~ 830 (993)
T PLN02414 762 P-TGG-------IPRP-EKTQPLGTISAAPWGSALILPISYTYI--AMMGSEGLTDASKIAILNANYMAKRLEGHYPVLF 830 (993)
T ss_pred c-CCC-------cccc-cCCCCcCCccchhhhhHHHHHHHHHHH--HHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 0 000 0000 0111135522 1 12223344443 344555 4488888899999999987545544
Q ss_pred eCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHH
Q 038499 404 LGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIR 483 (609)
Q Consensus 404 ~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~ 483 (609)
.++.+ +...-+.+.+.. -. ...+.+..++.+.|.+ +||....-. + |
T Consensus 831 ~~~~~-~~~hEfv~~~~~-l~-----------~~~g~~~~di~krL~d-~Gihapt~~-~--p----------------- 876 (993)
T PLN02414 831 RGKNG-TCAHEFIIDLRP-FK-----------NTAGIEPEDVAKRLMD-YGFHAPTMS-W--P----------------- 876 (993)
T ss_pred cCCCC-CeeeeEEEeccc-cc-----------cccCCCHHHHHHHHHH-cCcEEeeec-c--c-----------------
Confidence 44321 111112222221 00 1112566899999985 799754211 1 1
Q ss_pred HHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc--------------cccCCCcccccCCceeec
Q 038499 484 SAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ--------------RFLPLYNFNIKTGTWCFM 544 (609)
Q Consensus 484 ~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~--------------~~~p~y~~~~~~~~w~~~ 544 (609)
.++.+||+++.++|++|+|+++++|..+..+.. +..|.-..+...++|.|.
T Consensus 877 ----------v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~ 941 (993)
T PLN02414 877 ----------VPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKADRENNVLKGAPHPPSLLMADKWDKP 941 (993)
T ss_pred ----------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhcCCCChHHhhcCCCCCC
Confidence 158899999999999999999999998886654 355777777766789887
No 49
>PLN02590 probable tyrosine decarboxylase
Probab=99.95 E-value=4.6e-25 Score=240.99 Aligned_cols=414 Identities=12% Similarity=0.060 Sum_probs=264.9
Q ss_pred CCCCCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHH
Q 038499 43 SVPKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNM 122 (609)
Q Consensus 43 ~~~r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~ 122 (609)
++|...++.++.++.+++.+.-...... ..-|+.|-.+++.+..++..+..... |+.......+...+++
T Consensus 102 ~~P~~g~~~~~il~~~~~~i~p~~~~~~------hP~f~a~~~~~~~~~~~lgd~l~sa~----n~~~~~~~~sPa~t~l 171 (539)
T PLN02590 102 SAPERPESLKELLDDVSKKIMPGITHWQ------SPSYFAYYASSTSVAGFLGEMLNAGL----SVVGFTWLTSPAATEL 171 (539)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCcCC------CCCeeEeccCCCcHHHHHHHHHHHhc----ccccCCcccCchhHHH
Confidence 4445556678888888776642111112 22377777777777766554444332 3333233456678899
Q ss_pred HHHHHHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhh--cCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCLGGGQE------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCL--RDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l--~~gd~~~Vlv~~~~h~s~ 194 (609)
..++.+++++++|.++. ...+|+++||.+++..+..+.. +..+.. ..-.+.+|+++...|+|.
T Consensus 172 E~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~---------~~~~~~g~~~~~~~vvy~S~~aH~Sv 242 (539)
T PLN02590 172 EIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARD---------RILKKVGKTLLPQLVVYGSDQTHSSF 242 (539)
T ss_pred HHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHH---------HHHhhhcccCCCCEEEEecCCchHHH
Confidence 99999999999998752 2467887788877776655432 211111 111234788999999999
Q ss_pred HHHHHHcCc---eEEEEecCC--CCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhCCeEEE
Q 038499 195 LLSWRQSLA---EVVEIGLDD--DGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 195 ~~~~~~~G~---~vv~v~~~~--~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv 268 (609)
..+++..|+ .++.||++. ++.+|+++|+++|.++...+ .|.+|+.+..++.||.+.|+++|+++|++||+|+||
T Consensus 243 ~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHV 322 (539)
T PLN02590 243 RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHV 322 (539)
T ss_pred HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEE
Confidence 999999887 589999884 57999999999998654322 567999999999999999999999999999999999
Q ss_pred eccccCCccccc-CCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC--CCCccCCCceEeeccccccccc
Q 038499 269 DFAASGPYVEID-VRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF--PPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 269 D~A~~~~~~~id-~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
|+|+++.....+ .+.. ....+|.+++++|||++.|.++|++++++.....+.+ .+.+..... . ....
T Consensus 323 DaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~-------~-~~~~ 394 (539)
T PLN02590 323 DAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKV-------S-KKDT 394 (539)
T ss_pred ecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcc-------c-cccc
Confidence 999877543221 1111 1246799999999999999999999999753101111 111110000 0 0000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
..+......+.+.+.-...+.+.+... ...|+..+.++..++++++.+.|++.|+++++.+ +.+++++|...+ .
T Consensus 395 ~~d~~d~~i~lsRr~raLklW~~lr~~--G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~---~~l~iVcFr~~~-~ 468 (539)
T PLN02590 395 VVNYKDWQISLSRRFRSLKLWMVLRLY--GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT---RYFSLVCFRLAP-V 468 (539)
T ss_pred CCCccccCCCCCCchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC---CceEEEEEEecC-C
Confidence 000001111122221111222232222 3457778888899999999999999999999986 578999999876 2
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF- 502 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~- 502 (609)
.... ...--....+.+.|++. |...- + + ..+. ..-++|+++
T Consensus 469 ~~~~--------~~~~~ln~~l~~~l~~~-G~~~v-----s-~--t~~~---------------------g~~~lR~~i~ 510 (539)
T PLN02590 469 DGDE--------DQCNERNRELLAAVNST-GKIFI-----S-H--TALS---------------------GKFVLRFAVG 510 (539)
T ss_pred CCCH--------HHHHHHHHHHHHHHHhC-CCEEE-----E-e--eEEC---------------------CEEEEEEEec
Confidence 2000 00000022344444432 33222 1 1 1111 135899998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 503 PYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 503 ~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
++.+++++++.+++.|.+.+.+.-+
T Consensus 511 n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 511 APLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 7888899999999999998776543
No 50
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=6.7e-26 Score=247.43 Aligned_cols=322 Identities=18% Similarity=0.158 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 117 QHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 117 ~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
.+..+...+.++++++++|++.+ +++++ +|+++++..++.++. +.+|+ .|+++..+|+++..
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~-~v~~~-~g~t~~~~~~~~a~~--------------~~~g~--~Vlv~~~~~~~~~~ 169 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA-NASMY-DGATALAEAALMAVR--------------ITKRK--KVLVSGAVHPEYRE 169 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc-eEEec-CcHHHHHHHHHHHHH--------------hcCCC--EEEEeCccCHHHHH
Confidence 34566777888899999999876 78888 677778877766552 25677 69999999999998
Q ss_pred HHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEE--ec
Q 038499 197 SWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF--DF 270 (609)
Q Consensus 197 ~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv--D~ 270 (609)
.++. .|++++.++.+++ .+|+++|+++++ +++++++++++ |+||.+.|+++|+++||++|+++++ |.
T Consensus 170 ~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-----~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~ 242 (447)
T PRK00451 170 VLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-----DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDP 242 (447)
T ss_pred HHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-----CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcCh
Confidence 8765 5999999999877 899999999997 68999999998 8999999999999999999999998 64
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCC-----CCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKF-----LGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
. +.+..... .. .++|++++|.||| +||| |+|++++++++ ++.+++...|+.. ..............
T Consensus 243 ~-~~g~~~~~-~~---~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~--~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 313 (447)
T PRK00451 243 V-SLGLLKPP-GE---YGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL--VRQMPGRLVGETV-DADGKRGFVLTLQA 313 (447)
T ss_pred H-HhccCCCc-cc---CCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH--HhhCCCCEeeeec-ccCCCeeeEeeccc
Confidence 4 33333221 22 2889999999997 7778 58999999988 5566655555421 10000000000001
Q ss_pred ccccccccCCChhH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec
Q 038499 346 EDIEERESGGTPQV-----IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 346 ~~~~~r~~~gtp~i-----~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~ 420 (609)
.....+.+.+++++ ++.+.++..+......|.+.+.++..++++++.++|+++++++++.. +.+.+...
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~------~~~~~~~v 387 (447)
T PRK00451 314 REQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDG------PFFNEFVV 387 (447)
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCC------CeEEEEEE
Confidence 11112333444433 22223332222124467899999999999999999999989988732 22222111
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.-+ .+..++++.|.+ .||.+.. +..+. | + .++++|
T Consensus 388 ~~~----------------~~~~~~~~~L~~-~gi~~~~~~~~~~-~------~--------------------~~~~~r 423 (447)
T PRK00451 388 RLP----------------KPAEEVNEALLE-KGILGGYDLGRYY-P------E--------------------LGNHLL 423 (447)
T ss_pred ecC----------------CCHHHHHHHHHh-cCCCCCccccccc-C------C--------------------cCCEEE
Confidence 100 246789999966 4776421 11110 0 1 136899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~ 522 (609)
+++++++|++|+++++++|++++
T Consensus 424 vs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 424 VCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EecCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 51
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=237.90 Aligned_cols=330 Identities=18% Similarity=0.159 Sum_probs=221.7
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCcc-CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYG-NTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~-n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
|||++++.+..+.+.+++.+....+-. .+|...+..-.+..+.++++++.+++++|++. .++|+ +|+++++. ++.
T Consensus 14 YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~-sG~~a~~~-~~~ 89 (370)
T PRK05937 14 FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVP-SGYMANLG-LCA 89 (370)
T ss_pred ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEEC-ChHHHHHH-HHH
Confidence 999999988888888888776543300 12222222222377899999999999999952 57776 88876553 333
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC-CCceEE
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA-KRPILG 237 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~~~lv 237 (609)
.+. +++| .|+++..+|.++..+++......+.++ ..|+++|+++|+..... +.++++
T Consensus 90 ~~~---------------~~~d--~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v 147 (370)
T PRK05937 90 HLS---------------SVTD--YVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFI 147 (370)
T ss_pred HhC---------------CCCC--EEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEE
Confidence 221 4566 788889999999999987544433343 46899999999743211 245688
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCC----CCCCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVR----SGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~----~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
++++++|++|.+.|+++|.++|+++|+++++|+||+.|..+.+.. .+...+.++++.|++|++| |.|.|+++.++
T Consensus 148 ~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g-~~G~~vl~~~~ 226 (370)
T PRK05937 148 FVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGAALLSSSE 226 (370)
T ss_pred EEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh-cCceEEEcCHH
Confidence 899999999999999999999999999999999999988777653 1211233467788999997 66677766543
Q ss_pred hhhccC-CCCCCccCCCceEeecccccccccccccccccccCCChh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 314 ALYQLG-SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ-VIQMIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 314 ~~~~l~-~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~-i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
....+. ...| .++..+.++ ....+.++++++ +..+ +.++++.+++++++
T Consensus 227 ~~~~~~~~~~~--------------------------~~~s~~~~~~~~~a~~aal~~l--~~~~-~~~~~~l~~l~~~l 277 (370)
T PRK05937 227 VKQDLMLNSPP--------------------------LRYSTGLPPHLLISIQVAYDFL--SQEG-ELARKQLFRLKEYF 277 (370)
T ss_pred HHHHHHHhCCC--------------------------CeecCCCCHHHHHHHHHHHHHH--HhCc-HHHHHHHHHHHHHH
Confidence 221011 1111 122233322 222334555554 3345 55678888899999
Q ss_pred HHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 392 LERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
.+.|.... + .++..+.+.. .+...+.+.|.+ .||.++. .|. |
T Consensus 278 ~~~l~~~~------~-----~~~~~i~~~~------------------~~~~~~~~~L~~-~gi~v~~--~~~-~----- 319 (370)
T PRK05937 278 AQKFSSAA------P-----GCVQPIFLPG------------------ISEQELYSKLVE-TGIRVGV--VCF-P----- 319 (370)
T ss_pred HHhcCCCC------C-----CCEEEEEeCC------------------hhHHHHHHHHHH-CCeeEEe--eCC-C-----
Confidence 88876421 1 0122233333 245678888854 6998863 333 1
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+++|+|+++++|++|+++++++|++++++.
T Consensus 320 ----------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 320 ----------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred ----------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 13689999999999999999999999988654
No 52
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=3.4e-25 Score=235.84 Aligned_cols=344 Identities=15% Similarity=0.091 Sum_probs=242.8
Q ss_pred ceEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
.++.|.-... -+.|..+.+++.+.+..- +. .|....+..++++.+.+++.+..| .+++++|++| +|+++++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~--~~---~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt-~Ga~~al 102 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEG--GT---HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVT-AGAKEAL 102 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcc--cC---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEe-CCHHHHH
Confidence 3455544433 467888999988877642 11 122334456666777777777766 3455459998 8999999
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC---CCCCCCHHHHHHHHhhhcc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD---DDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~---~~g~ld~e~L~~al~~~~~ 230 (609)
..++.++ +.||| +|+++.+.|+++....+..|++++.++++ .++.+|+++|+++++
T Consensus 103 ~~~~~a~---------------~~pGD--eVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---- 161 (393)
T COG0436 103 FLAFLAL---------------LNPGD--EVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---- 161 (393)
T ss_pred HHHHHHh---------------cCCCC--EEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC----
Confidence 9888877 58999 69999999999999999999999999975 368999999999999
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC-c---ccccCCCCCC-CCccEEEEcCCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-Y---VEIDVRSGQT-DGYDAIFLSTHKFLGG 302 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~---~~id~~~~~~-~~~D~v~~S~hK~lgg 302 (609)
++||++++++|+||||.+.+ +++|+++|++||++++.|+++..- + .+..+.+... ...-+.+.|++|.++-
T Consensus 162 -~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 162 -PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred -ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc
Confidence 68999999999999999987 677999999999999999996531 1 1121211111 1234666799999984
Q ss_pred CC-CcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh---cCH
Q 038499 303 PG-SPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY---IGH 377 (609)
Q Consensus 303 p~-g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~---~g~ 377 (609)
++ .+||++++ +++. +.+... ......+.+.+.|.+. .+.+ ... ...
T Consensus 241 tGwRvG~~v~~~~~l~--~~~~~~------------------------~~~~~~~~~~~~Q~aa--~~aL-~~~~~~~~~ 291 (393)
T COG0436 241 TGWRIGWVVGPPEELI--AALRKL------------------------KSYLTSCAPTPAQYAA--IAAL-NGPQSDEVV 291 (393)
T ss_pred cccceeEeecChHHHH--HHHHHH------------------------HHhcccCCCHHHHHHH--HHHh-cCccchHHH
Confidence 32 49999999 6552 222100 1222235555555322 2222 111 234
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 378 EVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 378 ~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
+.+++..++.++.+.+.|.+++|+.+..+ +....+.|.-.+ .. .+..+++..|+++.||.+
T Consensus 292 ~~~~~~~~~rrd~l~~~l~~~~g~~~~~~---p~Ga~Y~~~~i~-~~---------------~d~~~f~~~Ll~~~gV~v 352 (393)
T COG0436 292 EEMREEYRERRDLLVEALNEIGGLSVVKP---PEGAFYLFPKIP-EL---------------LDSEEFAKKLLEEAGVAV 352 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeccC---CCeeEEEEeecC-CC---------------CCHHHHHHHHHHhCCEEE
Confidence 55667788899999999999988998873 234555555444 11 467889999999999999
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+|..|..+. ..+++|||+. .+.++++..++.|+.....
T Consensus 353 ~PG~~Fg~~~--------------------------g~~~vRis~~--~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 353 VPGSGFGEPP--------------------------GEGYVRLSLA--TSEETLEEALRRLARFLAE 391 (393)
T ss_pred ecccccCCCC--------------------------CCCeEEEEEe--cCHHHHHHHHHHHHHHHHh
Confidence 9998776321 1489999997 4568888888888887654
No 53
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8.3e-25 Score=234.47 Aligned_cols=344 Identities=13% Similarity=0.023 Sum_probs=232.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG--QEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~--~~~~vift~sGttaal 153 (609)
+.++|+.+... +.++.+.+++.+.+.. +....|....+...+++.+++.+++.+|.+ +.++|++| +|++.++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t-~G~~~~l 102 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN----PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVT-AGSNMAF 102 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEe-CChHHHH
Confidence 45677766554 4677888888776542 211112233345677888999999998974 23478888 7888888
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
..++..+ +++|| .|+++.+.|..+...++..|++++.++.+.++.+|+++|+++++ ++
T Consensus 103 ~~~~~~~---------------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~ 160 (389)
T PRK05957 103 MNAILAI---------------TDPGD--EIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-----PK 160 (389)
T ss_pred HHHHHHh---------------cCCCC--EEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-----cC
Confidence 8777665 37888 69998888888877788899999999998778899999999997 68
Q ss_pred ceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc-cc---ccCCCC-CCCCccEEEEcCCCCCCCCC-
Q 038499 234 PILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY-VE---IDVRSG-QTDGYDAIFLSTHKFLGGPG- 304 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~-~~---id~~~~-~~~~~D~v~~S~hK~lggp~- 304 (609)
++++++++++||||.+.| +++|+++|++||+++++|+++.... .. ..+... ......+++.|++|.+|.|+
T Consensus 161 ~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 240 (389)
T PRK05957 161 TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW 240 (389)
T ss_pred ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc
Confidence 999999999999999998 7889999999999999999965211 10 111111 11123577889999997453
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQ 383 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~ 383 (609)
.+|++++++++ ++.+... ......+++...+.+. ..++ ++ ....+...++
T Consensus 241 RiG~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l-~~~~~~~~~~~~~ 291 (389)
T PRK05957 241 RIGYMVIPIHL--LEAIKKI------------------------QDTILICPPVVSQYAA--LGAL-QVGKSYCQQHLPE 291 (389)
T ss_pred eeEEEecCHHH--HHHHHHH------------------------HhhcccCCCcHHHHHH--HHHH-hCChHHHHHHHHH
Confidence 49999998887 3333211 0001122333333321 1222 11 1123445556
Q ss_pred HHHHHHHHHHHhCCCCce-EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 384 EETYIERALERLLPNQNI-KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
.++.++.+.+.|+.++++ .+..+ ..+.+.+.-.+ .. ++..++++.|.+++||.+++|..
T Consensus 292 ~~~~r~~l~~~L~~~~~~~~~~~~----~gg~~~~~~~~-~~---------------~~~~~~~~~l~~~~gv~v~pg~~ 351 (389)
T PRK05957 292 IAQVRQILLKSLGQLQDRCTLHPA----NGAFYCFLKVN-TD---------------LNDFELVKQLIREYRVAVIPGTT 351 (389)
T ss_pred HHHHHHHHHHHHHhcCCCccccCC----CeeEEEEEeCC-CC---------------CChHHHHHHHHHHCCEEEccchh
Confidence 677788888889877664 43332 33444444333 11 46778889887768999999876
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|..+ .++|+|||++. .++++++..++.|.+.++.
T Consensus 352 f~~~---------------------------~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 352 FGMK---------------------------NGCYLRIAYGA-LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred hCCC---------------------------CCCEEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 6411 14799999975 3677777777777766543
No 54
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.1e-24 Score=232.39 Aligned_cols=364 Identities=14% Similarity=0.062 Sum_probs=240.9
Q ss_pred HHHHhhccCCCccccC-CCCCCceEEecCCCCC--CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHH
Q 038499 56 TWLQSQIIGKNAEFDS-PFGKRRLTYADHTASG--RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKK 132 (609)
Q Consensus 56 ~~~r~~~~g~~~~~~~-p~g~~~~vyld~~a~g--~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~ 132 (609)
.++|+.-.|..+.+.+ |.. .+.++|+.+... +.++.+.+++.+.+... +...|....+...+++.+.+++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~LR~aia~~l~~ 93 (405)
T PRK06207 19 QEVRQSAAGLEALLRGEPLP-GRPVDFSHGDVDAHEPTPGAFELFSAGVERG----GVQAYTEYRGDADIRELLAARLAA 93 (405)
T ss_pred HHHHhhhhhhhhhhcCCcCC-CCceecCCcCCCCCCCCHHHHHHHHHHHhcC----CCccCCCCCCCHHHHHHHHHHHHH
Confidence 4556655555555543 333 356788876544 34567777777765421 111121122345666777777777
Q ss_pred HhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 133 CLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 133 ~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.+|. +++++|++| +|+++++..++..+ +++|| .|++..+.|+.+...++..|++++.|++
T Consensus 94 ~~g~~~~~~~~I~it-~Ga~~al~~~~~~l---------------~~~Gd--~Vlv~~P~y~~~~~~~~~~g~~v~~v~~ 155 (405)
T PRK06207 94 FTGAPVDAADELIIT-PGTQGALFLAVAAT---------------VARGD--KVAIVQPDYFANRKLVEFFEGEMVPVQL 155 (405)
T ss_pred HhCCCCCCCCCEEEe-CCcHHHHHHHHHHh---------------cCCCC--EEEEeCCCchhHHHHHHHcCCEEEEEec
Confidence 7785 442489998 88999999888876 47899 6999999999988888899999999987
Q ss_pred C-----CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----cc
Q 038499 211 D-----DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VE 278 (609)
Q Consensus 211 ~-----~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~ 278 (609)
+ .++.+|+++|+++++ ++++++++++|+||||.+.+ +++|+++|++||+++|+|++++.-. ..
T Consensus 156 ~~~~~~~~~~~d~~~l~~~~~-----~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 230 (405)
T PRK06207 156 DYLSADKRAGLDLDQLEEAFK-----AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSY 230 (405)
T ss_pred cccCcccCCCcCHHHHHHhhh-----hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 6 246799999999997 57899999999999999998 6678889999999999999976421 11
Q ss_pred ccCCCCCC-CCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 279 IDVRSGQT-DGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 279 id~~~~~~-~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
..+..+.. ...-+++.|++|.++-| ..+|+++.++++ ++.+... ......+.
T Consensus 231 ~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l--~~~~~~~------------------------~~~~~~~~ 284 (405)
T PRK06207 231 THLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAI--IDRMEKL------------------------QAIVSLRA 284 (405)
T ss_pred CchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHH--HHHHHHH------------------------HhHhccCC
Confidence 11211110 12237788999999844 349999998877 3332111 00011122
Q ss_pred hhHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 357 PQVIQMIRAALAFWVKEY-IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~-~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
+.+.+. ++..++.+. ...+...++.++.++.+.+.|+.++++.+..+ ..+++.|...+ ..
T Consensus 285 ~~~~q~---a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~fl~~~l~-~~----------- 345 (405)
T PRK06207 285 AGYSQA---VLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP----QAGSYLFPRLP-RL----------- 345 (405)
T ss_pred CHHHHH---HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CeeEEEEEeCc-cc-----------
Confidence 222222 222222221 11344455666678888888988777776644 33555555544 21
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
..+..++++.|.+++||.+++|..|..+ .++++||+++. +.++++..+
T Consensus 346 ---~~~~~~~~~~l~~~~gV~v~pG~~F~~~---------------------------~~~~~Ris~~~--~~~~l~~al 393 (405)
T PRK06207 346 ---AVSLHDFVKILRLQAGVIVTPGTEFSPH---------------------------TADSIRLNFSQ--DHAAAVAAA 393 (405)
T ss_pred ---CCCHHHHHHHHHHhcCEEEeCchHhCCC---------------------------CCCeEEEEecC--CHHHHHHHH
Confidence 0356778888876679999998765411 25899999984 688888888
Q ss_pred HHHHHHHHh
Q 038499 516 EALEFIAIY 524 (609)
Q Consensus 516 ~al~~v~~~ 524 (609)
+.|..+++.
T Consensus 394 ~rl~~~l~~ 402 (405)
T PRK06207 394 ERIAQLIER 402 (405)
T ss_pred HHHHHHHHH
Confidence 888877654
No 55
>PLN02263 serine decarboxylase
Probab=99.94 E-value=5.3e-24 Score=227.00 Aligned_cols=383 Identities=13% Similarity=0.104 Sum_probs=257.0
Q ss_pred ccccccccccccCCCCCCCCccccCCCCCCCCCcchHHHHHHHHHhhcc-CCCccccCCCCCCceEEecCCCCCCC-hHH
Q 038499 15 SCKKTCSSEFENEQPHHHSESFGAQDMGSVPKSISSSEKKLTWLQSQII-GKNAEFDSPFGKRRLTYADHTASGRS-LRY 92 (609)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~r~~~~-g~~~~~~~p~g~~~~vyld~~a~g~~-~~~ 92 (609)
-+.+++.++|....|..+.|. +-+|... +++.++.+++.+. +... ++.|..+.-. +..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~l~~~~~~~~~~~~~------------~~gYp~n~~~d~s~ 106 (470)
T PLN02263 47 LGRNVHTTCLAVTEPEADDEF-------TGDKEAY-MASVLARYRKTLVERTKH------------HLGYPYNLDFDYGA 106 (470)
T ss_pred eecccccccccccCCCCchhh-------hhcchhh-HHHHHHHHHHHHHhcccc------------eeCCCCcccCChhh
Confidence 356778888887777765553 3444444 6777777777764 3322 3333222212 223
Q ss_pred HHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccchhhHHHH
Q 038499 93 IENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVPSILREK 171 (609)
Q Consensus 93 v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~~~~~ 171 (609)
+.+.+ .....-.++|... +..+..+.++..++.+++++++|.+++ ...++|++||.+++..+..+..
T Consensus 107 l~~~l-~~~~nN~Gdp~~~-s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe---------- 174 (470)
T PLN02263 107 LGQLQ-HFSINNLGDPFIE-SNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGRE---------- 174 (470)
T ss_pred HHHHH-HhhccCCCCcccc-CCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHh----------
Confidence 33333 3333333555443 223446889999999999999999763 2467887788888877765532
Q ss_pred HHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC
Q 038499 172 LIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD 251 (609)
Q Consensus 172 ~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d 251 (609)
..+.. +|+++...|+|...+++..|++++.||.+++|.+|+++|+++|.++. .+|.+|+.+.+++++|.+.|
T Consensus 175 ----~~~~~--vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~--~~P~iVvataGTT~~GAiDp 246 (470)
T PLN02263 175 ----VFPDG--ILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANK--DKPAIINVNIGTTVKGAVDD 246 (470)
T ss_pred ----hcCCc--EEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCC--CCcEEEEEEecCCCCcCCCC
Confidence 12222 79999999999999999999999999999999999999999997532 34778899999999999999
Q ss_pred HHHHHHHHHHhCC-----eEEEeccccCCccccc-CC-CCC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC
Q 038499 252 TRSIARLLHQYGG-----FACFDFAASGPYVEID-VR-SGQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP 323 (609)
Q Consensus 252 l~~I~~la~~~g~-----~vivD~A~~~~~~~id-~~-~~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p 323 (609)
+++|+++|++||+ |+|||+|.++...+.- .. .+. ...+|.++.++|||++.|.++|++++++.. ++.+..
T Consensus 247 i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~ 324 (470)
T PLN02263 247 LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSS 324 (470)
T ss_pred HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhh--Hhhhcc
Confidence 9999999999997 9999999876554321 10 111 124899999999999999999999999876 222210
Q ss_pred CccCCCceEeecccccccccccccccccccCCChhH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 324 STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV--IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i--~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
...|+...... -.|+.+. ...+.+.+... ...|+..+.++..++++++.++|+++ ++
T Consensus 325 -----------------~~~Yl~~~d~t-i~gSR~g~~al~lW~~L~~~--G~~G~~~~i~~~~~~A~~l~~~l~~~-g~ 383 (470)
T PLN02263 325 -----------------NVEYLASRDAT-IMGSRNGHAPIFLWYTLNRK--GYRGFQKEVQKCLRNAHYLKDRLREA-GI 383 (470)
T ss_pred -----------------ChHhhCCCCCC-cCCCCCcHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 11122111111 1233221 11122222222 33467777888888999999999988 67
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHH
Q 038499 402 KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 402 ~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~ 481 (609)
.++.+ +.+.+++|.... ... . . .|.++..
T Consensus 384 ~~~~~---p~s~~V~f~~p~---------------------~~~---~-~-~gW~L~~---------------------- 412 (470)
T PLN02263 384 SAMLN---ELSSTVVFERPK---------------------DEE---F-V-RRWQLAC---------------------- 412 (470)
T ss_pred eEEeC---CCceEEEEecCc---------------------hHH---h-h-cceEEcc----------------------
Confidence 66654 345666665332 111 1 1 2555441
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.+..++|.+.+..+.+.+|.|++.|++...
T Consensus 413 ------------~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 413 ------------QGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred ------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 135689999887899999999999988765
No 56
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=8.7e-25 Score=234.73 Aligned_cols=327 Identities=17% Similarity=0.145 Sum_probs=223.1
Q ss_pred hHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 90 LRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
++.+.+++.+.+..+ ++++.+. +..| ......++++.+++++|.+ +.++++ +|+ .+++.++.++
T Consensus 54 ~~~v~~~~~~~~~~~~~~~~~s~-~~~G--~~~~~~~le~~ia~~~g~~--~~ii~~-~~~-~a~~~~~~~l-------- 118 (393)
T TIGR01822 54 HPDLIQAAKDALDEHGFGMSSVR-FICG--TQDIHKELEAKIAAFLGTE--DTILYA-SCF-DANGGLFETL-------- 118 (393)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcC-cccC--ChHHHHHHHHHHHHHhCCC--cEEEEC-chH-HHHHHHHHHh--------
Confidence 567888888877653 4444432 2223 3667789999999999984 245553 555 5677666655
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc-CCCceEEEEecccCccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD-AKRPILGSFSACSNVTG 247 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG 247 (609)
+++|| +|++++.+|+++...++..+++.+.++ .+|+++|++++++... ..+++++++++++|+||
T Consensus 119 -------~~~gd--~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG 184 (393)
T TIGR01822 119 -------LGAED--AIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDG 184 (393)
T ss_pred -------CCCCC--EEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCC
Confidence 47898 799999999999988888887775553 3699999999974211 12788999999999999
Q ss_pred cccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC----CC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS----GQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 248 ~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~----~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
.+.|+++|+++|++||+++++|++|+.+........ .. ..++|++++|+||+++|+. .|++++++++ ++.+.
T Consensus 185 ~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r-~G~~~~~~~~--~~~l~ 261 (393)
T TIGR01822 185 VIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGAS-GGFTTARKEV--VELLR 261 (393)
T ss_pred CcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCC-cEEEEeCHHH--HHHHH
Confidence 999999999999999999999999977654322110 00 1257999999999999775 5999998877 33221
Q ss_pred CCccCCCceEeecccccccccccccccccccCCChhHH--HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI--QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~--~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
+... .... .++.+.. ....+++.+. + ..+.+.++.+++++++.+.|.+. +
T Consensus 262 ~~~~----------------------~~~~-~~~~~~~~~~a~~~al~~~--~--~~~~~~~~~~~~~~~l~~~L~~~-g 313 (393)
T TIGR01822 262 QRSR----------------------PYLF-SNSLPPAVVGASIKVLEML--E--ASNELRDRLWANTRYFRERMEAA-G 313 (393)
T ss_pred HhCc----------------------ccee-cCCCCHHHHHHHHHHHHHH--h--cCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 1100 0001 1222222 2223333332 1 34667788899999999999775 7
Q ss_pred eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHH
Q 038499 401 IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY 480 (609)
Q Consensus 401 i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~ 480 (609)
+.+..+ ..+++.+...+ . .....+++.|.++ ||.+. +..+ |... -
T Consensus 314 ~~~~~~----~~~~~~i~~~~-~----------------~~~~~l~~~L~~~-gI~v~-~~~~--~~~~----~------ 358 (393)
T TIGR01822 314 FDIKPA----DHPIIPVMLYD-A----------------VLAQRFARRLLEE-GIYVT-GFFY--PVVP----K------ 358 (393)
T ss_pred CCCCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHHC-CeeEe-eeCC--CCCC----C------
Confidence 766533 23455544432 1 2356788888765 99987 3222 1000 0
Q ss_pred HHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 481 QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 481 ~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
....+|+++++++|++|+++++++|+++.+.
T Consensus 359 -------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 359 -------------GQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred -------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1257999999999999999999999998754
No 57
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.1e-24 Score=230.85 Aligned_cols=337 Identities=17% Similarity=0.083 Sum_probs=228.9
Q ss_pred eEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~ 154 (609)
.+.|+.+.. -+.++.+.+++.+.+... .. .|....+..++++.+.+++.+.+| .+++ +|+++ +|+++++.
T Consensus 26 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-~i~~t-~g~~~al~ 98 (382)
T PRK06108 26 VLPLWFGESDLPTPDFIRDAAAAALADG----ET-FYTHNLGIPELREALARYVSRLHGVATPPE-RIAVT-SSGVQALM 98 (382)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-eEEEe-CChHHHHH
Confidence 444443332 244677888887766431 11 122222344556666666666667 5565 88888 78888888
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC---CCCCCHHHHHHHHhhhccC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD---DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~---~g~ld~e~L~~al~~~~~~ 231 (609)
.++..+ +++|| .|++..+.|+.+...++..|++++.++.+. ++.+|+++|+++++
T Consensus 99 ~~~~~l---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~----- 156 (382)
T PRK06108 99 LAAQAL---------------VGPGD--EVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT----- 156 (382)
T ss_pred HHHHHh---------------cCCCC--EEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-----
Confidence 887766 37888 688899999988888899999999999874 34689999999887
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc--------ccCCCCCCCCccEEEEcCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE--------IDVRSGQTDGYDAIFLSTHKFL 300 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~--------id~~~~~~~~~D~v~~S~hK~l 300 (609)
++++++++++++||||.+.+ +++|+++|+++|+++|+|++++..... .++.. .....+++.|++|.+
T Consensus 157 ~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 234 (382)
T PRK06108 157 PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE--PDDRIIFVNSFSKNW 234 (382)
T ss_pred ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC--CcCCEEEEeechhhc
Confidence 57899999999999999986 577899999999999999996643211 11111 113457888999998
Q ss_pred CCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHH
Q 038499 301 GGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHE 378 (609)
Q Consensus 301 ggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~ 378 (609)
|.| .++|++++++++ ++.+.... .....+.+.+.+. ++...+ .+ ....+
T Consensus 235 g~~G~RiG~~~~~~~~--~~~~~~~~------------------------~~~~~~~~~~~q~--a~~~~l-~~~~~~~~ 285 (382)
T PRK06108 235 AMTGWRLGWLVAPPAL--GQVLEKLI------------------------EYNTSCVAQFVQR--AAVAAL-DEGEDFVA 285 (382)
T ss_pred cCcccceeeeeCCHHH--HHHHHHHH------------------------HhcccCCChHHHH--HHHHHH-hCChHHHH
Confidence 744 358999999887 33332110 0001223333332 222222 11 12245
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 379 VIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 379 ~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
.+.++.++.++++.+.|++++++++..+ ..+++.|...+ .. .+..++++.|.+++||.++
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~~~~~~l~-~~---------------~~~~~~~~~ll~~~gV~v~ 345 (382)
T PRK06108 286 ELVARLRRSRDHLVDALRALPGVEVAKP----DGAMYAFFRIP-GV---------------TDSLALAKRLVDEAGLGLA 345 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeEEEEEeCC-CC---------------CCHHHHHHHHHHhCCEEEe
Confidence 6778888889999999988888887654 33555554443 11 3567788887676899999
Q ss_pred cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 459 GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 459 ~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+|..|. +. .++++|||++. ++++++..++.|+++++
T Consensus 346 pg~~f~-~~--------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 346 PGTAFG-PG--------------------------GEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CchhhC-CC--------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 887553 11 24899999996 89999999999987654
No 58
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=6.9e-25 Score=231.41 Aligned_cols=324 Identities=18% Similarity=0.174 Sum_probs=224.8
Q ss_pred CCCCceEEecCCC-CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 73 FGKRRLTYADHTA-SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 73 ~g~~~~vyld~~a-~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
.|..+++.|..+. .-+.|+.+.+++.++.......++ .. ..++|+.+++++|++++ +|+++ +|+++
T Consensus 16 ~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----~~------~~~lr~~ia~~~~~~~~-~i~~~-~G~~~ 82 (346)
T TIGR01141 16 LGGKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPD-----PD------PAELKQALADYYGVDPE-QILLG-NGSDE 82 (346)
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCC-----CC------HHHHHHHHHHHhCcChH-HEEEc-CCHHH
Confidence 3334566665333 234567788888876532110010 01 25799999999998776 89998 78888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~ 231 (609)
++..++..+ +++|| .|+++.++|+.+...++..|++++.++++.++.+|++++++++.
T Consensus 83 ~l~~~~~~l---------------~~~gd--~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~----- 140 (346)
T TIGR01141 83 IIELLIRAF---------------LEPGD--AVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID----- 140 (346)
T ss_pred HHHHHHHHh---------------cCCCC--EEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-----
Confidence 888887765 36788 68888888887777778899999999998888899999999876
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCCC-C
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPG-S 305 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (609)
++++++++++++||||.+.|++++.++++.+ |+++++|++++.-.. ..++.. ....++++.|++|++|.|+ +
T Consensus 141 ~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~g~~G~r 218 (346)
T TIGR01141 141 DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLA--EYPNLIVLRTLSKAFGLAGLR 218 (346)
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHh--hCCCEEEEehhhHhhhchhhh
Confidence 6799999999999999999999999999887 999999999762111 111111 1123577789999997553 4
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|++++++++ ++.+.+... ..+.+...+ .++++++ .+....+.+.++.+
T Consensus 219 ~G~~~~~~~~--~~~~~~~~~--------------------------~~~~~~~~~--~~~~~~l-~~~~~~~~~~~~~~ 267 (346)
T TIGR01141 219 IGYAIANAEI--IDALNKVRA--------------------------PFNLSRLAQ--AAAIAAL-RDDDFIEKTVEEIN 267 (346)
T ss_pred ceeeecCHHH--HHHHHhccC--------------------------CCCCCHHHH--HHHHHHh-CCHHHHHHHHHHHH
Confidence 8999998887 333322110 011112222 2222222 12123667778888
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.+.|.+++++++..+ ...++++.+.. +..++.+.|.+ .||.+++|..+.+
T Consensus 268 ~~~~~l~~~L~~~~g~~~~~~----~g~~~~~~~~~-------------------~~~~~~~~L~~-~gI~v~~g~~f~~ 323 (346)
T TIGR01141 268 AERERLYDGLKKLPGLEVYPS----DANFVLIRFPR-------------------DADALFEALLE-KGIIVRDLNSYPG 323 (346)
T ss_pred HHHHHHHHHHHhcCCCEECCC----cCCEEEEecCC-------------------CHHHHHHHHHH-CCeEEEeCCCcCC
Confidence 889999999988888886533 23455444321 35778888866 6999998865431
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.++++|+|++ +++|+++++++|+
T Consensus 324 ----------------------------~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 324 ----------------------------LPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ----------------------------CCCeEEEecC---CHHHHHHHHHHhC
Confidence 1489999987 8999999998873
No 59
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=2.8e-24 Score=231.77 Aligned_cols=323 Identities=16% Similarity=0.110 Sum_probs=220.7
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
.+.|.+++.+.+..+..+++....+.+ ......++++.+++++|.+ .++++++|+. |+..++..+.
T Consensus 70 ~p~v~~a~~~~~~~~~~~~~~s~~~~~--~~~~~~~le~~la~~~g~~---~~~~~~sG~~-An~~~l~~l~-------- 135 (407)
T PRK07179 70 HPDIIKAQIAALQEEGDSLVMSAVFLH--DDSPKPQFEKKLAAFTGFE---SCLLCQSGWA-ANVGLLQTIA-------- 135 (407)
T ss_pred CHHHHHHHHHHHHHhCCCCCccccccC--CchHHHHHHHHHHHHhCCC---cEEEECCHHH-HHHHHHHHhC--------
Confidence 467888888888766555543211111 1235677889999999985 3567767766 5566666553
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY 249 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~ 249 (609)
.+|+ .|+++.++|.+....++..|++++.++. .|+++|++++++ .++++|++++++|+||.+
T Consensus 136 -------~~g~--~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~----~~~~lV~v~~v~n~tG~i 197 (407)
T PRK07179 136 -------DPNT--PVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIER----HGPGIIVVDSVYSTTGTI 197 (407)
T ss_pred -------CCCC--EEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHh----cCCeEEEECCCCCCCCcc
Confidence 5777 6889999999998888888988876653 489999999973 257899999999999999
Q ss_pred cCHHHHHHHHHHhCCeEEEeccccCCccccc----CCCCC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC
Q 038499 250 SDTRSIARLLHQYGGFACFDFAASGPYVEID----VRSGQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS 324 (609)
Q Consensus 250 ~dl~~I~~la~~~g~~vivD~A~~~~~~~id----~~~~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~ 324 (609)
.|+++|.++|++||+++|+|++|+.+....+ +.... ..++|+++.|+||++|++ +|++++++++. +.+...
T Consensus 198 ~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l~~~~~~~--~~~~~~ 273 (407)
T PRK07179 198 APLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR--AGIITCPRELA--EYVPFV 273 (407)
T ss_pred ccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEEEeCHHHH--HHHHHh
Confidence 9999999999999999999999987643221 11111 125699999999999853 69999988772 222100
Q ss_pred ccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 325 TCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
. ......+|++...+ +.+++... + ..+...++.+++++++.+.|.++ +++
T Consensus 274 ~-----------------------~~~~~~~t~~~~~~aa~~aal~~~--~--~~~~~~~~l~~~~~~l~~~L~~~-g~~ 325 (407)
T PRK07179 274 S-----------------------YPAIFSSTLLPHEIAGLEATLEVI--E--SADDRRARLHANARFLREGLSEL-GYN 325 (407)
T ss_pred C-----------------------cCeeeCCCCCHHHHHHHHHHHHHH--h--cCHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 0 00011234332222 22333332 1 12456788889999999999887 776
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHH
Q 038499 403 ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~ 482 (609)
+.+. .+++.+.+.. . .....+.+.|.+ .||.++ .+|. |....
T Consensus 326 v~~~-----~~i~~l~~~~-~----------------~~~~~~~~~L~~-~GI~~~--~~~~-p~~~~------------ 367 (407)
T PRK07179 326 IRSE-----SQIIALETGS-E----------------RNTEVLRDALEE-RNVFGA--VFCA-PATPK------------ 367 (407)
T ss_pred CCCC-----CCEEEEEeCC-H----------------HHHHHHHHHHHH-CCceEe--eecC-CCCCC------------
Confidence 6532 3566555432 1 134567777755 599744 2333 21110
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++.+||+++.++|++|+++++++|++++++.
T Consensus 368 -----------~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 368 -----------NRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred -----------CCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 14799999999999999999999999988763
No 60
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=2.3e-24 Score=227.40 Aligned_cols=325 Identities=18% Similarity=0.113 Sum_probs=220.6
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
++.|.+++.+.+.. |++...+ +.........+.++++.+++++|++ +.+++ ++|+.+ +..++..+
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~-~sg~~a-~~~~~~~~--------- 81 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGG-SRLISGTSDLHEELEEELAEFHGKE--AALVF-SSGYAA-NDGVLSTL--------- 81 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCC-cCeecCCchHHHHHHHHHHHHhCCC--CEEEe-ccHHHH-HHHHHHHh---------
Confidence 68899999998865 3443221 1112234667889999999999985 24554 477664 44444444
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY 249 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~ 249 (609)
+++|| .|+++.++|+++...++..|++++.++. +|++++++.+++.....+++++++++++|+||.+
T Consensus 82 ------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 82 ------AGKGD--LIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred ------cCCCC--EEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCc
Confidence 36888 6999999999998889999999988863 4788899888742212467899999999999999
Q ss_pred cCHHHHHHHHHHhCCeEEEeccccCCcccccC-----CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC
Q 038499 250 SDTRSIARLLHQYGGFACFDFAASGPYVEIDV-----RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS 324 (609)
Q Consensus 250 ~dl~~I~~la~~~g~~vivD~A~~~~~~~id~-----~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~ 324 (609)
.|+++|+++|++||+++|+|++++.+...... ......+.|+++.|+||++++ .| |+++.++++ ++.+.+.
T Consensus 149 ~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~~~~--~~~~~~~ 224 (349)
T cd06454 149 APLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGSKEL--IDYLRSY 224 (349)
T ss_pred cCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECCHHH--HHHHHHh
Confidence 99999999999999999999998765443210 001123679999999999985 43 888888776 2222111
Q ss_pred ccCCCceEeecccccccccccccccccccCCC--hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 325 TCGGGTVNYVNGFNEKDTLYLEDIEERESGGT--PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt--p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
.. .. ...++ +.....+.+++.+. .. .+.+.++.+++++++.+.|.++ ++.
T Consensus 225 ~~----------------------~~-~~~~~~~~~~~~a~~~~l~~~--~~--~~~~~~~~~~~~~~l~~~l~~~-g~~ 276 (349)
T cd06454 225 AR----------------------GF-IFSTSLPPAVAAAALAALEVL--QG--GPERRERLQENVRYLRRGLKEL-GFP 276 (349)
T ss_pred ch----------------------hh-hccCCCCHHHHHHHHHHHHHH--hc--CHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 00 00 00122 22233334454443 22 3566788889999999999876 676
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHH
Q 038499 403 ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~ 482 (609)
++++. ...++++.... + .+..++.+.|.++ ||.++++.....++
T Consensus 277 ~~~~~---~~~~~~~~~~~-~----------------~~~~~~~~~L~~~-gI~~~~~~~~~~~~--------------- 320 (349)
T cd06454 277 VGGSP---SHIIPPLIGDD-P----------------AKAVAFSDALLER-GIYVQAIRYPTVPR--------------- 320 (349)
T ss_pred ccCCC---CCcEEEEeCCC-h----------------HHHHHHHHHHHhC-CceEEEecCCccCC---------------
Confidence 66542 22233333321 1 2467888888765 99998642111000
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
..+++|++++++++++|+++++++|+++
T Consensus 321 -----------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 321 -----------GTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -----------CCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1378999999999999999999999865
No 61
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.93 E-value=5.2e-24 Score=229.44 Aligned_cols=346 Identities=18% Similarity=0.160 Sum_probs=223.9
Q ss_pred CCCCCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHh
Q 038499 84 TASGRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTTNMVHE-ASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVM 160 (609)
Q Consensus 84 ~a~g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~~~~~e-~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l 160 (609)
++.++.++.|.+++.+.+...| ++++.. ++.+......+++ +++.+++++|++.. .|+++ +|+ .++..++..+
T Consensus 26 ~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt-~a~~~~l~~l 101 (402)
T cd00378 26 ASENFTSPAVMEAMGSDLTNKYAEGYPGKR-YYGGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGS-QANLAVYFAL 101 (402)
T ss_pred ccCCcCCHHHHHHhcccccccccCCCCCCc-ccCCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcH-HHHHHHHHHh
Confidence 3446678889999887665444 555543 2334444444444 77888999999754 56555 676 5777777766
Q ss_pred cccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-----HHHcCceEEEEecCC---CCCCCHHHHHHHHhhhccCC
Q 038499 161 GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-----WRQSLAEVVEIGLDD---DGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-----~~~~G~~vv~v~~~~---~g~ld~e~L~~al~~~~~~~ 232 (609)
+++|| .|++++++|+++... ++..|++++.++++. ++.+|++++++++.+ +
T Consensus 102 ---------------~~~Gd--~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~----~ 160 (402)
T cd00378 102 ---------------LEPGD--TIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE----F 160 (402)
T ss_pred ---------------cCCCC--EEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh----C
Confidence 47899 699999998876544 455688777776643 588999999999964 5
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
+++++++++++| |...|+++|+++||+||+++++|++|+.+............++|+++.|+||+++||.| |+++.+
T Consensus 161 ~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~g-g~i~~~ 237 (402)
T cd00378 161 KPKLIVAGASAY--PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRG-GLILTR 237 (402)
T ss_pred CCCEEEecCccc--CCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCc-eEEEec
Confidence 788888887765 56779999999999999999999998665432111111011569999999999988876 777777
Q ss_pred c-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 313 K-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 313 ~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+ ++ ++.+..... ....+++.......++.++......+.+...++..++++++
T Consensus 238 ~~~~--~~~l~~~~~------------------------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 291 (402)
T cd00378 238 KGEL--AKKINSAVF------------------------PGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKAL 291 (402)
T ss_pred cHHH--HHHHHHHhC------------------------ccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 6 55 222211000 00122332222222222221111124566778888999999
Q ss_pred HHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 392 LERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
.+.|.++ |+.++... ....++++.+.+ .. .+...+.+.| ++.||.++++.....+.+.
T Consensus 292 ~~~L~~~-g~~~~~~~--~~~~~v~v~~~~-~~---------------~~~~~~~~~l-~~~gI~v~~~~~p~~~~~~-- 349 (402)
T cd00378 292 AEALKER-GFKVVSGG--TDNHLVLVDLRP-KG---------------ITGKAAEDAL-EEAGITVNKNTLPWDPSSP-- 349 (402)
T ss_pred HHHHHhC-CCeEeecC--CCCeEEEEeCCc-cC---------------CCHHHHHHHH-HHcCcEEcCCcCCCCCCCC--
Confidence 9999887 78776321 223444444432 11 2456666766 5579999864322111000
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC----CHHHHHHHHHHHHHHHHhcc
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM----SNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~----t~eeid~ll~al~~v~~~~~ 526 (609)
..+.++|++++..+ +++|++++++.|++++...+
T Consensus 350 ---------------------~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 350 ---------------------FVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred ---------------------CCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 02478999997644 79999999999999887765
No 62
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=228.39 Aligned_cols=321 Identities=15% Similarity=0.104 Sum_probs=220.0
Q ss_pred ceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
..+.|+.+.... .++.+.+++.+.+......+ .....++|+.++++++++++ +|++| +|+++++..
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p-----------~~g~~~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~ 96 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDELALYP-----------DGYAPELRTKVAKHLGVDEE-QLLFG-AGLDEVIQM 96 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCC-----------CCcHHHHHHHHHHHhCCCHH-HEEEC-CCHHHHHHH
Confidence 345554332221 35568888776654211001 11256789999999999876 89998 899999988
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|+++.+.|+.+...+...|++++.++.+ ++.+|+++++++++ ++++
T Consensus 97 ~~~~~---------------~~~gd--~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-----~~~~ 153 (359)
T PRK03158 97 ISRAL---------------LNPGT--NTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-----EQTK 153 (359)
T ss_pred HHHHH---------------hCCCC--EEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-----CCCC
Confidence 87766 37888 69999999998888888899999999987 66789999999887 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGI 308 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (609)
++++++|+||||.+.+.++|.++++. +|+++|+|+++..... +..+......+..+++.|++|.+|.|+ .+|+
T Consensus 154 ~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 233 (359)
T PRK03158 154 IVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGY 233 (359)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhheh
Confidence 99999999999999999999999887 5999999999753211 111110001134678889999998543 4799
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+++++++ ++.+.... ...+++.+.+.+ +.++ +.+....+.+.+..++.+
T Consensus 234 ~v~~~~~--~~~~~~~~--------------------------~~~~~~~~~q~~--~~~~-l~~~~~~~~~~~~~~~~~ 282 (359)
T PRK03158 234 GIASEEL--IEKLNIAR--------------------------PPFNTTRIAQYA--AIAA-LEDQAFLKECVEKNAEGL 282 (359)
T ss_pred hcCCHHH--HHHHHHhc--------------------------CCCCCCHHHHHH--HHHH-hcCHHHHHHHHHHHHHHH
Confidence 9999887 33332110 001222333322 1122 222223445556666777
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|++. ++.++.+ . +.+.+...+ .+..++++.|.+ .||.+++|..|.
T Consensus 283 ~~~~~~l~~~-~~~~~~~----~-g~~i~~~~~------------------~~~~~~~~~l~~-~gv~v~~g~~f~---- 333 (359)
T PRK03158 283 EQYYAFCKEY-GLFYYPS----Q-TNFIFVDTG------------------RDANELFEALLK-KGYIVRSGAALG---- 333 (359)
T ss_pred HHHHHHHHHC-CCeeCCC----c-CcEEEEECC------------------CCHHHHHHHHHH-CCeEEeeCCCCC----
Confidence 7888888776 6766533 2 334343333 246788888866 699999886553
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++||+++ +.+|+++++++|+++
T Consensus 334 -------------------------~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 334 -------------------------FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred -------------------------CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 1489999987 899999999999875
No 63
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=7.5e-24 Score=224.40 Aligned_cols=322 Identities=14% Similarity=0.019 Sum_probs=215.0
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+++.|+.+... ++|+.+.+++.+.+... + .| .. ....++|+.++++++.+++ +|++| +|+++++..
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~~--~----~y-~~----~~~~~lr~~ia~~~~~~~~-~i~it-~Ga~~~l~~ 87 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDCA--E----RY-PD----VEYRHLHQALARHHQVPAS-WILAG-NGETESIFA 87 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHhc--c----cC-cC----ccHHHHHHHHHHHhCcChh-hEEEC-CCHHHHHHH
Confidence 46677665443 46677888887765432 1 01 11 1157899999999999887 89888 899999988
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccCCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~~~ 233 (609)
++..+ .+|+ +|+ ..+.|..+...++..|++++.++.+++ ..+| +++++++. ++
T Consensus 88 ~~~~l----------------~~g~--viv-~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-----~~ 142 (356)
T PRK08056 88 VVSGL----------------KPRR--AMI-VTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-----PD 142 (356)
T ss_pred HHHHh----------------CCCC--EEE-eCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-----CC
Confidence 87754 4565 444 455677777778889999999998753 3444 45556665 58
Q ss_pred ceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----cccc-CCCCCCCCccEEEEcCCCCCCCC-C
Q 038499 234 PILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEID-VRSGQTDGYDAIFLSTHKFLGGP-G 304 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id-~~~~~~~~~D~v~~S~hK~lggp-~ 304 (609)
++++++++++||||.+.+ +++|+++|++||+++|+|+++..-. ..++ +.. ...++++.|+||++|.| .
T Consensus 143 ~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~---~~~~i~~~S~SK~~~~~G~ 219 (356)
T PRK08056 143 LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLAD---NPHLWVLRSLTKFYAIPGL 219 (356)
T ss_pred CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhcc---CCCEEEEEechhhccCcch
Confidence 999999999999999999 7788999999999999999954211 0111 111 13568889999999955 4
Q ss_pred CcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 305 SPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 305 g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.+|++++++ ++ ++.+... ....+.+..+ ..+....+.+......++++
T Consensus 220 RiG~~v~~~~~~--~~~l~~~---------------------------~~~~~~~~~~--~~~a~~~l~~~~~~~~~~~~ 268 (356)
T PRK08056 220 RLGYLVNSDDAA--VARMRRQ---------------------------QMPWSINAFA--ALAGEVILQDRAYQQATWQW 268 (356)
T ss_pred hheeeecCCHHH--HHHHHHh---------------------------CCCCchhHHH--HHHHHHHhCCHHHHHHHHHH
Confidence 599999853 44 2222100 0011222222 22222222222223455677
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.++.++++.+.|+.++++.+..+ ...++ |...+ .+...+++.|.+ .||.+++|..+
T Consensus 269 ~~~~r~~l~~~L~~~~~~~~~~~----~~~~~-~~~~~------------------~~~~~~~~~l~~-~gI~v~~~~~f 324 (356)
T PRK08056 269 LAEEGARFYQALCALPLLTVWPG----RANYL-FLRCE------------------RPDIDLQRALLT-QRILIRSCANY 324 (356)
T ss_pred HHHHHHHHHHHHhcCCCcEEcCC----CCcEE-EEEcC------------------CChHHHHHHHHH-CCeEEEECCCC
Confidence 77888899999988888876533 23333 33322 134678888875 69999988755
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+. .++++||+++ +.++.++++++|+.+.+.
T Consensus 325 ~~~---------------------------~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 355 (356)
T PRK08056 325 PGL---------------------------DSRYYRVAIR---SAAENERLLAALRNVLTG 355 (356)
T ss_pred CCC---------------------------CCCEEEEEEc---CHHHHHHHHHHHHHHHcc
Confidence 311 2579999997 889999999999987653
No 64
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=5.3e-24 Score=226.02 Aligned_cols=323 Identities=16% Similarity=0.101 Sum_probs=218.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.++.++.+.+. +.++.+.+++.+.+......+.. ...++|+.+++++|++++ +|+++++|+++++..
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVE-NIIVGGDGMDEVIDT 102 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHH-HEEEeCCCHHHHHHH
Confidence 56777544322 23455677776665432211111 137789999999999876 888856899999988
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|+++.+.|+.+...++..|++++.++.+.++.+|+++|+++++ ++++
T Consensus 103 ~~~~~---------------~~~gd--~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~ 160 (361)
T PRK00950 103 LMRTF---------------IDPGD--EVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-----EKTK 160 (361)
T ss_pred HHHHh---------------cCCCC--EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-----cCCC
Confidence 87765 37888 68888888887777788899999999977777899999999987 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEec
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTK 313 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~ 313 (609)
++++++++||||.+.|.++|.++|+++|+++++|+++.... ..++.... .....+++.|++|.+|.|+ .+|++++++
T Consensus 161 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 239 (361)
T PRK00950 161 VIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE 239 (361)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH
Confidence 99999999999999999999999999999999999986422 11111110 0122366779999998554 589999988
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
++. ..+.... .. .+.+.+.+ .+++.++ .+....+...++.++.++++.+
T Consensus 240 ~~~--~~~~~~~------------------------~~--~~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~r~~l~~ 288 (361)
T PRK00950 240 WLI--DYYMRAK------------------------TP--FSLTRLSQ--AAAIAAL-SDKEYIEKSIEHGIKSREYLYN 288 (361)
T ss_pred HHH--HHHHHhc------------------------CC--CCCCHHHH--HHHHHHh-cCHHHHHHHHHHHHHHHHHHHh
Confidence 772 2221110 00 01111221 1122222 1212245555666667777777
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.|. +.+..+ ..+++++.+ + . .+..++++.|.+ .||.+++|..+.+
T Consensus 289 ~l~----~~~~~~----~~~~i~~~~-~-~----------------~~~~~~~~~l~~-~gv~v~~~~~f~~-------- 333 (361)
T PRK00950 289 ELP----FKVYPS----EANFVLVDV-T-P----------------MTAKEFCEELLK-RGVIVRDCTSFRG-------- 333 (361)
T ss_pred hcC----eeECCC----cceEEEEEC-C-C----------------CCHHHHHHHHHH-CCEEEeeCCccCC--------
Confidence 665 444322 234455444 3 2 367889998876 5999997654321
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..++++|||++ +.+|+++++++|+.++
T Consensus 334 -------------------~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 334 -------------------LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred -------------------CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 02579999997 8899999999999875
No 65
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=8.1e-24 Score=224.19 Aligned_cols=316 Identities=16% Similarity=0.147 Sum_probs=217.8
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
++.|+.|.+++.+....+ + ...+.++++++.+++++|++ +++++ +|+|++++.++.++.
T Consensus 23 s~~~~~v~~a~~~~~~~~----~--------~~~~~~~~~~~~~a~~~g~~---~~~~~-~g~t~al~~al~al~----- 81 (363)
T TIGR01437 23 STVSDEVADAQKRGAQNY----F--------EIKELVNKTGEYIANLLGVE---DAVIV-SSASAGIAQSVAAVI----- 81 (363)
T ss_pred CCCCHHHHHHHHHHHhcC----C--------CHHHHHHHHHHHHHHhhCCC---eEEEE-cCHHHHHHHHHHHHh-----
Confidence 457888999998875422 1 13577899999999999985 57888 677778888877763
Q ss_pred hHHHHHHhhhcCCC-------------ceEEEECCCCccch----HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc
Q 038499 167 ILREKLIKCLRDEE-------------RWVVFVGPHEHHSN----LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK 229 (609)
Q Consensus 167 ~~~~~~~~~l~~gd-------------~~~Vlv~~~~h~s~----~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~ 229 (609)
++|| ..+|+++.+.+..+ ....+..|+++++++.+ +.+|+++++++|+
T Consensus 82 ----------~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~--- 146 (363)
T TIGR01437 82 ----------TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAIT--- 146 (363)
T ss_pred ----------cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcC---
Confidence 4554 11577765322222 23456689999999863 5699999999998
Q ss_pred cCCCceEEE-EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 230 DAKRPILGS-FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 230 ~~~~~~lv~-~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
++|++++ +++++|++|.+.|+++|+++||+||+++++|+||+.. +......++|++++|+||+++||. .|+
T Consensus 147 --~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~-----~~~~~~~g~D~~~~S~~K~l~gp~-~G~ 218 (363)
T TIGR01437 147 --EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED-----LQKYYRLGADLVIYSGAKAIEGPT-SGL 218 (363)
T ss_pred --hhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc-----hHHHHHcCCCEEEEeCCcccCCCc-eEE
Confidence 6888555 6777899999999999999999999999999999732 221001267999999999999998 699
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
++.++++ ++.+.+...|. ....+.|+.++.++ .++++++. ..+.+.+.++.+ .+
T Consensus 219 l~~~~~~--i~~~~~~~~~~--------------------~~~~~~~~~~~~gl-~aAl~~~~--~~~~~~~~~~~~-~~ 272 (363)
T TIGR01437 219 VLGKKKY--IEWVKLQSKGI--------------------GRAMKVGKENILGL-TAALEQYL--STGKESGAEMVA-KL 272 (363)
T ss_pred EEEcHHH--HHHHHhccCCC--------------------cceeccCHHHHHHH-HHHHHHHH--ccCcccHHHHHH-HH
Confidence 9988777 34443332221 12234566565444 34555553 356666665555 46
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCc----ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcC--cEeccCcc
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQ----AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFG--IQARGGCA 462 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~----~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~G--I~v~~G~~ 462 (609)
+++.++|.++|+++++.+.+.... ..++|... +..++..++.+.|.+ .+ |.+|.
T Consensus 273 ~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~----------------~~g~~~~~l~~~L~~-~~~~I~~r~--- 332 (363)
T TIGR01437 273 TPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES----------------ELGMTAADVVQALRQ-GEPAIYTRG--- 332 (363)
T ss_pred HHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc----------------CCCCCHHHHHHHHhc-CCCCEEEee---
Confidence 689999999999998854221111 12233321 112688999999964 35 77763
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.. ..+.+|+++.. ++++|++.++++|+++
T Consensus 333 ----~~~------------------------~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 ----YKA------------------------NEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred ----eee------------------------cCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 100 25889999975 5699999999999876
No 66
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=5.7e-24 Score=224.78 Aligned_cols=321 Identities=16% Similarity=0.054 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
...++++.+++++|.+ +++++++|+. ++..++..+. +++|| .|+++.++|+++..++...
T Consensus 19 ~~~~~~~~la~~~~~~---~~~~~~sgt~-al~~~l~~l~--------------~~~gd--~vl~~~~~~~~~~~~~~~~ 78 (352)
T cd00616 19 KVREFEKAFAEYLGVK---YAVAVSSGTA-ALHLALRALG--------------IGPGD--EVIVPSFTFVATANAILLL 78 (352)
T ss_pred HHHHHHHHHHHHhCCC---eEEEECCHHH-HHHHHHHHcC--------------CCCCC--EEEeCCcchHHHHHHHHHc
Confidence 4678999999999973 5777766655 6777777663 36788 7999999999999999999
Q ss_pred CceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc
Q 038499 202 LAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 202 G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
|++++.+++++ ++.+|+++|+++++ ++++++++++ ++|.+.|+++|.++|+++|+++|+|++|+.|....+
T Consensus 79 g~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~ 150 (352)
T cd00616 79 GATPVFVDIDPDTYNIDPELIEAAIT-----PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKG 150 (352)
T ss_pred CCeEEEEecCCCcCCcCHHHHHHhcC-----cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECC
Confidence 99999999987 78899999999986 6889888764 799999999999999999999999999998865432
Q ss_pred CCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 281 VRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
. ... ...|+.++|+| |+++++.| |+++.++ ++ ++.+++...++....+ ..+ .........+++
T Consensus 151 ~-~~~-~~~d~~~~S~~~~K~~~~~~g-g~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~ 216 (352)
T cd00616 151 R-KVG-TFGDAGAFSFHPTKNLTTGEG-GAVVTNDEEL--AERARLLRNHGRDRDR--------FKY-EHEILGYNYRLS 216 (352)
T ss_pred E-Ecc-cCcceeEEcCCCCCCCcccCc-eEEEECCHHH--HHHHHHHHHcCCCCCC--------Ccc-ccceeeeccCcC
Confidence 1 111 12477777755 99976554 7777764 44 2333332222221000 000 000111122333
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC--CCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTS--TKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~--~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
++... +.+. ...+.+.+.++.+++.+++.+.|.++++++++.+.. ....++++|.+.. .
T Consensus 217 ~~~aa----~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~------------ 277 (352)
T cd00616 217 EIQAA----IGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP-E------------ 277 (352)
T ss_pred HHHHH----HHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC-c------------
Confidence 33322 2221 223467788888999999999999999999887532 1234566666642 1
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh-------cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL-------LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSN 508 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l-------l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ 508 (609)
...+..++.+.|.+ .||.++ ..|.+...... ..-+.+.++.+ ..+.+|+++++++|+
T Consensus 278 --~~~~~~~v~~~L~~-~gI~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-----------~~~~l~l~~~~~~t~ 341 (352)
T cd00616 278 --AGESRDELIEALKE-AGIETR--VHYPPLHHQPPYKKLLGYPPGDLPNAEDL-----------AERVLSLPLHPSLTE 341 (352)
T ss_pred --CCCCHHHHHHHHHH-CCCCee--eecCccccCHhhhhccCCCcCCChHHHHH-----------HhCeEEccCCCCCCH
Confidence 01467899999965 599665 34442211100 00111222222 247999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 509 EEFEFTLEALE 519 (609)
Q Consensus 509 eeid~ll~al~ 519 (609)
+|+++++++|+
T Consensus 342 ~di~~i~~~l~ 352 (352)
T cd00616 342 EEIDRVIEALR 352 (352)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 67
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=5e-24 Score=227.82 Aligned_cols=339 Identities=13% Similarity=0.059 Sum_probs=226.6
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.+|.++.+.+. +.++.+.+++.+.+.....+. + .......++|+.+++++|.+++ +|+++ +|+++++..
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~----y----~~~~g~~~lr~~ia~~l~~~~~-~v~~~-~g~t~al~~ 98 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCK----Y----PPPEGFPELRELILKDLGLDDD-EALIT-AGATESLYL 98 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCC----C----CCCcchHHHHHHHHHhcCCCCC-cEEEe-CCHHHHHHH
Confidence 57788765443 456778888877765321111 1 1122367799999999999887 89998 788889998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC---CCCCCHHHHHHHHhhhccCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD---DGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~---~g~ld~e~L~~al~~~~~~~ 232 (609)
++..+ +.+|| .|+++.+.|+.....+...|++++.++++. ++.+|+++++++++ +
T Consensus 99 ~~~~~---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-----~ 156 (380)
T PRK06225 99 VMRAF---------------LSPGD--NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-----E 156 (380)
T ss_pred HHHHh---------------cCCCC--EEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-----C
Confidence 88776 36787 688888888877777788999999998742 35799999999987 5
Q ss_pred CceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC---CcccccCCCCCCCCccEEEEcCCCCCCCCC-C
Q 038499 233 RPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG---PYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-S 305 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~---~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (609)
+++++++++++||||.+.+ +++|+++|++||+++|+|+++.. +.... .... ....+++.|++|++|.|+ .
T Consensus 157 ~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~-~~~~i~~~s~SK~~g~~G~R 233 (380)
T PRK06225 157 NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLA--AEYA-PEHTVTSYSFSKIFGMAGLR 233 (380)
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCch--hhcC-CCCEEEEeechhhcCCccce
Confidence 7899999999999999876 78899999999999999998641 11111 1111 134577789999997342 3
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|++++++++ ++.+.+.. ....++..+.+.+. ...+.......+.+.+..+
T Consensus 234 iG~i~~~~~l--~~~~~~~~-------------------------~~~~~~~~~~~~~a--~~~l~~~~~~~~~~~~~~~ 284 (380)
T PRK06225 234 IGAVVATPDL--IEVVKSIV-------------------------INDLGTNVIAQEAA--IAGLKVKDEWIDRIRRTTF 284 (380)
T ss_pred eEEEecCHHH--HHHHHHHH-------------------------hcccCCCHHHHHHH--HHHHhcchHHHHHHHHHHH
Confidence 7999999887 33332110 00122333333221 1111111112345555556
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++.+.+.+.|++++++.+.... ....++++.+.+ . .++...+.+.|. +.||.+++|..|..
T Consensus 285 ~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~~~~-~---------------~~~~~~l~~~l~-~~gi~v~~g~~~~~ 345 (380)
T PRK06225 285 KNQKLIKEAVDEIEGVFLPVYP--SHGNMMVIDISE-A---------------GIDPEDLVEYLL-ERKIFVRQGTYTSK 345 (380)
T ss_pred HHHHHHHHHHHhCcCCccccCC--CCCeEEEEEccc-c---------------cCCHHHHHHHHH-HCCEEEcCCcccCc
Confidence 6677777888877675432111 123344333322 1 146778888886 46999999876542
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+. .++++|++++ .+++|+++++++|+.+++..+
T Consensus 346 ~~--------------------------~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 346 RF--------------------------GDRYIRVSFS--IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred CC--------------------------CCceEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 11 1479999997 378999999999999987654
No 68
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=225.91 Aligned_cols=333 Identities=11% Similarity=0.068 Sum_probs=218.3
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGTT 150 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGtt 150 (609)
++.++.+... +.++.+.+++.+.+... ....+. ..+ ..++|+.|++++ | .+++++|++| +|++
T Consensus 34 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~----~~~~y~-~~G----~~~lr~aia~~~~~~~g~~~~~~~~I~it-~G~~ 103 (399)
T PRK07681 34 MIDLSIGNPDMPPADFVREEMVHTANQK----ESYGYT-LSG----IQEFHEAVTEYYNNTHNVILNADKEVLLL-MGSQ 103 (399)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhcc----ccCCCC-CCC----cHHHHHHHHHHHHHHhCCCCCCCCeEEEC-CCcH
Confidence 4444433322 34566777777655421 110010 112 334555555554 4 3552378888 8999
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhh
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELY 228 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~ 228 (609)
+++..++.++ +++|| .|+++.+.|+.+...++..|++++.++++++ +.+|++++++++.
T Consensus 104 ~al~~~~~~~---------------~~~Gd--~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-- 164 (399)
T PRK07681 104 DGLVHLPMVY---------------ANPGD--IILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-- 164 (399)
T ss_pred HHHHHHHHHh---------------CCCCC--EEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc--
Confidence 9999988876 37898 6999999999999889999999999999754 4679999999886
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFL 300 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~l 300 (609)
++++++++++|+||||.+.+ +++|+++|++||+++|+|++++... ....+.... .....+++.|++|.+
T Consensus 165 ---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 241 (399)
T PRK07681 165 ---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY 241 (399)
T ss_pred ---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 57999999999999999998 6678889999999999999976321 112222111 012357778999999
Q ss_pred CCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHH
Q 038499 301 GGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHE 378 (609)
Q Consensus 301 ggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~ 378 (609)
|.| ..+|++++++++ ++.+... ......+++.+.+. ++..++ .+ ....+
T Consensus 242 ~~~GlRiG~~i~~~~l--~~~~~~~------------------------~~~~~~~~s~~~q~--~~~~~l-~~~~~~~~ 292 (399)
T PRK07681 242 SLAGSRIGYMIGNEEI--VRALTQF------------------------KSNTDYGVFLPIQK--AACAAL-RNGAAFCE 292 (399)
T ss_pred CCccceeEEEecCHHH--HHHHHHH------------------------HhhcccCCCHHHHH--HHHHHH-hCcHHHHH
Confidence 844 349999998887 3332111 00001122233332 122222 12 11234
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 379 VIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 379 ~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
..+++.++.++.+.+.|++. ++++..+ ..+++.|...+ .. .+..++++.|.++.||.++
T Consensus 293 ~~~~~~~~~~~~l~~~L~~~-g~~~~~p----~~g~f~~~~l~-~~---------------~~~~~~~~~l~~~~gv~v~ 351 (399)
T PRK07681 293 KNRGIYQERRDTLVDGFRTF-GWNVDKP----AGSMFVWAEIP-KG---------------WTSLSFAYALMDRANVVVT 351 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCC----CeeeEEEEECC-CC---------------CCHHHHHHHHHHhCCEEEe
Confidence 55566677778888888876 6766544 33555555444 21 3567788888776799999
Q ss_pred cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 459 GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 459 ~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+|..|..+ .++++||+++ .++++++.+++.|+.+
T Consensus 352 pg~~f~~~---------------------------~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 352 PGHAFGPH---------------------------GEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred CChhhCcC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 88765411 1489999998 4789999999998773
No 69
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.4e-24 Score=225.56 Aligned_cols=325 Identities=15% Similarity=0.080 Sum_probs=226.1
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
++++++|.+... +.|+.+.+++.+.+... ... .|.. . ...++|+.+++++|.+++++|+++ +|+++++.
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~Y~~-~----~~~~lr~~ia~~~~~~~~~~I~~t-~G~~~~i~ 95 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEV---ALN-RYPD-P----RAAALKAALRAAMGVPAGADVLLG-NGSDELIQ 95 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcc---ccc-cCCC-C----CHHHHHHHHHHHhCcCCCCcEEEc-CCHHHHHH
Confidence 368889877665 46778888888766421 001 0111 0 146789999999998754478887 89999999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.+..++ +++|| .|+++.+.|..+...++..|++++.+++++++.+|+++|++++.. .++
T Consensus 96 ~~~~~~---------------~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~----~~~ 154 (356)
T PRK04870 96 LLALAC---------------AKPGA--TVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE----HRP 154 (356)
T ss_pred HHHHHh---------------cCCCC--EEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCC
Confidence 888776 37888 699999999988888889999999999988888999999999974 478
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc-c-c-cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-E-I-DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILL 310 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~-~-i-d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~ 310 (609)
+++++++++||||.+.+.+++.++++..++++|+|+++..-.. . . .+.. ....+++.|++| +|.|+ .+|+++
T Consensus 155 ~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~---~~~vi~~~S~SK-~~~~GlRiG~~i 230 (356)
T PRK04870 155 ALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLAR---FPNLLVMRTVSK-LGLAGLRLGYLA 230 (356)
T ss_pred CEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhh---CCCEEEEecchh-hhhHHHhhhhhh
Confidence 9999999999999999999988888877899999999642111 1 0 1111 123577889999 55443 499999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
+++++ ++.+..... ..+.+.+.+.+ + ...+++....+...++.++.+++
T Consensus 231 ~~~~~--i~~~~~~~~--------------------------~~~~~~~~q~~--a-~~~l~~~~~~~~~~~~~~~~~~~ 279 (356)
T PRK04870 231 GHPAW--IAELDKVRP--------------------------PYNVNVLTQAT--A-LFALEHVDVLDAQAAQLRAERTR 279 (356)
T ss_pred CCHHH--HHHHHHccC--------------------------CCcCCHHHHHH--H-HHHHhCHHHHHHHHHHHHHHHHH
Confidence 98877 333321100 01111222221 1 11222212255666777888889
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|+.++++.+..+ ...++++. .+ +...+.+.|. +.||.+++|..+.+.
T Consensus 280 l~~~L~~~~~~~~~~~----~~~~~~~~-~~-------------------~~~~~~~~l~-~~gI~v~~~~~f~~~---- 330 (356)
T PRK04870 280 LAAALAALPGVTVFPS----AANFILVR-VP-------------------DAAAVFDGLK-TRGVLVKNLSGMHPL---- 330 (356)
T ss_pred HHHHHHhCCCcEECCC----CCeEEEEE-CC-------------------CHHHHHHHHH-HCCEEEEECCCCCCC----
Confidence 9999988888876432 23344443 32 2467777775 569999976544210
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++||+++ +.+++++++++|+++
T Consensus 331 -----------------------~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 331 -----------------------LANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred -----------------------CCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 2589999998 899999999999875
No 70
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.93 E-value=1.8e-23 Score=203.35 Aligned_cols=334 Identities=18% Similarity=0.148 Sum_probs=253.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+.....+++.++++-++..|........++.|+|+. ++..++.-+ +.|||+ |++....-.+.
T Consensus 44 ~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~-g~E~al~N~---------------lePgd~--vLv~~~G~wg~ 105 (385)
T KOG2862|consen 44 MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHS-GWEAALVNL---------------LEPGDN--VLVVSTGTWGQ 105 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcc-hHHHHHHhh---------------cCCCCe--EEEEEechHHH
Confidence 455677889999999999998876656778778777 455544332 589995 44443333332
Q ss_pred --HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC-HHHHHHHHHHhCCeEEEecc
Q 038499 195 --LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 195 --~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d-l~~I~~la~~~g~~vivD~A 271 (609)
....++.|++|..|+.+....+.++.+++++.+ .++++++++|..+.||++.| ++.+.++||+|+++++||..
T Consensus 106 ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq----h~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~V 181 (385)
T KOG2862|consen 106 RAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ----HKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTV 181 (385)
T ss_pred HHHHHHHhhCceeeEEecCcccCccHHHHHHHHHh----cCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEech
Confidence 345678999999999888888999999999997 68999999999999999999 67788999999999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
++.+..++.|.++ ++|+..+..+|.+|+|.|++++..++.. +.++.....+ .+.+...+..-...|..+.+.+
T Consensus 182 aSlggt~F~mDew---gVDvaytgSQKaL~aP~GLsiisfS~ka--~~~~~~rK~~--~~~~yFd~~~~~~~wgc~~e~~ 254 (385)
T KOG2862|consen 182 ASLGGTEFEMDEW---GVDVAYTGSQKALGAPAGLSIISFSDKA--LEAIRDRKTK--PVSFYFDILRLGNFWGCDGEPR 254 (385)
T ss_pred hhcCCccceehhh---cccEEEecchhhcCCCCCcceeecCHHH--HHHHhhccCC--ceEEEEeHHhhcchhccCCccc
Confidence 9999999999997 9999999999999999999999998776 2222211111 1111111111122233334556
Q ss_pred ccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 352 ESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 352 ~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
....||++..+ ++++++... +.|.+++.++.+++.++++..|+++ |+++.......|+|.+.-...+ ..
T Consensus 255 ~yhhT~pv~lly~Lr~AL~~I~--eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp-~g----- 325 (385)
T KOG2862|consen 255 AYHHTPPVQLLYSLRAALALIA--EEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVP-YG----- 325 (385)
T ss_pred ccccCCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecC-CC-----
Confidence 66778876554 578888774 4599999999999999999999987 8887766556788877766555 22
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSN 508 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~ 508 (609)
.+..+|+..+.+.+++.+.+|..-. .+..+||.+ +...+.
T Consensus 326 ----------vDw~dVv~~~~~~~~vei~gglg~~-----------------------------~gKv~RIGl~gcna~~ 366 (385)
T KOG2862|consen 326 ----------VDWKDVVAYAMSHYVVEIGGGLGPT-----------------------------VGKVFRIGLLGCNANV 366 (385)
T ss_pred ----------CCHHHHHHHHHHhcCEEeccccCCC-----------------------------cccEEEEEEeeccCCc
Confidence 6889999999999999988764322 247899996 666688
Q ss_pred HHHHHHHHHHHHHHHhc
Q 038499 509 EEFEFTLEALEFIAIYG 525 (609)
Q Consensus 509 eeid~ll~al~~v~~~~ 525 (609)
+-++..++.|+..+.+.
T Consensus 367 e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 367 EYIDNVVELLKLALQRK 383 (385)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 88999999998877653
No 71
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=225.80 Aligned_cols=335 Identities=13% Similarity=0.030 Sum_probs=220.6
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGt 149 (609)
+.++++.+..+ +.|+.+.+++.+.+... . . .|.... ...++|+.+++++ | ++++ +|++| +|+
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~-~-~Y~~~~----g~~~lr~~ia~~~~~~~g~~~~~~-~i~it-~G~ 101 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAG---H-T-RYTAAR----GLPALREAIAGFYAQRYGVDVDPE-RILVT-PGG 101 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcC---C-C-ccCCCC----CCHHHHHHHHHHHHHHhCCCCChh-hEEEc-cCc
Confidence 57899988877 56888999988876521 1 1 121111 2345666666665 3 5565 89998 889
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLEL 227 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~ 227 (609)
+++|..++.++ +++|| .|+++.++|+.+...++..|++++.++++.+ +.+|+++|+++++
T Consensus 102 ~~al~~~~~~~---------------~~~gd--~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~- 163 (387)
T PRK08960 102 SGALLLASSLL---------------VDPGK--HWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN- 163 (387)
T ss_pred HHHHHHHHHHh---------------cCCCC--EEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-
Confidence 99999988876 37888 6999999999999999999999999998754 4789999999887
Q ss_pred hccCCCceEEEEecccCccccccCHH---HHHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCC
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lg 301 (609)
++++++++++++||||.+.+.+ +|+++|++||+++++|+++..-.. ...+... ....+++.|++|.+|
T Consensus 164 ----~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g 237 (387)
T PRK08960 164 ----ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV--DDDAFVLNSFSKYFG 237 (387)
T ss_pred ----ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc--cCCEEEEeecccccC
Confidence 5788999999999999999854 577789999999999999653211 1111111 123467789999998
Q ss_pred CCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh--cCHH
Q 038499 302 GPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY--IGHE 378 (609)
Q Consensus 302 gp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~--~g~~ 378 (609)
.|+ .+|++++++++ ++.+... ......+++.+.+.+ +..++ .+. ...+
T Consensus 238 ~~GlRiG~~~~~~~~--~~~~~~~------------------------~~~~~~~~s~~~q~a--~~~~l-~~~~~~~l~ 288 (387)
T PRK08960 238 MTGWRLGWLVAPPAA--VPELEKL------------------------AQNLYISASTPAQHA--ALACF-EPETLAILE 288 (387)
T ss_pred CcccEEEEEEcCHHH--HHHHHHH------------------------HhhhccCCCHHHHHH--HHHHh-hcCcHHHHH
Confidence 453 49999999887 3332111 011112233333322 12222 111 1234
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 379 VIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 379 ~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
.+++..++.++.+.+.|+.+ ++.+... +..+++.|.-.+ .. ..+...+++.|.+++||.++
T Consensus 289 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~---p~g~~f~~~~~~-~~--------------~~~~~~~~~~ll~~~gi~v~ 349 (387)
T PRK08960 289 ARRAEFARRRDFLLPALREL-GFGIAVE---PQGAFYLYADIS-AF--------------GGDAFAFCRHFLETEHVAFT 349 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCcCCcC---CCeeEEEEEecc-cc--------------CCCHHHHHHHHHHhCCEEEc
Confidence 45556666677888888776 5543211 233555555443 10 13456788777666799999
Q ss_pred cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 459 GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 459 ~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
+|..|..+. .++++||+++. +.+++...++.|..++
T Consensus 350 pg~~f~~~~--------------------------~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 350 PGLDFGRHQ--------------------------AGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred CchHhCCCC--------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 987664210 14799999984 5566666666665543
No 72
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.6e-23 Score=218.77 Aligned_cols=324 Identities=14% Similarity=0.078 Sum_probs=221.1
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.+-+|.+... +.|+.+.+++.+.+... ..+ .| .. ....++|+.++++++++++ +|++| +|+++++..+
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~--~~~--~y-~~----~~~~~lr~~ia~~~~~~~~-~i~it-~G~~~~l~~~ 92 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSS--QVN--IY-PD----PTAEKLREELARYCSVVPT-NIFVG-NGSDEIIHLI 92 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcC--ccc--CC-CC----ccHHHHHHHHHHHhCCCcc-cEEEe-cCHHHHHHHH
Confidence 3456655544 45678888887755321 111 11 11 1146789999999999887 89888 8999999988
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+..+ +++|| .|+++.+.|+.+...++..|++++.+++++++.+|+++++++++. .++++
T Consensus 93 ~~~l---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----~~~k~ 151 (351)
T PRK14807 93 MLAF---------------INKGD--VVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK----YQPKL 151 (351)
T ss_pred HHHh---------------cCCCC--EEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc----cCCCE
Confidence 8776 47898 688888888877777788999999999987788999999999973 47899
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC-CCCCCccEEEEcCCCCCCCC-CCcEEEEEech
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS-GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKA 314 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~-~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~ 314 (609)
+++++++||||.+.+.+++.+++++++.++|+|+++...... ...+ .......+++.|++|.+|-| ..+|+++.+++
T Consensus 152 v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~ 230 (351)
T PRK14807 152 VFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGN-TIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANEN 230 (351)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhccc-chHHHhhhCCCEEEEecchHhcccchhceeeeecCHH
Confidence 999999999999999999999999988899999997532111 1100 11113357888999999744 45999999887
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+ ++.+... .. ....+.+.+. ++..++ .+ ...+...++.++.++++.+.
T Consensus 231 ~--~~~~~~~------------------------~~--~~~~~~~~q~--~~~~~l-~~-~~~~~~~~~~~~~r~~l~~~ 278 (351)
T PRK14807 231 I--LKYLNLV------------------------KS--PYNINSLSQV--IALKVL-RT-GVLKERVNYILNERERLIKE 278 (351)
T ss_pred H--HHHHHHc------------------------cC--CCCcCHHHHH--HHHHHH-hH-HHHHHHHHHHHHHHHHHHHH
Confidence 7 2322110 00 0112222222 222222 22 22444555666777888888
Q ss_pred hCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 395 LLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
|++++++.+..+ ..++ .+...+ +...+++.|.+ .||.++.+.. ..+
T Consensus 279 l~~~~g~~~~~~----~~~~-~~i~~~-------------------~~~~~~~~l~~-~gV~v~~~~~---~~~------ 324 (351)
T PRK14807 279 LSKIPGIKVYPS----KTNF-ILVKFK-------------------DADYVYQGLLE-RGILVRDFSK---VEG------ 324 (351)
T ss_pred HHhCCCcEECcC----CccE-EEEEcC-------------------CHHHHHHHHHH-CCEEEEECCC---CCC------
Confidence 888888876532 2333 333333 35678888865 5999985321 000
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.++++||+++ +.++.++++++|++++
T Consensus 325 -------------------~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 325 -------------------LEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred -------------------CCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 1479999997 7899999999998753
No 73
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=223.89 Aligned_cols=321 Identities=14% Similarity=0.093 Sum_probs=222.1
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
+..+++|.+... ++|+.+.+++.+.+... + .|.. .. ..++|+.|++++|.+++ +|++| +|++.++.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~----~Y~~----~~-~~~Lr~aia~~~~v~~e-~I~it-~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALS--G----RYDL----EL-EDDLRTLFAAQEGLPAD-HVMAY-AGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHh--c----CCCC----ch-HHHHHHHHHHHhCcChh-hEEEc-CChHHHHH
Confidence 478999988775 45678888887765321 1 1111 11 56788999999999887 89998 89999999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++..+ +++|| .|+++.++|+.+...++..|++++.++.++++.+|++++++. . +++
T Consensus 110 ~~~~~l---------------~~~gd--~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~-----~~~ 166 (370)
T PRK09105 110 YAVLAF---------------TSPTA--GLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D-----PNA 166 (370)
T ss_pred HHHHHH---------------cCCCC--EEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C-----CCC
Confidence 998876 37888 699999999999888999999999999988888999999876 3 468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccccCCCCCCCCcc-EEEEcCCCCCCCCC-CcEEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEIDVRSGQTDGYD-AIFLSTHKFLGGPG-SPGILL 310 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~id~~~~~~~~~D-~v~~S~hK~lggp~-g~G~L~ 310 (609)
+++++++|+||||.+.+.++|.++++. +++++|+|+++.................+ +++.|++|.+|.|+ ++|+++
T Consensus 167 ~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 246 (370)
T PRK09105 167 GLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAA 246 (370)
T ss_pred CEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeee
Confidence 899999999999999999988888764 48999999997421101111111001223 56669999998553 499999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
+++++ ++.+.+. + ...++.... .++.+.+ .+....+...++.++.+++
T Consensus 247 ~~~~~--i~~l~~~--~--------------------------~~~~~~~~~-~aa~~~L-~~~~~~~~~~~~~~~~r~~ 294 (370)
T PRK09105 247 ARPDL--LAKLARF--G--------------------------HNPLPVPAA-AAGLASL-RDPKLVPQRRAENAAVRED 294 (370)
T ss_pred cCHHH--HHHHHhc--C--------------------------CCCcCHHHH-HHHHHHH-hCHHHHHHHHHHHHHHHHH
Confidence 98887 3333211 0 011222221 2222222 1222345666777788888
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|+++ ++++..+ ..+++.+.+ + .+..++.+.|.++ ||.++.+ |. .
T Consensus 295 l~~~L~~~-g~~~~~~----~~~f~~~~~-~------------------~~~~~l~~~L~~~-gI~v~~~--~~-~---- 342 (370)
T PRK09105 295 TIAWLKKK-GYKCTPS----QANCFMVDV-K------------------RPAKAVADAMAKQ-GVFIGRS--WP-I---- 342 (370)
T ss_pred HHHHHHHC-CCCcCCC----CCcEEEEeC-C------------------CCHHHHHHHHHHC-CcEEecC--CC-C----
Confidence 99999876 6766543 234443222 2 2467888888765 9998422 21 0
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.++++||+++ +++++++++++|+.+.
T Consensus 343 -----------------------~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 343 -----------------------WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -----------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 1589999997 7899999999999875
No 74
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=1.9e-23 Score=226.08 Aligned_cols=349 Identities=17% Similarity=0.155 Sum_probs=223.0
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCcc--CCCCCCchhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYG--NTHTCDSYVGQHTTNMVHE-ASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~--n~~~~~~~~~~~~~~~~~e-~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
.+.|+.+. .+.++.|.+++...+...|+ ++.+. +..+....+..++ +++.+++++|++.. .|+++ +|+. ++.
T Consensus 27 ~~~l~~~~-n~~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~-~i~~~-sgt~-al~ 101 (416)
T PRK00011 27 HIELIASE-NFVSPAVMEAQGSVLTNKYAEGYPGKR-YYGGCEYVDVVEQLAIDRAKELFGAEYA-NVQPH-SGSQ-ANA 101 (416)
T ss_pred Ceeeeccc-CcCCHHHHHHHhchhhcccccCCCCcc-ccccchHHHHHHHHHHHHHHHHhCCCce-eeecC-CchH-HHH
Confidence 44554444 44788899998776654443 33332 2334444555555 78899999999865 56665 7866 677
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-----HHcCceEEEEecCC-CCCCCHHHHHHHHhhh
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-----RQSLAEVVEIGLDD-DGLLDIEALRSKLELY 228 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-----~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~ 228 (609)
.++..+ +++|| .|+++.++|.++...+ ...|++++.++++. ++.+|+++|+++++.
T Consensus 102 ~~l~~l---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~- 163 (416)
T PRK00011 102 AVYFAL---------------LKPGD--TILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE- 163 (416)
T ss_pred HHHHHh---------------cCCCC--EEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh-
Confidence 776665 47898 6999999998654322 23467888888874 588999999999974
Q ss_pred ccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 229 KDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
++++++++++. .+|...|+++|.++|++||+++++|+||+.+.......+....++|++++|+||+++||.| |+
T Consensus 164 ---~~~k~v~~~~~--~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~g-g~ 237 (416)
T PRK00011 164 ---HKPKLIIAGAS--AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRG-GL 237 (416)
T ss_pred ---cCCCEEEECCC--cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCc-eE
Confidence 47888888643 4577789999999999999999999998766542211111112579999999999988885 78
Q ss_pred EEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 309 LLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 309 L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
++.+ +++ .+.+..... ....+++..........+.......+.+.+.++.+++
T Consensus 238 i~~~~~~~--~~~l~~~~~------------------------~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~ 291 (416)
T PRK00011 238 ILTNDEEL--AKKINSAVF------------------------PGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKN 291 (416)
T ss_pred EEeCCHHH--HHHHHHHhC------------------------ccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 8886 455 222211100 0001222222221111111111123567788899999
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++++.+.|+++ |++++.. ....+++++.+.+ .. .+...+.+.|.+ .||.++.+...-.+
T Consensus 292 ~~~l~~~L~~~-g~~~~~~--~~~~~~~~i~~~~-~~---------------~~~~~~~~~L~~-~GI~v~~~~~p~~~- 350 (416)
T PRK00011 292 AKALAEALAER-GFRVVSG--GTDNHLVLVDLRS-KG---------------LTGKEAEAALEE-ANITVNKNAVPFDP- 350 (416)
T ss_pred HHHHHHHHHhC-CCeeeec--CCCCeEEEEeCcc-cC---------------CCHHHHHHHHHH-cCcEEccCcCCCCC-
Confidence 99999999886 7877631 1223444554433 11 345678888854 69999854321100
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY----YMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~----~~t~eeid~ll~al~~v~~~ 524 (609)
+.. ..+..+|++... .+|++|+++++++|++++.+
T Consensus 351 -~~~---------------------~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 351 -RSP---------------------FVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred -CCC---------------------CCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 000 014568996532 46799999999999998764
No 75
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=1.6e-23 Score=229.55 Aligned_cols=312 Identities=15% Similarity=0.112 Sum_probs=216.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..++......++++.+|+++|.+ +.|+|+ +|..+++. ++.++ +++|| .|++++..|+++
T Consensus 140 ~~~g~~~~~~ele~~lA~~~g~~--~ai~~~-~G~~an~~-~i~al---------------~~~Gd--~Vi~d~~~h~s~ 198 (489)
T PLN02483 140 VDGGTTKLHRELEELVARFVGKP--AAIVFG-MGYATNST-IIPAL---------------IGKGG--LIISDSLNHNSI 198 (489)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEEC-CHHHHHHH-HHHHh---------------CCCCC--EEEEcchhhHHH
Confidence 34456778999999999999964 368886 78776553 33333 47899 799999999999
Q ss_pred HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc--CCCc-----e-EEEEecccCccccccCHHHHHHHHHHhCCeE
Q 038499 195 LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD--AKRP-----I-LGSFSACSNVTGIYSDTRSIARLLHQYGGFA 266 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~--~~~~-----~-lv~~s~~sn~TG~~~dl~~I~~la~~~g~~v 266 (609)
...++..|++++.++.+ |+++|++.+++... .+++ + ++++..+.|++|.+.++++|+++|++||+++
T Consensus 199 ~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~l 273 (489)
T PLN02483 199 VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYV 273 (489)
T ss_pred HHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEE
Confidence 99999999999999865 67777776653110 0222 4 6777788899999999999999999999999
Q ss_pred EEeccccCCcccc------cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccc
Q 038499 267 CFDFAASGPYVEI------DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 267 ivD~A~~~~~~~i------d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
++|++|+.+.... +.......+.|+++.|++|.+|+ .| |++++++++ ++.+.....+.
T Consensus 274 ivDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~G-G~i~~~~~l--i~~l~~~~~~~------------ 337 (489)
T PLN02483 274 YLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CG-GYIAGSKEL--IQYLKRTCPAH------------ 337 (489)
T ss_pred EEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-Cc-eEEEcCHHH--HHHHHHhCccc------------
Confidence 9999998654321 11111123679999999999985 44 999998887 33332211000
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEE
Q 038499 341 DTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY--IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFN 418 (609)
Q Consensus 341 ~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~--~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~ 418 (609)
.......|...+.+.++++.+..+. .......++.+++++++.+.|+++ |+.++++. ..+++.+.
T Consensus 338 ---------~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~---~sp~~~l~ 404 (489)
T PLN02483 338 ---------LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDN---DSPVMPIM 404 (489)
T ss_pred ---------cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCC---CCCEEEEE
Confidence 0001123444444555566543221 112344677888899999999887 78777653 34566655
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
+.. . .....+++.|.+ .||.+.+...++.|. ..+.+
T Consensus 405 l~~-~----------------~~~~~~~~~Ll~-~GI~v~~~~fp~~p~--------------------------~~~~v 440 (489)
T PLN02483 405 LYN-P----------------AKIPAFSRECLK-QNVAVVVVGFPATPL--------------------------LLARA 440 (489)
T ss_pred ECC-H----------------HHHHHHHHHHHH-CCcEEeeeCCCCCCC--------------------------CCceE
Confidence 544 1 134567788876 499998643333221 13789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 499 RISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 499 Rls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|++++..+|++|+++++++|+++++..
T Consensus 441 Ri~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 441 RICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988643
No 76
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=3.5e-23 Score=221.57 Aligned_cols=337 Identities=16% Similarity=0.142 Sum_probs=217.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal 153 (609)
+++.++.+... +.++.+.+++.+.+... ..+. |....+..++++.+.+++++.+|. +++++|++| +|++.++
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t-~G~~~~l 104 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENP--ENHR--YPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSL-IGSKEGI 104 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCC--CCCC--CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEEC-CCcHHHH
Confidence 34455444333 23566778777655321 1111 111112234444455555544455 333357777 8999999
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|+++.+.|+.+...++..|++++.++++.+ ..+|++++++++.
T Consensus 105 ~~~~~~~---------------~~~gd--~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~----- 162 (383)
T TIGR03540 105 AHIPLAF---------------VNPGD--IVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA----- 162 (383)
T ss_pred HHHHHHh---------------CCCCC--EEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-----
Confidence 9998876 37888 7999999999998889999999999998753 4579999999887
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC----CcccccCCCCCC-CCccEEEEcCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVEIDVRSGQT-DGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~----~~~~id~~~~~~-~~~D~v~~S~hK~lggp 303 (609)
++++++++++|+||||.+.+ +++|+++|++||+++|+|+++.. +...+.+..+.. ....+++.|++|.+|.|
T Consensus 163 ~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 163 KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCc
Confidence 57999999999999999998 57889999999999999999762 222233322211 13357778999999744
Q ss_pred C-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHH
Q 038499 304 G-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIK 381 (609)
Q Consensus 304 ~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~ 381 (609)
+ .+|+++.++++ ++.+... ......+++...+. ++..++ .+ ....+.++
T Consensus 243 GlRiG~~i~~~~l--~~~~~~~------------------------~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~ 293 (383)
T TIGR03540 243 GWRIGMAVGNADL--IAGLGKV------------------------KTNVDSGVFQAIQY--AAIAAL-NGPQDVVKEIR 293 (383)
T ss_pred cceeeEEeCCHHH--HHHHHHH------------------------HHhcccCCChHHHH--HHHHHH-hCCHHHHHHHH
Confidence 3 48999998887 3332111 00111223333332 222222 12 12234556
Q ss_pred HHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc
Q 038499 382 KQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC 461 (609)
Q Consensus 382 ~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~ 461 (609)
++.++.++.+.+.|++. ++.+..+. .+.+.+...+ +. ++..++++.|.+++||.+++|.
T Consensus 294 ~~~~~~~~~~~~~L~~~-~~~~~~~~----~~~~~~~~l~-~~---------------~~~~~~~~~ll~~~gi~v~~g~ 352 (383)
T TIGR03540 294 KIYQRRRDLLLEALKKI-GIDVEKPK----ATFYVWVPVP-EG---------------YTSAEFAARLLEETGVVVTPGV 352 (383)
T ss_pred HHHHHHHHHHHHHHHhC-CCEecCCC----cceEEEEECC-CC---------------CCHHHHHHHHHHHCCEEEecch
Confidence 67777888899999887 78776542 3444444433 11 4567888887666799999887
Q ss_pred ccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 462 ACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 462 ~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.|... .++++||+++ .++++++..++.|.
T Consensus 353 ~f~~~---------------------------~~~~~Ris~~--~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 353 GFGEY---------------------------GEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred hhCcc---------------------------CCCeEEEEec--CCHHHHHHHHHHHh
Confidence 66411 1479999997 35666666666554
No 77
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.2e-23 Score=222.44 Aligned_cols=325 Identities=16% Similarity=0.135 Sum_probs=218.4
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChHHHHHHHHHHHhcc
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGTTAAIKRLQEVMGI 162 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGttaal~~l~~~l~~ 162 (609)
.++.+.+++.+.+...+ . .|....+ ..++|+.+++++ | .+++ +|++| +|+++++..++..+
T Consensus 47 ~~~~~~~~~~~~~~~~~----~-~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~l-- 113 (391)
T PRK08361 47 TPKNIKEAAKRALDEGW----T-HYTPNAG----IPELREAIAEYYKKFYGVDVDVD-NVIVT-AGAYEATYLAFESL-- 113 (391)
T ss_pred CCHHHHHHHHHHHhcCC----C-CCCCCCC----cHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CChHHHHHHHHHHh--
Confidence 35667777766553211 0 0111112 234555555554 4 4555 89998 78888888887766
Q ss_pred cchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccCCCceEEEEe
Q 038499 163 AVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDAKRPILGSFS 240 (609)
Q Consensus 163 ~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~~~~~lv~~s 240 (609)
+++|| .|+++.++|......++..|++++.++++.+ +.+|+++|+++++ +++++++++
T Consensus 114 -------------~~~g~--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-----~~~~~v~i~ 173 (391)
T PRK08361 114 -------------LEEGD--EVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-----KRTRMIVIN 173 (391)
T ss_pred -------------cCCCC--EEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-----cccEEEEEe
Confidence 37888 6999999999988888889999999998763 4799999999998 578999999
Q ss_pred cccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEe
Q 038499 241 ACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMT 312 (609)
Q Consensus 241 ~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~ 312 (609)
+++||||.+.| +++|+++|+++++++|+|++++... ....+.... ...++++.|++|.+|.|+ .+|+++++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~~ 252 (391)
T PRK08361 174 YPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIAP 252 (391)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhccC
Confidence 99999999999 7889999999999999999975321 111221111 134788899999998553 38999998
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI---GHEVIKKQEETYIE 389 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~---g~~~i~~~~~~l~~ 389 (609)
+++ ++.+... ......+.+.+.+.+ +.. ++.+.. ..+.++++.++.++
T Consensus 253 ~~~--~~~~~~~------------------------~~~~~~~~~~~~q~~--~~~-~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK08361 253 EQV--IKDMIKL------------------------HAYIIGNVASFVQIA--GIE-ALRSKESWKAVEEMRKEYNERRK 303 (391)
T ss_pred HHH--HHHHHHH------------------------HhhhccCCChHHHHH--HHH-HhcCCcccHHHHHHHHHHHHHHH
Confidence 877 3322110 000001222333322 112 222211 24667777788888
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
.+.+.|+.++++.+..+ ..+.+.|...+ .. .++..++++.|.+++||.+++|..|...
T Consensus 304 ~~~~~L~~~~~~~~~~p----~g~~~~~~~l~-~~--------------~~~~~~l~~~l~~~~gv~v~pg~~f~~~--- 361 (391)
T PRK08361 304 LVLKRLKEMPHIKVFEP----KGAFYVFANID-ET--------------GMSSEDFAEWLLEKARVVVIPGTAFGKA--- 361 (391)
T ss_pred HHHHHHHhCCCCeecCC----CEEEEEEEECC-CC--------------CCCHHHHHHHHHHhCCEEEcCchhhCCC---
Confidence 89999988888877655 33444444333 10 1356788888876689999988765311
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||+++ .++++++..++.|+.+++.
T Consensus 362 ------------------------~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 362 ------------------------GEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred ------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 2489999998 3677888888888877653
No 78
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=2.3e-23 Score=224.98 Aligned_cols=344 Identities=17% Similarity=0.134 Sum_probs=221.5
Q ss_pred CceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
..+.|..+...+. .++.|.+++.+.+..+-.+.+ . +..-+.......++++.+++++|.+ + .|+|+ +|++++..
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~-~-s~~~~~~~~~~~~Le~~la~~~g~~-~-~i~~~-sG~~a~~~ 121 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAG-G-TRNISGTSHPHVLLERELADLHGKE-S-ALLFT-SGYVSNDA 121 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCc-h-hhhcccChHHHHHHHHHHHHHhCCC-C-EEEEC-cHHHHHHH
Confidence 3466776666655 356788888887765422221 1 1111123334678999999999963 3 66665 89875333
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
++..+. .+.+|+ +|+++..+|.++...++..|++++.++.+ |.+++++.+.+. ..+++
T Consensus 122 -~i~~l~-------------~~~~g~--~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~-~~~~t 179 (410)
T PRK13392 122 -ALSTLG-------------KLLPGC--VILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASV-DPDRP 179 (410)
T ss_pred -HHHHHh-------------cCCCCC--EEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhc-cCCCC
Confidence 333331 024676 78888889999988888889998877643 566677666532 11478
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc---CC--CCCCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID---VR--SGQTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id---~~--~~~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
++|++++++||||.+.|+++|.++|++||+++++|++|+.+..... +. ....+.+|+++.|++|++|+++ |++
T Consensus 180 ~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~ 257 (410)
T PRK13392 180 KLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYI 257 (410)
T ss_pred EEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc--chh
Confidence 9999999999999999999999999999999999999985532111 00 0011356888899999999765 788
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV-IQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i-~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+.++++ ++.+.....+ ..+..+.+++ ...+.+++... +.. ....++.++.+
T Consensus 258 ~~~~~~--~~~l~~~~~~----------------------~~~s~~~~~~~~~a~~aaL~~~--~~~--~~~~~~~~~~~ 309 (410)
T PRK13392 258 AASADL--IDFVRSFAPG----------------------FIFTTALPPAVAAGATAAIRHL--KTS--QTERDAHQDRV 309 (410)
T ss_pred hcCHHH--HHHHHHhCcc----------------------hhccCcCCHHHHHHHHHHHHHH--hcC--HHHHHHHHHHH
Confidence 888777 2322111000 0011112222 22233444432 222 23446677788
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|+++ |+++..+ ..+++.+.+.. + ....++++.|.++.||.++++.....|.
T Consensus 310 ~~l~~~L~~~-g~~~~~~----~~~~~~i~~~~-~----------------~~~~~~~~~L~~~~GI~v~~~~~p~~~~- 366 (410)
T PRK13392 310 AALKAKLNAN-GIPVMPS----PSHIVPVMVGD-P----------------TLCKAISDRLMSEHGIYIQPINYPTVPR- 366 (410)
T ss_pred HHHHHHHHHc-CCCCCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHHhCCEEEeeeCCCCCCC-
Confidence 8999999876 6766533 33454333322 1 1345788888666799999643211110
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+++|++++.++|++|+++++++|+++.++
T Consensus 367 -------------------------~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 367 -------------------------GTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred -------------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999998765
No 79
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.5e-23 Score=223.06 Aligned_cols=312 Identities=16% Similarity=0.084 Sum_probs=215.8
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
++.+.+++.+.+......+. . . ..++|+.+++++|++++ +|++| +|+++++..++..+
T Consensus 47 ~~~~~~a~~~~~~~~~~y~~------~-~----~~~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~~~~~l--------- 104 (367)
T PRK02731 47 SPKAIEAIRAAADELHRYPD------G-S----GFELKAALAEKFGVDPE-RIILG-NGSDEILELLARAY--------- 104 (367)
T ss_pred CHHHHHHHHHHHHhhcCCCC------C-c----HHHHHHHHHHHhCcCHH-HEEEc-CCHHHHHHHHHHHh---------
Confidence 45577877776543211111 1 0 25789999999999876 89888 89999998887766
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY 249 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~ 249 (609)
+++|| .|+++.+.|..+...++..|++++.++.+ ++.+|+++++++++ ++++++++++++||||.+
T Consensus 105 ------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~-----~~~~~v~l~~p~nptG~~ 170 (367)
T PRK02731 105 ------LGPGD--EVIYSEHGFAVYPIAAQAVGAKPVEVPAK-DYGHDLDAMLAAVT-----PRTRLVFIANPNNPTGTY 170 (367)
T ss_pred ------cCCCC--EEEEecCCHHHHHHHHHHcCCeEEEeccc-CCCCCHHHHHHHhC-----CCCcEEEEeCCCCCCCcC
Confidence 36888 68998888877776677889999999884 46789999999997 578999999999999999
Q ss_pred cCHHHHHHHHHHh--CCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCC
Q 038499 250 SDTRSIARLLHQY--GGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFP 322 (609)
Q Consensus 250 ~dl~~I~~la~~~--g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~ 322 (609)
.|.++|.++++.+ |+++++|+++..... ...+.........+++.|++|.+|.|+ ++|++++++++ ++.+.
T Consensus 171 ~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~--~~~l~ 248 (367)
T PRK02731 171 LPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEI--IDALN 248 (367)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHH--HHHHH
Confidence 9999999999875 899999999653211 111110101123466779999987443 58999999887 33332
Q ss_pred CCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
... ..+ +.+.+.+ .++.+++ ++....+.++++.+++++++.+.|++. ++.
T Consensus 249 ~~~------------------------~~~--~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 298 (367)
T PRK02731 249 RVR------------------------QPF--NVNSLAL--AAAVAAL-DDDAFVEKSRALNAEGMAWLTEFLAEL-GLE 298 (367)
T ss_pred Hcc------------------------CCC--CCCHHHH--HHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 110 000 1112222 2222222 222235677777888888899999877 666
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHH
Q 038499 403 ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~ 482 (609)
+..+ ..+++++.+.. . .+..++++.|.+ .||.++++..+.
T Consensus 299 ~~~~----~g~~~~i~~~~-~----------------~~~~~~~~~L~~-~gI~v~~~~~~~------------------ 338 (367)
T PRK02731 299 YIPS----VGNFILVDFDD-G----------------KDAAEAYQALLK-RGVIVRPVAGYG------------------ 338 (367)
T ss_pred cCCC----CceEEEEECCC-C----------------CCHHHHHHHHHH-CCEEEEeCCCCC------------------
Confidence 6522 34555555532 1 357788898865 699999764321
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +.+|+++++++|+++++
T Consensus 339 -----------~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 339 -----------LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred -----------CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 1479999997 88999999999998764
No 80
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=6.1e-23 Score=219.82 Aligned_cols=337 Identities=17% Similarity=0.143 Sum_probs=214.9
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~ 154 (609)
.+.++.+... +.++.+.+++.+.+... .... |....+..++++.+.+++.+.+|. +++++|++| +|+++++.
T Consensus 33 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t-~G~~~~i~ 107 (385)
T PRK09276 33 VISLGIGDPDLPTPDHIIEAMCKAVEDP--ENHQ--YPSYEGMLEFRKAVADWYKRRFGVELDPETEVISL-IGSKEGIA 107 (385)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHhCC--CCCC--CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEc-cCcHHHHH
Confidence 4444444332 34567788887766421 1111 111111233344444444444354 344357776 89999999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~~ 232 (609)
.++..+ +++|| .|+++.+.|+.+...++..|++++.++++.+ ..+|++++++++. +
T Consensus 108 ~~~~~~---------------~~~gd--~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-----~ 165 (385)
T PRK09276 108 HIPLAF---------------VNPGD--VVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-----K 165 (385)
T ss_pred HHHHHh---------------CCCCC--EEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-----c
Confidence 988876 47888 6999999999988888899999999998643 4579999998887 5
Q ss_pred CceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCC----cccccCCCCCC-CCccEEEEcCCCCCCCCC
Q 038499 233 RPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGP----YVEIDVRSGQT-DGYDAIFLSTHKFLGGPG 304 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~----~~~id~~~~~~-~~~D~v~~S~hK~lggp~ 304 (609)
+++++++++|+||||.+.+. ++|+++|++||+++|+|+++... .....+..... .+..+++.|++|.+|.|+
T Consensus 166 ~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 166 KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcc
Confidence 79999999999999999985 67888999999999999997632 11122222211 134577889999998553
Q ss_pred -CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 305 -SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 305 -g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.+|++++++++ ++.+... ......+.+...+. ++..++.......+.++++
T Consensus 246 lRiG~~i~~~~l--~~~~~~~------------------------~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~ 297 (385)
T PRK09276 246 WRIGFAVGNADL--IAGLGKV------------------------KSNVDSGVFQAIQE--AGIAALNGPQEVVEELRKI 297 (385)
T ss_pred hhheeeeCCHHH--HHHHHHH------------------------HhhccCCCCHHHHH--HHHHHHcCcHHHHHHHHHH
Confidence 49999998887 3332111 00001122222221 1112221111234566677
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.++.++++.+.|+++ ++++..+ ..+++.+...+ +. ++..++++.|.++.||.+++|..|
T Consensus 298 ~~~~~~~l~~~L~~~-~~~~~~~----~~~~~~~v~~~-~~---------------~~~~~l~~~ll~~~gi~v~~g~~f 356 (385)
T PRK09276 298 YQERRDILVEGLRKL-GLEVEPP----KATFYVWAPVP-KG---------------YTSAEFATLLLDKAGVVVTPGNGF 356 (385)
T ss_pred HHHHHHHHHHHHHhC-CCcccCC----CcceEEEEECC-CC---------------CCHHHHHHHHHHhCCEEECCchhh
Confidence 777888899999887 7776654 23444444433 11 456788888766679999988766
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
..+ .++++||+++ .+++++...++.|.
T Consensus 357 ~~~---------------------------~~~~~Ris~~--~~~~~l~~~l~~l~ 383 (385)
T PRK09276 357 GEY---------------------------GEGYFRIALT--VPDERIEEAVERIK 383 (385)
T ss_pred CCC---------------------------CCCeEEEEeC--CCHHHHHHHHHHHh
Confidence 421 1479999997 36676666666654
No 81
>PRK07324 transaminase; Validated
Probab=99.92 E-value=2.7e-23 Score=221.44 Aligned_cols=298 Identities=14% Similarity=0.026 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHhC-CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 123 VHEASNYIKKCLG-GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g-~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
..++|+.|+++++ .+++ +|++| +|+++++..++..+ +++|| .|+++.+.|+++...++..
T Consensus 64 ~~~lr~~ia~~~~~~~~~-~vi~t-~G~~~al~~~~~~l---------------~~~gd--~Vl~~~P~y~~~~~~~~~~ 124 (373)
T PRK07324 64 SPEFKEAVASLYQNVKPE-NILQT-NGATGANFLVLYAL---------------VEPGD--HVISVYPTYQQLYDIPESL 124 (373)
T ss_pred CHHHHHHHHHHhcCCChh-hEEEc-CChHHHHHHHHHHh---------------CCCCC--EEEEcCCCchhHHHHHHHc
Confidence 4578899999885 5565 89988 78888898888776 47888 6888888998888888899
Q ss_pred CceEEEEecCCC--CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc
Q 038499 202 LAEVVEIGLDDD--GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 202 G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
|++++.++++.+ +.+|+++|+++++ ++++++++++++||||.+.+ +++|+++|++||+++++|+++..-.
T Consensus 125 g~~v~~v~~~~~~~~~~d~~~l~~~~~-----~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~ 199 (373)
T PRK07324 125 GAEVDYWQLKEENGWLPDLDELRRLVR-----PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLD 199 (373)
T ss_pred CCEEEEEecccccCCCCCHHHHHHhCC-----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccc
Confidence 999999998753 4689999998887 68999999999999999998 8889999999999999999965321
Q ss_pred ccccCCCC-CCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSG-QTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
........ ......+++.|++|.+|.|+ .+|++++++++ ++.+.... .....
T Consensus 200 ~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~l--i~~~~~~~------------------------~~~~~ 253 (373)
T PRK07324 200 EDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEV--IDILRKYR------------------------DYTMI 253 (373)
T ss_pred cCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHH--HHHHHHHh------------------------CcEEe
Confidence 11111111 01123467789999998543 48999998777 33332110 00001
Q ss_pred CChhHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 355 GTPQVIQMIRAALAFWVKE-YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
+.+.+.+.+. . .. +.. ..-.+..++..++.++.+.+.|.+.+++....+ ..+.+.|...+ ..
T Consensus 254 ~~~~~~q~~a-~-~~-l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p----~gg~~~~i~~~-~~--------- 316 (373)
T PRK07324 254 CAGVFDDMLA-S-LA-LEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKP----KAVSTSFVKLD-VD--------- 316 (373)
T ss_pred cCChHHHHHH-H-HH-HcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECC----CceEEEEEEeC-CC---------
Confidence 2222333221 1 11 111 112344455556667778888887777776655 23444444443 11
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
.+..++++.|.++.||.+++|..|. .++++|||++ .+++.++.
T Consensus 317 ------~~~~~~~~~ll~~~gv~v~pg~~F~-----------------------------~~~~iRis~~--~~~~~l~~ 359 (373)
T PRK07324 317 ------MPSEDFCLKLLKETGVLLVPGNRFD-----------------------------LEGHVRIGYC--CDTETLKK 359 (373)
T ss_pred ------CCHHHHHHHHHHhcCEEEECccccC-----------------------------CCCeEEEEec--CCHHHHHH
Confidence 3567788887666899999887553 1479999997 36788888
Q ss_pred HHHHHHHHHHh
Q 038499 514 TLEALEFIAIY 524 (609)
Q Consensus 514 ll~al~~v~~~ 524 (609)
.++.|+.+++.
T Consensus 360 ~l~rl~~~l~~ 370 (373)
T PRK07324 360 GLKKLSEFLRE 370 (373)
T ss_pred HHHHHHHHHHh
Confidence 88888887653
No 82
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=5e-23 Score=217.58 Aligned_cols=321 Identities=15% Similarity=0.095 Sum_probs=216.5
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
++.+.|+.+.+. +.|+.+.+++.+.+......+.. ....++|+.+++++|.+++ +|++| +|+++++.
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----------~g~~~lr~aia~~~~~~~~-~I~it-~Ga~~al~ 89 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPST----------EDERRARAAVAARHGRTPD-EVLLL-AGAAEGFA 89 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCc----------cchHHHHHHHHHHhCcChh-hEEEC-CCHHHHHH
Confidence 357777776654 35677888888766432222211 1256789999999999886 89998 89999998
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.+++ + ++++ +++..+.+......++..|++++.++++.++.+|++++ . +++
T Consensus 90 ~~~~-l----------------~~~~---viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-----~~~ 140 (349)
T PRK07908 90 LLAR-L----------------RPRR---AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-----DDA 140 (349)
T ss_pred HHHh-c----------------CCCe---EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-----cCC
Confidence 8776 4 3544 45556677776777788999999999987677888754 3 468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC--CcccccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG--PYVEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLM 311 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~--~~~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~ 311 (609)
+++++++++||||.+.+.++|.++|++ +.++|+|++++. .....++..... ...+++.|+||.+|-| ..+|++++
T Consensus 141 ~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~ 218 (349)
T PRK07908 141 DLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDL-PGVLVLRSLTKTWSLAGLRVGYALG 218 (349)
T ss_pred CEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccC-CCEEEEeecccccCCccceeeeeec
Confidence 899999999999999999999999974 788999999752 112223322211 2235566999998733 34899999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY--IGHEVIKKQEETYIE 389 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~--~g~~~i~~~~~~l~~ 389 (609)
++++ ++.+.+... ....+++.. +++..++... ...+.++++.++.++
T Consensus 219 ~~~~--~~~~~~~~~------------------------~~~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~r~ 267 (349)
T PRK07908 219 APDV--LARLTRGRA------------------------HWPVGTLQL-----EAIAACCAPRAVAEAAADAARLAADRA 267 (349)
T ss_pred CHHH--HHHHHhcCC------------------------CCCccHHHH-----HHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 8887 333322110 011122111 1122222110 124566777888889
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|+++ ++++..+. . +.+.+...+ +..++.+.|. +.||.+++|..|.+.
T Consensus 268 ~l~~~L~~~-~~~~~~p~---~-g~~~~~~~~-------------------~~~~~~~~l~-~~gI~v~~g~~f~~~--- 319 (349)
T PRK07908 268 EMVAGLRAV-GARVVDPA---A-APFVLVRVP-------------------DAELLRKRLR-ERGIAVRRGDTFPGL--- 319 (349)
T ss_pred HHHHHHHhC-CcEeccCC---C-ceEEEEECC-------------------cHHHHHHHHH-hCCEEEEECCCCCCC---
Confidence 999999887 78877652 2 344444333 2457777774 469999988655310
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++|||++ +++|+++++++|+.+...+
T Consensus 320 ------------------------~~~~vRis~~---~~~~~~~l~~al~~~~~~~ 348 (349)
T PRK07908 320 ------------------------DPDYLRLAVR---PRAEVPVLVQALAEILKAG 348 (349)
T ss_pred ------------------------CCCeEEEEeC---CCccHHHHHHHHHHHHhcc
Confidence 2589999996 8899999999999987654
No 83
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=4.9e-23 Score=236.89 Aligned_cols=347 Identities=13% Similarity=0.084 Sum_probs=244.3
Q ss_pred CceEEecCCCCCC----ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 76 RRLTYADHTASGR----SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 76 ~~~vyld~~a~g~----~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
++.+|.++.+.|. .|..|.+.+.+... +|..-+...-..+.+..+...+.++.|++++|.+.+ ++.++ .++|+
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~-~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~a-naSL~-d~aTA 176 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPG-WYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMS-NASLL-DEGTA 176 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChH-HHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChh-hEeec-CChHH
Confidence 3567999999998 77888788776543 222212111123455678889999999999999987 88898 67777
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhh
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLEL 227 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~ 227 (609)
+.+.++.++. +.+|++..|++++.+|+++...|+. .|++|+.++.+.. + ...
T Consensus 177 aaea~~~a~~--------------~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~- 232 (993)
T PLN02414 177 AAEAMAMCNN--------------ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS- 232 (993)
T ss_pred HHHHHHHHHh--------------cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-
Confidence 8887766554 4555444799999999999988854 5999999986431 1 111
Q ss_pred hccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc-cCCCCCCCCccEEEEcCCCCC-----C
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI-DVRSGQTDGYDAIFLSTHKFL-----G 301 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i-d~~~~~~~~~D~v~~S~hK~l-----g 301 (609)
+. ...++.+..|.+|.+.|+++|+++||++|+++++ +++..+...+ +..++ |+|+++.+.|||+ |
T Consensus 233 ----~~-v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~---GADi~vgsgqKwg~P~G~G 303 (993)
T PLN02414 233 ----GD-VCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEW---GADIVVGSAQRFGVPMGYG 303 (993)
T ss_pred ----Cc-eEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhc---cCcEEEECCCccccCCCCC
Confidence 12 2344566777899999999999999999999999 7776666555 34444 8999999999998 6
Q ss_pred CCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHH---HHHhcC
Q 038499 302 GPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFW---VKEYIG 376 (609)
Q Consensus 302 gp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~---~~~~~g 376 (609)
||. .|++++++++ .+.+++...|++. +..................|++.+|.|+... +.++++.. .....|
T Consensus 304 GP~-aGflavr~~~--~r~~PgriVG~s~-d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~G 379 (993)
T PLN02414 304 GPH-AAFLATSQEY--KRLMPGRIIGVSV-DSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG 379 (993)
T ss_pred CCC-eeEEEECHHH--HhhCCCcccCccc-CCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhcccc
Confidence 666 8999999998 4555545666532 1100000001112333456778899988442 23333322 224479
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE
Q 038499 377 HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ 456 (609)
Q Consensus 377 ~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~ 456 (609)
.+.+.++++.++.++.++|... |+++..+ +...+++|.+.. ..++.+.|.+ .||.
T Consensus 380 l~~Ia~ri~~la~~l~~~L~~~-G~~~~~~---~~f~~vt~~~~~--------------------~~~v~~~L~~-~gI~ 434 (993)
T PLN02414 380 LKTIAQRVHGLAGVFAAGLKKL-GFQVQSL---PFFDTVKVKCSD--------------------ADAIADAAAK-VGIN 434 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CCccCCC---CCcCeEEEecCC--------------------HHHHHHHHHH-CCCe
Confidence 9999999999999999999874 7888654 344566666532 4678888866 5997
Q ss_pred eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 457 ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 457 v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
++.- ..+.+|+|+++++|++||+.++++|..
T Consensus 435 l~~~---------------------------------~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 435 LRVV---------------------------------DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred eEEe---------------------------------cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 7621 136799999999999999999999974
No 84
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.2e-23 Score=219.37 Aligned_cols=323 Identities=16% Similarity=0.074 Sum_probs=219.1
Q ss_pred ceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+.++|+.+.... .++.+.+++.+.+... .. .| ... ...++|+.++++++.+++ +|++| +|++++|..
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~---~~--~y-~~~----~~~~lr~aia~~~~~~~~-~I~it-~G~~~al~~ 92 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDD---LR--LY-PDP----NADALRQAIAAYYGLDPE-QVFVG-NGSDEVLAH 92 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhh---hh--cC-CCC----cHHHHHHHHHHHhCCCHH-HEEEc-CCHHHHHHH
Confidence 578888776654 3567888887655421 11 01 110 135799999999999886 89998 899999999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|+++.+.|+.+...++..|++++.++.++++.+|+++|++ .++
T Consensus 93 ~~~~l---------------~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---------~~~ 146 (353)
T PRK05387 93 AFLAF---------------FNHDR--PLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR---------PNG 146 (353)
T ss_pred HHHHh---------------cCCCC--EEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh---------cCC
Confidence 98876 47898 69999999877766677889999999998888899998862 246
Q ss_pred EEEEecccCccccccCHHHHHHHHHHh-CCeEEEeccccCCc--ccccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPY--VEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLM 311 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~-g~~vivD~A~~~~~--~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~ 311 (609)
++++++|+||||.+.|.+++.++++.+ ++++|+|+++..-. ....+. ......+++.|++|.+|.| ..+|+++.
T Consensus 147 ~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~GlR~G~~~~ 224 (353)
T PRK05387 147 GIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLI--DRYPNLLVVQTFSKSRSLAGLRVGFAIG 224 (353)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHH--hhCCCEEEEEehhHhhcchhhhceeeec
Confidence 789999999999999999999999886 99999999974211 111111 1113368888999998744 35899999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
++++ ++.+.... ......+.+..... ++... +.+....+..+++.++.++++
T Consensus 225 ~~~~--~~~l~~~~------------------------~~~~~~~~~~~~q~-~~~~~-l~~~~~~~~~~~~~~~~~~~l 276 (353)
T PRK05387 225 HPEL--IEALNRVK------------------------NSFNSYPLDRLAQA-GAIAA-IEDEAYFEETRAKVIATRERL 276 (353)
T ss_pred CHHH--HHHHHHhh------------------------ccCCCCCcCHHHHH-HHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 8877 33321110 00001122222111 11111 222223456677778888889
Q ss_pred HHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 392 LERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
.+.|+++ ++++..+ ..+++ |...+ + .+..++++.|.+ .||.++. |..+ .
T Consensus 277 ~~~L~~~-g~~~~~~----~~~~~-~~~~~-~----------------~~~~~~~~~l~~-~gi~v~~---~~~~-~--- 325 (353)
T PRK05387 277 VEELEAL-GFEVLPS----KANFV-FARHP-S----------------HDAAELAAKLRE-RGIIVRH---FNKP-R--- 325 (353)
T ss_pred HHHHHHC-CCeECCC----cCcEE-EEECC-C----------------CCHHHHHHHHHH-CCEEEEE---CCCC-C---
Confidence 9999887 7766432 22333 33333 1 356788888865 5999972 2211 0
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +.+++++++++|+++.+
T Consensus 326 ----------------------~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 326 ----------------------IDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred ----------------------CCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 1489999997 78999999999998754
No 85
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=217.97 Aligned_cols=333 Identities=16% Similarity=0.074 Sum_probs=217.9
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.++.+.+++.+.+... .. .|....+...+++.+.+++.+..| .+++ +|++| +|+++++..++..+
T Consensus 45 ~~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~-~g~~~a~~~~~~~~------ 111 (393)
T PRK05764 45 TPEHIKEAAIEALDDG----KT-KYTPAAGIPELREAIAAKLKRDNGLDYDPS-QVIVT-TGAKQALYNAFMAL------ 111 (393)
T ss_pred CCHHHHHHHHHHHhcC----CC-CcCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEe-CCcHHHHHHHHHHh------
Confidence 3567777777666421 11 111111223333333334333334 4454 89998 78888888887765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+++|| .|+++.+.|..+...++..|++++.++.++ ++.+|+++++++++ ++++++++++++|
T Consensus 112 ---------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~p~N 175 (393)
T PRK05764 112 ---------LDPGD--EVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-----PKTKALILNSPSN 175 (393)
T ss_pred ---------cCCCC--EEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-----ccceEEEEECCCC
Confidence 37888 699999999998888888999999999874 35789999999997 5789999999999
Q ss_pred ccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCC--CCCCccEEEEcCCCCCCCCC-CcEEEEEech
Q 038499 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSG--QTDGYDAIFLSTHKFLGGPG-SPGILLMTKA 314 (609)
Q Consensus 245 ~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~--~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~ 314 (609)
|||.+.+ +++|+++|++||+++++|++++.... ...+... ...+.++++.|++|++|.|+ .+|+++.+++
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~ 255 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKE 255 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHH
Confidence 9999976 67899999999999999999764211 0111111 11245788899999998553 4899998887
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+ ++.+.... .....+++.+.+. ++..++.......+.++++.++.++.+.+.
T Consensus 256 ~--~~~~~~~~------------------------~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 307 (393)
T PRK05764 256 L--IKAMSKLQ------------------------SHSTSNPTSIAQY--AAVAALNGPQDEVEEMRQAFEERRDLMVDG 307 (393)
T ss_pred H--HHHHHHHH------------------------hhcccCCChHHHH--HHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 7 33321110 0001122233332 112222101122345666677778888999
Q ss_pred hCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 395 LLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
|++++++.+..+ ..+++.+...+... .....+..++.+.|.+.+||.+++|..|..
T Consensus 308 L~~~~g~~~~~~----~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--------- 363 (393)
T PRK05764 308 LNEIPGLECPKP----EGAFYVFPNVSKLL-----------GKSITDSLEFAEALLEEAGVAVVPGIAFGA--------- 363 (393)
T ss_pred HhhCCCCcccCC----CcceEEEEeccccc-----------ccccCCHHHHHHHHHHhCCEEEccccccCC---------
Confidence 988888887654 23444444333011 001123577887776668999998876541
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++++||+++ .++++++..+++|.+++++
T Consensus 364 --------------------~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 364 --------------------PGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred --------------------CCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 389999997 4799999999999988764
No 86
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=9.7e-23 Score=218.98 Aligned_cols=329 Identities=16% Similarity=0.129 Sum_probs=221.0
Q ss_pred ChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 89 SLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
.++.+.+++.+.+... ++.+. +....+...+++++++++++++|.+ ++|+++ +|++ ++..++.++
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~---~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~t-sG~~-a~~~~~~~l------- 122 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMAS---VRFICGTQDLHKELEEKLAKFLGTE--DAILYS-SCFD-ANGGLFETL------- 122 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcc---cccccCCcHHHHHHHHHHHHHhCCC--cEEEEc-ChHH-HHHHHHHHh-------
Confidence 5677888887777542 11111 1111234567889999999999975 367777 7865 455555544
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc-CCCceEEEEecccCcc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD-AKRPILGSFSACSNVT 246 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~T 246 (609)
+++|| +|++++++|+++...++..|++++.++. .|++++++++++... ..++++++.+++.|+|
T Consensus 123 --------~~~gd--~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~ 187 (397)
T PRK06939 123 --------LGKED--AIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMD 187 (397)
T ss_pred --------CCCCC--EEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCC
Confidence 47898 7999999999999889889999888764 488999988864211 1268888998899999
Q ss_pred ccccCHHHHHHHHHHhCCeEEEeccccCCccccc----CCCCC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVEID----VRSGQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 247 G~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id----~~~~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
|.+.++++|.++|++||+++|+|++++.+....+ ..... ..++|+++.|+||+++|+. .|++++++++ ++.+
T Consensus 188 G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~--~~~l 264 (397)
T PRK06939 188 GDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGRKEV--IDWL 264 (397)
T ss_pred CCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeCHHH--HHHH
Confidence 9999999999999999999999999865432211 00000 1256899999999997675 5999999887 3333
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCC--hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT--PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ 399 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt--p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p 399 (609)
..... .. ...++ +.....+.+++.+. +. .+.++++.+++++++.+.|.++
T Consensus 265 ~~~~~----------------------~~-~~~~~~~~~~~~a~~~al~~~--~~--~~~~~~~~~~~~~~l~~~L~~~- 316 (397)
T PRK06939 265 RQRSR----------------------PY-LFSNSLAPAIVAASIKVLELL--EE--SDELRDRLWENARYFREGMTAA- 316 (397)
T ss_pred HHhCc----------------------cc-cccCCCCHHHHHHHHHHHHHH--hc--CHHHHHHHHHHHHHHHHHHHHc-
Confidence 21100 00 00122 22222233334432 21 2466778888899999999876
Q ss_pred ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHH
Q 038499 400 NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQS 479 (609)
Q Consensus 400 ~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~ 479 (609)
++++..+ ..+++.+.+.. . .+..++++.|.++ ||.+.++.++..+.
T Consensus 317 ~~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~L~~~-gI~v~~~~~~~~~~------------ 362 (397)
T PRK06939 317 GFTLGPG----EHPIIPVMLGD-A----------------KLAQEFADRLLEE-GVYVIGFSFPVVPK------------ 362 (397)
T ss_pred CCCcCCC----CCCEEEEEECC-H----------------HHHHHHHHHHHHC-CceEeeeCCCCCCC------------
Confidence 5555432 23444443322 1 2356788888776 99998543211110
Q ss_pred HHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 480 YQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 480 ~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+++|++++++++++|+++++++|+.+++..
T Consensus 363 --------------~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 363 --------------GQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 13689999999999999999999999987653
No 87
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=3.4e-23 Score=219.87 Aligned_cols=320 Identities=14% Similarity=0.080 Sum_probs=218.0
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
..+.|+.+.+. ++++.+.+++.+.+......|.. ...++|+.+++++|++++ +|++| +|+++++..
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~-----------g~~~Lr~aia~~~~~~~~-~I~vt-~Gs~e~i~~ 96 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHALYPDG-----------GATTLRQTIANKLHVKME-QVLCG-SGLDEVIQI 96 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHHH
Confidence 56778776655 35667888887654322111111 145689999999999887 89998 899999999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++.++ +++|| .|++..+.|+.+...++..|++++.|+++ ++.+|+++|+++++ ++++
T Consensus 97 ~~~~l---------------~~~gd--~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-----~~~~ 153 (366)
T PRK01533 97 ISRAV---------------LKAGD--NIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-----NDTK 153 (366)
T ss_pred HHHHh---------------cCCCC--EEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-----cCCc
Confidence 98876 37888 69999999999998999999999999986 45699999999987 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHH---HhCCeEEEeccccCCccc---ccC-CCCCCCCccEEEEcCCCCCCCC-CCcE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLH---QYGGFACFDFAASGPYVE---IDV-RSGQTDGYDAIFLSTHKFLGGP-GSPG 307 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~---~~g~~vivD~A~~~~~~~---id~-~~~~~~~~D~v~~S~hK~lggp-~g~G 307 (609)
++++++|+||||.+.+.+++.++++ +++ ++++|+++...... ... .........+++.|++|.+|.| ..+|
T Consensus 154 ~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG 232 (366)
T PRK01533 154 IVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVG 232 (366)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHh
Confidence 9999999999999999777666654 444 67889986421100 000 0011112357888999999855 3599
Q ss_pred EEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 308 ILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 308 ~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
++++++++ ++.+... +...+.+.+.+. ++.+ .+.+....+.+.+..++.
T Consensus 233 ~~i~~~~~--~~~l~~~--------------------------~~~~~~~~~~q~--aa~~-~l~~~~~~~~~~~~~~~~ 281 (366)
T PRK01533 233 YAVGHEEL--IEKLNVV--------------------------RLPFNVSSLAQK--AATI-AFGDDEFIEEIVRVNTEG 281 (366)
T ss_pred HHhCCHHH--HHHHHHh--------------------------cCCCCcCHHHHH--HHHH-HhCCHHHHHHHHHHHHHH
Confidence 99998877 3332111 000112222222 1112 222222344555666667
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++++.+.++.+ ++++..+ ..+++++.+ + +...+.+.|.+ .||.+++ |
T Consensus 282 r~~~~~~l~~~-g~~~~~~----~~nf~~~~~-~-------------------~~~~~~~~l~~-~GI~Vr~---~---- 328 (366)
T PRK01533 282 LRQYESFCKEN-EIPFYQS----QTNFIFLPV-E-------------------NGGEIYEACAH-AGFIIRP---F---- 328 (366)
T ss_pred HHHHHHHHHhC-CCccCCC----cCcEEEEeC-C-------------------CHHHHHHHHHH-CCcEEcc---C----
Confidence 77777777766 6766544 233444333 3 24678888865 6999994 1
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
++++||+++ +.+|+++++++|+.+.+...+
T Consensus 329 ---------------------------~~~iRis~~---~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 329 ---------------------------PNGVRITVG---TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred ---------------------------CCceEEeCC---CHHHHHHHHHHHHHHHHhccc
Confidence 268999998 999999999999998766554
No 88
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=7.6e-23 Score=219.71 Aligned_cols=300 Identities=14% Similarity=0.109 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH
Q 038499 121 NMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (609)
.+++.+.+++.+.+|. +++++|++| +|+++++..++..+ +++|| .|+++.++|+.+...+
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~~~i~vt-~G~~~al~~~~~~~---------------~~~gd--~Vlv~~P~y~~~~~~~ 138 (394)
T PRK05942 77 SFRQAITDWYHRRYGVELDPDSEALPL-LGSKEGLTHLALAY---------------VNPGD--VVLVPSPAYPAHFRGP 138 (394)
T ss_pred HHHHHHHHHHHHHHCCCcCCCCeEEEc-cChHHHHHHHHHHh---------------CCCCC--EEEEcCCCCcchHHHH
Confidence 3444444444444453 444247777 89999999988776 47899 6999999999988888
Q ss_pred HHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEecccc
Q 038499 199 RQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 199 ~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~ 273 (609)
...|++++.++++. ++.+|+++|++++. ++++++++++|+||||.+.+ +++|+++|++||+++|+|++++
T Consensus 139 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~ 213 (394)
T PRK05942 139 LIAGAQIYPIILKPENDWLIDLSSIPEEVA-----QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA 213 (394)
T ss_pred HHcCCEEEEeecCCccCCccCHHHHHHhcc-----ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch
Confidence 88999999999875 34699999999987 58999999999999999998 6778899999999999999965
Q ss_pred CCc----ccccCCCCC-CCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 274 GPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 274 ~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
... ....+.... ..+..+++.|++|.+|.| .++|++++++++ ++.+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l--~~~l~~~~---------------------- 269 (394)
T PRK05942 214 ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHI--IQGLRTLK---------------------- 269 (394)
T ss_pred hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHH--HHHHHHHH----------------------
Confidence 221 111221111 113457778999999744 358999999887 33332110
Q ss_pred ccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCC
Q 038499 348 IEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
.....+.+.+.+.+ .+++.. .....+.++++.++.++++.+.|... ++.+..+ ..+++.|...+ ..
T Consensus 270 --~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~----~~~~f~~~~~~-~~-- 336 (394)
T PRK05942 270 --TNLDYGIFSALQKAAETALQL---PDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPT----KATMYLWVPCP-VG-- 336 (394)
T ss_pred --hhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC----CeeeEEEEECC-CC--
Confidence 00011233333322 222211 11235567777788888888989876 6766544 34555544443 11
Q ss_pred cCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 427 SLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
++..+++..+.++.||.+++|..|... .++++||+++
T Consensus 337 -------------~~~~~~~~~~l~~~gV~v~~g~~f~~~---------------------------~~~~iRis~~--- 373 (394)
T PRK05942 337 -------------MGSTDFALNVLQKTGVVVTPGNAFGEG---------------------------GEGYVRISLI--- 373 (394)
T ss_pred -------------CCHHHHHHHHHHHCCEEEeCChhhCcC---------------------------CCCeEEEEec---
Confidence 345666665556679999987654310 2489999996
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 038499 507 SNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 507 t~eeid~ll~al~~v~~~~ 525 (609)
.+.+.+.++|+.+.+.+
T Consensus 374 --~~~~~l~~~l~~l~~~~ 390 (394)
T PRK05942 374 --ADCDRLGEALDRLKQAG 390 (394)
T ss_pred --CCHHHHHHHHHHHHHhh
Confidence 23466677776665543
No 89
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.7e-23 Score=217.64 Aligned_cols=324 Identities=14% Similarity=0.065 Sum_probs=218.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.+++|+.+.+. ++++.+.+++.+.. +.+. | ... ...++|+.+++++|.+++ +|++| +|+++++..
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~-----~~~~--Y-p~~----~~~~lr~~ia~~~~~~~~-~I~~t-~Ga~~~i~~ 118 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMK-----FPYV--Y-PDP----ESRRLRAALAEDSGLESE-NILVG-CGADELIDL 118 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhH-----hhcc--C-CCC----CHHHHHHHHHHHhCcChh-hEEEc-CCHHHHHHH
Confidence 67888877544 34455777765421 1110 1 110 145799999999999876 89887 899999998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|+++.+.|+.+...++..|++++.++.++++.+|+++|++++.. ++++
T Consensus 119 ~~~~~---------------~~~gd--~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----~~~~ 177 (380)
T PLN03026 119 LMRCV---------------LDPGD--KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET----HKPK 177 (380)
T ss_pred HHHHh---------------cCCCC--EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc----cCCc
Confidence 88776 37888 689888888877777788999999999877788999999999842 5899
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc-CCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEec
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID-VRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTK 313 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id-~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~ 313 (609)
++++++|+||||.+.|.+++.++++.. +++|+|+++..-...-. +.........+++.|++|.+|-| .++|+++.++
T Consensus 178 ~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~ 256 (380)
T PLN03026 178 LLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL 256 (380)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH
Confidence 999999999999999999999999865 89999999752110000 00010113357888999999833 3589999988
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
++ ++.+.... . ..+.+.+.+. ++.+. +.+....+.++++.++.++++.+
T Consensus 257 ~~--i~~l~~~~------------------------~--~~~~~~~~q~--aa~~a-L~~~~~~~~~~~~~~~~r~~l~~ 305 (380)
T PLN03026 257 SI--IEYLWRAK------------------------Q--PYNVSVAAEV--AACAA-LSNPKYLEDVKNALVEERERLFG 305 (380)
T ss_pred HH--HHHHHHhc------------------------C--CCCCCHHHHH--HHHHH-hhCHHHHHHHHHHHHHHHHHHHH
Confidence 87 33321110 0 0111122221 11222 12222345666777778888999
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.|+.++++.+..+ ...++++.+.+ . .+..++.+.|.+ .||.++.+.. + +
T Consensus 306 ~L~~~~~~~~~p~----~~~f~~~~~~~-~----------------~~~~~~~~~l~~-~gI~v~~~~~---~------~ 354 (380)
T PLN03026 306 LLKEVPFLEPYPS----DANFILCRVTS-G----------------RDAKKLKEDLAK-MGVMVRHYNS---K------E 354 (380)
T ss_pred HHHHCCCCeECCC----CCeEEEEECCC-C----------------CCHHHHHHHHHH-CCeEEEECCC---C------C
Confidence 9988766655322 23344443332 1 356788888875 6999996432 1 0
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++|||++ +.+++++++++|+.+
T Consensus 355 --------------------~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 355 --------------------LKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred --------------------CCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 1479999998 789999999999764
No 90
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=6.8e-23 Score=217.01 Aligned_cols=323 Identities=18% Similarity=0.136 Sum_probs=217.6
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.+.+++.+.+.. |+..... +....+......++++.+++++|.+ + .|+++ +|+++++. ++..+
T Consensus 31 ~~~~v~~a~~~~~~~-~~~~~~~-~~~~~g~~~~~~~l~~~la~~~~~~-~-~i~~~-~G~~~~~~-~l~~~-------- 96 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQ-YGAGSTA-SRLVSGNSPLHEELEEELAEWKGTE-A-ALLFS-SGYLANVG-VISAL-------- 96 (360)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCC-cCcccCCcHHHHHHHHHHHHHhCCC-C-EEEEC-chHHHHHH-HHHHh--------
Confidence 557899999887754 2322211 1111223456788999999999853 3 66666 78877664 33443
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGI 248 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~ 248 (609)
+++|| +|++.+++|+++...++..|++++.++. +|+++|++++++.. .++++++++++++|+||.
T Consensus 97 -------~~~gd--~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~-~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 97 -------VGKGD--LILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNR-GERRKLIVTDGVFSMDGD 161 (360)
T ss_pred -------CCCCC--EEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcc-cCCCeEEEEeCCccCCCC
Confidence 36888 7999999999999889999999988874 58999999987421 025789999999999999
Q ss_pred ccCHHHHHHHHHHhCCeEEEeccccCCccccc------CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 249 YSDTRSIARLLHQYGGFACFDFAASGPYVEID------VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 249 ~~dl~~I~~la~~~g~~vivD~A~~~~~~~id------~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
+.|+++|.++|+++|+++|+|++++.+....+ .......+.|+++.|+||++|+ .| |++++++++ ++.+.
T Consensus 162 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~g-G~~~~~~~~--~~~~~ 237 (360)
T TIGR00858 162 IAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YG-AYVAGSQAL--IDYLI 237 (360)
T ss_pred CcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cC-cEEEcCHHH--HHHHH
Confidence 99999999999999999999999876543222 1111113668999999999985 44 899888877 22221
Q ss_pred CCccCCCceEeecccccccccccccccccccCCChhHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 323 PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI-QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~-~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
.... ......++++.. ....+++.+. + ..+.+.++.+++++++.+.|+++ ++
T Consensus 238 ~~~~----------------------~~~~~~~~~~~~~~a~~~al~~~--~--~~~~~~~~~~~~~~~l~~~L~~~-~~ 290 (360)
T TIGR00858 238 NRAR----------------------TLIFSTALPPAVAAAALAALELI--Q--EEPWRREKLLALIARLRAGLEAL-GF 290 (360)
T ss_pred HhCc----------------------cceecCCCCHHHHHHHHHHHHHH--h--hCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 1100 000111222221 1223334332 2 12567788899999999999886 56
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHH
Q 038499 402 KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 402 ~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~ 481 (609)
++..+ ..+++++.... . .+...+.+.|.+ .||.++++..+..+.
T Consensus 291 ~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~l~~-~gI~v~~~~~~~~~~-------------- 334 (360)
T TIGR00858 291 TLMPS----CTPIVPVIIGD-N----------------ASALALAEELQQ-QGIFVGAIRPPTVPA-------------- 334 (360)
T ss_pred ccCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHH-CCeeEeeeCCCCCCC--------------
Confidence 65532 34566655533 1 235678888865 599998653322110
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.++++||+++.+++++|+++++++|+
T Consensus 335 ------------~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 335 ------------GTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ------------CCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 13689999999999999999999874
No 91
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.92 E-value=1.2e-22 Score=214.83 Aligned_cols=346 Identities=21% Similarity=0.211 Sum_probs=219.0
Q ss_pred CcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHH
Q 038499 47 SISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEA 126 (609)
Q Consensus 47 ~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~ 126 (609)
..++.++.++.+++.+.-.-.....| -|+.+-.+++.+..+...+...... .|... ...+...+.+..++
T Consensus 15 ~~~~~~~vl~~~~~~l~~~~~~~~~P------~~~~~~~~~~~~~~i~~~~l~~~~n--~n~~~--~~~~P~~~~~E~~v 84 (373)
T PF00282_consen 15 EGESLEEVLKDLREILAPGVTHWHHP------RFFGFVPGGPSPASILADLLASALN--QNGFT--WEASPAATEIEREV 84 (373)
T ss_dssp SHH-HHHHHHHHHHHTHGCS-TTTST------TBESSSHT--CHHHHHHHHHHHHHT---BTTS--TTTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhccCCCCCCh------hHhhhccCCccHHHHHHHHHHhhhc--ccccc--cccccccccchHHH
Confidence 34447888888887764211111112 2677777777777765555444432 23332 34566788999999
Q ss_pred HHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 127 SNYIKKCLGGGQE------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 127 r~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
.+++++++|.+.+ ...+||++||.+++..+..+.....+... .......++++|+++...|+|...+++.
T Consensus 85 i~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~----~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 85 IRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK----AKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH----HHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred HHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh----hcccccccccccccccccccHHHHhcce
Confidence 9999999999821 25788877787777776554321111100 0011113567999999999999999999
Q ss_pred cCceEEEEecCCCCCCCHHHHHHHHhhhccCCC-ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc-
Q 038499 201 SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR-PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE- 278 (609)
Q Consensus 201 ~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~-~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~- 278 (609)
.|..++.||+++++.+|+++|+++|.+....++ |.+|+.+.+++.||.+.|+++|+++|+++++|+|||+|.++...-
T Consensus 161 lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~ 240 (373)
T PF00282_consen 161 LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLS 240 (373)
T ss_dssp TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGH
T ss_pred eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccc
Confidence 999999999999999999999999986544443 448889999999999999999999999999999999998763321
Q ss_pred ccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC--CCCccCCCceEeecccccccccccccccccccC
Q 038499 279 IDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF--PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 279 id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
..++.. ....+|.++.++|||++.|.++|+++++++....... .+.+.+... ...+.. .+...... .
T Consensus 241 ~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~-------~~~~~~-~~~~~~tl-~ 311 (373)
T PF00282_consen 241 PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDD-------RESDES-YDYGDYTL-Q 311 (373)
T ss_dssp CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S--------SSS-GG-GCEEEGSS-S
T ss_pred ccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccc-------cccccc-cccccccc-c
Confidence 112211 2246899999999999999999999999865211111 111111000 000000 00001111 1
Q ss_pred CChhH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec
Q 038499 355 GTPQV-IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 355 gtp~i-~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~ 420 (609)
++... ...+.+.+.. ....|+.++.++..++++++.++|++.++++++.+ +.+++++|..+
T Consensus 312 ~SR~~~alk~w~~l~~--~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~---~~~~~vcFr~k 373 (373)
T PF00282_consen 312 GSRRFRALKLWATLKS--LGREGYRERIRRCIELARYLADRLRKDPRFELVNE---PDLNIVCFRYK 373 (373)
T ss_dssp SSGHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST---TSSSEEEEEES
T ss_pred ccccchHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC---CCceEEEEEeC
Confidence 22211 1111222222 24457778888889999999999999999999975 58899999863
No 92
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=2e-22 Score=217.50 Aligned_cols=333 Identities=14% Similarity=0.040 Sum_probs=222.9
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.++.+.+++.+.+... .. .|....+..++++.+.+++.+..|. +++++|++| +|+++++..++..+
T Consensus 68 ~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt-~G~~~al~~~~~~l------ 135 (413)
T PLN00175 68 GPDFVKEAAIQAIRDG----KN-QYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVT-SGCTEAIAATILGL------ 135 (413)
T ss_pred CCHHHHHHHHHHHhcC----CC-CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CCHHHHHHHHHHHh------
Confidence 4667788877766531 11 1222233445555555556555564 444368888 88888998887765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|++..+.|+.+...++..|++++.+++++ ++.+|+++|++++. ++++++++++++||
T Consensus 136 ---------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-----~~~k~i~i~~p~NP 199 (413)
T PLN00175 136 ---------INPGD--EVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-----SKTRAILINTPHNP 199 (413)
T ss_pred ---------CCCCC--EEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-----cCceEEEecCCCCC
Confidence 47898 699999999998888999999999999874 57899999999997 57999999999999
Q ss_pred cccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEechhhc
Q 038499 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQ 317 (609)
Q Consensus 246 TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~ 317 (609)
||.+.+ +++|+++|++||+++|+|+++..... ...+.... ..+..+++.|++|.++.|+ .+|++++++++
T Consensus 200 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l-- 277 (413)
T PLN00175 200 TGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL-- 277 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHH--
Confidence 999986 56789999999999999999754321 11222221 1234578889999998553 59999999887
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHhC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
+..+... ......+++.+.+.+. ..++ .+ ....+.++++.++.++.+.+.|.
T Consensus 278 ~~~l~~~------------------------~~~~~~~~s~~~Q~a~--~~~l-~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (413)
T PLN00175 278 TWGVRQA------------------------HSFLTFATATPMQWAA--VAAL-RAPESYYEELKRDYSAKKDILVEGLK 330 (413)
T ss_pred HHHHHHH------------------------HhhccCCCCHHHHHHH--HHHH-hCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322110 0001123333333222 2222 11 12345667777888888999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
+. ++.+..+ ..+++.|.... +. + ..+..++++.|.++.||.+.+|..|......
T Consensus 331 ~~-g~~~~~p----~g~~f~~~~~~-~~------------~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~------- 384 (413)
T PLN00175 331 EV-GFKVYPS----SGTYFVMVDHT-PF------------G-FENDIAFCEYLIEEVGVAAIPPSVFYLNPED------- 384 (413)
T ss_pred HC-CCeecCC----CeeEEEEEecc-cc------------C-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCC-------
Confidence 86 6776654 33555454332 10 0 0135678888776679999988765311000
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ .++++++..++.|+++++
T Consensus 385 -----------------~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 385 -----------------GKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred -----------------CCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 1479999998 378999999999987764
No 93
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=1.7e-22 Score=217.39 Aligned_cols=343 Identities=12% Similarity=-0.025 Sum_probs=217.9
Q ss_pred ceEEecCCCCC----CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeC
Q 038499 77 RLTYADHTASG----RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCG 146 (609)
Q Consensus 77 ~~vyld~~a~g----~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~ 146 (609)
+++.|..+..+ +.++.+.+++.+.+... .. .|....+ ..++|+.+++++ | .+++ +|++|
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~----~~-~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~-~i~it- 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG----HN-YYGPSEG----LPELREAIVKREKRKNGVDITPD-DVRVT- 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC----CC-CCCCCCC----cHHHHHHHHHHHHHhcCCCCChh-hEEEe-
Confidence 45555544432 35677888887766421 11 1111112 345566666655 4 4555 89998
Q ss_pred ChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEE-ecCC-CCCCCHHHHHHH
Q 038499 147 SGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEI-GLDD-DGLLDIEALRSK 224 (609)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v-~~~~-~g~ld~e~L~~a 224 (609)
+|+++++..++..+ +++|| .|+++.++|+.+...++..|++++.+ +.++ ++.+|+++|+++
T Consensus 100 ~G~~~al~~~~~~~---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 162 (398)
T PRK08363 100 AAVTEALQLIFGAL---------------LDPGD--EILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKK 162 (398)
T ss_pred CCHHHHHHHHHHHh---------------CCCCC--EEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhh
Confidence 78888999888776 37898 69999999999988888899998888 5554 346899999999
Q ss_pred HhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc---ccCCCCCCCCccEEEEcCCC
Q 038499 225 LELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE---IDVRSGQTDGYDAIFLSTHK 298 (609)
Q Consensus 225 l~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~---id~~~~~~~~~D~v~~S~hK 298 (609)
++ ++++++++++++||||.+.+ +++|+++|+++|+++|+|++++..... ..+..+.....-+++.|++|
T Consensus 163 ~~-----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 237 (398)
T PRK08363 163 IT-----EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSK 237 (398)
T ss_pred CC-----cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchh
Confidence 87 57899999999999999988 778999999999999999997532111 11111111112456779999
Q ss_pred CCCCC-CCcEEEEE--echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc
Q 038499 299 FLGGP-GSPGILLM--TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI 375 (609)
Q Consensus 299 ~lggp-~g~G~L~~--~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~ 375 (609)
+++.| .++|++++ ++++ ++.+..... . ......+.+.+.+.+. ..++.....
T Consensus 238 ~~~~~GlRiG~~~~~~~~~~--~~~l~~~~~--------------------~-~~~~~~~~s~~~q~~~--~~~l~~~~~ 292 (398)
T PRK08363 238 VYFATGWRLGYIYFVDPEGK--LAEVREAID--------------------K-LARIRLCPNTPAQFAA--IAGLTGPMD 292 (398)
T ss_pred ccCCccceEEEEEEeCcHHH--HHHHHHHHH--------------------H-HhcccccCChHHHHHH--HHHHhCChH
Confidence 97655 36999998 5444 111110000 0 0000012222222211 111111112
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCc
Q 038499 376 GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGI 455 (609)
Q Consensus 376 g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI 455 (609)
..+.++++.++.++++.+.|.+++++.+..+ ..+++.|...+ +. ...+..+++..+.++.||
T Consensus 293 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~-~~-------------~~~~~~~~~~~~l~~~gV 354 (398)
T PRK08363 293 YLEEYMKKLKERRDYIYKRLNEIPGISTTKP----QGAFYIFPRIE-EG-------------PWKDDKEFVLDVLHEAHV 354 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEecCC----CeEEEEEEEec-cC-------------CCCCHHHHHHHHHHhCCE
Confidence 3455667777888889999988888876544 34666664443 10 001234454444456799
Q ss_pred EeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 456 QARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 456 ~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+++|..|..+ .++|+||+++ .++++++..++.|+.++..
T Consensus 355 ~v~~g~~f~~~---------------------------~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 355 LFVHGSGFGEY---------------------------GAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEeCchhhCCC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 99988765311 2489999996 4789999999999887654
No 94
>PRK07682 hypothetical protein; Validated
Probab=99.92 E-value=1.4e-22 Score=216.62 Aligned_cols=329 Identities=12% Similarity=0.049 Sum_probs=218.5
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
+..+.+++.+.+...+ . .|....+..++++.+.+++.+.+|. +++++|++| +|+++++..++..+
T Consensus 35 ~~~~~~~~~~~~~~~~----~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~l------- 101 (378)
T PRK07682 35 PWNVREASIRSLEQGY----T-SYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVT-VGASQALDVAMRAI------- 101 (378)
T ss_pred CHHHHHHHHHHHhcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CChHHHHHHHHHHh-------
Confidence 4456677766553211 0 0111122334444444444444454 343379998 78888999888776
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|++..+.|+.+...++..|++++.++.+. ++.+|+++|++++. ++++++++++++||
T Consensus 102 --------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~~~~p~NP 166 (378)
T PRK07682 102 --------INPGD--EVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-----AKTKAILLCSPNNP 166 (378)
T ss_pred --------CCCCC--EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-----cccEEEEEECCCCC
Confidence 47888 699999999988888888999999998763 56899999999987 57899999999999
Q ss_pred cccccC---HHHHHHHHHHhCCeEEEeccccCCccc---ccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEechhhc
Q 038499 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE---IDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQ 317 (609)
Q Consensus 246 TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~---id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~ 317 (609)
||.+.+ +++|+++|++|++++|+|++++..... ..+.... .....+++.|++|.+|.|+ .+|++++++++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~-- 244 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYF-- 244 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHH--
Confidence 999986 678999999999999999997643211 1111111 1134688889999998443 49999999887
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHhC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.+.... .....+++.+.+. ++..++ .+ ....+.++++.++.++++.+.|+
T Consensus 245 i~~l~~~~------------------------~~~~~~~~~~~q~--a~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~L~ 297 (378)
T PRK07682 245 SEAMLKIH------------------------QYSMMCAPTMAQF--AALEAL-RAGNDDVIRMRDSYRKRRNFFVTSFN 297 (378)
T ss_pred HHHHHHHH------------------------HhhccCCCHHHHH--HHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 33331110 0001123333332 222222 22 12245667777888889999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
++ ++++..+ ..+.+.|.... +. ..+..++++.|.++.||.+++|..|..+
T Consensus 298 ~~-~~~~~~p----~g~~~~~~~~~-~~--------------~~~~~~~~~~ll~~~gv~v~pg~~f~~~---------- 347 (378)
T PRK07682 298 EI-GLTCHVP----GGAFYAFPSIS-ST--------------GLSSEEFAEQLLLEEKVAVVPGSVFGES---------- 347 (378)
T ss_pred HC-CCccCCC----CeeEEEEEecc-CC--------------CCCHHHHHHHHHHhCCEEEcCchhhCcC----------
Confidence 87 6766544 33555554332 10 1356778887765679999998766411
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|||++. ++++++..++.|+++++.
T Consensus 348 -----------------~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 348 -----------------GEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred -----------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 15899999983 789999999999988754
No 95
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.92 E-value=8.8e-23 Score=213.80 Aligned_cols=330 Identities=18% Similarity=0.134 Sum_probs=231.4
Q ss_pred CCCCCceEEecCCCCCCCh-HHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCCCcEEEeCChH
Q 038499 72 PFGKRRLTYADHTASGRSL-RYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG-GGQEDAMIFCGSGT 149 (609)
Q Consensus 72 p~g~~~~vyld~~a~g~~~-~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g-~~~~~~vift~sGt 149 (609)
++|....+.++.+.+.-.| +.+.+++.+.+....-.|.. ...++++.+++++| .+++ +|+. |+|+
T Consensus 18 ~~g~~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~-~V~~-gnGs 84 (356)
T COG0079 18 QYGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPE-NVLV-GNGS 84 (356)
T ss_pred ccCCccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcc-eEEE-cCCh
Confidence 3444467888888776554 66777777766433222322 25678999999999 5554 6665 5999
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK 229 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~ 229 (609)
++.|..+.+++. .+|| .|++..+.|..+...++..|++++.++..+ +.+|++++.+++.
T Consensus 85 de~i~~l~~~~~---------------~~gd--~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~--- 143 (356)
T COG0079 85 DELIELLVRAFV---------------EPGD--TVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR--- 143 (356)
T ss_pred HHHHHHHHHHhh---------------cCCC--EEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh---
Confidence 999999999884 7888 699999999999999999999999999988 8899999999998
Q ss_pred cCCCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcccccCCCCCCCCc-cEEEEcCCCCCCCCC-C
Q 038499 230 DAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVEIDVRSGQTDGY-DAIFLSTHKFLGGPG-S 305 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~~id~~~~~~~~~-D~v~~S~hK~lggp~-g 305 (609)
++++++++|+|+||||...+.++|.+++... +.++++|+|+.-... .+...+....- -++.-|++|++|-++ .
T Consensus 144 --~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlR 220 (356)
T COG0079 144 --DKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLR 220 (356)
T ss_pred --cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhc
Confidence 5799999999999999999999988888765 789999999542111 11111101111 366669999998654 4
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|+++.++++ ++.+.... ..+++.....++....+.+....+...++..
T Consensus 221 lGy~ia~~~~--i~~l~~vr-----------------------------~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~ 269 (356)
T COG0079 221 VGYAIANPEL--IAALNKVR-----------------------------PPFNVSSPALAAAIAALRDADYLEESVERIR 269 (356)
T ss_pred eeeccCCHHH--HHHHHHhc-----------------------------CCCCCCHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 9999999988 33332111 0111111111111111112334567778888
Q ss_pred HHHHHHHHHhCCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 386 TYIERALERLLPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
+.++++.+.|+.++ +. ++.+ ..+|.+...+ .. - ...+.+.|.+ .||.+|. |.
T Consensus 270 ~~r~rl~~~l~~~~-~~~v~pS-----~aNFvlv~~~-~~---------------~-~~~l~~~L~~-~giivR~---~~ 322 (356)
T COG0079 270 EERERLYAALKALG-LFGVFPS-----QANFVLVRVP-DA---------------E-AAALAEALLK-KGILVRD---CS 322 (356)
T ss_pred HHHHHHHHHHHhCC-CCeecCC-----CCcEEEEECC-Cc---------------c-HHHHHHHHHH-CCEEEEe---CC
Confidence 88999999999986 55 5433 2555555544 11 1 4578888876 4999993 33
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
. ++ ..++++||+++ |++|.++++++|+++...
T Consensus 323 ~-~~------------------------~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 323 S-VG------------------------LLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred C-CC------------------------CCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 1 11 12589999999 999999999999998764
No 96
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=9.7e-22 Score=227.38 Aligned_cols=383 Identities=16% Similarity=0.122 Sum_probs=239.2
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH-HH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDS-YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAI-KR 155 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~-~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal-~~ 155 (609)
++.+.+ ......+.+++.+.. .+.+.+.|...- ....+..+++.++.+++++++|.+ ++.+..+|++.+. ..
T Consensus 501 ~i~lGs-ct~~~~p~~~~~~~~--~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~ag 574 (954)
T PRK05367 501 MIPLGS-CTMKLNAAAEMIPIT--WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYAG 574 (954)
T ss_pred eeeCCc-CCCcCCHHHHHHHHh--CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHHH
Confidence 344555 333444444444432 222333333221 234567789999999999999986 3556555554433 22
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCC--ceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEE--RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
++.+... .+++|+ +.+|+++...|+++..++...|++++.++.+.+|.+|+++|+++++.+ ..+
T Consensus 575 L~a~r~~------------~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~--~~~ 640 (954)
T PRK05367 575 LLAIRAY------------HESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEH--ADN 640 (954)
T ss_pred HHHHHHH------------hhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhcc--CCC
Confidence 2211110 023444 457999999999999999999999999999988999999999999741 125
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC-----cEE
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS-----PGI 308 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~ 308 (609)
+.++.++++++..+...|+++|+++||++|+++++|+|+..+...+.- +. ..|+|++++|+||||++|.| +|+
T Consensus 641 la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-pg-~~GADi~~~s~HK~f~~P~G~GGPg~G~ 718 (954)
T PRK05367 641 LAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR-PG-DIGADVSHLNLHKTFCIPHGGGGPGVGP 718 (954)
T ss_pred eEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC-hh-hcCCCEEEecCcccCCCCcCCCCCceEE
Confidence 677888888877444589999999999999999999999766554431 11 23899999999999976644 679
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHH---HHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIK---KQEE 385 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~---~~~~ 385 (609)
+++++.+ .|..+|..... . .+. . .... ..+.++.+...+..++......|.+.++ ++..
T Consensus 719 l~vr~~l------~p~lpg~~v~~--~----~~~----~-~~g~-v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~ 780 (954)
T PRK05367 719 IGVKAHL------APFLPGHPVQI--A----GGE----T-GIGA-VSAAPFGSASILPISWMYIRMMGAEGLRQATEVAI 780 (954)
T ss_pred Eeecccc------cccCCCCccCc--C----CCC----C-CcCc-chhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 9998765 23334432100 0 000 0 0000 0122232222221122222445665554 4444
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
.+++|+.++|++...+...++.. +...-+.|...+ .. .....+..++.+.|.+ +||.+..-. +
T Consensus 781 ~~A~Yl~~~L~~~~~~~~~~~~~-~~~~e~i~~~~~-~~-----------~~~g~~~~di~krL~d-~G~~~~t~~-~-- 843 (954)
T PRK05367 781 LNANYIAKRLKDHYPVLYTGANG-RVAHECILDLRP-LK-----------ESTGITVDDIAKRLID-YGFHAPTMS-F-- 843 (954)
T ss_pred HHHHHHHHHHHhhcCccccCCCC-CcccceEEEeec-cc-----------ccCCCCHHHHHHHHHH-CCCeEeecC-C--
Confidence 89999999998753443333211 111122222221 00 1112467899999965 799876311 1
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc--------------ccCC
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR--------------FLPL 531 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~--------------~~p~ 531 (609)
| .++.+||+++.++|++|+|+++++|+.+..+..+ ..|.
T Consensus 844 p---------------------------v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~~~~~~~~~~ap~ 896 (954)
T PRK05367 844 P---------------------------VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEWPAEDNPLKNAPH 896 (954)
T ss_pred c---------------------------cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchhhhCCC
Confidence 1 1488999999999999999999999998876543 5566
Q ss_pred CcccccCCceeec
Q 038499 532 YNFNIKTGTWCFM 544 (609)
Q Consensus 532 y~~~~~~~~w~~~ 544 (609)
-.-+...++|.|.
T Consensus 897 ~~~~~~~~~w~~~ 909 (954)
T PRK05367 897 TAADLVADEWDHP 909 (954)
T ss_pred CHHHhccCCCCCC
Confidence 6667777788877
No 97
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=1.8e-22 Score=217.49 Aligned_cols=343 Identities=17% Similarity=0.126 Sum_probs=222.3
Q ss_pred eEEecCCCCCCC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASGRS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+..+...|.. ++.|.+++.+++..+..+... +..-........++++.+++++|.+ +.+++ ++|+.++. .+
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~g~~~~~~~Le~~la~~~g~~--~~l~~-~sG~~an~-~a 121 (402)
T TIGR01821 48 TVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGG--TRNISGTNIPHVELEAELADLHGKE--SALVF-TSGYVAND-AT 121 (402)
T ss_pred EEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcc--hhhhhCCcHHHHHHHHHHHHHhCCC--eEEEE-CchHHHHH-HH
Confidence 445555555554 356889998888764222221 2222234566789999999999963 24555 58877533 34
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+..+. ...+++ +|+++..+|.+....++..|+++..++. .|++++++.++.. ..+++++
T Consensus 122 i~~l~-------------~~~~~~--~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~-~~~~~~~ 180 (402)
T TIGR01821 122 LATLA-------------KIIPGC--VIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSV-DPNRPKI 180 (402)
T ss_pred HHHhh-------------CCCCCC--EEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhc-cCCCCeE
Confidence 34331 012555 6777778899998899888988876653 3788888888632 1136889
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc---cC-CCCC-CCCccEEEEcCCCCCCCCCCcEEEEE
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI---DV-RSGQ-TDGYDAIFLSTHKFLGGPGSPGILLM 311 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i---d~-~~~~-~~~~D~v~~S~hK~lggp~g~G~L~~ 311 (609)
|++++++|+||.+.|+++|.++|++||+++++|+||+.|.... .. .... ...+|+++.+++|.+|+++ |+++.
T Consensus 181 v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~ 258 (402)
T TIGR01821 181 IAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAA 258 (402)
T ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC--ceeec
Confidence 9999999999999999999999999999999999998553211 00 0000 1246888889999998655 78888
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
++++ ++.+.....+ ..+..+. |.....+.++++.. +.. +.+.++.++++++
T Consensus 259 ~~~~--~~~l~~~~~~----------------------~~~t~~~~~~~~aaa~aaL~~~--~~~--~~~~~~~~~~~~~ 310 (402)
T TIGR01821 259 SRKL--IDAIRSYAPG----------------------FIFTTSLPPAIAAGATASIRHL--KES--QDLRRAHQENVKR 310 (402)
T ss_pred CHHH--HHHHHHhCcC----------------------ceecCcCCHHHHHHHHHHHHHh--hcC--HHHHHHHHHHHHH
Confidence 8776 2222111000 0011122 22333334455443 222 4556666788899
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|+++ +++++.+ ..+++.+.+.. . .....+.+.|.+++||.+++......|.
T Consensus 311 l~~~L~~~-g~~~~~~----~~~i~~i~~~~-~----------------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~--- 365 (402)
T TIGR01821 311 LKNLLEAL-GIPVIPN----PSHIVPVIIGD-A----------------ALCKKVSDLLLNKHGIYVQPINYPTVPR--- 365 (402)
T ss_pred HHHHHHHc-CCCcCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHhcCCEEEEeECCCCCCC---
Confidence 99999876 6666543 34555554322 1 1245788887666799998643222111
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
...++||+++.++|++|+++++++|+++.++.
T Consensus 366 -----------------------g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 366 -----------------------GTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred -----------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 13689999999999999999999999998753
No 98
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=3.2e-22 Score=216.74 Aligned_cols=349 Identities=13% Similarity=0.009 Sum_probs=225.4
Q ss_pred ceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC------CCCCcEEEe
Q 038499 77 RLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG------GQEDAMIFC 145 (609)
Q Consensus 77 ~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~------~~~~~vift 145 (609)
+++.|..... -+.++.+.+++.+.+.....+. |.. .....++|+.++++++. +++ +|++|
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~----Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~-~v~it 123 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS----YST----CVGLLPARRAIAEYLSRDLPYELSTD-DIYLT 123 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC----CCC----CccCHHHHHHHHHHHhhccCCCCChh-hEEEe
Confidence 5777766532 3456788888887775321111 111 11245677777777642 444 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRS 223 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~ 223 (609)
+|++++|..++..+ +++|| .|+++.+.|+.+.......|++++.+++.+ ++.+|+++|++
T Consensus 124 -~G~~~al~l~~~~l---------------~~~Gd--~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 185 (430)
T PLN00145 124 -AGCAQAIEIIMSVL---------------AQPGA--NILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEA 185 (430)
T ss_pred -CCHHHHHHHHHHHh---------------cCCCC--EEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHH
Confidence 89999999998877 37888 699999999988877888899999998743 56899999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcC
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLST 296 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~ 296 (609)
+++ ++++++++++|+||||.+.+ +++|+++|++||+++|+|+++.... ..+.+........-+++.|+
T Consensus 186 ~~~-----~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 260 (430)
T PLN00145 186 LAD-----ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSI 260 (430)
T ss_pred HhC-----cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecc
Confidence 887 68999999999999999998 6778899999999999999965321 11222111111234777799
Q ss_pred CCCCCCCC-CcEEEEEe--chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q 038499 297 HKFLGGPG-SPGILLMT--KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE 373 (609)
Q Consensus 297 hK~lggp~-g~G~L~~~--~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~ 373 (609)
+|.++.|+ .+|++++. +.+ +....-. ..+.. ......+++.+.+. ++..++.+
T Consensus 261 SK~~~~pG~RlG~iv~~~~~~~--~~~~~~~------------------~~~~~-~~~~~~~~~~~~Q~---a~~~~l~~ 316 (430)
T PLN00145 261 SKRWVVPGWRLGWIATCDPNGI--LKETKVV------------------DSIRN-YLNISTDPATFVQG---AIPQIIAN 316 (430)
T ss_pred ccccCCCCeeEEEEEEecchhh--hhhhHHH------------------HHHHH-HhcccCCCCHHHHH---HHHHHHhc
Confidence 99987664 59999984 232 1110000 00000 00001122233332 22222221
Q ss_pred --hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 374 --YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 374 --~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
....+.+.++.++.++.+.+.|+.++++..... +..+++.|.-.+ ... -....+..+++..|.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~---P~ga~y~~v~l~-~~~----------~~~~~~~~~~~~~ll~ 382 (430)
T PLN00145 317 TKEEFFTKTLGLLKETADICYEKIKEIKCITCPHK---PEGSMFVMVKLD-LSC----------LSGIKDDMDFCCKLAK 382 (430)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcC---CCeeeEEEeccC-hhh----------cCCCCCHHHHHHHHHH
Confidence 223566677788888899999998888765321 234555554333 100 0000134566766667
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+.||.+.+|..|. .++|+||++. .+.++++..++.|+.++.+-.
T Consensus 383 ~~gV~v~pG~~fg-----------------------------~~~~lRis~~--~~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 383 EESVVVLPGSALG-----------------------------MKNWLRITFA--IDPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred hCCEEEeCccccC-----------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 7899999887653 1489999998 478888888888888776543
No 99
>PLN02721 threonine aldolase
Probab=99.92 E-value=7.4e-23 Score=216.35 Aligned_cols=295 Identities=17% Similarity=0.175 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCCceEEEECCCCccchHH---HH
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEERWVVFVGPHEHHSNLL---SW 198 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~---~~ 198 (609)
..++++.+++++|.+. ++++++|+.+++ .++.++ .. +|| .|+++..+|.+... ..
T Consensus 42 ~~~l~~~la~~~~~~~---~~~~~~Gs~a~~-~~l~~~---------------~~~~gd--~Vl~~~~~~~~~~~~~~~~ 100 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA---ALFVPSGTMGNL-ISVLVH---------------CDVRGS--EVILGDNSHIHLYENGGIS 100 (353)
T ss_pred HHHHHHHHHHHhCCce---eEEecCccHHHH-HHHHHH---------------ccCCCC--eEEEcCccceehhcccchh
Confidence 5789999999999853 456668887755 333332 24 788 69999999876665 35
Q ss_pred HHcCceEEEEecCCCCCCCHHHHHHHHhhhcc--CCCceEEEEecc-cCccccccC---HHHHHHHHHHhCCeEEEeccc
Q 038499 199 RQSLAEVVEIGLDDDGLLDIEALRSKLELYKD--AKRPILGSFSAC-SNVTGIYSD---TRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 199 ~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~--~~~~~lv~~s~~-sn~TG~~~d---l~~I~~la~~~g~~vivD~A~ 272 (609)
...|++++.++.++++.+|+++|++++++... .+++++++++++ +|+||.+.| +++|.++|++||+++++|+|+
T Consensus 101 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~ 180 (353)
T PLN02721 101 TLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGAR 180 (353)
T ss_pred hhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchh
Confidence 56799999999888888999999999973210 136889999775 678999877 679999999999999999997
Q ss_pred cCCcc---cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 273 SGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 273 ~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
..+.. ..++... ..++|.++.|+||++++|.| |+++.++++ ++.+.....
T Consensus 181 ~~~~~~~~~~~~~~~-~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~--~~~~~~~~~----------------------- 233 (353)
T PLN02721 181 IFNASVALGVPVHRL-VKAADSVSVCLSKGLGAPVG-SVIVGSKSF--IRKAKRLRK----------------------- 233 (353)
T ss_pred hhcchhhhCCCHHHH-hhhCCEEEEecccccCCcee-eEEecCHHH--HHhHHHHHH-----------------------
Confidence 64321 1111111 12679999999999998764 456677776 333211100
Q ss_pred ccccCCChh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEE-eCCCCCCCcceEEEEeccCCCCCc
Q 038499 350 ERESGGTPQ-VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKI-LGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 350 ~r~~~gtp~-i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v-~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
.. .+++. +.....+++..+ .+ ..+.+ ++..++++++.+.|++++++++ +.+ +..+++++.+.. .
T Consensus 234 -~~-~~~~~~~~~~~~~~~~~l-~~--~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~-~---- 299 (353)
T PLN02721 234 -TL-GGGMRQVGVLAAAALVAL-QE--NVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAA---VETNIVYFDITD-G---- 299 (353)
T ss_pred -hc-CCCeehhHHHHHHHHHHH-HH--HHHHH-HHHHHHHHHHHHHHHhCCCcEEecCC---ccceEEEEEccC-C----
Confidence 00 11111 111111111111 11 12222 3335567889999988888865 433 234555555432 1
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
...+...+++.|. ..||.++++. ++++|++++++++
T Consensus 300 ----------~~~~~~~~~~~L~-~~gi~v~~~~---------------------------------~~~lR~~~~~~~~ 335 (353)
T PLN02721 300 ----------SRITAEKLCKSLE-EHGVLLMPGN---------------------------------SSRIRVVTHHQIS 335 (353)
T ss_pred ----------ccccHHHHHHHHH-hCCcEEecCC---------------------------------CceEEEEecCcCC
Confidence 0124678999996 4699998541 4789999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 038499 508 NEEFEFTLEALEFIAI 523 (609)
Q Consensus 508 ~eeid~ll~al~~v~~ 523 (609)
++|+++++++|++++.
T Consensus 336 ~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 336 DSDVQYTLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 100
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=1.5e-22 Score=216.64 Aligned_cols=333 Identities=15% Similarity=0.117 Sum_probs=218.9
Q ss_pred EecCCCC---CC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 80 YADHTAS---GR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 80 yld~~a~---g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
|+|..++ |. .++.|.+++.+.+..+ +.... .+...........++++.+++++|.+ +.++++ +|+.+++.
T Consensus 41 ~id~~~~~~~g~~~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~-~g~~~~~~- 114 (385)
T PRK05958 41 MLNFASNDYLGLARHPRLIAAAQQAARRY-GAGSG-GSRLVTGNSPAHEALEEELAEWFGAE--RALLFS-SGYAANLA- 114 (385)
T ss_pred EEEeeCCCcccCCCCHHHHHHHHHHHHhc-CCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC--cEEEEC-cHHHHHHH-
Confidence 5565544 43 5678999998888643 22111 11112223556788999999999952 245554 78876554
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|++++++|+++...+...|++++.++. .|+++++++++.. .++++
T Consensus 115 ~l~~~---------------~~~gd--~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~--~~~~~ 170 (385)
T PRK05958 115 VLTAL---------------AGKGD--LIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKW--RAGRA 170 (385)
T ss_pred HHHHh---------------CCCCC--EEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhc--cCCCe
Confidence 43443 37888 7999999999999888888999998875 3889999998741 01467
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc---C---CCCCCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID---V---RSGQTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id---~---~~~~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
++++++++|+||.+.|+++|.++|++||+++|+|++++.+..... . ........++++.|+||++|+ .| |++
T Consensus 171 lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G-g~~ 248 (385)
T PRK05958 171 LIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS-SG-AAV 248 (385)
T ss_pred EEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhccc-CC-cEE
Confidence 888888999999999999999999999999999999976533211 0 011111335788999999974 44 888
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI-QMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~-~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+.++++. +.+..... ......+.+++. ..+.+++.+. +. . +.+.++..+++
T Consensus 249 ~~~~~~~--~~~~~~~~----------------------~~~~~~~~~~~~~aa~~aal~~~--~~-~-~~~~~~~~~~~ 300 (385)
T PRK05958 249 LGSETLI--DYLINRAR----------------------PFIFTTALPPAQAAAARAALRIL--RR-E-PERRERLAALI 300 (385)
T ss_pred EcCHHHH--HHHHHhCc----------------------cceecCCCCHHHHHHHHHHHHHH--hc-C-HHHHHHHHHHH
Confidence 8887762 22110000 000111122221 2223344332 21 2 56778888899
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|+++ ++++..+ ..+++++.+.. . .+..++.+.|.+ .||.++++.....+.
T Consensus 301 ~~l~~~L~~~-~~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~l~~-~gI~v~~~~~~~~~~- 356 (385)
T PRK05958 301 ARLRAGLRAL-GFQLMDS----QSAIQPLIVGD-N----------------ERALALAAALQE-QGFWVGAIRPPTVPA- 356 (385)
T ss_pred HHHHHHHHHc-CCCcCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHH-CCceEecccCCCCCC-
Confidence 9999999876 5665433 34566665532 1 245678888866 599998632211110
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++||+++.+++++|+++++++|+++
T Consensus 357 -------------------------~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 357 -------------------------GTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred -------------------------CCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 1368999999999999999999999875
No 101
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.91 E-value=3.5e-22 Score=211.14 Aligned_cols=323 Identities=17% Similarity=0.112 Sum_probs=213.4
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
++.+.+++.+........++ ..+...+++.+.+++.+..|. +++++|++| +|++.++..++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit-~Gs~~ai~~~~~~~~------ 81 (350)
T TIGR03537 15 PPFIRKALIDAVPEVSQYPS------ALGTKALREAISGWFERRFGVKLDPDAQVLPS-AGSKEAIFHFPLVFI------ 81 (350)
T ss_pred CHHHHHHHHHHHhccCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-CChHHHHHHHHHHHc------
Confidence 55677777665432211111 112234444555555544574 443378888 899999999887763
Q ss_pred HHHHHHhhhcCCC-ceEEEECCCCccchHHHHHHcCceEEEEecCC-C-CCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 168 LREKLIKCLRDEE-RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-D-GLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 168 ~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
++|| ...|+++.+.|+.+...++..|++++.++++. + ..+|++++++++. ++++++++++++|
T Consensus 82 ---------~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----~~~~~i~i~~p~N 147 (350)
T TIGR03537 82 ---------DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-----EETKIVWINYPHN 147 (350)
T ss_pred ---------CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-----hccEEEEEeCCCC
Confidence 5652 12799999999999999999999999999874 3 4589999999987 5799999999999
Q ss_pred ccccccC---HHHHHHHHHHhCCeEEEeccccCCc---ccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhc
Q 038499 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPY---VEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQ 317 (609)
Q Consensus 245 ~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~---~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~ 317 (609)
|||.+.| +++|+++|++||+++|+|++++... ....+.... ....+++.|++|.+|.|+ .+|+++.++++
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~-- 224 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDEKL-- 224 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcC-cCCEEEEeecccccCCccccceeeecCHHH--
Confidence 9999998 7889999999999999999976321 111222211 123477779999997654 48999988776
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
++.+... ......+++...+.+. ...+. +....+.++++.++.++.+.+.|+.
T Consensus 225 ~~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l~-~~~~~~~~r~~l~~~~~~~~~~l~~ 277 (350)
T TIGR03537 225 ISFLRKL------------------------RANFGVASPDFVQAAA--KAAWS-DDNHVLERRKIFKRKRDLFIEFFNK 277 (350)
T ss_pred HHHHHHH------------------------HHhhccCCCHHHHHHH--HHHhC-CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 0111123333333221 12221 2223455667777778888888887
Q ss_pred CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChh
Q 038499 398 NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 398 ~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~ 477 (609)
. ++++..+ ..+.+.+...+ .. .+...+++.|.+ .||.+++|..|...
T Consensus 278 ~-g~~~~~~----~g~~~~~~~~~-~~---------------~~~~~l~~~L~~-~gv~v~~g~~f~~~----------- 324 (350)
T TIGR03537 278 V-GLEYLYP----DATFYLWVKVP-SG---------------IDAKDYALRLLE-NGIVVAPGENFGSG----------- 324 (350)
T ss_pred C-CCcccCC----CeEEEEEEECC-CC---------------CCHHHHHHHHHH-CCEEEcCchhhCCC-----------
Confidence 6 6666543 23554444444 11 356788898876 59999988765311
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
.++++||++. .++++++..++.++.
T Consensus 325 ----------------~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 325 ----------------EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred ----------------CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 1489999985 578999998888764
No 102
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.6e-22 Score=213.66 Aligned_cols=328 Identities=15% Similarity=0.073 Sum_probs=219.3
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
..+.|+.+..+ +.++.+.+++.+.+...+..+.. ...++|+.|+++++.+++ +|+++ +|++++|..
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-----------~~~~Lr~~ia~~~~~~~~-~I~it-~G~~~~l~~ 99 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-----------ENHDLRHALAAHHGVAPE-NIMVG-EGIDGLLGL 99 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----------ccHHHHHHHHHHhCCCHH-HEEEc-CCHHHHHHH
Confidence 34567666544 45667888887665322111111 145799999999999876 89998 899999999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|++..+.|+.+...+...|++++.++.+.++ +|++++++++.. ++++
T Consensus 100 ~~~~~---------------~~~gd--~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~----~~~~ 157 (369)
T PRK08153 100 IVRLY---------------VEPGD--PVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR-EDLDALLDAARR----ENAP 157 (369)
T ss_pred HHHHh---------------cCCCC--EEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-CCHHHHHHHhcc----cCCc
Confidence 88876 37888 79999999999888888899999999987664 799999887753 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGIL 309 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L 309 (609)
++++++|+||||.+.+.+++.++++.+ ++++|+|+++..-.. ...+... ....+++.|++|.+|.|+ .+|++
T Consensus 158 ~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~ 235 (369)
T PRK08153 158 LVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTD--DPNVIRMRTFSKAYGLAGARVGYA 235 (369)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhc--CCCEEEEecchHhccCcchheeee
Confidence 999999999999999998887777654 899999999653211 1111111 122477889999998443 58999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++++++ ++.+... .. ..+.+.+.+. ++.+ .+.+....+.+.+..++.++
T Consensus 236 v~~~~~--~~~l~~~------------------------~~--~~~~s~~~q~--~~~~-~l~~~~~~~~~~~~~~~~r~ 284 (369)
T PRK08153 236 IGAPGT--IKAFDKV------------------------RN--HFGMNRIAQA--AALA-ALKDQAYLAEVVGKIAAARD 284 (369)
T ss_pred ecCHHH--HHHHHHh------------------------hc--CCCCCHHHHH--HHHH-HhcCHHHHHHHHHHHHHHHH
Confidence 998877 2222110 00 0122222221 1112 22222234566677777888
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec-cCcccCChhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR-GGCACAGPYG 468 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~-~G~~ca~p~~ 468 (609)
++.+.|++. ++.+. + ..+++.+...+ .. ......+.+.|.+ .||.++ +|.. .
T Consensus 285 ~~~~~L~~~-g~~~~-p----~~~~f~~~~~~-~~--------------~~~a~~l~~~l~~-~Gi~v~~p~~~-~---- 337 (369)
T PRK08153 285 RIAAIARAN-GLTPL-P----SATNFVAIDCG-RD--------------GAFARAVLDGLIA-RDIFVRMPGVA-P---- 337 (369)
T ss_pred HHHHHHHHC-CCccC-C----CcCcEEEEECC-CC--------------cccHHHHHHHHHH-CCeEEeeCCCC-C----
Confidence 888888765 56543 2 12333333322 10 0245677887765 599996 3210 0
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
.++++||+++ +++|+++++++|+++....++
T Consensus 338 -------------------------~~~~iRis~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 338 -------------------------LDRCIRVSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred -------------------------CCCeEEEecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 1479999997 899999999999999876654
No 103
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=1.7e-22 Score=216.55 Aligned_cols=334 Identities=13% Similarity=-0.004 Sum_probs=217.1
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.|+.+.+++.+.+.+. .. .|....+..++++.+.+++.+..|. +++++|++| +|++.++..++..+
T Consensus 40 ~p~~~~~~~~~~~~~~----~~-~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~~------ 107 (387)
T PRK08912 40 GPEDVRRAAADALLDG----SN-QYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVT-SGATEALAAALLAL------ 107 (387)
T ss_pred CCHHHHHHHHHHHhcC----CC-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEe-CCcHHHHHHHHHHh------
Confidence 3556777766655321 11 1212222344555555555555564 343378998 78888898877765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|+++.+.|+.+...++..|++++.++++. ++.+|+++|++++. ++++++++++++||
T Consensus 108 ---------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~NP 171 (387)
T PRK08912 108 ---------VEPGD--EVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-----PRTKAVLLNNPLNP 171 (387)
T ss_pred ---------cCCCC--EEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-----ccceEEEEeCCCCC
Confidence 37888 699999999999888899999999999875 57899999999987 57899999999999
Q ss_pred cccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCC-CCcEEEEEechhh
Q 038499 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGP-GSPGILLMTKALY 316 (609)
Q Consensus 246 TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~ 316 (609)
||.+.+ +++|.++|++|++++|+|++++... ....+.... ..+.++++.|++|.+|-| ..+|++++++++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~- 250 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPL- 250 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHH-
Confidence 999988 5668999999999999999975211 111111110 124578999999999833 349999999887
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.+... ......+++...+. ++...+.......+.++++.++.++++.+.|+
T Consensus 251 -~~~l~~~------------------------~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 303 (387)
T PRK08912 251 -LRVLAKA------------------------HQFLTFTTPPNLQA--AVAYGLGKPDDYFEGMRADLARSRDRLAAGLR 303 (387)
T ss_pred -HHHHHHH------------------------HhhccccCChHHHH--HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322111 00001122222221 11111111112245667778888889999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
.+ ++.+..+ ..+.+.+...+ .. +...+...+++.|.++.||.+.+|..|.+...
T Consensus 304 ~~-g~~~~~~----~g~~~l~~~l~-~~------------~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~-------- 357 (387)
T PRK08912 304 RI-GFPVLPS----QGTYFLTVDLA-PL------------GLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDP-------- 357 (387)
T ss_pred hC-CCcccCC----CcceEEEeccc-cc------------CCCCCHHHHHHHHHhcCCEEEecchhhCCCCC--------
Confidence 87 6776654 23444444333 10 01135667888876667999998876542100
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++|+||+++. .+++++..++.|+..+.
T Consensus 358 -----------------~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 358 -----------------VTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred -----------------CCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 14899999984 57888888888877654
No 104
>PLN02187 rooty/superroot1
Probab=99.91 E-value=5e-22 Score=216.82 Aligned_cols=348 Identities=12% Similarity=0.054 Sum_probs=222.6
Q ss_pred CCceEEecCCCCC-----CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------CCCCCcEE
Q 038499 75 KRRLTYADHTASG-----RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------GGQEDAMI 143 (609)
Q Consensus 75 ~~~~vyld~~a~g-----~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------~~~~~~vi 143 (609)
.+++++|..+-.. +.++.+++++.+.+..- ... .|....+ ..++|+.++++++ .+++ +|+
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~---~~~-~Y~~~~G----~~~lR~aiA~~~~~~~~~~~~~~-~I~ 135 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSG---KGN-SYGPGAG----ILPARRAVADYMNRDLPHKLTPE-DIF 135 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCC---CCC-CCCCCCC----hHHHHHHHHHHHHHhcCCCCCcc-cEE
Confidence 4678888877332 34567888887766521 111 1111112 4456666666663 4665 899
Q ss_pred EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CCCCCCHHHH
Q 038499 144 FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DDGLLDIEAL 221 (609)
Q Consensus 144 ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~g~ld~e~L 221 (609)
+| +|++++|..++.++ +++|| .|+++.+.|+.+...++..|++++.+++. .++.+|+++|
T Consensus 136 it-~G~~~al~~~~~~l---------------~~pGd--~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l 197 (462)
T PLN02187 136 LT-AGCNQGIEIVFESL---------------ARPNA--NILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGI 197 (462)
T ss_pred Ee-CCHHHHHHHHHHHh---------------cCCCC--EEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHH
Confidence 98 89999999998887 37899 69999999999888888899999999874 3578999999
Q ss_pred HHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEE
Q 038499 222 RSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFL 294 (609)
Q Consensus 222 ~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~ 294 (609)
+++++ ++++++++++|+||||.+.+ +++|+++|++||+++|+|+++..-. ....+........-+++.
T Consensus 198 ~~~~~-----~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~ 272 (462)
T PLN02187 198 EAIAD-----ENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLA 272 (462)
T ss_pred HHhcC-----CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEe
Confidence 99887 57899999999999999988 6778899999999999999976311 111222221111246777
Q ss_pred cCCCCCCCCC-CcEEEEEec-h-hhc-cCCCCCCccCCCceEeecccccccccccccccccccC--CChhHHHHHHHHHH
Q 038499 295 STHKFLGGPG-SPGILLMTK-A-LYQ-LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG--GTPQVIQMIRAALA 368 (609)
Q Consensus 295 S~hK~lggp~-g~G~L~~~~-~-~~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~--gtp~i~~~~~aal~ 368 (609)
|++|.++.|+ .+|++++.+ + ... ++.+... ...... +.+.+.+.+ +.+
T Consensus 273 SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~Q~a--~~~ 326 (462)
T PLN02187 273 GISKGWVVPGWKIGWIALNDPEGVFETTKVLQSI------------------------KQNLDVTPDPATIIQAA--LPA 326 (462)
T ss_pred cchhhcCCccceeEEEEecCchhHHHHHHHHHHH------------------------HHhccccCCCCHHHHHH--HHH
Confidence 9999988664 599999842 2 100 0111000 000111 122333321 122
Q ss_pred HHHHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHH
Q 038499 369 FWVKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVA 446 (609)
Q Consensus 369 ~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 446 (609)
+ +.+ ....+.+++..++.++++.+.|++++++..... +..+++.|.-.+... .....+..+++
T Consensus 327 ~-L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~---P~gg~fl~~~l~~~~-----------~~~~~~~~~~~ 391 (462)
T PLN02187 327 I-LEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKK---PESCTYLLTKLELSL-----------MDNIKDDIDFC 391 (462)
T ss_pred H-HhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCC---CCEeEEEEeecChhh-----------CCCCCCHHHHH
Confidence 2 221 123456667777788889999988765432211 233455554322000 00001344555
Q ss_pred HHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 447 TLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 447 ~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
..|..+.||.+++|..|. .++|+||+++ ..++.++..++.|..+++...
T Consensus 392 ~~ll~~~gV~v~pG~~fg-----------------------------~~~~iRis~~--~~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 392 VKLAREENLVFLPGDALG-----------------------------LKNWMRITIG--VEAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred HHHHhhCCEEEECccccC-----------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 555456799999887653 1489999998 468889999999998886543
No 105
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=8.4e-22 Score=212.19 Aligned_cols=346 Identities=12% Similarity=0.048 Sum_probs=220.7
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG---GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g---~~~~~~vift~sGttaal 153 (609)
++.|..+... ..++.+.+++.+.+... ....|. ..+...+++.+.+++.+..| .+++++|++| +|++++|
T Consensus 46 ~i~L~~g~p~~~~~~~~~~~l~~~~~~~----~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it-~Gs~~al 119 (410)
T PRK06290 46 LIDMGVGEPDEMADESVVEVLCEEAKKP----ENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS-IGSKPAL 119 (410)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCC----CCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEc-cCHHHHH
Confidence 4444433322 23455677776544311 110111 11233444444444444445 3343368888 8999999
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~ 231 (609)
..++.++ +++|| .|+++.+.|+.+...++..|++++.++++++ +.+|++++++++.
T Consensus 120 ~~~~~~~---------------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~----- 177 (410)
T PRK06290 120 AMLPSCF---------------INPGD--VTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK----- 177 (410)
T ss_pred HHHHHHh---------------CCCCC--EEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-----
Confidence 9988876 37888 7999999999988888899999999999753 5679999999887
Q ss_pred CCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc---ccccCCCCC-CCCccEEEEcCCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY---VEIDVRSGQ-TDGYDAIFLSTHKFLGGPG 304 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~---~~id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (609)
++++++++++|+||||.+.+. ++|.++|++||+++++|+++.... .+..+.... ..+.++++.|++|.+|.|+
T Consensus 178 ~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~G 257 (410)
T PRK06290 178 EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTG 257 (410)
T ss_pred ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCch
Confidence 579999999999999999995 678888999999999999976421 111221111 1235688899999997554
Q ss_pred -CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 305 -SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 305 -g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.+|++++++++ ++.+... ......+++.+.+. ++.. ++.+....+.++++
T Consensus 258 lRiG~ii~~~~l--~~~l~~~------------------------~~~~~~~~~~~~q~--aa~~-~l~~~~~~~~~~~~ 308 (410)
T PRK06290 258 WRLAFVVGNELI--VKAFATV------------------------KDNNDSGQFIAIQK--AGIY-ALDHPEITEKIREK 308 (410)
T ss_pred hheEeEEeCHHH--HHHHHHH------------------------HhccccCCcHHHHH--HHHH-HhhCcHHHHHHHHH
Confidence 48999998877 3222110 00011222223332 2222 22222224566777
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.++.++++.+.|.+. ++.+..+ ..+++.|...+.... ..-...+...+++.|.+..+|.+.+|..|
T Consensus 309 ~~~~~~~l~~~L~~~-g~~~~~p----~g~f~l~v~lp~~~~---------~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~ 374 (410)
T PRK06290 309 YSRRLDKLVKILNEV-GFKAEMP----GGTFYLYVKAPKGTK---------SGIKFENAEEFSQYLIKEKLISTVPWDDA 374 (410)
T ss_pred HHHHHHHHHHHHHhC-CCeecCC----CeeeEEEEECCCccc---------cCCCCCCHHHHHHHHHHhCCEEEECCccc
Confidence 777888888999887 7776644 335555544430110 00001256788898887756666554321
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHhc
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP-YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~-~~~t~eeid~ll~al~~v~~~~ 525 (609)
++++||+++ .-.++++.++++++|++.+.+.
T Consensus 375 -------------------------------~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 375 -------------------------------GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred -------------------------------cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 379999995 4458899999999999988664
No 106
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=3.8e-22 Score=215.09 Aligned_cols=345 Identities=16% Similarity=0.087 Sum_probs=225.8
Q ss_pred CceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
+-+.|++|...|. ..+.|.+++.+++..+..+.+. +...........++++.+++++|.+ ..++|+ +|+++ ..
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~-SG~~A-n~ 119 (406)
T PRK13393 46 EVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGG--TRNISGTNHYHVLLEAELADLHGKE--AALLFT-SGYVS-NW 119 (406)
T ss_pred cEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcc--cccccCChHHHHHHHHHHHHHhCCC--cEEEeC-CcHHH-HH
Confidence 3466777777787 4677999999988764222221 2222223456788999999999973 245555 88875 44
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++..+.. ..+|+ +|++...+|.++..+++..|++++.++.+ |++++++.++... .+++
T Consensus 120 ~ai~~l~~-------------~~~g~--~I~~~~~~H~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~-~~~~ 178 (406)
T PRK13393 120 AALSTLGS-------------RLPGC--VILSDELNHASMIEGIRHSRAEKRIFRHN-----DPADLERKLSDLD-PHRP 178 (406)
T ss_pred HHHHHhhc-------------CCCCC--EEEEccchhHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHhcc-CCCC
Confidence 44443320 12566 78888899999999999899988877643 7888888776321 1367
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc-cc--cCCC-C-CCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-EI--DVRS-G-QTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~-~i--d~~~-~-~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
++|++++++|++|.+.|+++|.++|++||+++++|++|+.|.. +. .+.. . ....+|+++.++.|.+|+++ |++
T Consensus 179 ~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~ 256 (406)
T PRK13393 179 KLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYI 256 (406)
T ss_pred EEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC--cee
Confidence 8999999999999999999999999999999999999985542 11 0100 0 01236888889999999654 788
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccC-CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG-GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~-gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+.++++ ++.+..... ...+.. +.|.....+.+++++. +..+ ..+++.+++.
T Consensus 257 ~~~~~~--~~~l~~~~~----------------------~~~~t~~~~p~~~aa~~aaL~~~--~~~~--~~~~~~~~~~ 308 (406)
T PRK13393 257 TGSAAL--CDFIRSFAS----------------------GFIFTTSLPPAVAAGALASVRHL--KASS--AERERHQDRV 308 (406)
T ss_pred eCCHHH--HHHHHHhCc----------------------CceecCccCHHHHHHHHHHHHHH--hhCH--HHHHHHHHHH
Confidence 877776 222211100 000111 2222233344555543 2222 2234556778
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|+++ ++.++.+ ..+++.+.+.. . .....+.+.|.+++||.++++.....|.
T Consensus 309 ~~l~~~L~~~-g~~~~~~----~~~i~~v~~~~-~----------------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~- 365 (406)
T PRK13393 309 ARLRARLDKA-GIPHLPN----PSHIVPVMVGD-P----------------VLCKQISDELLDRYGIYVQPINYPTVPR- 365 (406)
T ss_pred HHHHHHHHHc-CCCcCCC----CCCeEEEEeCC-H----------------HHHHHHHHHHHHhCCEEEEeECCCCCCC-
Confidence 8888888775 5555432 34555554322 1 1346788888776799998643212110
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+.+||+++.++|++|+++++++|++++...
T Consensus 366 -------------------------g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 366 -------------------------GTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -------------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 13689999999999999999999999987653
No 107
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=9.9e-23 Score=221.39 Aligned_cols=295 Identities=17% Similarity=0.089 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 123 VHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 123 ~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
..++|+.++++++. .++++|++| +|++++|..++.++ +++|| .|++..+.|+.+...++.
T Consensus 123 ~~~lr~~ia~~~~~~~~~~~~Iiit-~G~~~al~~~~~~l---------------~~pgd--~Vlv~~P~y~~~~~~~~~ 184 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVAFEIDLT-SGAIDAIERLLCAH---------------LLPGD--SVAVEDPCFLSSINMLRY 184 (431)
T ss_pred CHHHHHHHHHHHhhccCCcCeEEEe-cCcHHHHHHHHHHh---------------CCCCC--EEEEeCCCcHHHHHHHHH
Confidence 34577777777763 333478888 89999999998887 37899 699999999999999999
Q ss_pred cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEe-cccCccccccCHH---HHHHHHHHh-CCeEEEeccccCC
Q 038499 201 SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFS-ACSNVTGIYSDTR---SIARLLHQY-GGFACFDFAASGP 275 (609)
Q Consensus 201 ~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s-~~sn~TG~~~dl~---~I~~la~~~-g~~vivD~A~~~~ 275 (609)
.|++++.|+++++| +|+++|+++++ .++++++++ +++||||.+.+.+ +|.++|++| ++++|+|++++.-
T Consensus 185 ~g~~~~~v~~~~~g-~~~~~l~~~~~-----~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~ 258 (431)
T PRK15481 185 AGFSASPVSVDAEG-MQPEKLERALA-----QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALL 258 (431)
T ss_pred cCCeEEeeccCCCC-CCHHHHHHHHh-----cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhh
Confidence 99999999997665 89999999997 468877776 9999999999976 899999999 9999999986532
Q ss_pred cc-c-ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 276 YV-E-IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 276 ~~-~-id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.. + ...-+. .....+++.|++|.+| | ..+|+++.++++ ++.+.... ...
T Consensus 259 ~~~~~~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~--~~~~~~~~------------------------~~~ 310 (431)
T PRK15481 259 SSSPYHSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDSAT--SARLRLRL------------------------NSG 310 (431)
T ss_pred ccCCCCCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCHHH--HHHHHHHH------------------------hcc
Confidence 10 0 111111 1123578889999999 6 459999998877 22321100 000
Q ss_pred cCCChhHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYI---GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~---g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
..+.+.+.+. ++.. ++.+.. ..+.+++..++.++++.+.|++. ++.+..+ ..+++.|.-.+ .
T Consensus 311 ~~~~s~~~q~--a~~~-~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p----~gg~f~~~~l~-~------ 375 (431)
T PRK15481 311 TQWVSHLLQD--LVYA-CLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSP----GDGLNLWLPLD-T------ 375 (431)
T ss_pred ccCCCHHHHH--HHHH-HHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccC----CCeEEEEEECC-C------
Confidence 0112223322 1222 222211 13456677777788888888876 6654333 34566665554 1
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
+...+++.|.+ .||.+++|..|..+ . ..+++||+++. .+++
T Consensus 376 -----------~~~~~~~~l~~-~gV~v~pg~~f~~~-~-------------------------~~~~iRis~~~-~~~~ 416 (431)
T PRK15481 376 -----------DSQATALTLAK-SGWLVREGEAFGVS-A-------------------------PSHGLRITLST-LNDA 416 (431)
T ss_pred -----------CHHHHHHHHHH-CCcEEecCCccccC-C-------------------------CCCeEEEEcCC-CChH
Confidence 35678888865 69999998876421 0 13689999975 4689
Q ss_pred HHHHHHHHHHHHHH
Q 038499 510 EFEFTLEALEFIAI 523 (609)
Q Consensus 510 eid~ll~al~~v~~ 523 (609)
+++.+++.|.+++.
T Consensus 417 ~i~~~~~~l~~~~~ 430 (431)
T PRK15481 417 EINRLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 108
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=6.2e-22 Score=211.20 Aligned_cols=336 Identities=14% Similarity=0.063 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
...++++.+++++|++ .+++++ |+++++..++.+++ +++|| +|++++++|.++...+...
T Consensus 34 ~~~~le~~la~~~g~~---~~v~~~-sgt~al~lal~al~--------------~~~Gd--~Viv~~~~~~~~~~~~~~~ 93 (379)
T PRK11658 34 KNQALEQAFCQLTGNQ---HAIAVS-SATAGMHITLMALG--------------IGPGD--EVITPSLTWVSTLNMIVLL 93 (379)
T ss_pred hHHHHHHHHHHHhCCC---eEEEEC-CHHHHHHHHHHHcC--------------CCCCC--EEEECCCcHHHHHHHHHHc
Confidence 3688999999999985 456664 45568888888775 47898 7999999999999888899
Q ss_pred CceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc
Q 038499 202 LAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 202 G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
|++++.++++.+ +.+|+++++++++ +++++++ +.|++|...|+++|.++|++||+++++|+|++.+....+
T Consensus 94 G~~~v~vd~~~~~~~~d~~~l~~~i~-----~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~ 165 (379)
T PRK11658 94 GATPVMVDVDRDTLMVTPEAIEAAIT-----PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKG 165 (379)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcc-----cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECC
Confidence 999999999864 5689999999998 6788876 455799999999999999999999999999998765432
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
.. ....+.++++++.+|.+.++.| |+++.+ +++ ..++++....|........+....... ....+.|+..-
T Consensus 166 ~~-~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~----~~~~~~G~n~~ 237 (379)
T PRK11658 166 RH-IGARGTAIFSFHAIKNITCAEG-GLVVTDDDEL--ADRLRSLKFHGLGVDAFDRQTQGRAPQ----AEVLTPGYKYN 237 (379)
T ss_pred ee-cCCCCCEEEeCCCCCcCcccCc-eEEEECCHHH--HHHHHHHHHcCCCcchhhhhcccCCCc----ceeeccccccC
Confidence 11 1123567888889999977654 777765 454 233433332332211100000000000 01223444221
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc--eEEEEeccCCCCCcCCCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA--ILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~--~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
+.-+.|++.+. +..+.+.+.++.+++++++.+.|++++...+..+....+.. .+.+.+.. . .
T Consensus 238 ~~~l~AAl~~~--ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~ 301 (379)
T PRK11658 238 LADINAAIALV--QLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE-E-------------R 301 (379)
T ss_pred cCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC-c-------------c
Confidence 22334554444 33468888999999999999999988654343332111112 22333322 1 0
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhh-----cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL-----LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l-----l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
..++.+++.+.|.+ .||.++..+ .+.+.+.. ...+.+.++++ ....+.+.++..+|++|++
T Consensus 302 ~~~~r~~~~~~L~~-~gI~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~-----------~~~~l~lP~~~~l~~~~~~ 367 (379)
T PRK11658 302 CGISRDALMEALKE-RGIGTGLHF--RAAHTQKYYRERFPTLSLPNTEWN-----------SERICSLPLFPDMTDADVD 367 (379)
T ss_pred ccCCHHHHHHHHHH-CCCCCcccC--cCcccChhhhccCCCCCChHHHHH-----------HhCeEEccCCCCCCHHHHH
Confidence 12467889999965 699876443 21111110 01122233333 2478999999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 513 FTLEALEFIAI 523 (609)
Q Consensus 513 ~ll~al~~v~~ 523 (609)
+++++|+++..
T Consensus 368 ~i~~~i~~~~~ 378 (379)
T PRK11658 368 RVITALQQIAG 378 (379)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 109
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=4.9e-22 Score=214.43 Aligned_cols=335 Identities=16% Similarity=0.126 Sum_probs=217.8
Q ss_pred CCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 84 TASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 84 ~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
-+.++ ++.|.+++.+.+..+..+.+ .+...+.......++++.+++++|.+ . .++|+ +|++++...+..+..
T Consensus 57 lgl~~-~p~v~~a~~~~~~~~~~~~~--~s~~~~g~~~~~~~l~~~la~~~g~~-~-~~~~~-sG~~an~~ai~~l~~-- 128 (407)
T PRK09064 57 LGMGQ-HPKVIEAMIEALDRCGAGAG--GTRNISGTNHYHVELERELADLHGKE-A-ALVFT-SGYVSNDATLSTLAK-- 128 (407)
T ss_pred cCCCC-CHHHHHHHHHHHHHcCCCCC--CcCcCccCHHHHHHHHHHHHHHhCCC-c-EEEEC-cHHHHHHHHHHHHhC--
Confidence 33344 45688999887765422111 12222234667889999999999953 2 56665 888764443322221
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEeccc
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACS 243 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~s 243 (609)
..+++ +|+...+.|.+....++..++++..++. .|+++|++.++.. ..+++++|++++++
T Consensus 129 ------------~~~~~--~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-~~~~~~~v~~~~v~ 188 (407)
T PRK09064 129 ------------LIPDC--VIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAA-DPDRPKLIAFESVY 188 (407)
T ss_pred ------------CCCCC--EEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhc-cCCCCeEEEEeCCC
Confidence 23555 6777888888888888888888876664 3788898888632 11468899999999
Q ss_pred CccccccCHHHHHHHHHHhCCeEEEeccccCCcc-cc--cCCC-CC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-EI--DVRS-GQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 244 n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~-~i--d~~~-~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
|++|.+.|+++|.++|++||+++++|+||+.|.. +. .+.. .. ...+|+++.+++|.+|.+ | |+++.++++ +
T Consensus 189 s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~~~~~--~ 264 (407)
T PRK09064 189 SMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAGSAAL--V 264 (407)
T ss_pred CCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEecCHHH--H
Confidence 9999999999999999999999999999985421 10 1100 00 124689999999999854 3 888888876 2
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ-VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~-i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+.+..... ...+..+.++ ....+.+++++. +.. +..+++.+++++++.+.|++
T Consensus 265 ~~l~~~~~----------------------~~~~t~~~~~~~~~aa~~al~~~--~~~--~~~~~~~~~~~~~l~~~L~~ 318 (407)
T PRK09064 265 DAVRSYAP----------------------GFIFTTSLPPAIAAAALASIRHL--KES--NEERERHQERAAKLKAALDA 318 (407)
T ss_pred HHHHHhCc----------------------cccccCcCCHHHHHHHHHHHHHH--hcC--HHHHHHHHHHHHHHHHHHHH
Confidence 22211100 0001122232 222233444443 222 34457788889999999987
Q ss_pred CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChh
Q 038499 398 NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 398 ~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~ 477 (609)
+ +++++.+ ..+++.+.+.. . .....+.+.|.++.||.+++......|.
T Consensus 319 ~-g~~~~~~----~~~iv~i~~~~-~----------------~~~~~l~~~L~~~~gi~v~~~~~p~~~~---------- 366 (407)
T PRK09064 319 A-GIPVMPN----ESHIVPVMVGD-P----------------EKCKKASDMLLEEHGIYVQPINYPTVPR---------- 366 (407)
T ss_pred c-CCCCCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHHhCCEEEeeECCCCCCC----------
Confidence 6 6766543 24555554432 1 1356788888666799998532111110
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+++||+++.++|++|+++++++|++++.+
T Consensus 367 ----------------~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 367 ----------------GTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred ----------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999998765
No 110
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=3.9e-22 Score=200.87 Aligned_cols=333 Identities=16% Similarity=0.120 Sum_probs=242.8
Q ss_pred CChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccch
Q 038499 88 RSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
+.|+.|.+++.+.+..- ||.| ....++...+.++.++.++.... +.|+|+ .|..-+|..+++.+.
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~--------~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~-p~VVpgi~~~I~~~T---- 104 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYP--------YGSDELYAAIAHWFKQRHQWEIKPEWIVFV-PGVVPGISLAIRALT---- 104 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCC--------CCCHHHHHHHHHHHHHhcCCCCCcceEEEc-CcchHhHHHHHHHhC----
Confidence 67889999999887642 3333 33456788899999999886532 267887 677778999999885
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CC--CCCHHHHHHHHhhhccCCCceEEEEecc
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DG--LLDIEALRSKLELYKDAKRPILGSFSAC 242 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g--~ld~e~L~~al~~~~~~~~~~lv~~s~~ 242 (609)
++||. |++..+.|+.........|.+++..|+-. ++ .+|.++|++++.. ++++++++|+|
T Consensus 105 -----------~~gd~--Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~----~~vkl~iLCnP 167 (388)
T COG1168 105 -----------KPGDG--VVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD----ERVKLFILCNP 167 (388)
T ss_pred -----------cCCCe--eEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc----CCccEEEEeCC
Confidence 89994 77777788888888888999999999863 44 6799999999985 67899999999
Q ss_pred cCccccccC---HHHHHHHHHHhCCeEEEeccccC----CcccccCCCCCCC--CccEEEEcCCCCCCCCC-CcEEEEEe
Q 038499 243 SNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVEIDVRSGQTD--GYDAIFLSTHKFLGGPG-SPGILLMT 312 (609)
Q Consensus 243 sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~----~~~~id~~~~~~~--~~D~v~~S~hK~lggp~-g~G~L~~~ 312 (609)
+||||.+.. +.+|+++|.+||+.+|.|+.|+- |+..+.+..+... ..-+.+.|++|.|.-++ .++.+++.
T Consensus 168 HNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~ 247 (388)
T COG1168 168 HNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIIS 247 (388)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEec
Confidence 999999955 67789999999999999999873 3333443333222 33567778999997553 37777777
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
++..+ .+ |+... .+...+.++.+++++.-.++. +.....+.+.++.+.+++++.
T Consensus 248 n~~lr-~~-----------------------~~~~l-~~~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~N~~~~~ 301 (388)
T COG1168 248 NRELR-AK-----------------------FLKRL-KRNGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKDNRDYVA 301 (388)
T ss_pred CHHHH-HH-----------------------HHHHH-HHhcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHH
Confidence 66521 11 11111 122345677777765544443 233456888999999999999
Q ss_pred HHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 393 ERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 393 ~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
+.+.+ +|++++..++ ...+.++-|.-.+ ++.+.+.+.|+++.+|.+..|..|+..
T Consensus 302 ~~l~~~~P~v~v~~p~-gTYL~WLD~r~l~------------------l~d~~l~~~ll~~akVal~~G~~FG~~----- 357 (388)
T COG1168 302 DFLNKHLPGVKVTEPQ-GTYLAWLDCRELG------------------LDDSELAEFLLEEAKVALSPGSTFGEE----- 357 (388)
T ss_pred HHHHhhCCCcEEecCC-CceeeeeeccccC------------------CChHHHHHHHHHhhcEeccCCCccCcC-----
Confidence 99975 7999999874 2333333333333 677899999999999999999876621
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..|++|++++ ++.+-++..++.|+..+..
T Consensus 358 ----------------------g~gf~RlN~a--cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 358 ----------------------GSGFVRLNFA--CPRAILEEALERLKRALKK 386 (388)
T ss_pred ----------------------CCceEEEecC--CCHHHHHHHHHHHHHHHhc
Confidence 2599999998 6888888888888866543
No 111
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=5.3e-22 Score=218.35 Aligned_cols=352 Identities=14% Similarity=0.022 Sum_probs=216.6
Q ss_pred cCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------CCCCCcEEEeCChHHHHHHH
Q 038499 82 DHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------GGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 82 d~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------~~~~~~vift~sGttaal~~ 155 (609)
|.++....|..+.+++.+.+..... ....|.. .....++|+.|+++++ .+++ +|++| +|+++++..
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~~--~~~~Y~~----~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga~~al~~ 153 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIGG--GTGAYTD----SAGYPFVRKAVAAFIERRDGVPKDPS-DIFLT-DGASSGIKL 153 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCCC--cccCcCc----ccCCHHHHHHHHHHHHHhcCCCCChh-hEEEc-CCHHHHHHH
Confidence 4445555677788877655443211 1111222 2224456666666653 4454 89998 899999999
Q ss_pred HHHHhcccchhhHHHHHHhhh-cCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhcc-C
Q 038499 156 LQEVMGIAVPSILREKLIKCL-RDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKD-A 231 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~-~ 231 (609)
++.++ + ++|| .|+++.+.|+.+...++..|++++.+++++ ++.+|+++|+++++.... .
T Consensus 154 ~~~~l---------------~~~~gD--~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 216 (481)
T PTZ00377 154 LLQLL---------------IGDPSD--GVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNG 216 (481)
T ss_pred HHHHh---------------ccCCCC--EEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcC
Confidence 98876 3 5888 799999999999999999999999999875 347999999999873111 1
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC-c----ccccCC----CCCCC---C-ccEEEEc
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-Y----VEIDVR----SGQTD---G-YDAIFLS 295 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~----~~id~~----~~~~~---~-~D~v~~S 295 (609)
.+++++++++|+||||.+++ +++|+++|++||+++|+|+++..- + ....+. .+... + .-+++.|
T Consensus 217 ~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S 296 (481)
T PTZ00377 217 ITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHS 296 (481)
T ss_pred CCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEec
Confidence 27898889999999999998 678999999999999999996531 1 001110 11000 0 1256679
Q ss_pred CCCCC-CCC-CCcEEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 296 THKFL-GGP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 296 ~hK~l-ggp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
++|.+ +-| ..+|++++ ++++ ++.+... . ....+++.+.+.+.+ . .
T Consensus 297 ~SK~~~~~~GlRiG~~~~~~~p~~l--i~~l~~~------------------------~-~~~~~~~~~~Q~a~~--~-~ 346 (481)
T PTZ00377 297 TSKGIIGECGRRGGYFELTNIPPEV--REQIYKL------------------------A-SINLCSNVVGQLMTG--L-M 346 (481)
T ss_pred CCcccccCCcCceEEEEEeCCCHHH--HHHHHHH------------------------h-heecCCChHHHHHHH--H-H
Confidence 99975 422 34899987 6666 2222111 0 001122233332211 1 1
Q ss_pred HHH---hc--------CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 371 VKE---YI--------GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 371 ~~~---~~--------g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
+.. .. ..+.+.++.++.++.+.+.|.+++++.+..+ ..+++.|.-..-+.... ....+..
T Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p----~gg~fl~~~~~l~~~~~-----~~~~~~~ 417 (481)
T PTZ00377 347 CNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPV----EGAMYAFPRIELPEKAI-----QEAKERG 417 (481)
T ss_pred hCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecC----CeeEEEEeeccCchhhH-----HHHHhcC
Confidence 110 00 1122233446677888899988888888755 34555553221000000 0000000
Q ss_pred C-ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 440 L-HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 440 l-~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
+ ...+++..+.++.||.+.+|..|.... .++++|||+. .++++++..++.|
T Consensus 418 ~~~~~~~~~~ll~~~gV~v~pG~~F~~~~--------------------------~~~~~Rls~~--~~~e~l~~~l~rl 469 (481)
T PTZ00377 418 LAPDVLYCLELLESTGIVVVPGSGFGQKP--------------------------GTYHFRITIL--PPEEQIEEMVKKI 469 (481)
T ss_pred CCcHHHHHHHHHHHcCEEEeCCcccCCCC--------------------------CCCEEEEEEC--CCHHHHHHHHHHH
Confidence 1 123444455566799999998775210 1479999998 6788999999999
Q ss_pred HHHHHhc
Q 038499 519 EFIAIYG 525 (609)
Q Consensus 519 ~~v~~~~ 525 (609)
+.+++..
T Consensus 470 ~~~~~~~ 476 (481)
T PTZ00377 470 KEFHESF 476 (481)
T ss_pred HHHHHHH
Confidence 9887653
No 112
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=6.5e-22 Score=213.70 Aligned_cols=330 Identities=15% Similarity=0.047 Sum_probs=215.3
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------------CCCCCcEEEeCChHHHHHHHH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------------GGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------------~~~~~~vift~sGttaal~~l 156 (609)
+++.+.+++.+.+.. .....|....+ ..++|+.|+++++ .+++ +|++| +|+++++..+
T Consensus 51 p~~~~~~a~~~~~~~----~~~~~Y~~~~G----~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-~i~it-~G~~~al~~~ 120 (412)
T PTZ00433 51 TPAIQTKALVEAVDS----QECNGYPPTVG----SPEAREAVATYWRNSFVHKESLKSTIKKD-NVVLC-SGVSHAILMA 120 (412)
T ss_pred CCHHHHHHHHHHhhc----CCCCCCCCCCC----cHHHHHHHHHHHHhhccccccccCCCChh-hEEEe-CChHHHHHHH
Confidence 567788888776542 11111111111 3456666666664 4454 89998 8999999999
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~ 234 (609)
+..+ +++|| .|+++.+.|+.+...++..|++++.+++++ ++.+|+++|+++++ +++
T Consensus 121 ~~~~---------------~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-----~~~ 178 (412)
T PTZ00433 121 LTAL---------------CDEGD--NILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-----DRT 178 (412)
T ss_pred HHHh---------------cCCCC--EEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-----cCc
Confidence 8877 37888 699999999999888999999999999864 46799999999887 578
Q ss_pred eEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---c-ccCCCCCCCCccEEEEcCCCCCCCCC-Cc
Q 038499 235 ILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---E-IDVRSGQTDGYDAIFLSTHKFLGGPG-SP 306 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~-id~~~~~~~~~D~v~~S~hK~lggp~-g~ 306 (609)
+++++++++||||.+.+ +++|+++|++||+++|+|+++..... . ..+..+.....-+++.|++|.+|.|+ .+
T Consensus 179 ~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRl 258 (412)
T PTZ00433 179 KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRL 258 (412)
T ss_pred eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeE
Confidence 99999999999999877 56678999999999999999763211 1 11112111112366779999997664 59
Q ss_pred EEEEEe------chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH-HhcCHHH
Q 038499 307 GILLMT------KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK-EYIGHEV 379 (609)
Q Consensus 307 G~L~~~------~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~-~~~g~~~ 379 (609)
|++++. +++ ++.+... .....+++.+.+.+ +..++.. .....+.
T Consensus 259 G~~i~~~p~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~q~a--~~~~l~~~~~~~~~~ 309 (412)
T PTZ00433 259 GWLLLVDPHGNGGDF--LDGMKRL-------------------------GMLVCGPCSVVQAA--LGEALLNTPQEHLEQ 309 (412)
T ss_pred EEEEEeCCcccHHHH--HHHHHHH-------------------------hhccCCCChHHHHH--HHHHHhcCcHHHHHH
Confidence 999972 223 1111000 00011233333322 2222211 0123456
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
++++.++.++.+.+.|+...++.+..+ ..+++.|...+ ... -....+..++++.|.+++||.+++
T Consensus 310 ~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~f~~~~l~-~~~----------~~~~~~~~~~~~~ll~~~gV~v~p 374 (412)
T PTZ00433 310 IVAKLEEGAMVLYNHIGECIGLSPTMP----RGSMFLMSRLD-LEK----------FRDIKSDVEFYEKLLEEENVQVLP 374 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcccCC----CeeEEEEEEec-hhh----------cCCCCCHHHHHHHHHHhcCEEEeC
Confidence 667777788888899987666665443 34555554333 100 000013567788877667999998
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|..|. .++++||+++. .+++++..++.|..+++.-
T Consensus 375 g~~f~-----------------------------~~~~iRis~~~--~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 375 GEIFH-----------------------------MPGFTRLTISR--PVEVLREAVERIKAFCERH 409 (412)
T ss_pred ccccC-----------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 87653 14799999984 5888999999998887643
No 113
>PRK08068 transaminase; Reviewed
Probab=99.91 E-value=5.5e-22 Score=212.71 Aligned_cols=338 Identities=11% Similarity=0.059 Sum_probs=213.7
Q ss_pred ceEEecCCC-CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTA-SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a-~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
+++.|+.+. ..+.++.+.+++.+.+... ....|....+..++++.+.+++.+..| .+++++|++| +|+++++
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it-~G~~~~l 107 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENP----ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAIL-FGGKAGL 107 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEc-CCcHHHH
Confidence 345555443 2334566777777765431 110111111223344444444433346 3443368887 7777788
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|+++.+.|+.+...++..|++++.+++++ +..+|++++++++.
T Consensus 108 ~~~~~~~---------------~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~----- 165 (389)
T PRK08068 108 VELPQCL---------------MNPGD--TILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA----- 165 (389)
T ss_pred HHHHHHh---------------CCCCC--EEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-----
Confidence 8877766 37888 699999999999888899999999999975 34689999999887
Q ss_pred CCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCC-c---ccccCCCC-CCCCccEEEEcCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGP-Y---VEIDVRSG-QTDGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~-~---~~id~~~~-~~~~~D~v~~S~hK~lggp 303 (609)
++++++++++|+||||.+.+. ++|+++|++|++++|+|+++..- + .+..+... ......+++.|++|.+|.|
T Consensus 166 ~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 166 EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA 245 (389)
T ss_pred ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence 578999999999999999986 46788899999999999997421 1 11121111 0112357888999999755
Q ss_pred C-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHH
Q 038499 304 G-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 304 ~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~ 382 (609)
+ .+|+++.++++ ++.+... ......+++...+. ++..++.......+.+++
T Consensus 246 GlRiG~~~~~~~l--~~~l~~~------------------------~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~ 297 (389)
T PRK08068 246 GWRVAFAVGNESV--IEAINLL------------------------QDHLFVSLFGAIQD--AAIEALLSDQSCVAELVA 297 (389)
T ss_pred cceeEeEecCHHH--HHHHHHH------------------------HhhccCCCChHHHH--HHHHHHhCcHHHHHHHHH
Confidence 3 59999998887 3332111 01111233333332 222222212223456677
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.++.++++.+.|+.+ ++.+..+ ..+++.+...+ +. ++...+++.|.++.||.+++|..
T Consensus 298 ~~~~~r~~~~~~L~~~-g~~~~~~----~g~~~~~v~~~-~~---------------~~~~~~~~~l~~~~gi~v~pg~~ 356 (389)
T PRK08068 298 RYESRRNAFISACREI-GWEVDAP----KGSFFAWMPVP-KG---------------YTSEQFADLLLEKAHVAVAPGNG 356 (389)
T ss_pred HHHHHHHHHHHHHHHC-CCcccCC----CeeEEEEEECC-CC---------------CCHHHHHHHHHHhCCEEEecchH
Confidence 7777888888888876 6665533 34555444443 11 35778989987767999998865
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
+..+ .++++||+++ ..++.+...++.|+
T Consensus 357 f~~~---------------------------~~~~iRi~~~--~~~~~l~~al~~l~ 384 (389)
T PRK08068 357 FGEH---------------------------GEGYVRVGLL--TDEERLREAVERIG 384 (389)
T ss_pred hCcc---------------------------CCCeEEEEEc--CCHHHHHHHHHHHH
Confidence 5311 1479999997 35555555555544
No 114
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.91 E-value=4.3e-22 Score=213.49 Aligned_cols=336 Identities=11% Similarity=0.011 Sum_probs=215.1
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGTT 150 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGtt 150 (609)
++.++.+... +.++.+.+++.+.+.. .....|....+ ..++|+.+++++ | ++++++|++| +|++
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~~I~it-~Gs~ 102 (388)
T PRK07366 32 LIDLSLGSSDLPAPAHALEAIAQSLHD----PSTHGYLLFHG----TLDFREAAAQWYEQRFGLAVDPETEVLPL-IGSQ 102 (388)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhC----cccCCCCCCCC----CHHHHHHHHHHHHHhhCCcCCCcCeEEEC-CCcH
Confidence 4555544333 3366778887766532 11111111112 234555555554 5 4454257777 8999
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhh
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELY 228 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~ 228 (609)
+++..++..+ +++|| .|++..+.|+.+...++..|++++.++++.+ ..+|++++++++.
T Consensus 103 ~al~~~~~~l---------------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-- 163 (388)
T PRK07366 103 EGTAHLPLAV---------------LNPGD--FALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-- 163 (388)
T ss_pred HHHHHHHHHh---------------CCCCC--EEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc--
Confidence 9999998876 37898 6999999999998889999999999999753 4678889988776
Q ss_pred ccCCCceEEEEecccCccccccCHH---HHHHHHHHhCCeEEEeccccCCc----c-cccCCCCCCC-CccEEEEcCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPY----V-EIDVRSGQTD-GYDAIFLSTHKF 299 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A~~~~~----~-~id~~~~~~~-~~D~v~~S~hK~ 299 (609)
.+++++++++++||||.+.+.+ +|+++|++||+++|+|+++.--. . ...+...... ...+++.|++|.
T Consensus 164 ---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 240 (388)
T PRK07366 164 ---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKS 240 (388)
T ss_pred ---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccc
Confidence 5789999999999999998854 57778999999999999965321 1 1112221111 123667899999
Q ss_pred CCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh-hHHHHHHHHHHHHHHHhcCH
Q 038499 300 LGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQMIRAALAFWVKEYIGH 377 (609)
Q Consensus 300 lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~~~aal~~~~~~~~g~ 377 (609)
+|.| ..+|+++.++++ ++.+... ......+++ .+.+. +++.+.......
T Consensus 241 ~g~~GlRiG~~v~~~~l--i~~l~~~------------------------~~~~~~~~~~~~~~~---a~~~l~~~~~~l 291 (388)
T PRK07366 241 YNMGGFRIGFAIGNAQL--IQALRQV------------------------KAVVDFNQYRGILNG---AIAALTGPQATV 291 (388)
T ss_pred cCCcchhheehcCCHHH--HHHHHHH------------------------HhhcccCCCHHHHHH---HHHHHhCcHHHH
Confidence 9755 359999998887 3333111 000111221 22222 222222112235
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 378 EVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 378 ~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
+.+++..++.++++.+.|+++ ++.+..+ ..+++.|.-.+ +. ...+..++++.|.++.||.+
T Consensus 292 ~~~~~~~~~~r~~l~~~L~~~-~~~~~~p----~~g~f~~~~~~-~~-------------~~~~~~~~~~~l~~~~gv~v 352 (388)
T PRK07366 292 QQTVQIFRQRRDAFINALHQI-GWPVPLP----EATMYVWAKLP-EP-------------WQGNSVEFCTQLVAQTGVAA 352 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCC----CeeEEEEEECC-cc-------------cCCCHHHHHHHHHHhCCEEE
Confidence 566777777888888888876 5654333 34555555444 11 00135667776656679999
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
++|..|... .++|+||+++ .++++++..++.|...
T Consensus 353 ~pg~~f~~~---------------------------~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 353 SPGSGFGKS---------------------------GEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred eCchHhCcC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 988765311 1489999997 3688898888888754
No 115
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.91 E-value=4.6e-22 Score=220.67 Aligned_cols=339 Identities=14% Similarity=0.042 Sum_probs=216.9
Q ss_pred ceEEecCCCC----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh------CCCCCCcEEEeC
Q 038499 77 RLTYADHTAS----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL------GGGQEDAMIFCG 146 (609)
Q Consensus 77 ~~vyld~~a~----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~------g~~~~~~vift~ 146 (609)
+++.|+.+.. -+.|+.+.+++.+.+..... |... ....++|+.|++++ +.+++ +|++|
T Consensus 147 ~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~------Y~~~----~G~~~lReaia~~~~~~~~~~~~~~-~I~it- 214 (517)
T PRK13355 147 HILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEG------YSDS----KGLFSARKAIMQYAQLKGLPNVDVD-DIYTG- 214 (517)
T ss_pred CeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCC------CCCC----cChHHHHHHHHHHHHhcCCCCCChh-HEEEe-
Confidence 4667765332 24577788888776643211 1111 12456777777776 56665 89887
Q ss_pred ChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHH
Q 038499 147 SGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSK 224 (609)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~a 224 (609)
+|++++|..++.++ +++|| .|+++.+.|+.+...++..|++++.+++++ ++.+|+++|+++
T Consensus 215 ~G~~eal~~~~~~l---------------~~~Gd--~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 277 (517)
T PRK13355 215 NGVSELINLSMSAL---------------LDDGD--EVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK 277 (517)
T ss_pred CcHHHHHHHHHHHh---------------CCCCC--EEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence 89999999988876 47899 699999999999988899999999998875 467999999999
Q ss_pred HhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCC
Q 038499 225 LELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTH 297 (609)
Q Consensus 225 l~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~h 297 (609)
++ ++++++++++|+||||.+.+ +++|+++|++||+++|+|+++.--. ....+..+..+..-+++.|++
T Consensus 278 ~~-----~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~S 352 (517)
T PRK13355 278 IT-----SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLS 352 (517)
T ss_pred cC-----cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecch
Confidence 97 68999999999999999998 7788999999999999999965211 111111111111223347899
Q ss_pred CCCCCCC-CcEEEEEe--chhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHH
Q 038499 298 KFLGGPG-SPGILLMT--KALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWV 371 (609)
Q Consensus 298 K~lggp~-g~G~L~~~--~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~ 371 (609)
|.++.|+ .+|+++++ +++.. +..+.. ......+.+...+.+ .+++
T Consensus 353 K~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~-------------------------~~~~~~~~~~~~q~a~~~aL---- 403 (517)
T PRK13355 353 KSHMIAGYRIGWMILSGNKRIAKDYIEGLNM-------------------------LANMRLCSNVPAQSIVQTAL---- 403 (517)
T ss_pred hhccCcccceEEEEeeCchhhHHHHHHHHHH-------------------------HhcCcCCcChHHHHHHHHHh----
Confidence 9986543 49999965 33200 000000 000001122222211 1221
Q ss_pred HHhcCH-HHH--HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC-CCChHHHHH
Q 038499 372 KEYIGH-EVI--KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK-PLHGPFVAT 447 (609)
Q Consensus 372 ~~~~g~-~~i--~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~-~l~~~~v~~ 447 (609)
...... +.+ ..+..+.++++.+.|.++|++++..+ ..+++.|.-.+ .. .. ..+..+++.
T Consensus 404 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----~g~fy~~~~l~-~~------------~~~~~~~~~~~~ 466 (517)
T PRK13355 404 GGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKP----KAAFYIFPKID-VK------------KFNIHDDEQFAL 466 (517)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCC----CeeeEEEeecC-cc------------cCCCCCHHHHHH
Confidence 111111 111 12334457888899988888887665 34555554333 10 00 012344554
Q ss_pred HHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 448 LLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 448 ~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.|+++.||.+++|..|..+ .++++||++. .++++++..++.|...++.
T Consensus 467 ~ll~~~gV~v~pg~~F~~~---------------------------~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 467 DLLHDKKVLIVQGTGFNWD---------------------------KPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHHHhCCEEEeCcchhCCC---------------------------CcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 4445679999998766421 2589999995 6889999999999888764
No 116
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.91 E-value=3.4e-22 Score=225.58 Aligned_cols=350 Identities=17% Similarity=0.144 Sum_probs=227.8
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
..++.+.+.++++++++++|.+.. -+..++|+.+.+..++.+.... .+ -....|.+|+++..+|++|.
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh---------~~-~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYH---------RS-RGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHH---------Hh-cCCCCCCEEEecccccccCH
Confidence 556788999999999999999743 3444466655333332211000 00 01122458999999999999
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
.++...|++|+.|+.+++|.+|+++|+++++++ .+++.++.++++++..+...|+++|++++|++|+++++|+|+..+
T Consensus 606 asa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~--~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a 683 (954)
T PRK12566 606 ASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA--GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNA 683 (954)
T ss_pred HHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc--CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhh
Confidence 889899999999999999999999999999732 256778888888888777788999999999999999999999876
Q ss_pred cccccC-CCCCCCCccEEEEcCCCCCCCCCCcEEEEEec-hhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDV-RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~-~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
...++. ..+ |+|++++++||||++|.|.|..++.. .. .+.+.|..+++..+... .. ..+ .
T Consensus 684 ~~~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~vG~iav--~~~L~pfLp~~P~~d~~------G~------~~r-~ 745 (954)
T PRK12566 684 QVGLARPADI---GADVSHMNLHKTFCIPHGGGGPGMGPIGV--RAHLAPFVANHPVVPVE------GP------DPN-N 745 (954)
T ss_pred ccCCCChhhc---CCCEEEecCCcccCcCccCCCCccchhhh--hhhhhhhccCCCCcCCC------CC------CCC-C
Confidence 666652 444 89999999999999897767666655 33 22333444433211100 00 001 1
Q ss_pred CCCh----hHHHHHHHHHHHHHHHhcCHHHHHHHH--HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 354 GGTP----QVIQMIRAALAFWVKEYIGHEVIKKQE--ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 354 ~gtp----~i~~~~~aal~~~~~~~~g~~~i~~~~--~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
..+. +-..++.+++.|+ ...|.+..+... ..+++|+.++|.+..++.. .+.+.....-+.+...+ .
T Consensus 746 ga~S~~~~gsa~~l~~A~~Yi--~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~--l--- 817 (954)
T PRK12566 746 GAVSAAPWGSASILPISWMYI--AMMGPQLADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRP--L--- 817 (954)
T ss_pred CceeecccchHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccc--c---
Confidence 1121 1222234455554 556777334344 6688999999977433333 22111111112222221 0
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
......+..++.+.|.+ +||.+.. ..+ | .++.+||+.+.++|
T Consensus 818 -------~~~~g~~~~dvakRL~d-~Gihapt-~~f--P---------------------------v~~~LmIepTE~es 859 (954)
T PRK12566 818 -------KAQTGISEEDVAKRLMD-YGFHAPT-MSF--P---------------------------VPGTLMVEPTESES 859 (954)
T ss_pred -------ccccCCCHHHHHHHHHH-CCcEEeE-Eee--c---------------------------cCCEEEEEeeeeCC
Confidence 01122566889999985 7997642 111 1 15889999999999
Q ss_pred HHHHHHHHHHHHHHHHhcc--------------cccCCCcccccCCceeec
Q 038499 508 NEEFEFTLEALEFIAIYGQ--------------RFLPLYNFNIKTGTWCFM 544 (609)
Q Consensus 508 ~eeid~ll~al~~v~~~~~--------------~~~p~y~~~~~~~~w~~~ 544 (609)
++|+|+++++|+.+.++.+ +..|.-.-+... +|.|.
T Consensus 860 keEIDrf~eAL~~I~~e~~~v~~g~~~~~~n~l~~apht~~~~~~-~w~~~ 909 (954)
T PRK12566 860 KAELDRFVEAMLSIRAEIGKVQEGNWPAEDNPLKRAPHTLADVTG-VWQRP 909 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcccCcccCCCCchHHhhc-cCCCC
Confidence 9999999999999987643 344555555444 78776
No 117
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=6.7e-23 Score=218.13 Aligned_cols=302 Identities=15% Similarity=0.172 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH--
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-- 199 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-- 199 (609)
..+++++.+++++|++ +.+++ ++|++ ++..++.. +++|| +|++++..|.++...|.
T Consensus 48 ~~~~le~~la~l~g~~--~~l~~-~sG~~-al~~~l~l----------------l~~Gd--~Vl~~~~~y~~~~~~~~~~ 105 (378)
T TIGR01329 48 TRTALESLLAKLDKAD--RAFAF-SSGMA-ALDVITRL----------------LNNGD--EIIAGDDLYGGTDRLLTQV 105 (378)
T ss_pred HHHHHHHHHHHHhCCC--cEEEE-CCHHH-HHHHHHHH----------------hCCCC--EEEEcCCCchHHHHHHHHH
Confidence 3678999999999983 24555 47775 67766553 47898 69999999988776554
Q ss_pred --HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 200 --QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 200 --~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
..|++++.++.+ |+++++++++ ++++++++++++||||.+.|+++|+++||+||+++++|++++.++.
T Consensus 106 ~~~~G~~v~~vd~~-----d~~~le~~i~-----~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~ 175 (378)
T TIGR01329 106 VPRSGVVVVHVDTT-----DLDKVKAALG-----PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL 175 (378)
T ss_pred HHHcCcEEEEeCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 469999999864 8999999997 6899999999999999999999999999999999999999887765
Q ss_pred cccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
...+. . ++|++++|+||+++||.+ .|+++++++.. .+++.+.... .|
T Consensus 176 ~~~l~-~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~-~~~~~~~~~~--------------------------~G 224 (378)
T TIGR01329 176 CNPLE-L---GADIVYHSATKFLAGHSDVMAGVLAVKGEEI-AKKVYFLQNS--------------------------TG 224 (378)
T ss_pred CChhh-c---CCcEEEEecceeccCCccceeEEEEeCcHHH-HHHHHHHHHh--------------------------cC
Confidence 44442 2 789999999999999876 79998866541 1222222110 11
Q ss_pred C-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCC-------------CCCCcceEEEEec
Q 038499 356 T-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNT-------------STKRQAILSFNIH 420 (609)
Q Consensus 356 t-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~-------------~~~r~~~~~f~~~ 420 (609)
. .+.. .+. +.+..........++..+++..+.+.|+++|.+ +++-|. ...+.++++|.+
T Consensus 225 ~~~~~~---~a~--l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~- 298 (378)
T TIGR01329 225 SGLAPF---DCW--LLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET- 298 (378)
T ss_pred CcCCHH---HHH--HHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-
Confidence 1 1100 111 111112234455566666677777777776655 232221 123568999998
Q ss_pred cCCCCCcCCCCCCCCCCCCCC-hHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 421 SSTINSSLGENTKTETDKPLH-GPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~-~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
. + .. ...++..| +.++|.++.|..-+ .|.......+.++... ..|+.++
T Consensus 299 ~-~----------------~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~ 351 (378)
T TIGR01329 299 G-S----------------VALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEVRE---------ERGLPED 351 (378)
T ss_pred C-C----------------HHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHHHH---------hcCCCCC
Confidence 4 2 23 56888888 67899999886432 2322211222222111 2466789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.||||++. |+++.+++-|+..++
T Consensus 352 liR~svGl----E~~~dl~~dl~~al~ 374 (378)
T TIGR01329 352 LVRLSVGI----EDVDDLISDLDIAFV 374 (378)
T ss_pred eEEEEecc----CCHHHHHHHHHHHHH
Confidence 99999996 455556666555554
No 118
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=9e-23 Score=218.04 Aligned_cols=306 Identities=16% Similarity=0.170 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH
Q 038499 118 HTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 118 ~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (609)
.......++++.++++.|++. .+++ ++|+. ++..++.. +++|| .|+++..+|+++...
T Consensus 51 ~~~p~~~~le~~lA~l~g~~~--~v~~-~sG~~-ai~~~l~~----------------l~~Gd--~Vlv~~~~y~~~~~~ 108 (390)
T PRK08064 51 SGNPTREALEDIIAELEGGTK--GFAF-ASGMA-AISTAFLL----------------LSKGD--HVLISEDVYGGTYRM 108 (390)
T ss_pred CCChhHHHHHHHHHHHhCCCC--eEEE-CCHHH-HHHHHHHH----------------hCCCC--EEEEccCccchHHHH
Confidence 334557789999999999873 5666 58876 56655542 47888 699999999877655
Q ss_pred H----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 198 W----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 198 ~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
| +..|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|.++||++|+++++|++++
T Consensus 109 ~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~-----~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~ 178 (390)
T PRK08064 109 ITEVLSRFGIEHTFVDMT-----NLEEVAQNIK-----PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFL 178 (390)
T ss_pred HHHHHHHcCCEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCC
Confidence 4 3479999999864 7899999997 689999999999999999999999999999999999999988
Q ss_pred CCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
.+.....+ .+ ++|+++.|+||+++|+.+ .|++++++ ++ .+.+.+...++
T Consensus 179 ~~~~~~~~-~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~--~~~l~~~~~~~---------------------- 230 (390)
T PRK08064 179 TPLLQKPL-DL---GADVVLHSATKFLAGHSDVLAGLAVVKDEEL--AQKLYFLQNSF---------------------- 230 (390)
T ss_pred cccccCch-hh---CCcEEEeecceeccCCccceeEEEEeCCHHH--HHHHHHHHHhc----------------------
Confidence 76543333 22 789999999999999876 58888865 44 22332222111
Q ss_pred cccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCC-------------CCCCcceEE
Q 038499 351 RESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNT-------------STKRQAILS 416 (609)
Q Consensus 351 r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~-------------~~~r~~~~~ 416 (609)
|...... .+.+. +..........++..+.+..+.+.|+++|.+ +++-+. .....++++
T Consensus 231 ----g~~~~~~--~a~l~--~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s 302 (390)
T PRK08064 231 ----GAVLGVQ--DCWLV--LRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLS 302 (390)
T ss_pred ----CCCCCHH--HHHHH--HcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEE
Confidence 1110000 01111 0111123344455566677777777777655 233321 123566888
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCc---EeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCC
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGI---QARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGY 490 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI---~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~ 490 (609)
|.+.. .+.+.+.+ +..++ .++.|..++ .|.......+..+... .
T Consensus 303 f~~~~--------------------~~~~~~f~-~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~---------~ 352 (390)
T PRK08064 303 FTLQS--------------------EEAVRQFV-SHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERD---------E 352 (390)
T ss_pred EEECC--------------------HHHHHHHH-HhCCcceEcccCCCCcceeECCcccccccCCHHHHH---------h
Confidence 88743 12344444 33455 777773222 0110000011111100 1
Q ss_pred CCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 491 VGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 491 ~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.|+.++.||+|++.+++++.++.+.++|+.+
T Consensus 353 ~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 353 RGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred cCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 2345799999999999999999999999874
No 119
>PRK12414 putative aminotransferase; Provisional
Probab=99.91 E-value=6.1e-22 Score=211.96 Aligned_cols=340 Identities=10% Similarity=-0.026 Sum_probs=219.8
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG--QEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~--~~~~vift~sGttaal~ 154 (609)
.+.|+.+... +.++.+.+++.+.+.. ... .|....+...+++.+++++++++|.+ ++++|++| +|+++++.
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it-~g~~~al~ 104 (384)
T PRK12414 31 ALNLSQGAPNFAPDPALVEGVARAMRD----GHN-QYAPMAGIAALREALAEKTERLYGARYDPASEVTVI-ASASEGLY 104 (384)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHHh----CCC-CcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEE-CChHHHHH
Confidence 4555544332 3466677777665532 111 12222234677788888888888875 33379998 78888898
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~ 233 (609)
.++..+ +.+|| .|+++.+.|..+...++..|++++.+++++ ++.+|+++|+++++ ++
T Consensus 105 ~~~~~l---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----~~ 162 (384)
T PRK12414 105 AAISAL---------------VHPGD--EVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-----PR 162 (384)
T ss_pred HHHHHh---------------cCCCC--EEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-----cc
Confidence 888776 37898 689999999888888888999999999875 56799999999997 57
Q ss_pred ceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCC-C
Q 038499 234 PILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGP-G 304 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp-~ 304 (609)
++++++++++||||.+.+ +++|+++|++||+++++|+++.... ....+.... ..+..+++.|++|.+|.| .
T Consensus 163 ~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl 242 (384)
T PRK12414 163 TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW 242 (384)
T ss_pred cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc
Confidence 999999999999999865 6778899999999999999975311 111122111 112357888999999745 3
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQE 384 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~ 384 (609)
.+|++++++++ ++.+.... .....+++.+.+.+ +.. ++.+......+++..
T Consensus 243 RiG~~v~~~~l--~~~l~~~~------------------------~~~~~~~s~~~q~a--~~~-~l~~~~~~~~~~~~~ 293 (384)
T PRK12414 243 RVGYCLAPAEL--MDEIRKVH------------------------QFMVFSADTPMQHA--FAE-ALAEPASYLGLGAFY 293 (384)
T ss_pred eEEEEecCHHH--HHHHHHHH------------------------hheecCCCcHHHHH--HHH-HhcCChHHHHHHHHH
Confidence 58999999887 33321110 00011222233321 112 222212233456667
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
++.++.+.+.|+++ ++.+..+ ..+++.|...+ .. ......+++..+.++.||.+.+|..|.
T Consensus 294 ~~~r~~l~~~L~~~-g~~~~~~----~gg~~~~~~~~-~~-------------~~~~~~~~~~~~l~~~gV~v~pg~~f~ 354 (384)
T PRK12414 294 QRKRDLLARELAGS-RFELLPS----EGSFFMLARFR-HF-------------SDESDSDFVLRLIRDARVATIPLSAFY 354 (384)
T ss_pred HHHHHHHHHHHHhC-CCeecCC----CcceEEEEccc-cc-------------CCCCHHHHHHHHHHhCCEEEecchhhc
Confidence 77788888888876 6776544 34555553332 10 001244555444456799999987664
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
.+ + ...+++||+++. ++++++..++.|.+
T Consensus 355 ~~-~------------------------~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 355 TD-G------------------------TDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CC-C------------------------CCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 21 0 014799999984 67888887777753
No 120
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.91 E-value=9e-22 Score=210.67 Aligned_cols=300 Identities=13% Similarity=0.080 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH
Q 038499 122 MVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR 199 (609)
Q Consensus 122 ~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (609)
+++.+.+++.+..| .+++ +|++| +|++.++..++.++ +++|| .|+++.+.|+.+...++
T Consensus 71 lr~~ia~~~~~~~~~~~~~~-~i~it-~G~~~al~~~~~~~---------------~~~gd--~vlv~~p~y~~~~~~~~ 131 (384)
T PRK06348 71 LIEEIIKYYSKNYDLSFKRN-EIMAT-VGACHGMYLALQSI---------------LDPGD--EVIIHEPYFTPYKDQIE 131 (384)
T ss_pred HHHHHHHHHHHHhCCCCChh-hEEEc-CChHHHHHHHHHHh---------------cCCCC--EEEEeCCCCcchHHHHH
Confidence 33444444433333 4565 89998 89999999998876 37888 69999999999998999
Q ss_pred HcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC
Q 038499 200 QSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 200 ~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~ 274 (609)
..|++++.++..+ ++.+|+++|+++++ ++++++++++++||||.+.+ +++|.++|++||+++++|+++..
T Consensus 132 ~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~ 206 (384)
T PRK06348 132 MVGGKPIILETYEEDGFQINVKKLEALIT-----SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDG 206 (384)
T ss_pred HcCCEEEEecCCcCcCCcCCHHHHHHhhC-----cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccccc
Confidence 9999999998743 45699999999887 57899999999999999987 56788889999999999999764
Q ss_pred Ccc---cccCCCCC-CCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 275 PYV---EIDVRSGQ-TDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 275 ~~~---~id~~~~~-~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
... ...+.... ..+..+++.|++|.+|.| ..+|++++++++ ++.+... .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~--~~~~~~~------------------------~ 260 (384)
T PRK06348 207 FSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYI--IETAKII------------------------N 260 (384)
T ss_pred ceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHH--HHHHHHH------------------------H
Confidence 321 11222221 023457778999999844 459999998877 2222111 0
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
.....+.+.+.+.+. ..++.......+.+++..++.++++.+.|+.++++++..+ ..+++.|.-.+ ..
T Consensus 261 ~~~~~~~~~~~q~~~--~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~~~~~~~~-~~----- 328 (384)
T PRK06348 261 EGICFSAPTISQRAA--IYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPP----KGSIYAFINIK-KT----- 328 (384)
T ss_pred HhccCCCCHHHHHHH--HHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccC----CeeEEEEEecc-cC-----
Confidence 001112233333221 1222111112345566667777888889988877776644 34555554433 10
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
.++..++++.|.+++||.+.+|..|... .++++||+++ .+++
T Consensus 329 ---------~~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------~~~~iRi~~~--~~~~ 370 (384)
T PRK06348 329 ---------GLSSVEFCEKLLKEAHVLVIPGKAFGES---------------------------GEGYIRLACT--VGIE 370 (384)
T ss_pred ---------CCCHHHHHHHHHHhCCEEEcCchhhccC---------------------------CCCeEEEEec--CCHH
Confidence 1356788888766689999988766411 1489999996 4788
Q ss_pred HHHHHHHHHHHH
Q 038499 510 EFEFTLEALEFI 521 (609)
Q Consensus 510 eid~ll~al~~v 521 (609)
+++..++.|+.+
T Consensus 371 ~l~~al~~l~~~ 382 (384)
T PRK06348 371 VLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhh
Confidence 888888877653
No 121
>PRK07683 aminotransferase A; Validated
Probab=99.91 E-value=1.3e-21 Score=209.75 Aligned_cols=338 Identities=17% Similarity=0.092 Sum_probs=221.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CC--CCCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GG--GQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~--~~~~~vift~sGt 149 (609)
+.+.++.+... +.+..+.+++.+.+...+ . .|....+ ..++|+.+++++ |. +++.+|++| +|+
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~----~-~Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~~~I~~t-~G~ 98 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITENY----T-SYTHNAG----LLELRKAACNFVKDKYDLHYSPESEIIVT-IGA 98 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCh
Confidence 34555544322 345677788877665321 1 1111122 334555555554 43 343278888 788
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELY 228 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~ 228 (609)
+.++..++..+ +++|| .|+++.+.|+.+...++..|++++.++.+. +..+|.+++++.+.
T Consensus 99 ~~al~~~~~~l---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-- 159 (387)
T PRK07683 99 SEAIDIAFRTI---------------LEPGT--EVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-- 159 (387)
T ss_pred HHHHHHHHHHh---------------CCCCC--EEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC--
Confidence 88999888776 37888 699999999988888888999999999875 45678899999887
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCC-CCCCccEEEEcCCCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSG-QTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~-~~~~~D~v~~S~hK~lg 301 (609)
++++++++++++||||.+.+ +++|+++|+++|+++|+|++++.... ...+... ...+..+++.|++|.+|
T Consensus 160 ---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~ 236 (387)
T PRK07683 160 ---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHS 236 (387)
T ss_pred ---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeecccccc
Confidence 57899999999999999977 67789999999999999999764311 1122221 01133578889999998
Q ss_pred CCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 302 GPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 302 gp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
.|+ .+|++++++++ ++.+... .... .+++.+.+ .++..++-......+.
T Consensus 237 ~pGlRiG~i~~~~~l--~~~~~~~-------------------------~~~~~~~~~~~~q--~~~~~~l~~~~~~~~~ 287 (387)
T PRK07683 237 MTGWRIGFLFAPSYL--AKHILKV-------------------------HQYNVTCASSISQ--YAALEALTAGKDDAKM 287 (387)
T ss_pred CccceeEEEEcCHHH--HHHHHHH-------------------------HHhccCCCChHHH--HHHHHHHhCChHHHHH
Confidence 553 59999999887 2332110 0011 12222322 2222232111122445
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
++++.++.++.+.+.|.+. ++.+..+ ..+++.+...+ .. .++..+++..|.+.+||.+++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~-~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~ll~~~gI~v~p 347 (387)
T PRK07683 288 MRHQYKKRRDYVYNRLISM-GLDVEKP----TGAFYLFPSIG-HF--------------TMSSFDFALDLVEEAGLAVVP 347 (387)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCcccCC----CeeEEEEEecc-cC--------------CCCHHHHHHHHHHhCCEEEcC
Confidence 5666777788888888776 6665543 34666665544 11 134566776655668999998
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|..|... .++++||+++. +++++...++.|.++++.
T Consensus 348 g~~f~~~---------------------------~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 348 GSAFSEY---------------------------GEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred chhhCCC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 8765411 25899999984 688899999998887654
No 122
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=5.7e-22 Score=212.28 Aligned_cols=322 Identities=16% Similarity=0.093 Sum_probs=218.2
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.+.+++.+.+... +.... .+....+...+++++++++++++|.+ . .++++ +|+++++ .++..+
T Consensus 48 ~~~~~~~a~~~~~~~~-~~~~~-~~~~~~g~~~l~~~l~~~l~~~~g~~-~-~i~~~-sG~~a~~-~a~~~~-------- 113 (385)
T TIGR01825 48 DHPRLKEAAAQAIQQY-GVGAG-AVRTIAGTLRLHEELEEKLAKFKKTE-A-ALVFQ-SGFNTNQ-GVLSAL-------- 113 (385)
T ss_pred CCHHHHHHHHHHHHHc-CCCCC-ccCcccCCcHHHHHHHHHHHHHhCCC-c-EEEEC-cHHHHHH-HHHHHh--------
Confidence 5677778887776532 11111 11122234678899999999999964 2 57776 8887655 444443
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGI 248 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~ 248 (609)
+++|| +|++....|+++...+...|++++.++ .+|++++++.+.+.. .++++++++++++|+||.
T Consensus 114 -------~~~gd--~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~-~~~~~~v~~~~v~~~tG~ 178 (385)
T TIGR01825 114 -------LRKGD--IVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENP-SYGKKLIVTDGVFSMDGD 178 (385)
T ss_pred -------CCCCC--EEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhc-cCCCeEEEEecCCcCCCC
Confidence 47888 788999999999888888888887664 478999998887421 136889999999999999
Q ss_pred ccCHHHHHHHHHHhCCeEEEeccccCCccc---------ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccC
Q 038499 249 YSDTRSIARLLHQYGGFACFDFAASGPYVE---------IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLG 319 (609)
Q Consensus 249 ~~dl~~I~~la~~~g~~vivD~A~~~~~~~---------id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~ 319 (609)
+.|+++|.++|++||+++|+|++++.+... +++. .+.|+++.|+||++|+++ |+++.++++ ++
T Consensus 179 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~g--G~~~~~~~~--~~ 250 (385)
T TIGR01825 179 VAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE----DKVDIQVGTLSKAIGVVG--GYAAGHKEL--IE 250 (385)
T ss_pred ccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC----cCCcEEEEeccHHhhcCC--CEEecCHHH--HH
Confidence 999999999999999999999998765332 1221 267899999999998544 888888776 33
Q ss_pred CCCCCccCCCceEeeccccccccccccccccccc---CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 320 SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES---GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~---~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
.+.... ..+. .+.+.....+.+++.... . ...+.++..++++++.+.|+
T Consensus 251 ~~~~~~------------------------~~~~~~~~~~~~~~~a~~~al~~~~--~--~~~~~~~~~~~~~~l~~~L~ 302 (385)
T TIGR01825 251 YLKNRA------------------------RPFLFSTAQPPAVVAALAAAVDELQ--R--SPELMERLWDNTRFFKAGLG 302 (385)
T ss_pred HHHHhC------------------------ccccccCCCCHHHHHHHHHHHHHHh--c--CHHHHHHHHHHHHHHHHHHH
Confidence 321110 0000 112222223344444321 1 12456677778889999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
++ ++++..+ ..+++.+.... . .+..++++.|.++ ||.++++..+..+.
T Consensus 303 ~~-g~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~L~~~-gi~v~~~~~~~~~~--------- 350 (385)
T TIGR01825 303 KL-GYDTGGS----ETPITPVVIGD-E----------------KAAQEFSRRLFDE-GIFAQSIVFPTVPR--------- 350 (385)
T ss_pred Hc-CCCCCCC----CCCEEEEEECC-H----------------HHHHHHHHHHHHC-CcEEcccCCCCCCC---------
Confidence 76 7776644 23455544432 1 1356788888776 99987543322111
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+++|++++++++++|+++++++|+++++.
T Consensus 351 -----------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 351 -----------------GTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred -----------------CCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999998764
No 123
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.7e-23 Score=217.21 Aligned_cols=285 Identities=13% Similarity=0.052 Sum_probs=195.4
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHcC
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
.++++++++.+|.+++ +|+++ +|++++|..++..+ +++| + .|+++.++|+.+...++..|
T Consensus 60 ~~l~~~~a~~~g~~~~-~I~~~-~Gs~e~i~~~~~~~---------------~~~g~~--~vli~~P~y~~y~~~~~~~G 120 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-QVLVS-RGADEGIELLIRAF---------------CEPGKD--AILYCPPTYGMYSVSAETIG 120 (351)
T ss_pred HHHHHHHHHHhCCCHH-HEEEc-CCHHHHHHHHHHHh---------------cCCCCC--EEEEcCCCHHHHHHHHHHcC
Confidence 5788999999999887 89997 89999999998876 3676 6 68999999998888888999
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCccccc
Q 038499 203 AEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVEID 280 (609)
Q Consensus 203 ~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~~id 280 (609)
++++.+++++++.+|++++++++. +++++++++|+||||.+.+.++|.++++.. ++++|+|+++.-......
T Consensus 121 ~~~~~v~~~~~~~~d~~~l~~~~~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s 194 (351)
T PRK01688 121 VEIRTVPTLDNWQLDLPAIADNLD------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQAS 194 (351)
T ss_pred CEEEEeecCCCCCCCHHHHHHhcc------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCC
Confidence 999999998888899999998774 689999999999999999988877776542 689999999643221111
Q ss_pred CCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 281 VRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 281 ~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+... ....--+++.|++|++|-| .++|++++++++ ++.+...... + ..+.
T Consensus 195 ~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~--i~~l~~~~~~------------------------~--~v~~ 246 (351)
T PRK01688 195 LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEV--INLLLKVIAP------------------------Y--PLST 246 (351)
T ss_pred hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHH--HHHHHhccCC------------------------C--CCCH
Confidence 1111 0112246778999999833 347999999887 3333211000 0 1111
Q ss_pred HHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEY--IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 359 i~~~~~aal~~~~~~~--~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
+.+ .++.+++ .+. ...+...++..+.++++.+.|+.++++....+. . +++.+...+
T Consensus 247 ~~~--~~a~~~L-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps---~-~nfi~~~~~--------------- 304 (351)
T PRK01688 247 PVA--DIAAQAL-SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS---E-TNYILARFT--------------- 304 (351)
T ss_pred HHH--HHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC---C-CcEEEEEcC---------------
Confidence 112 1222222 111 113334455566678899999888777533332 2 334333222
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLE 516 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~ 516 (609)
+...+.+.|.+ .||.++.+..+. + .++++|||++ +.+|++++++
T Consensus 305 ----~~~~l~~~L~~-~gi~vr~~~~~~--------~--------------------~~~~iRis~~---~~~e~~~l~~ 348 (351)
T PRK01688 305 ----ASSAVFKSLWD-QGIILRDQNKQP--------G--------------------LSNCLRITIG---TREECQRVID 348 (351)
T ss_pred ----CHHHHHHHHHH-CCeEEEECCCcC--------C--------------------CCCeEEEeCC---CHHHHHHHHH
Confidence 35678888865 599999643221 1 1489999998 8899999999
Q ss_pred HHH
Q 038499 517 ALE 519 (609)
Q Consensus 517 al~ 519 (609)
+|+
T Consensus 349 al~ 351 (351)
T PRK01688 349 ALR 351 (351)
T ss_pred hhC
Confidence 874
No 124
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.91 E-value=2.3e-21 Score=210.90 Aligned_cols=356 Identities=17% Similarity=0.162 Sum_probs=225.1
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCC-CchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEE---eCChHHHHHHHHHHHhc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTC-DSYVGQHTT-NMVHEASNYIKKCLGGGQEDAMIF---CGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~-~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~~vif---t~sGttaal~~l~~~l~ 161 (609)
....+.|.+++...+...|+....+ .++.|.... ++...+++..++++++..+ .+++ ..||+.+++..+...
T Consensus 44 n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~AN~av~~aL-- 120 (475)
T PLN03226 44 NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPANFAVYTAL-- 120 (475)
T ss_pred ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHHHHHHHHHh--
Confidence 3566778888888885555443222 233444333 3444466678888998876 5555 237888766555433
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCC------CccchHHHHHHcCceEE----EEecC-CCCCCCHHHHHHHHhhhcc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPH------EHHSNLLSWRQSLAEVV----EIGLD-DDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~------~h~s~~~~~~~~G~~vv----~v~~~-~~g~ld~e~L~~al~~~~~ 230 (609)
++||| .|++.+. .|.+.....+..+..+. .+..+ ++|.+|+++|++++.+
T Consensus 121 --------------~~pgD--~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~--- 181 (475)
T PLN03226 121 --------------LQPHD--RIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAML--- 181 (475)
T ss_pred --------------CCCCC--EEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh---
Confidence 47999 5887553 23222222222222222 33444 4689999999999975
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.+++++++. . +.+|...|+++|.++|+++|+++++|+||++|....+..+...+++|++++++||||+||.| |+++
T Consensus 182 -~~pklIv~~-~-S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~ 257 (475)
T PLN03226 182 -FRPKLIIAG-A-SAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIF 257 (475)
T ss_pred -cCCeEEEEe-c-CcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEE
Confidence 467766552 3 35889999999999999999999999999999888776543345799999999999988998 8888
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
++++. +....+. .+ +...+.... +... ...+ .|+|+...+...+.++......+.+.+.++..+++++
T Consensus 258 ~~~~~--~~~~~~g-~~-~~~d~~~~i---~~a~----~~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~ 325 (475)
T PLN03226 258 FRKGP--KPPKGQG-EG-AVYDYEDKI---NFAV----FPGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAA 325 (475)
T ss_pred Echhh--cccccCC-Cc-cHHHHHHHh---cccc----CCcc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 88876 3222211 00 000010000 0000 0112 3455555544333333333456788899999999999
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|.+. |++++++.... .++.+.+.+ . .++..++.+.| ++.||.+..+.-.. .
T Consensus 326 L~~~L~~~-G~~l~~~~t~~--hi~lv~~~~-~---------------gi~~~~~~~~L-~~~~I~~nk~~~p~----~- 380 (475)
T PLN03226 326 LANRLMSK-GYKLVTGGTDN--HLVLWDLRP-L---------------GLTGSRVEKVL-DLAHITLNKNAVPG----D- 380 (475)
T ss_pred HHHHHHhC-CCEEEcCCCCC--CEEEEEccC-C---------------CCCHHHHHHHH-HHCCCEECCCCCCC----C-
Confidence 99999884 99998753222 333333322 1 15677888888 45799988654211 0
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEe----cCCCCCHHHHHHHHHHHHHHHHh
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS----FPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls----~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.. ..++..||+. ...-++++|++++.+.|.+++..
T Consensus 381 ~~-------------------~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 381 SS-------------------ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred cc-------------------cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 00 0135667873 45667999999999999998875
No 125
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.1e-21 Score=211.33 Aligned_cols=341 Identities=16% Similarity=0.068 Sum_probs=214.8
Q ss_pred ceEEecCCCC----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh------CCCCCCcEEEeC
Q 038499 77 RLTYADHTAS----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL------GGGQEDAMIFCG 146 (609)
Q Consensus 77 ~~vyld~~a~----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~------g~~~~~~vift~ 146 (609)
+++.|+.+.. -+.++.+.+++.+.+......+.. .| ..++|+.+++++ +++++ +|+++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~----~G------~~~lr~~ia~~~~~~~~~~~~~~-~i~~t- 101 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDS----KG------LFSARKAIMQYYQQKGIPDVDVD-DIYIG- 101 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCC----CC------cHHHHHHHHHHHhccCCCCCCcc-cEEEe-
Confidence 4566655322 135667777777655322111111 11 346777788877 67776 89998
Q ss_pred ChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHH
Q 038499 147 SGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSK 224 (609)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~a 224 (609)
+|+++++..++..+ +++|| .|+++.++|+.+...++..|++++.++.+. ++.+|+++++++
T Consensus 102 ~G~~~~l~~~~~~~---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 164 (404)
T PRK09265 102 NGVSELIVMAMQAL---------------LNNGD--EVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSK 164 (404)
T ss_pred CChHHHHHHHHHHh---------------CCCCC--EEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHh
Confidence 89999998888776 37888 699999999998888888899999888764 457899999999
Q ss_pred HhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCC
Q 038499 225 LELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTH 297 (609)
Q Consensus 225 l~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~h 297 (609)
+. ++++++++++++||||.+.+ +++|+++|++||+++|+|+++..-. ....+..+.....-+++.|++
T Consensus 165 ~~-----~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 239 (404)
T PRK09265 165 IT-----PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLS 239 (404)
T ss_pred cc-----ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecch
Confidence 87 57999999999999999999 7889999999999999999965311 111111111111234567899
Q ss_pred CCCCCCC-CcEEEEEe--chhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 298 KFLGGPG-SPGILLMT--KALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 298 K~lggp~-g~G~L~~~--~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
|.+|.|+ .+|++++. +.+.. ++.+.. ......+++.+.+.+. .+++ .
T Consensus 240 K~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~q~~~--~~~l-~ 291 (404)
T PRK09265 240 KAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM-------------------------LASMRLCANVPAQHAI--QTAL-G 291 (404)
T ss_pred hhccCcccceEEEEEeCchHHHHHHHHHHHH-------------------------HhccccCCCcHHHHHH--HHHh-c
Confidence 9997664 48999974 22100 111100 0000112222333221 1111 1
Q ss_pred HhcCHHHH---HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 373 EYIGHEVI---KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 373 ~~~g~~~i---~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
+....+.+ .++..+.++++.+.|++++++++..+ ..+++.|...+ ... .+..-+...+.+.|
T Consensus 292 ~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~~l~~~~~-~~~----------~~~~~~~~~~~~~l 356 (404)
T PRK09265 292 GYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKP----KGALYAFPKLD-PKV----------YPIHDDEQFVLDLL 356 (404)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEEEEec-ccc----------cCCCCHHHHHHHHH
Confidence 11111222 13455567788888888878776544 34555554443 110 00001233455655
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+.||.+++|..|..+ .++++|+++. .++++++..++.|+.+++.
T Consensus 357 -~~~gv~v~pg~~F~~~---------------------------~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 357 -LQEKVLLVQGTGFNWP---------------------------EPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred -HhCCEEEECchhhCCC---------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 5579999988765311 2589999995 6889999999999887753
No 126
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=1e-21 Score=211.59 Aligned_cols=342 Identities=14% Similarity=0.029 Sum_probs=220.9
Q ss_pred ceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC------CCCCcEEEe
Q 038499 77 RLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG------GQEDAMIFC 145 (609)
Q Consensus 77 ~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~------~~~~~vift 145 (609)
+.+.+..+-. -++++.+.+++.+.+.....+ .|. ......++|+.+++++|. +++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~----~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~-~ii~t 102 (403)
T TIGR01265 32 PIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN----GYA----PSVGALAAREAVAEYLSSDLPGKLTAD-DVVLT 102 (403)
T ss_pred CeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC----CCC----CCCCCHHHHHHHHHHHHhhcCCCCCHH-HEEEe
Confidence 4555555433 255677888887766432111 010 112255678888888874 344 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRS 223 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~ 223 (609)
+|+++++..++.++. .+|| .|+++.++|..+...++..|++++.++++. ++.+|++++++
T Consensus 103 -~G~t~al~~~~~~l~---------------~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 164 (403)
T TIGR01265 103 -SGCSQAIEICIEALA---------------NPGA--NILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEA 164 (403)
T ss_pred -cChHHHHHHHHHHhC---------------CCCC--EEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHH
Confidence 788889999988773 6888 699999999887777888999999998754 46799999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcC
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLST 296 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~ 296 (609)
++. ++++++++++++||||.+.+ +++|.++|+++|+++|+|++++.-.. ...+..+.....-+++.|+
T Consensus 165 ~~~-----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 239 (403)
T TIGR01265 165 LAD-----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGI 239 (403)
T ss_pred HhC-----cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeec
Confidence 887 57899999999999999987 78899999999999999999763221 1122222111123667799
Q ss_pred CCCCCCCC-CcEEEEEec--hhhc---cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 297 HKFLGGPG-SPGILLMTK--ALYQ---LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 297 hK~lggp~-g~G~L~~~~--~~~~---l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
+|.++.|+ .+|++++.+ .+.. ++.+... .....+.+.+.+. ++...
T Consensus 240 SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~q~---~~~~~ 291 (403)
T TIGR01265 240 SKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNL-------------------------LQRILGPATIVQG---ALPDI 291 (403)
T ss_pred ccccCCCcceEEEEEEeCchhhhHHHHHHHHHHH-------------------------hhhhcCCChHHHH---HHHHH
Confidence 99987674 599999853 2200 1111000 0001122233332 22222
Q ss_pred HHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 371 VKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 371 ~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
+.+ ....+..+++.++.++++.+.|+.++++.+..+ ..+++.+...+... .....+..++++.
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~f~~~~~~~~~-----------~~~~~~~~~~~~~ 356 (403)
T TIGR01265 292 LENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP----EGAMYLMVKLELEL-----------FPEIKDDVDFCEK 356 (403)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CceeEEEEeccccc-----------cCCCCCHHHHHHH
Confidence 211 123455566677778888899988878775544 23444444333010 0001245678777
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|.++.||.+++|..|. .++++||+++. .+++++..++.|.+++++
T Consensus 357 l~~~~gv~v~pg~~f~-----------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 357 LVREESVICLPGSAFG-----------------------------LPNWVRITITV--PESMLEEACSRIKEFCER 401 (403)
T ss_pred HHHhCCEEEeCccccC-----------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 6666899999887653 14899999983 577888888888777643
No 127
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=6.9e-22 Score=212.84 Aligned_cols=342 Identities=11% Similarity=-0.052 Sum_probs=219.4
Q ss_pred ceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC-----CCCCCcEEEeC
Q 038499 77 RLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG-----GGQEDAMIFCG 146 (609)
Q Consensus 77 ~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g-----~~~~~~vift~ 146 (609)
+.+.|..+.. -+.++.+.+++.+.+... +...|. ......++|+.++++++ .+++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~----~~~g~~~lr~aia~~~~~~~~~~~~~-~i~~t- 101 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG----KYNGYA----PTVGALSAREAIASYYHNPDGPIEAD-DVVLC- 101 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhcc----CCCCCC----CCCCCHHHHHHHHHHHhhcCCCCCHH-HEEEC-
Confidence 4455554433 245667788877765431 100010 11123567778888876 4555 78887
Q ss_pred ChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHH
Q 038499 147 SGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSK 224 (609)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~a 224 (609)
+|+++++..++.++ +++|| .|+++.+.|+.+...++..|++++.++++. ++.+|+++|+++
T Consensus 102 ~G~~~al~~~~~~l---------------~~~gd--~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~ 164 (401)
T TIGR01264 102 SGCSHAIEMCIAAL---------------ANAGQ--NILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESL 164 (401)
T ss_pred cChHHHHHHHHHHh---------------CCCCC--EEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHH
Confidence 88888999988877 37888 688888889888888889999999998754 468999999998
Q ss_pred HhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCC
Q 038499 225 LELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTH 297 (609)
Q Consensus 225 l~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~h 297 (609)
++ .+++++++++++||||.+.+ +++|+++|+++|+++++|+++..-. ....+..+.....-+++.|++
T Consensus 165 ~~-----~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 239 (401)
T TIGR01264 165 ID-----EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLA 239 (401)
T ss_pred hc-----cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCc
Confidence 87 46899999999999999986 6778899999999999999965321 111222221111236778999
Q ss_pred CCCCCCC-CcEEEEEech--hh-c-cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 298 KFLGGPG-SPGILLMTKA--LY-Q-LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 298 K~lggp~-g~G~L~~~~~--~~-~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
|.++.|+ .+|++++++. .. . ++.+... .....+.+.+.+.+ +..++ .
T Consensus 240 K~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~q~a--~~~~l-~ 291 (401)
T TIGR01264 240 KRWLVPGWRLGWIIIHDRRGILRDIRDGLVKL-------------------------SQRILGPCTIVQGA--LPSIL-L 291 (401)
T ss_pred ccCCCccceEEEEEecCcchhHHHHHHHHHHH-------------------------hhccCCCCcHHHHH--HHHHH-H
Confidence 9877664 4999998742 10 0 1111000 00011222233322 22222 2
Q ss_pred H--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 373 E--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 373 ~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
+ ....+..+++.++.++++.+.|+.++++.+..+ ..+++.|.-.+ ... .....+...+++.|.
T Consensus 292 ~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~~~~~~-~~~----------~~~~~~~~~~~~~l~ 356 (401)
T TIGR01264 292 RTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP----SGAMYMMVGIE-MEH----------FPEFKNDVEFTERLV 356 (401)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeeEEEEEec-ccc----------cCCCCCHHHHHHHHH
Confidence 2 123455666777778888899988877665433 34555555432 100 000124567777776
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++||.+++|..|. .++++||+++. .+++++..++.|..++++
T Consensus 357 ~~~gI~v~pg~~f~-----------------------------~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 357 AEQSVFCLPGSCFE-----------------------------YPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred HhCCEEEeCchhcC-----------------------------CCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 66799999886543 14899999983 578899999888887653
No 128
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=1.9e-22 Score=212.20 Aligned_cols=294 Identities=20% Similarity=0.162 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHhCCC------CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 123 VHEASNYIKKCLGGG------QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~------~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
..++++.++++++.. ++ +++++ +|+++++..++..+. ++|+ +|+++...|+++..
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~-~~~~~-~~~t~a~~~~~~~~~---------------~~g~--~vl~~~~~~~~~~~ 98 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPE-EIVVT-NGAQEALSLLLRALL---------------NPGD--EVLVPDPTYPGYEA 98 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc-eEEEe-cCcHHHHHHHHHHhC---------------CCCC--EEEEcCCCchhHHH
Confidence 344555555555433 33 78888 677778888888763 5677 79999999999999
Q ss_pred HHHHcCceEEEEecCCCCCCCH--HHHHHHHhhhccCCCceEEEEecccCccccccCHHHH---HHHHHHhCCeEEEecc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDI--EALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSI---ARLLHQYGGFACFDFA 271 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~--e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I---~~la~~~g~~vivD~A 271 (609)
.++..|++++.++.++++..+. +.++..+. ++++++++++++|+||.+.|++++ .++|+++|+++++|++
T Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a 173 (350)
T cd00609 99 AARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-----PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEA 173 (350)
T ss_pred HHHHCCCEEEEEecccccCCccCHHHHHhhcC-----ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecc
Confidence 9999999999999988776665 56665554 689999999999999999986655 5899999999999999
Q ss_pred ccCCccc-ccC---CCCCCCCccEEEEcCCCCCC-CCCCcEEEEEec-hhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 272 ASGPYVE-IDV---RSGQTDGYDAIFLSTHKFLG-GPGSPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 272 ~~~~~~~-id~---~~~~~~~~D~v~~S~hK~lg-gp~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
++.+... ... ......+.|+++.|+||+++ ++.+.|++++++ ++ ++.+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~--~~~~~~~--------------------- 230 (350)
T cd00609 174 YAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL--LERLKKL--------------------- 230 (350)
T ss_pred hhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHH--HHHHHHH---------------------
Confidence 8764321 111 11122367899999999998 445689999998 56 2232111
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEY-IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~-~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
.+....+++......+. ..++.. .+.+.+.++.+++++++.+.|.+++...+.. +..+++.+...+ ..
T Consensus 231 ----~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~g~~~~~~~~-~~ 299 (350)
T cd00609 231 ----LPYTTSGPSTLSQAAAA--AALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVK----PSGGFFLWLDLP-EG 299 (350)
T ss_pred ----HHhcccCCChHHHHHHH--HHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC----CCccEEEEEecC-CC
Confidence 11112334433332222 222222 4577888889999999999999876554321 233455444433 11
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY 504 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~ 504 (609)
.+...+.++|. ++||.++.+..+.. . .+.++|++++.
T Consensus 300 ---------------~~~~~~~~~l~-~~gi~i~~~~~~~~-------~--------------------~~~~iRi~~~~ 336 (350)
T cd00609 300 ---------------DDEEFLERLLL-EAGVVVRPGSAFGE-------G--------------------GEGFVRLSFAT 336 (350)
T ss_pred ---------------ChHHHHHHHHH-hCCEEEeccccccc-------C--------------------CCCeEEEEeeC
Confidence 24556667774 57999997655431 0 25799999987
Q ss_pred CCCHHHHHHHHHHHH
Q 038499 505 YMSNEEFEFTLEALE 519 (609)
Q Consensus 505 ~~t~eeid~ll~al~ 519 (609)
. ++|+++++++|+
T Consensus 337 ~--~~~i~~~~~al~ 349 (350)
T cd00609 337 P--EEELEEALERLA 349 (350)
T ss_pred C--HHHHHHHHHHhh
Confidence 7 999999999986
No 129
>PRK07337 aminotransferase; Validated
Probab=99.90 E-value=9.6e-22 Score=210.81 Aligned_cols=342 Identities=15% Similarity=0.081 Sum_probs=216.6
Q ss_pred ceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal 153 (609)
.+++++.+.... .++.+.+++.+.+... .. .|....+..++++.+.+++.+.+|. +++ +|++| +|+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~t-~G~~~al 103 (388)
T PRK07337 31 DIIHMGIGEPDFTAPEPVVEAAARALRRG----VT-QYTSALGLAPLREAIAAWYARRFGLDVAPE-RIVVT-AGASAAL 103 (388)
T ss_pred CEEEeCCcCCCCCCCHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCCChH-hEEEe-cCcHHHH
Confidence 578888876553 4667788887765421 11 1111112233333333344333453 555 89998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|+++.++|+.+...++..|++++.++++. ++.+|+++|++++.
T Consensus 104 ~~~~~~l---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----- 161 (388)
T PRK07337 104 LLACLAL---------------VERGD--EVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG----- 161 (388)
T ss_pred HHHHHHh---------------cCCCC--EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-----
Confidence 9888876 37888 699999999999888888999999999874 45899999999987
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC-cc--cccCCCCCCCCcc-EEEEcCCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV--EIDVRSGQTDGYD-AIFLSTHKFLGGPG 304 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~~--~id~~~~~~~~~D-~v~~S~hK~lggp~ 304 (609)
++++++++++++||||.+.+ +++|+++|++||+++++|+++..- +. +...... +.+ +++.|++|.+|.|+
T Consensus 162 ~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~G 238 (388)
T PRK07337 162 ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMTG 238 (388)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCch
Confidence 68899999999999999987 577889999999999999986531 11 1111111 223 45669999997553
Q ss_pred -CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh-cCHHHHHH
Q 038499 305 -SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY-IGHEVIKK 382 (609)
Q Consensus 305 -g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~-~g~~~i~~ 382 (609)
.+|++++++++ ++.+.... .....+++.+.+.+ ++.++..+. ...+..++
T Consensus 239 ~RiG~~~~~~~l--~~~l~~~~------------------------~~~~~~~s~~~q~~--~~~~l~~~~~~~~~~~~~ 290 (388)
T PRK07337 239 WRLGWLVVPEAL--VGTFEKLA------------------------QNLFICASALAQHA--ALACFEPDTLAIYERRRA 290 (388)
T ss_pred hheeeeecCHHH--HHHHHHHH------------------------HHhccCCChHHHHH--HHHHhccCchHHHHHHHH
Confidence 48999999877 33321110 00111222333322 112221010 11344556
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.++.++++.+.|+++ ++.+... +..+++.|.-.+ ... .....+..+++..|.++.||.+.+|..
T Consensus 291 ~~~~~r~~~~~~L~~~-~~~~~~~---p~~g~f~~~~~~-~~~----------~~~~~~~~~~~~~ll~~~gv~v~pg~~ 355 (388)
T PRK07337 291 EFKRRRDFIVPALESL-GFKVPVM---PDGAFYVYADCR-GVA----------HPAAGDSAALTQAMLHDAGVVLVPGRD 355 (388)
T ss_pred HHHHHHHHHHHHHHhc-CCccccC---CCeeEEEEEecc-ccc----------CCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 6677778888888876 5543211 234555554433 100 001135667777766668999998876
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
|..+. .++++||+++. ++++++..++.|.++
T Consensus 356 f~~~~--------------------------~~~~~Ri~~~~--~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 356 FGPHA--------------------------PRDYIRLSYAT--SMSRLEEAVARLGKL 386 (388)
T ss_pred hCCCC--------------------------CCCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 64210 14899999984 577777777777654
No 130
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.4e-22 Score=214.51 Aligned_cols=283 Identities=17% Similarity=0.082 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
..++|+.+++++|++++ +|++| +|++++|..++.++. ++| | .|++..+.|+.+...++..
T Consensus 62 ~~~Lr~aia~~~~~~~~-~I~it-~Gs~~~i~~~~~~~~---------------~~g~d--~vlv~~P~y~~y~~~~~~~ 122 (354)
T PRK04635 62 PPELINAYSAYAGVAPE-QILTS-RGADEAIELLIRAFC---------------EPGQD--SIACFGPTYGMYAISAETF 122 (354)
T ss_pred HHHHHHHHHHHhCcCHH-HEEEe-CCHHHHHHHHHHHhc---------------CCCCC--eEEEcCCChHHHHHHHHHc
Confidence 35688999999999887 89998 899999999998873 677 6 6888999998887788889
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh-CCeEEEeccccCCccccc
Q 038499 202 LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPYVEID 280 (609)
Q Consensus 202 G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~-g~~vivD~A~~~~~~~id 280 (609)
|++++.++++.++.+|++.++ ++ ++++++++++|+||||.+.|.+++.++++.. ++++|+|+++........
T Consensus 123 g~~v~~v~~~~~~~~~~~~l~-~~------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s 195 (354)
T PRK04635 123 NVGVKALPLTADYQLPLDYIE-QL------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYS 195 (354)
T ss_pred CCEEEEEecCCCCCCCHHHHH-hc------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcc
Confidence 999999999877889999886 33 3789999999999999999999999999874 799999999653221111
Q ss_pred CCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 281 VRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 281 ~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+... ....--+++.|++|++|.| .++|++++++++ ++.+...... .+.+.
T Consensus 196 ~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~--~~~l~~~~~~--------------------------~~~~~ 247 (354)
T PRK04635 196 VADLLASYPNLVVLRTLSKAFALAGARCGFTLANEEL--IEILMRVIAP--------------------------YPVPL 247 (354)
T ss_pred hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHH--HHHHHhhcCC--------------------------CCCCH
Confidence 1110 0011135677999999733 348999999888 3333211000 11222
Q ss_pred HHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVI---KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i---~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
..+ .++++++ +..+.+.+ .++.++.++++.+.|+++++++++.+. .+++ +.-.+
T Consensus 248 ~~~--~~a~~~l--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~----g~f~-~~~~~-------------- 304 (354)
T PRK04635 248 PVS--EIATQAL--SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN----GNYV-LAKFD-------------- 304 (354)
T ss_pred HHH--HHHHHHH--hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC----CcEE-EEECC--------------
Confidence 222 2233333 22333333 344555668888999888777776542 2333 22222
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
+..++.+.|.+ .||.++.+ ..+ + .++++|||++ +.+|+++++
T Consensus 305 -----~~~~~~~~l~~-~gv~v~~~---~~~------~--------------------~~~~lRis~~---~~e~~~~l~ 346 (354)
T PRK04635 305 -----DVDAVFKALWD-AGIVARAY---KDP------R--------------------LANCIRFSFS---NRAETDKLI 346 (354)
T ss_pred -----CHHHHHHHHHH-CCEEEEEC---CCC------C--------------------CCCeEEEEeC---CHHHHHHHH
Confidence 35677777754 69999843 211 0 1589999986 899999999
Q ss_pred HHHHH
Q 038499 516 EALEF 520 (609)
Q Consensus 516 ~al~~ 520 (609)
++|++
T Consensus 347 ~al~~ 351 (354)
T PRK04635 347 GLIRN 351 (354)
T ss_pred HHHHH
Confidence 99975
No 131
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=209.18 Aligned_cols=351 Identities=17% Similarity=0.157 Sum_probs=227.9
Q ss_pred CCChHHHHHHHHHhhcCCccC--CCCCCchhhHHH-HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcc-
Q 038499 87 GRSLRYIENYIINNVLPFYGN--THTCDSYVGQHT-TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGI- 162 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~-~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~- 162 (609)
....+.|.+++...+...|+. |+.. ++.|... .++...+.+..+++||++.. +|=.- ||+.+++..+...+.-
T Consensus 59 N~~s~~v~~a~~s~l~nkyaeg~pg~r-yy~g~~~~d~ie~l~~~ra~~lf~a~~a-nvqp~-Sg~~An~~v~~all~~~ 135 (493)
T PRK13580 59 NYSSLAVQLAMGNLLTDKYAEGTPGHR-FYAGCQNVDTVEWEAAEHAKELFGAEHA-YVQPH-SGADANLVAFWAILAHK 135 (493)
T ss_pred ccCCHHHHHHhcccccccCcCCCCCcc-ccCCCchHHHHHHHHHHHHHHHhCCCcc-cccCC-CcHHHHHHHHHHHhccc
Confidence 355677888887777766643 3332 3444443 45666688899999999876 55444 8999876666554420
Q ss_pred -cch-----h----------hHHHHHHhhhcCCCceEEEECCCCccchHH-----HHHHcCceEEEEecCC-CCCCCHHH
Q 038499 163 -AVP-----S----------ILREKLIKCLRDEERWVVFVGPHEHHSNLL-----SWRQSLAEVVEIGLDD-DGLLDIEA 220 (609)
Q Consensus 163 -~~~-----~----------~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-----~~~~~G~~vv~v~~~~-~g~ld~e~ 220 (609)
..| + .|. .+-+ .-.|| .|+.-+..|..... .+.....+++..++++ +|.+|+++
T Consensus 136 ~~~p~~~~~g~~~~~~~~~~~~~-~~~~-~~~gd--~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~ 211 (493)
T PRK13580 136 VESPALEKLGAKTVNDLTEEDWE-ALRA-ELGNQ--RLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDE 211 (493)
T ss_pred ccCcchhccccccccccchhhhh-hhhc-cCCCC--EEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHH
Confidence 000 0 000 0000 00156 46665555533221 1222235667777775 68999999
Q ss_pred HHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC---CCCCCccEEEEcCC
Q 038499 221 LRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS---GQTDGYDAIFLSTH 297 (609)
Q Consensus 221 L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~---~~~~~~D~v~~S~h 297 (609)
+++.++ ++++++++++.+|..+ ..|+++|.++|++||+++++|+||++|.+..+... ....++|++++|+|
T Consensus 212 l~~~~~-----~~~plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~h 285 (493)
T PRK13580 212 IAALAR-----EFKPLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTH 285 (493)
T ss_pred HHHHHh-----hcCCEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCCh
Confidence 999998 5677888889999955 77999999999999999999999999988766532 11247899999999
Q ss_pred CCCCCCCCcEEEEEechhhccCCC---CCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh
Q 038499 298 KFLGGPGSPGILLMTKALYQLGSF---PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY 374 (609)
Q Consensus 298 K~lggp~g~G~L~~~~~~~~l~~~---~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~ 374 (609)
|+|+||.| |++++++++ ++.+ .|.. .|++....++++++++.....
T Consensus 286 KaL~GP~G-G~I~~~~~l--~~~L~~a~P~i----------------------------~gg~l~p~iAA~avAl~e~~~ 334 (493)
T PRK13580 286 KTLRGPRG-GLVLAKKEY--ADAVDKGCPLV----------------------------LGGPLPHVMAAKAVALAEART 334 (493)
T ss_pred hhccCCCe-EEEEecHHH--HHHHhhCCCcc----------------------------cCCCccHHHHHHHHHHHHHhC
Confidence 99988997 999999887 2222 2222 233322233333333332222
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcC
Q 038499 375 IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFG 454 (609)
Q Consensus 375 ~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~G 454 (609)
......+++..++++++.+.|.+. |+.++... ...+++.+.+.+ .. .....+.+.|.+ .|
T Consensus 335 ~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~gg--TdshIV~V~lg~-~~---------------~~g~~a~~~L~e-~G 394 (493)
T PRK13580 335 PEFQKYAQQVVDNARALAEGFLKR-GARLVTGG--TDNHLVLIDVTS-FG---------------LTGRQAESALLD-AG 394 (493)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCC--CCCCEEEEEeCC-HH---------------HHHHHHHHHHHH-CC
Confidence 344667889999999999999887 88876421 234777777654 11 123456667754 69
Q ss_pred cEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 038499 455 IQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY----YMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 455 I~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~----~~t~eeid~ll~al~~v~~~ 524 (609)
|.+..-.....|.+. ..+..|||+++. .++++|+++++++|..+++.
T Consensus 395 I~vn~i~~Ptvp~g~-----------------------~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 395 IVTNRNSIPSDPNGA-----------------------WYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred eEEccccCCCCCCCC-----------------------CCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 998743322222111 014779999987 44699999999999998874
No 132
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.90 E-value=1.5e-22 Score=212.64 Aligned_cols=315 Identities=15% Similarity=0.065 Sum_probs=198.7
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
+++.+.+++.+..... . . + ......+++++.+++++| ++ +++++++|+ +++..++.++
T Consensus 10 ~~~~v~~a~~~~~~~~---~--~-~----~~~~~~~~l~~~~a~~~g--~~-~~~~~~~gt-~a~~~~~~~l-------- 67 (338)
T cd06502 10 PTPEMLEAMAAANVGD---D--V-Y----GEDPTTAKLEARAAELFG--KE-AALFVPSGT-AANQLALAAH-------- 67 (338)
T ss_pred CCHHHHHHHHhcccCC---c--c-c----CCCHHHHHHHHHHHHHhC--CC-eEEEecCch-HHHHHHHHHh--------
Confidence 4556778877654311 1 1 1 113457889999999999 33 677876776 5677777665
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHH---HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc--cCCCceEEEEeccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLL---SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK--DAKRPILGSFSACS 243 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~---~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~--~~~~~~lv~~s~~s 243 (609)
+++|| .|++++..|.++.. ..+..|++++.++.+. +.+|+++|++++++.. ..++++++++++++
T Consensus 68 -------~~~gd--~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~ 137 (338)
T cd06502 68 -------TQPGG--SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTT 137 (338)
T ss_pred -------cCCCC--eEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeec
Confidence 37888 68899999987653 2345799999999765 6799999999997311 01368999999999
Q ss_pred Ccccc--ccCHHHHHHHHHHhCCeEEEeccccCCc---ccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 244 NVTGI--YSDTRSIARLLHQYGGFACFDFAASGPY---VEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 244 n~TG~--~~dl~~I~~la~~~g~~vivD~A~~~~~---~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
|++|. ..++++|+++|++||+++++|+|+..+. ....+... ..++|+++.|+||++|+|+| ++++.++++ +
T Consensus 138 n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~-~~~~d~~~~s~sK~~~~~~g-~~~~~~~~~--~ 213 (338)
T cd06502 138 EGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY-KSGVDSVSFCLSKGGGAPVG-AVVVGNRDF--I 213 (338)
T ss_pred CCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH-HhcCCEEEEeccccCCCccc-eEEECCHHH--H
Confidence 97443 3456789999999999999999863221 00111111 12679999999999998764 566677776 3
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+.+.+... ...++....+.. .+++.. + +..+.....++..++++++.+.|++
T Consensus 214 ~~~~~~~~-------------------------~~~~~~~~~~~~~~a~~~~-L-~~~~~~~~~~~~~~~~~~l~~~L~~ 266 (338)
T cd06502 214 ARARRRRK-------------------------QAGGGMRQSGFLAAAGLAA-L-ENDLWLRRLRHDHEMARRLAEALEE 266 (338)
T ss_pred HHHHHHHH-------------------------HhCCChhhHHHHHHHHHHH-h-cCchHHHHHHHHHHHHHHHHHHHHh
Confidence 33322110 001222222222 222222 2 2234555667888888999999988
Q ss_pred CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh--hcCcEeccCcccCChhhhhhcCCC
Q 038499 398 NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND--LFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 398 ~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~--~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
+ ++.+.. ...+++.+.... .. .....+.+.+.+ ..||.++..
T Consensus 267 ~-~~~~~~----~~~~~~~v~~~~-~~---------------~~~~~l~~~l~~~~~~gi~~~~~--------------- 310 (338)
T cd06502 267 L-GGLESE----VQTNIVLLDPVE-AN---------------AVFVELSKEAIERRGEGVLFYAW--------------- 310 (338)
T ss_pred c-CCCccc----ccCCeEEEecCC-cc---------------HHHHHHHHHHHHhhhCCEEEEec---------------
Confidence 7 444332 234555554432 10 011122222210 347776521
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
..+++|+++++++|++|+++++++++.
T Consensus 311 ------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 ------------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ------------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 126899999999999999999999875
No 133
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.1e-21 Score=208.78 Aligned_cols=337 Identities=12% Similarity=0.023 Sum_probs=219.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh-----CCCCCCcEEEeCChHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL-----GGGQEDAMIFCGSGTT 150 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~-----g~~~~~~vift~sGtt 150 (609)
++++++.+... +.++.+.+++.+........+. .....++|+.+++++ +.+++ +|++| +|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~~~~~~~~~~~~-~i~~t-~G~~ 98 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSH----------SQGIPELREAFAKYYKKWGIDVEPD-EILIT-NGGS 98 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCC----------CCCCHHHHHHHHHHHHHhCCCCCcc-eEEEc-CChH
Confidence 47888887764 4677788887654322211111 112455677777776 45565 89998 7888
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CC-C-CCHHHHHHHHhh
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DG-L-LDIEALRSKLEL 227 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g-~-ld~e~L~~al~~ 227 (609)
+++..++..+ +++|| .|+++.+.|+.+...++..|++++.++.+. +| . .++++|+++++
T Consensus 99 ~al~~~~~~l---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~- 160 (397)
T PRK07568 99 EAILFAMMAI---------------CDPGD--EILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT- 160 (397)
T ss_pred HHHHHHHHHh---------------cCCCC--EEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-
Confidence 8999887765 37888 688888777766666778899999999863 33 2 36799999887
Q ss_pred hccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC-CCccEEEEcCCCC
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT-DGYDAIFLSTHKF 299 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~-~~~D~v~~S~hK~ 299 (609)
++++++++++++||||.+.+ +++|+++|+++|+++++|+++..-. ....+..... ....+++.|++|.
T Consensus 161 ----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~ 236 (397)
T PRK07568 161 ----PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKR 236 (397)
T ss_pred ----ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhh
Confidence 57899999999999999986 6789999999999999999965321 1111111110 1224777899999
Q ss_pred CCCC-CCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcC
Q 038499 300 LGGP-GSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIG 376 (609)
Q Consensus 300 lggp-~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g 376 (609)
+|.| ..+|+++++ +++ ++.+... .. ...+++.+.+.+.+ . ++.. ...
T Consensus 237 ~~~~G~R~G~~~~~~~~~--~~~~~~~------------------------~~-~~~~~s~~~q~~~~--~-~l~~~~~~ 286 (397)
T PRK07568 237 YSACGARIGCLISKNKEL--IAAAMKL------------------------CQ-ARLSPPTLEQIGAA--A-LLDTPESY 286 (397)
T ss_pred ccCCCcceEEEecCCHHH--HHHHHHH------------------------hh-ccCCCCcHHHHHHH--H-HhhCCHHH
Confidence 9854 359999985 455 2221000 00 01123333332211 1 1211 123
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhh----
Q 038499 377 HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDL---- 452 (609)
Q Consensus 377 ~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~---- 452 (609)
.+.+++..++.++.+.+.|++++++.+..+ ..+++.|.-.+ . .+...+++.|.++
T Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~-~----------------~~~~~~~~~l~~~~~~~ 345 (397)
T PRK07568 287 FDEVREEYKKRRDILYEELNKIPGVVCEKP----KGAFYIIAKLP-V----------------DDAEDFAKWLLTDFNYN 345 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceecCC----CcceEEEEecC-C----------------CCHHHHHHHHHhhcccc
Confidence 455666777788889999988877766544 33454444333 1 1356777777653
Q ss_pred -cCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 453 -FGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 453 -~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.||.+.+|..|....+ ..++++||+++ .++++++..++.|..++++
T Consensus 346 ~~gv~v~pg~~f~~~~~------------------------~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 346 GETVMVAPASGFYATPG------------------------LGKNEIRIAYV--LNEEDLKRAMEILKEALEK 392 (397)
T ss_pred cceEEEeCchHhcCCCC------------------------CCCCeEEEEEe--CCHHHHHHHHHHHHHHHHH
Confidence 5999998875531100 02479999997 4679999999999887764
No 134
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=208.48 Aligned_cols=287 Identities=19% Similarity=0.080 Sum_probs=198.0
Q ss_pred HHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce
Q 038499 125 EASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE 204 (609)
Q Consensus 125 e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~ 204 (609)
++|+.+++++|++++ +|++| +|+++++..++..+ +++|| .|++..+.|+.+...++..|++
T Consensus 75 ~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~~~~~~---------------~~~gd--~vli~~P~y~~~~~~~~~~g~~ 135 (371)
T PRK05166 75 ALREAIAARTGVPAD-RIILG-NGSEDLIAVICRAV---------------LRPGD--RVVTLYPSFPLHEDYPTMMGAR 135 (371)
T ss_pred HHHHHHHHHhCcCHH-HEEEc-CCHHHHHHHHHHHh---------------cCCCC--EEEEcCCChHHHHHHHHHcCCe
Confidence 688899999999876 89998 89999999888776 37888 6899999998887788889999
Q ss_pred EEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCccc---c
Q 038499 205 VVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVE---I 279 (609)
Q Consensus 205 vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~---i 279 (609)
++.++.+.++.+|+++++++++ ++++++++++++||||.+.|.+++.++++. .++++++|+++..-... .
T Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~ 210 (371)
T PRK05166 136 VERVTVTPDLGFDLDALCAAVA-----RAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYP 210 (371)
T ss_pred EEEeecCCCCCCCHHHHHHhhh-----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcc
Confidence 9999998888899999999987 578999999999999999998877777664 47899999996532110 1
Q ss_pred cCCC-CC-CCCccEEEEcCCCCCCCC-CCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 280 DVRS-GQ-TDGYDAIFLSTHKFLGGP-GSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 280 d~~~-~~-~~~~D~v~~S~hK~lggp-~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
.+-. .. .....+++.|++|.+|-| ..+|++++. +++ ++.+... +...+
T Consensus 211 ~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l--~~~~~~~--------------------------~~~~~ 262 (371)
T PRK05166 211 SALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL--VGLLDRV--------------------------RTPFN 262 (371)
T ss_pred cHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHH--HHHHHHh--------------------------ccCCC
Confidence 1000 00 011247788999999844 458998874 455 2222100 00012
Q ss_pred ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 356 TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 356 tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
.+.+.+ .+++..+. +....+...+..++.++++.+.|+.. ++.+..+ ...++ +.-.+
T Consensus 263 ~~~~~q--~~~~~~l~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~p~----~g~fl-~~~~~-------------- 319 (371)
T PRK05166 263 VNGAAQ--AAALAALD-DEEHLAKGVALALAERERLKKELAEM-GYRIAPS----RANFL-FFDAR-------------- 319 (371)
T ss_pred CCHHHH--HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeCCC----cCCEE-EEeCC--------------
Confidence 222222 12222221 22234555566677778888888877 6665432 23333 33222
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
.+..++.+.|.+ .||.+++|.... .++++||+++ +.++.++++
T Consensus 320 ----~~~~~l~~~l~~-~gi~v~p~~~~~-----------------------------~~~~iRi~~~---~~~~~~~l~ 362 (371)
T PRK05166 320 ----RPASAVAEALLR-QGVIVKPWKQPG-----------------------------FETFIRVSIG---SPEENDHFV 362 (371)
T ss_pred ----CCHHHHHHHHHH-CCeEEecCCCCC-----------------------------CCCeEEEEcC---CHHHHHHHH
Confidence 145678888876 599999764211 1489999998 788899999
Q ss_pred HHHHHHHH
Q 038499 516 EALEFIAI 523 (609)
Q Consensus 516 ~al~~v~~ 523 (609)
++|+.+..
T Consensus 363 ~~l~~i~~ 370 (371)
T PRK05166 363 AALDKVLE 370 (371)
T ss_pred HHHHHHhh
Confidence 99988753
No 135
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=7e-22 Score=212.92 Aligned_cols=334 Identities=17% Similarity=0.151 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 117 QHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 117 ~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
+......+++++.++++.|+.. .++++||+. |++.++..+ +++|| +|++++.+|++...
T Consensus 60 R~~~p~~~~le~~lA~l~g~~~---av~~sSGt~-Al~~al~~l---------------l~~Gd--~Vi~~~~~y~~t~~ 118 (433)
T PRK08134 60 RISNPTVAVLEERVAALEGGVG---AIATASGQA-ALHLAIATL---------------MGAGS--HIVASSALYGGSHN 118 (433)
T ss_pred cCcChHHHHHHHHHHHHhCCCc---EEEeCCHHH-HHHHHHHHH---------------hCCCC--EEEEeCCccHHHHH
Confidence 3334568889999999999863 467756655 687776654 47898 79999999987655
Q ss_pred HH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccc
Q 038499 197 SW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 197 ~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~ 272 (609)
.+ ...|+++++++.+ |+++|+++|+ ++|++|++++++||+|.+.|+++|+++||+||+++++|+++
T Consensus 119 ~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~-----~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~ 188 (433)
T PRK08134 119 LLHYTLRRFGIETTFVKPG-----DIDGWRAAIR-----PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTF 188 (433)
T ss_pred HHHHHHhhCCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 43 4479999999875 8999999998 68999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEe-chhh--c---cCCCCCCccCCCceEeecccccccc--c
Q 038499 273 SGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMT-KALY--Q---LGSFPPSTCGGGTVNYVNGFNEKDT--L 343 (609)
Q Consensus 273 ~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~-~~~~--~---l~~~~p~~~ggg~v~~~~~~~~~~~--~ 343 (609)
+.|+...++ .+ ++|++++|.|||+||++. +|.+++. .... . +..+.+...+++.+.. ..+.. .
T Consensus 189 a~~~~~~pl-~~---GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~ 260 (433)
T PRK08134 189 TTPYLLRPF-EH---GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVF----AEESTVAA 260 (433)
T ss_pred cccccCCch-hc---CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccch----hhccchhH
Confidence 988876554 33 899999999999997764 5555553 2210 0 1112222222211100 00000 0
Q ss_pred cccccc--ccccCC-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-----------
Q 038499 344 YLEDIE--ERESGG-TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS----------- 408 (609)
Q Consensus 344 ~~~~~~--~r~~~g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~----------- 408 (609)
++.... .....| ..+. ..+.+. +......+...++..+.+.++.+.|+++|.+. |.-|.-
T Consensus 261 ~~~~~~~~~~~~~G~~ls~---~~A~l~--~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~ 335 (433)
T PRK08134 261 FLLRARREGLRDFGACLSP---MNAWQL--LQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKR 335 (433)
T ss_pred HHHHHHHHHHHhcCCCCCH---HHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHH
Confidence 000000 000111 1111 112211 11223456667777888899999999998874 433321
Q ss_pred ---CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHH
Q 038499 409 ---TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 409 ---~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~ 482 (609)
....++++|.+.. +. -....+.+.| +.+.+.+.-|...+ .|.......+..+...
T Consensus 336 ~~~~g~gg~~s~~l~~-~~---------------~~~~~f~~~l-~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~-- 396 (433)
T PRK08134 336 LLPRGAGSVFSFDLKG-GR---------------AAGRKFIESL-KLFSHLANVGDARSLVIHPASTTHFRMDAAALA-- 396 (433)
T ss_pred hCCCCCceEEEEEecC-CH---------------HHHHHHHHhC-CcceeccccCCCCceeeCCCccCcccCCHHHHH--
Confidence 1135677887754 11 1234555555 45555555554332 1221111122222111
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
..|+.++.||||++.-..++=++.+.++|+.
T Consensus 397 -------~~Gi~~~liRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 397 -------AAGIGEGTIRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred -------hcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 2566789999999975544445555555554
No 136
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.90 E-value=4.8e-21 Score=206.18 Aligned_cols=335 Identities=17% Similarity=0.168 Sum_probs=226.7
Q ss_pred chHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHH
Q 038499 49 SSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASN 128 (609)
Q Consensus 49 ~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~ 128 (609)
.+.+..+..+..+.+-.....+ | .+..++-.......+....+.+...+..-..+++ ....+..+.+++..
T Consensus 38 ~p~~~v~~~l~~~~~~d~~~~~---~-~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~-----~~p~a~~~E~~~v~ 108 (460)
T COG0076 38 EPLEEVLDELAELLIKDELYLD---G-HPRANLAGFCPTRVPPVAAELLVSALNKNLGDPD-----ESPAAAELEERVVN 108 (460)
T ss_pred CchhhHHHHHHHHhhccccccc---C-CcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcc-----cChhHHHHHHHHHH
Confidence 3467777777777543221112 1 1223333344445555556666555543223232 23367889999999
Q ss_pred HHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHh-hhcCCCceEEEECCCCccchHHHHHHcCceEEE
Q 038499 129 YIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIK-CLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVE 207 (609)
Q Consensus 129 ~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~-~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~ 207 (609)
++++++|++.+....||.+||.+++..+..+... ++.+... ...+++.|+|+++...|+|...+++..|.+++.
T Consensus 109 ~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~-----~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~ 183 (460)
T COG0076 109 MLSDLLGAPEEASGTFTSGGTEANLLALLAARER-----WRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRR 183 (460)
T ss_pred HHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHH-----HHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCcee
Confidence 9999999975546789967777766666544321 1111111 234455678999999999999999999999999
Q ss_pred EecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCC--
Q 038499 208 IGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSG-- 284 (609)
Q Consensus 208 v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~-- 284 (609)
++.++ +..+|+++|+++|+++...+ +|+.++++++||.+.|+++|+++|+++++++|||+|.++...++.-...
T Consensus 184 v~~~~~~~~id~~~l~~~i~~~t~~g---~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 184 VPTVPTDYRIDVDALEEAIDENTIGG---VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred EEeccCccccCHHHHHHHHHhhccCc---eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 99988 79999999999999632211 4888899999999999999999999999999999998876665422211
Q ss_pred --CCCCccEEEEcCCCCCCCCCCcEEEEEech-hhc-cCCCC-CCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 285 --QTDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQ-LGSFP-PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 285 --~~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~-l~~~~-p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
...++|.+++++|||+..|.|+|+++++++ .+. ..... ++..|+....+. ..++..-
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~t------------------i~~sr~~ 322 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFT------------------ILGSRPG 322 (460)
T ss_pred hcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCcee------------------Eeeccch
Confidence 235789999999999999999999999988 321 11122 222221211110 1122211
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEecc
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
...+.+-..+......|+..+.++..++++++.+.|.+++.++++.+ +.+++++|...+
T Consensus 323 ~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~---p~l~~V~fr~~~ 381 (460)
T COG0076 323 RQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE---PELPIVAFRLKD 381 (460)
T ss_pred HHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC---CccceEEEEcCC
Confidence 12222222222223467888999999999999999999988999986 489999999954
No 137
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=8.7e-22 Score=211.08 Aligned_cols=334 Identities=13% Similarity=0.020 Sum_probs=216.0
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG--QEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
+..+.+++.+.+.. ... .|....+..++++.+.+++.+.+|.+ ++++|++| +|+++++..++..+
T Consensus 39 ~~~~~~~~~~~~~~----~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~~------- 105 (387)
T PRK07777 39 PPEMLEAAQEAIAG----GVN-QYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVT-VGATEAIAAAVLGL------- 105 (387)
T ss_pred CHHHHHHHHHHHhc----CCC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcHHHHHHHHHHh-------
Confidence 44566666555432 111 12222233455555555666666764 33369998 78888888777665
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC---CCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD---GLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~---g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+++|| .|++..+.|+.+...++..|++++.++.+++ +.+|+++|++++. ++++++++++++|
T Consensus 106 --------~~~gd--~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~l~~p~N 170 (387)
T PRK07777 106 --------VEPGD--EVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-----PRTRALIVNSPHN 170 (387)
T ss_pred --------cCCCC--EEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-----cccEEEEEcCCCC
Confidence 36888 6888888898888888889999999998754 4689999999987 5789999999999
Q ss_pred ccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEechh
Q 038499 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTKAL 315 (609)
Q Consensus 245 ~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~ 315 (609)
|||.+.+ +++|.++|++|++++|+|++++... ....+.... ..+.++++.|++|.+|.|+ ++|++++++++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l 250 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPL 250 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHH
Confidence 9999976 6788999999999999999975311 111122111 1245788999999998553 48999998877
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
++.+.... .......+...+.+. ..++.......+.+++..++.++++.+.|
T Consensus 251 --~~~~~~~~------------------------~~~~~~~~~~~q~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 302 (387)
T PRK07777 251 --IAAVRAAK------------------------QYLTYVGGAPFQPAV--AHALDHEDAWVAALRDSLQAKRDRLAAGL 302 (387)
T ss_pred --HHHHHHHH------------------------hhcccCCCCHHHHHH--HHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 32221100 000011112222211 11111111234556677788888899999
Q ss_pred CCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 396 LPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
.++ ++++..+ ..+++.+...+ +. ...+..++++.|.+++||.+.+|..|..+...
T Consensus 303 ~~~-~~~~~~~----~g~~~~~~~~~-~~-------------~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~------ 357 (387)
T PRK07777 303 AEA-GFEVHDS----AGTYFLCADPR-PL-------------GYDDGTEFCRALPERVGVAAIPMSVFYDPADA------ 357 (387)
T ss_pred HhC-CCCccCC----CcceEEEeccc-cc-------------CCCCHHHHHHHHHHhCCEEEeCchHhCCCCcC------
Confidence 876 6666544 23445443322 10 00256788888876689999998766421000
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||+++. ++++++..++.|+.++.+
T Consensus 358 ------------------~~~~~Ri~~~~--~~~~l~~~l~~l~~~~~~ 386 (387)
T PRK07777 358 ------------------WNHLVRFAFCK--RDDTLDEAIRRLRALRGR 386 (387)
T ss_pred ------------------CCCeEEEEecC--CHHHHHHHHHHHHHHhcC
Confidence 24799999973 788999999988876643
No 138
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=3.2e-21 Score=206.89 Aligned_cols=344 Identities=13% Similarity=0.069 Sum_probs=218.3
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~ 154 (609)
++.+..+... ..++.+.+++.+.+...+ . .|....+..++.+.+.+.+...+|. .++++|++| +|+++++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~----~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it-~G~~~al~ 105 (391)
T PRK07309 32 ILKLTLGEPDFTTPDHVKEAAKRAIDANQ----S-HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVT-IGATEALS 105 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CChHHHHH
Confidence 4444433322 235567777776654211 0 0111112234444444444444454 233479998 78888999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhhccCCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~ 233 (609)
.++..+ +++|| .|++..+.|+.+...++..|++++.++.+.+ +.+|+++|++++++. .++
T Consensus 106 ~~~~~~---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~ 166 (391)
T PRK07309 106 ASLTAI---------------LEPGD--KVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQ--GDK 166 (391)
T ss_pred HHHHHh---------------cCCCC--EEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhcc--CCC
Confidence 888776 37888 6899999999988888889999999998764 478999999998732 136
Q ss_pred ceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCCCCCCCCC-C
Q 038499 234 PILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTHKFLGGPG-S 305 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (609)
++++++++|+||||.+.+ +++|+++|++||+++|+|++++... ...++.... ....+++.|++|.+|.|+ .
T Consensus 167 ~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlR 245 (391)
T PRK07309 167 LKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWR 245 (391)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccce
Confidence 899999999999999977 7788999999999999999976422 111222111 123477889999998553 4
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY-IGHEVIKKQE 384 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~-~g~~~i~~~~ 384 (609)
+|+++.++++ ++.+... ......+++.+.+.+ +..+ +.+. ......+++.
T Consensus 246 vG~~v~~~~~--~~~~~~~------------------------~~~~~~~~~~~~q~~--~~~~-l~~~~~~~~~~~~~~ 296 (391)
T PRK07309 246 IGLIFAPAEF--TAQLIKS------------------------HQYLVTAATTMAQFA--AVEA-LTNGKDDALPMKKEY 296 (391)
T ss_pred eEEEEeCHHH--HHHHHHH------------------------HhhcccCCChHHHHH--HHHH-HhCChhHHHHHHHHH
Confidence 9999999888 3332110 000001222333321 2222 2221 1123445566
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
++.++++.+.|+++ ++.+..+ ..+++.|...+ .. ...+..++++.|.++.||.+.+|..+.
T Consensus 297 ~~~~~~~~~~l~~~-~~~~~~p----~gg~~~~~~l~-~~-------------~~~~~~~~~~~l~~~~gv~v~pg~~f~ 357 (391)
T PRK07309 297 IKRRDYIIEKMTDL-GFKIIKP----DGAFYIFAKIP-AG-------------YNQDSFKFLQDFARKKAVAFIPGAAFG 357 (391)
T ss_pred HHHHHHHHHHHHHC-CCeecCC----CeeEEEEEECC-CC-------------CCCCHHHHHHHHHHhCCEEEeCchhhC
Confidence 66778888888876 6776654 23454444333 11 012356777766566799999887553
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.. .++++||+++. +.++++..+++|+.++++
T Consensus 358 ~~---------------------------~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 358 PY---------------------------GEGYVRLSYAA--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred CC---------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 11 24899999984 678999999999888754
No 139
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.90 E-value=6.1e-21 Score=205.80 Aligned_cols=364 Identities=13% Similarity=0.035 Sum_probs=224.6
Q ss_pred HHHHHHHHHhhccCCCccccCCCCCCceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHH
Q 038499 51 SEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE 125 (609)
Q Consensus 51 ~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e 125 (609)
....++.+++.+.... .++++-|.-+.. -+.|+.+.+++.+.+... ....|....+ ..+
T Consensus 15 ~~~~~~~~~~~~~~~~--------~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~----~~~~Y~~~~G----~~~ 78 (409)
T PLN00143 15 IDDAVKFLKENFNEDD--------HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA----KFNSYAPTGG----ILP 78 (409)
T ss_pred HHHHHHHHHHhcccCC--------CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc----CCCCCCCCCC----CHH
Confidence 4555777777552111 124555554443 367888888888766531 0000111111 334
Q ss_pred HHHHHHHHh----C--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH
Q 038499 126 ASNYIKKCL----G--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR 199 (609)
Q Consensus 126 ~r~~ia~~~----g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (609)
+|+.+++++ | .+++ +|++| +|+++++..++.++ +++|| .|++..+.|+.+...++
T Consensus 79 lr~aia~~~~~~~g~~~~~~-~I~it-~G~~~al~~~~~~l---------------~~~gd--~v~v~~P~y~~~~~~~~ 139 (409)
T PLN00143 79 ARRAIADYLSNDLPYQLSPD-DVYLT-LGCKHAAEIIIKVL---------------ARPEA--NILLPRPGFPDVETYAI 139 (409)
T ss_pred HHHHHHHHHHhhcCCCCCHh-hEEEe-cChHHHHHHHHHHH---------------cCCCC--EEEEcCCCCcCHHHHHH
Confidence 566666665 3 4555 89998 89999999998877 37888 69999999999888888
Q ss_pred HcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC
Q 038499 200 QSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 200 ~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~ 274 (609)
..|++++.+++++ +..+|+++|+++++ .+++++++++|+||||.+.+ +++|+++|++|++++|+|+++..
T Consensus 140 ~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~ 214 (409)
T PLN00143 140 FHHLEIRHFDLLPEKGWEVDLDAVEAIAD-----ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGH 214 (409)
T ss_pred HcCCEEEEEeccCCCCCcCCHHHHHHhcc-----cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccc
Confidence 9999999999853 45789999999887 57899999999999999988 56688889999999999999763
Q ss_pred Ccc---c-ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEe-c-hhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 275 PYV---E-IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMT-K-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 275 ~~~---~-id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~-~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
-.. + ..+........-+++.|++|.++.|+ .+|+++++ + .+ ++...-. ..+..
T Consensus 215 l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~--~~~~~~~------------------~~~~~ 274 (409)
T PLN00143 215 IVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGL--LQICEIA------------------DSIKK 274 (409)
T ss_pred cccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhh--hhhHHHH------------------HHHHH
Confidence 211 1 11111111122467789999987664 59999984 3 22 1110000 00000
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTIN 425 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~ 425 (609)
........+.+.+. ++..+ +.+ ...++...++.++.++++.+.|.++++...... +..+++.|.-.+ ...
T Consensus 275 -~~~~~~~~~~~~q~--a~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~---p~gg~f~w~~l~-~~~ 346 (409)
T PLN00143 275 -ALNPAPFPPTFIQA--AIPEI-LEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQK---AEGAFFALVKLN-LLL 346 (409)
T ss_pred -HHhccCCCCchHHH--HHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC---CCeeEEEEEecc-hhh
Confidence 00000111222222 22222 221 123455666677777788888887754332221 234555555443 100
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.....+..+++..|..+.||.+++|..|. .++++||+++
T Consensus 347 ----------~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------------~~~~iRi~~~-- 385 (409)
T PLN00143 347 ----------LEDIEDDMEFCLKLAKEESLIILPGVTVG-----------------------------LKNWLRITFA-- 385 (409)
T ss_pred ----------cCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------------CCCeEEEEEc--
Confidence 00001344555555456799999987652 1489999998
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 038499 506 MSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 506 ~t~eeid~ll~al~~v~~ 523 (609)
.++++++..++.|+.+++
T Consensus 386 ~~~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 386 VEQSSLEDGLGRLKSFCG 403 (409)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 468889999999888775
No 140
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.90 E-value=2.1e-21 Score=206.09 Aligned_cols=326 Identities=14% Similarity=-0.004 Sum_probs=215.1
Q ss_pred ceEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+++.|+.+.. -+.|+.+.+++.+.+......+. .. ..++|+.|+++++.+++ +|++| +|++++|..
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~----------~~-~~~Lr~aia~~~~v~~~-~I~it-~G~~~~i~~ 89 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSALRHYPD----------PD-YRELRLALAQHHQLPPE-WILPG-NGAAELLTW 89 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCC----------cC-HHHHHHHHHHHhCcChh-hEEEC-CCHHHHHHH
Confidence 4567775544 34556777877765542111111 11 34788999999999887 89988 899999998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCC-----CCHHHHHHHHhhhcc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGL-----LDIEALRSKLELYKD 230 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~-----ld~e~L~~al~~~~~ 230 (609)
++..+ .+|| .|++..+.|+.+...++..|++++.++++.++. .+++++++..
T Consensus 90 ~~~~l----------------~~g~--~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----- 146 (360)
T PRK07392 90 AGREL----------------AQLR--AVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----- 146 (360)
T ss_pred HHHHh----------------CCCC--eEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-----
Confidence 87765 3566 688899999999999999999999999976443 3566655432
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc---ccC-CCCCCCCccEEEEcCCCCCCCC-CC
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE---IDV-RSGQTDGYDAIFLSTHKFLGGP-GS 305 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~---id~-~~~~~~~~D~v~~S~hK~lggp-~g 305 (609)
.+++++++++++||||.+.+.++|.++++++++ +|+|+++..-... ..+ ........-+++.|++|.+|-| ..
T Consensus 147 -~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlR 224 (360)
T PRK07392 147 -TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLR 224 (360)
T ss_pred -cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchh
Confidence 367899999999999999999999999999985 6669996532110 110 0011112247778999999844 46
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|++++++++ ++.+... +...+.+.+.+.+ +..++++....+.+.++.+
T Consensus 225 iG~~v~~~~~--~~~~~~~--------------------------~~~~~~s~~~q~~---~~~~l~~~~~~~~~~~~~~ 273 (360)
T PRK07392 225 LGYAIAHPDR--LQRWQQW--------------------------RDPWPVNGLAAAA---AIAALADRDFQQQTWAWLP 273 (360)
T ss_pred eeeeeCCHHH--HHHHHhh--------------------------CCCCCCCHHHHHH---HHHHhccHHHHHHHHHHHH
Confidence 9999998877 3332111 0001222233221 1112222222344455667
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+.++++.+.|+.++++.+..+ . +++.+.-.+ .+..++++.|.++.||.+++|..+.+
T Consensus 274 ~~r~~l~~~L~~~~~~~~~~~----~-~~fl~~~~~------------------~~~~~l~~~ll~~~gv~v~pg~~f~~ 330 (360)
T PRK07392 274 PAREALFQGLASLPGLTPLPS----A-ANFLLVQSQ------------------GSALQLQEKLLQQHRILIRDCLSFPE 330 (360)
T ss_pred HHHHHHHHHHHhCCCcEECCC----C-CCEEEEEcC------------------CCHHHHHHHHHhhCCEEEEeCCCCCC
Confidence 778888899988888877532 2 344443332 13567777765667999998876531
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
. .++++||+++ +.++.+++.++|+.+.++
T Consensus 331 ~---------------------------~~~~iRi~~~---~~~~~~~l~~al~~~~~~ 359 (360)
T PRK07392 331 L---------------------------GDRYFRVAVR---TEAENQRLLEALAAILAN 359 (360)
T ss_pred C---------------------------CCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 1 2589999997 677788999999887653
No 141
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=2.6e-21 Score=206.82 Aligned_cols=340 Identities=17% Similarity=0.077 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
..++++.+++++|.+. .++++ +| ++++..++.+++ +++|| .|++++++|++...++...|
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~-sg-t~al~~~l~al~--------------~~~Gd--~Viv~~~~~~~~~~~~~~~G 90 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFN-SA-TSALHIACLALG--------------VGPGD--RVWTTPITFVATANCALYCG 90 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEc-CH-HHHHHHHHHHcC--------------CCCCC--EEEeCCcchHHHHHHHHHcC
Confidence 5778999999999852 45544 55 557888888775 47898 69999999999988888999
Q ss_pred ceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccC
Q 038499 203 AEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV 281 (609)
Q Consensus 203 ~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~ 281 (609)
++++.+++++ ++.+|+++|++++++. ..+++++++++ |++|...|+++|.++|++||+++|+|++|+.|.. ++.
T Consensus 91 ~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~~ 165 (380)
T TIGR03588 91 AKVDFVDIDPDTGNIDEDALEKKLAAA-KGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YGG 165 (380)
T ss_pred CEEEEEecCCCcCCcCHHHHHHHhhcc-cCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cCC
Confidence 9999999975 6789999999999732 11267877754 4689999999999999999999999999998865 444
Q ss_pred CCCCC-CCccEEEEcCC--CCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccc-ccccccccccccccCCCh
Q 038499 282 RSGQT-DGYDAIFLSTH--KFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNE-KDTLYLEDIEERESGGTP 357 (609)
Q Consensus 282 ~~~~~-~~~D~v~~S~h--K~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~-~~~~~~~~~~~r~~~gtp 357 (609)
.+... ...|+.++|+| |+++++.| |+++.+++.. .+.+++...+|........... ....++. ....|..
T Consensus 166 ~~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~g~n 239 (380)
T TIGR03588 166 KPVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEEL-AERMRLLRSHGITKDPLLFEKQDEGPWYYE----QQELGFN 239 (380)
T ss_pred EeCCCccccceEEEecCCCCcccccCc-eEEEECCHHH-HHHHHHHHHCCCCCCcccccccccCcceee----eeccccc
Confidence 44311 12399999988 99986664 7777654431 2223222222211000000000 0000110 0011111
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEe-ccCCCCCcCCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI-HSSTINSSLGENTKTET 436 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~-~~~~~~~~~~~~~~~~~ 436 (609)
.-+.-+.+++.+. +....+.+.++.+++++++.+.|+.+|++.++.+..........+.+ .. .
T Consensus 240 ~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-~------------- 303 (380)
T TIGR03588 240 YRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLD-Q------------- 303 (380)
T ss_pred cCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEEC-C-------------
Confidence 0011112222211 11236788889999999999999999888765442111122222222 22 1
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCC--hhhhhh-cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAG--PYGHHL-LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~--p~~~~l-l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
+...+.+.+.+.|.+ .||.++..+.+-. |+.... ...+.+.++.+ ....++++++..+|++|+++
T Consensus 304 ~~~~~r~~l~~~L~~-~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~-----------~~~~l~lP~~~~l~~~dv~~ 371 (380)
T TIGR03588 304 EFGCTRKEVFEALRA-AGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENF-----------YLAEISLPLHPALTLEQQQR 371 (380)
T ss_pred cCCCCHHHHHHHHHH-CCCCcccCCcccccChhhhccCCcCCCcHHHHH-----------HhceEEcCCCCCCCHHHHHH
Confidence 011467899999965 6999987654321 211110 01111223322 24789999999999999999
Q ss_pred HHHHHHHH
Q 038499 514 TLEALEFI 521 (609)
Q Consensus 514 ll~al~~v 521 (609)
++++|+++
T Consensus 372 i~~~l~~~ 379 (380)
T TIGR03588 372 VVETLRKV 379 (380)
T ss_pred HHHHHHHh
Confidence 99999876
No 142
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=1.8e-21 Score=209.11 Aligned_cols=342 Identities=14% Similarity=0.058 Sum_probs=213.9
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC----CCCCCcEEEeCChHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG----GGQEDAMIFCGSGTTA 151 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g----~~~~~~vift~sGtta 151 (609)
+.+.|+.+... ..++.+.+++.+.+......+. ..+..++++.+.+++.+.+| .+++++|++| +|+++
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it-~Ga~~ 101 (393)
T TIGR03538 29 PPIALSIGEPKHPTPAFVLEALRENLHGLSTYPT------TKGLPELRQAIARWLERRFDLPTGVDPERHVLPV-NGTRE 101 (393)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCC------CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEEC-CCcHH
Confidence 45566554433 3466788888776532211111 11123333334444434334 4443368887 89999
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhc
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYK 229 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~ 229 (609)
++..++..+ +++||...|+++.+.|+.+...++..|++++.++++++ ..+|++++++++.
T Consensus 102 al~~~~~~l---------------~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--- 163 (393)
T TIGR03538 102 ALFAFAQAV---------------INPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW--- 163 (393)
T ss_pred HHHHHHHHH---------------cCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---
Confidence 999998876 37888545899999998888888889999999998643 4689999999887
Q ss_pred cCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc-----cccC----CCCC--CCCccEEEEc
Q 038499 230 DAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-----EIDV----RSGQ--TDGYDAIFLS 295 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~-----~id~----~~~~--~~~~D~v~~S 295 (609)
.+++++++++++||||.+.+ +++|+++|++||+++|+|+++..... +..+ .... ....-+++.|
T Consensus 164 --~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 --RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred --hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 47899999999999999988 57788899999999999999753211 1110 0010 0012377889
Q ss_pred CCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh
Q 038499 296 THKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY 374 (609)
Q Consensus 296 ~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~ 374 (609)
++|.++.|+ .+|+++.++++ ++.+... ......+.+.+.+.+. +..+ ...
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~l--~~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l-~~~ 292 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAEI--LKAFLRY------------------------RTYHGCAMPIPTQLAS--IAAW-NDE 292 (393)
T ss_pred chhhcCCcccceEEEecCHHH--HHHHHHH------------------------HHhhccCcCHHHHHHH--HHHh-cCh
Confidence 999766553 59999998877 3322110 0000112222333221 1222 122
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcC
Q 038499 375 IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFG 454 (609)
Q Consensus 375 ~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~G 454 (609)
...+..+++.++.++.+.+.|... +.+.. +..+++.|.-.+ .+...+++.|.++.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~----p~gg~f~~~~~~------------------~~~~~~~~~l~~~~g 348 (393)
T TIGR03538 293 QHVRENRALYREKFAAVLEILGQV--LDLEL----PDAGFYLWPKVP------------------GDDEAFARALYEEEN 348 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--CcccC----CCeeEEEEEECC------------------CCHHHHHHHHHHHCC
Confidence 234555666677777777777653 22222 244555555443 135677877766679
Q ss_pred cEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 455 IQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 455 I~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
|.+.+|..|....... . -.++++||++.. ++++++..+++|+..
T Consensus 349 V~v~pg~~f~~~~~~~--~-------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 349 VTVLPGRFLAREAEGV--N-------------------PGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred EEEeCCccccccccCC--C-------------------CCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 9999998764210000 0 024799999974 688888888888753
No 143
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.3e-21 Score=208.75 Aligned_cols=337 Identities=15% Similarity=0.011 Sum_probs=217.3
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
++.+.+++.+.+... . . .|....+..++++.+.+++++.+|. .++ +|++| +|++.++..++..+
T Consensus 48 ~~~~~~~~~~~~~~~---~-~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~~------- 113 (402)
T PRK06107 48 PDHIKQAAVAAIERG---E-T-KYTLVNGTPALRKAIIAKLERRNGLHYADN-EITVG-GGAKQAIFLALMAT------- 113 (402)
T ss_pred CHHHHHHHHHHHHcC---C-C-CCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEe-CCHHHHHHHHHHHh-------
Confidence 566777777665421 1 1 1222223456677777788877776 344 89998 88888999887655
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|+++++.|+.+.......+++++.++.+. ++.+|+++|++++. ++++++++++++||
T Consensus 114 --------~~~gd--~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~NP 178 (402)
T PRK06107 114 --------LEAGD--EVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-----PRTRWLILNAPSNP 178 (402)
T ss_pred --------cCCCC--EEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-----cCceEEEEECCCCC
Confidence 47888 799999888887777777888888888753 35689999999887 57899999999999
Q ss_pred cccccCH---HHHHHHHHHh-CCeEEEeccccCCc----ccccCCCCCC--CCccEEEEcCCCCCCCCC-CcEEEEEech
Q 038499 246 TGIYSDT---RSIARLLHQY-GGFACFDFAASGPY----VEIDVRSGQT--DGYDAIFLSTHKFLGGPG-SPGILLMTKA 314 (609)
Q Consensus 246 TG~~~dl---~~I~~la~~~-g~~vivD~A~~~~~----~~id~~~~~~--~~~D~v~~S~hK~lggp~-g~G~L~~~~~ 314 (609)
||.+.+. ++|+++|++| |+++|+|++++.-. ....+..... .+..+++.|++|.+|.|+ .+|+++++++
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~ 258 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPAD 258 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHH
Confidence 9999875 5678889998 99999999875211 0111111101 123567779999997554 4899999988
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~~~~ 393 (609)
+ ++.+... ......+...+.+.+ +..++.+ ....+...+..++.++.+.+
T Consensus 259 ~--~~~~~~~------------------------~~~~~~~~s~~~q~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK06107 259 L--IAAINKL------------------------QSQSSSCPSSISQAA---AAAALNGDQSFVTESVAVYKQRRDYALA 309 (402)
T ss_pred H--HHHHHHH------------------------HHhcccCCChHHHHH---HHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 7 3333211 000111223333322 1222211 11234556666777888888
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC-CCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK-PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~-~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
.|++++++.+..+ ..+.+.|...+ ...+. ....+. ..+..+++..|.++.||.+++|..|.
T Consensus 310 ~L~~~~g~~~~~p----~gg~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg-------- 371 (402)
T PRK06107 310 LLNAIPGLSCLVP----DGAFYLYVNCA-GLIGK-----TTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYG-------- 371 (402)
T ss_pred HHhcCCCCcccCC----CcceEEeeecc-ccccc-----ccccccCCCCHHHHHHHHHHhCCEEEeCccccC--------
Confidence 8988778777654 33555554332 10000 000000 11345666666666799999887653
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++ .++++++..++.|.++++++
T Consensus 372 ---------------------~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 372 ---------------------LSPYFRLSIA--TSLETLEEACARIERAVAAL 401 (402)
T ss_pred ---------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 1479999998 47899999999998887654
No 144
>PLN02822 serine palmitoyltransferase
Probab=99.90 E-value=2.9e-21 Score=211.44 Aligned_cols=339 Identities=16% Similarity=0.105 Sum_probs=227.3
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.|.+++.+.+..+ +. +...+...+.+.+...++++.|++++|.+ +.|+|+ +|.++ +..++.++
T Consensus 124 ~~~~i~ea~~~al~~~-G~-g~~g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s-~G~~a-~~sai~a~-------- 189 (481)
T PLN02822 124 GNEKIKESCTSALEKY-GV-GSCGPRGFYGTIDVHLDCETKIAKFLGTP--DSILYS-YGLST-IFSVIPAF-------- 189 (481)
T ss_pred CCHHHHHHHHHHHHHh-CC-CCcccCccccCHHHHHHHHHHHHHHhCCC--CEEEEC-CHHHH-HHHHHHHh--------
Confidence 4678999998888753 22 11111122346778999999999999975 378888 66664 45555555
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC----CCc-eEEEEeccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA----KRP-ILGSFSACS 243 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~----~~~-~lv~~s~~s 243 (609)
.++|| +|++....|.+.....+..+++++.++.+ |.++++..+++.... +++ ++++++.++
T Consensus 190 -------~~~gd--~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 190 -------CKKGD--IIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred -------CCCCC--EEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 37888 79999999999888888889999999876 566666666532111 235 699999999
Q ss_pred CccccccCHHHHHHHHHHhCCeEEEeccccCCccc---------ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE---------IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 244 n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~---------id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
++||.+.|+++|.++|++||+++++|++|+.+... .++. ...+|+++.|++|.+| +.| |+++++++
T Consensus 256 ~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~---~~~~dii~~s~sKalg-~~G-G~i~g~~~ 330 (481)
T PLN02822 256 QNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVP---IEKIDIITAAMGHALA-TEG-GFCTGSAR 330 (481)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCC---CCCCeEEEecchhhhh-hCC-eEEEcCHH
Confidence 99999999999999999999999999999855422 1111 1257999999999998 444 89999888
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM-IRAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
+ ++.+... +.+. .+....|+..+. ..+++... +. .+.+.++.+++++++.+
T Consensus 331 i--i~~~~~~--~~~~--------------------~fsa~lPp~~~~Aa~~aL~~l--~~--~~~~~~~l~~~~~~l~~ 382 (481)
T PLN02822 331 V--VDHQRLS--SSGY--------------------VFSASLPPYLASAAITAIDVL--ED--NPSVLAKLKENIALLHK 382 (481)
T ss_pred H--HHHHHhc--CCce--------------------eeccccCHHHHHHHHHHHHHH--Hh--CHHHHHHHHHHHHHHHH
Confidence 7 3332211 0000 111222333332 22333332 21 25677889999999999
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.|++++|+.+..+ ...+++.+.+.. ..... .+.-.....+++.|.++.||.+.++..... +
T Consensus 383 ~L~~~~g~~~~~~---~~spi~~l~l~~-~~~~~--------~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~-------~ 443 (481)
T PLN02822 383 GLSDIPGLSIGSN---TLSPIVFLHLEK-STGSA--------KEDLSLLEHIADRMLKEDSVLVVVSKRSTL-------D 443 (481)
T ss_pred HHHhcCCcccCCC---CCCCEEEEEeCC-Ccccc--------cchHHHHHHHHHHHHhcCCEEEEeeCCCCc-------C
Confidence 9998878877654 356777776643 10000 000001356788877557999986532110 0
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
. +..+.++|++++..+|++||++++++|++++..
T Consensus 444 ~-----------------~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 444 K-----------------CRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred C-----------------CCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 0 001357999999999999999999999988765
No 145
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=5.6e-22 Score=209.78 Aligned_cols=320 Identities=14% Similarity=0.056 Sum_probs=211.1
Q ss_pred ceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
..+.|+.+.... .++.+.+++.+.+......+. ....++|+.+++++|++++ +|+++ +|+++++..
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----------~g~~~lr~~ia~~~~~~~~-~I~~~-~G~~~~l~~ 89 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPD-----------MGAVELRAALAEHLGVPPE-HVAVG-CGSVALCQQ 89 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CcHHHHHHHHHHHhCcCHH-HEEEC-CCHHHHHHH
Confidence 456777664433 455788888766542211111 1257899999999998876 89987 899998888
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +++|| .|+++.+.|..+...++..|++++.++.++++.+|+++++++++ ++++
T Consensus 90 ~~~~~---------------~~~gd--~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-----~~~~ 147 (352)
T PRK03321 90 LVQAT---------------AGPGD--EVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-----DRTR 147 (352)
T ss_pred HHHHh---------------cCCCC--EEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-----cCCC
Confidence 87765 47888 68888887777766778889999999998678899999999987 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGI 308 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (609)
++++++++||||.+.|.++|.++|+. +|+++++|+++..... +..+.......--+++.|++|.+|.|+ .+|+
T Consensus 148 ~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 227 (352)
T PRK03321 148 LIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGY 227 (352)
T ss_pred EEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhh
Confidence 99999999999999999999999997 5999999999753211 011111101122356679999998443 5899
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+++++++ ++.+.... ...+.+.+.+.+ +++.+.......+. .++..+.+
T Consensus 228 ~v~~~~~--~~~~~~~~--------------------------~~~~~s~~~q~~--a~~~l~~~~~~~~~-~~~~~~~r 276 (352)
T PRK03321 228 AVGHPEV--IAALRKVA--------------------------VPFSVNSLAQAA--AIASLAAEDELLER-VDAVVAER 276 (352)
T ss_pred hcCCHHH--HHHHHHhc--------------------------CCCCCCHHHHHH--HHHHhcCHHHHHHH-HHHHHHHH
Confidence 9998877 33322110 001122222221 11111111111222 23333445
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|... ++.+..+ ...++++.+ + .+...+.+.|.+ .||.+++ |.
T Consensus 277 ~~~~~~L~~~-~~~~~~~----~g~~i~i~l-~------------------~~~~~~~~~l~~-~gI~v~~---~~---- 324 (352)
T PRK03321 277 DRVRAALRAA-GWTVPPS----QANFVWLPL-G------------------ERTADFAAAAAE-AGVVVRP---FA---- 324 (352)
T ss_pred HHHHHHHHHC-CCccCCC----CCCEEEEeC-C------------------CCHHHHHHHHHH-CCEEEEc---cC----
Confidence 6677777765 5554322 233333332 3 135678888854 7999983 21
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+.++||+++ +.+++++++++|+.+.+
T Consensus 325 --------------------------~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 325 --------------------------GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred --------------------------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 246999986 99999999999998754
No 146
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=4e-21 Score=203.31 Aligned_cols=309 Identities=17% Similarity=0.064 Sum_probs=207.6
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
|+.+.+++.+.+..... | .. . ...++|+.++++++.+++ +|++| +|+++++..++.++
T Consensus 34 p~~~~~a~~~~~~~~~~------Y-~~---~-~~~~lr~~ia~~~~~~~~-~i~it-~Ga~~~l~~~~~~~--------- 91 (354)
T PRK06358 34 PESLKQAITENLDKLVE------Y-PD---P-DYLELRKRIASFEQLDLE-NVILG-NGATELIFNIVKVT--------- 91 (354)
T ss_pred CHHHHHHHHHHHHhhhc------C-CC---c-cHHHHHHHHHHHhCCChh-hEEEC-CCHHHHHHHHHHHh---------
Confidence 56777887765532211 1 11 1 146899999999999887 89998 89999999887765
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccCCCceEEEEecccCccc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDAKRPILGSFSACSNVTG 247 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG 247 (609)
.+ + .|++..+.|+.+...++..|++++.++.+.+ ..+| +++.+.+. .+++++++++|+||||
T Consensus 92 -------~~-~--~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-----~~~~~v~~~~P~NPtG 155 (354)
T PRK06358 92 -------KP-K--KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-----EEIDLVFLCNPNNPTG 155 (354)
T ss_pred -------CC-C--cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-----cCCCEEEEeCCCCCCC
Confidence 23 3 3778888998888888889999999998753 3678 66666665 4689999999999999
Q ss_pred cccC---HHHHHHHHHHhCCeEEEeccccCCccc---cc-CCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEe-chhhcc
Q 038499 248 IYSD---TRSIARLLHQYGGFACFDFAASGPYVE---ID-VRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMT-KALYQL 318 (609)
Q Consensus 248 ~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~---id-~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~-~~~~~l 318 (609)
.+.+ +++|+++|++||+++++|+++.--... .. +........-+++.|++|.+|-| ..+|+++++ +.+ +
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~--~ 233 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNL--A 233 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHH--H
Confidence 9987 667888899999999999996522110 11 11111112347778999999844 459999985 454 1
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
+.+... +...+...+.+.+ ....+.+....+...+..++.++++.+.|+++
T Consensus 234 ~~~~~~--------------------------~~~~~~~~~~q~~---~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 284 (354)
T PRK06358 234 EKLLQM--------------------------REPWSINTFADLA---GQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF 284 (354)
T ss_pred HHHHHh--------------------------CCCCcchHHHHHH---HHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 222110 0001111222221 11112121123555666677788899999888
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhH
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~ 478 (609)
+++.+..+ ..+++ |...+ +..++.+.|.+ .||.+++|..+.+.
T Consensus 285 ~~~~~~~~----~g~f~-~~~~~-------------------~~~~~~~~l~~-~gI~v~~~~~f~~~------------ 327 (354)
T PRK06358 285 KGIKVYKP----SVNFI-FFKLE-------------------KPIDLRKELLK-KGILIRSCSNYRGL------------ 327 (354)
T ss_pred CCcEEcCC----cceEE-EEEcC-------------------chHHHHHHHHH-CCeEEEECCCCCCC------------
Confidence 88777654 23433 33333 23678888876 59999988765310
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.++++||+++ +.++.++++++|+.+.
T Consensus 328 ---------------~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 328 ---------------DENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred ---------------CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 2479999997 9999999999998865
No 147
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=9.8e-22 Score=210.02 Aligned_cols=303 Identities=17% Similarity=0.148 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ- 200 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~- 200 (609)
...++++.+++++|.+ +.+++ ++|+. ++..++..+ +++|| .|+++...|......+..
T Consensus 62 t~~~Le~~lA~l~G~~--~al~~-~sG~~-Ai~~~l~al---------------~~~Gd--~Vv~~~~~y~~~~~~~~~~ 120 (386)
T PRK06767 62 TVKLFEERMAVLEGGE--EALAF-GSGMA-AISATLIGF---------------LKAGD--HIICSNGLYGCTYGFLEVL 120 (386)
T ss_pred chHHHHHHHHHHhCCC--cEEEE-CCHHH-HHHHHHHHH---------------hCCCC--EEEEcCCcHHHHHHHHHHH
Confidence 3678999999999975 24555 58876 676666554 37898 699998888877655433
Q ss_pred ---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 201 ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 201 ---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
.|+++..++. .|+++++++++ +++++|++++++||||.+.|+++|.++||++|+++++|++++.+..
T Consensus 121 ~~~~gi~~~~~~~-----~d~~~l~~~i~-----~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~ 190 (386)
T PRK06767 121 EEKFMITHSFCDM-----ETEADIENKIR-----PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL 190 (386)
T ss_pred HhhcCeEEEEeCC-----CCHHHHHHhhC-----cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 4666666654 38899999997 6899999999999999999999999999999999999999887655
Q ss_pred cccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCC-CCccCCCceEeecccccccccccccccccccC
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFP-PSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~-p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
..++. .++|+++.|++|+++|++. .|+++.+++. +..+. .... ...
T Consensus 191 ~~pl~----~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~--i~~~~~~~~~-------------------------~~g 239 (386)
T PRK06767 191 QRPLE----LGCDAVVHSATKYIGGHGDVVAGVTICKTRA--LAEKIRPMRK-------------------------DIG 239 (386)
T ss_pred CCchh----cCCcEEEecCcceecCCCCceeEEEEeChHH--HHHHHHHHHH-------------------------HhC
Confidence 44432 2789999999999998875 4899998876 22211 1100 001
Q ss_pred CC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEE-eCCCC-------CCCcceEEEEeccCCCC
Q 038499 355 GT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKI-LGNTS-------TKRQAILSFNIHSSTIN 425 (609)
Q Consensus 355 gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v-~~~~~-------~~r~~~~~f~~~~~~~~ 425 (609)
+. .++. +.+.. ......+...++.++++.++.+.|+++|+++. .-|.. ....++++|.+.. ..
T Consensus 240 ~~~~~~~----a~l~~--~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~-~~- 311 (386)
T PRK06767 240 GIMAPFD----AWLLL--RGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG-GK- 311 (386)
T ss_pred CCCCHHH----HHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC-CH-
Confidence 11 1111 11111 11122345557778899999999999999874 32311 1245789998864 21
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
.....+.+.| +.+++.++-|...+ .|.......+..+... ..|+.++.||||+
T Consensus 312 --------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~l~R~sv 367 (386)
T PRK06767 312 --------------EETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAIPAELRQ---------EMGIYDNLIRLSV 367 (386)
T ss_pred --------------HHHHHHHHhC-CccEEecCCCCcCccccCCCccccccCCHHHHH---------hcCCCCCeEEEEe
Confidence 2356788888 56888888875433 1222111122222111 2567789999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 038499 503 PYYMSNEEFEFTLEAL 518 (609)
Q Consensus 503 ~~~~t~eeid~ll~al 518 (609)
+.-..++=++.+.++|
T Consensus 368 GlE~~~dl~~dl~~al 383 (386)
T PRK06767 368 GLESWEDIVSDLEQAL 383 (386)
T ss_pred ccCCHHHHHHHHHHHH
Confidence 9754433344444443
No 148
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.90 E-value=1e-21 Score=210.29 Aligned_cols=341 Identities=14% Similarity=0.093 Sum_probs=213.8
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.||++++...+.+..+.+.... .... +.+++.......++++.+++++|++.. +++ ++|+.+ +..+
T Consensus 30 ~pi~~~~~~~~~~~~~~~~~~~~-------~~~~--~~y~r~~~p~~~~Le~~lA~l~G~~~~--~~~-~sG~~A-i~~~ 96 (398)
T PRK07504 30 EALFLTQGFVYDTAEAAEARFKG-------EDPG--FIYSRYSNPTVDMFEKRMCALEGAEDA--RAT-ASGMAA-VTAA 96 (398)
T ss_pred CCeECCCCccCCCHHHHHHHhcc-------CcCC--ceeecCCCchHHHHHHHHHHHhCCCee--eEe-cCHHHH-HHHH
Confidence 56999999888877665543211 1110 111222233467899999999999754 444 478764 4443
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..+ +++|| .|+++...|.++...+. ..|++++.++ .+|+++++++++ +
T Consensus 97 l~~~---------------l~~Gd--~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-----~ 149 (398)
T PRK07504 97 ILCQ---------------VKAGD--HVVAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-----P 149 (398)
T ss_pred HHHH---------------hCCCC--EEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-----c
Confidence 3332 47899 69999988887765543 4688988885 268999999998 6
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCC-Cc-EEEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-SP-GILL 310 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~-G~L~ 310 (609)
+|++|++++++||||.+.|+++|.++|+++|+++++|++++.+.....+ . .++|++++|+||+++|++ .. |+++
T Consensus 150 ~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~-~---~gaDivv~S~sK~l~g~g~~~GG~vv 225 (398)
T PRK07504 150 NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL-E---LGAHIVVYSATKHIDGQGRCLGGVVL 225 (398)
T ss_pred CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch-h---hCCCEEEeeccccccCCccceEEEEE
Confidence 8999999999999999999999999999999999999998876543222 2 278999999999999875 34 5676
Q ss_pred EechhhccCC-CCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGS-FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 311 ~~~~~~~l~~-~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
.+++. +.. +... .+......+-. .+++.+. .........++..+++.
T Consensus 226 ~~~~~--i~~~~~~~-------------------------~~~~g~~~s~~---~A~~~l~--~L~tl~~R~~~~~~na~ 273 (398)
T PRK07504 226 SDKAW--IEEHLQDY-------------------------FRHTGPSLSPF---NAWTLLK--GLETLPVRVRQQTESAA 273 (398)
T ss_pred eCcHH--HHHHHHHH-------------------------HHHhCCCCCHH---HHHHHHh--ccchHHHHHHHHHHHHH
Confidence 66665 211 1000 00001111111 1111111 12234555666678889
Q ss_pred HHHHHhCCCCceE-EeCCCC--C-----------CCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCc
Q 038499 390 RALERLLPNQNIK-ILGNTS--T-----------KRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGI 455 (609)
Q Consensus 390 ~~~~~L~~~p~i~-v~~~~~--~-----------~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI 455 (609)
++.+.|+++|++. |+-|.- . ...++++|.+.. +. .....+++.| +.+.+
T Consensus 274 ~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~---------------~~~~~~~~~l-~~~~~ 336 (398)
T PRK07504 274 AIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG-GK---------------EAAFRFLNAL-KIVRI 336 (398)
T ss_pred HHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC-CH---------------HHHHHHHHhC-Cccee
Confidence 9999999988874 444421 1 125688888864 21 1234566666 56666
Q ss_pred EeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 456 QARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 456 ~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.+.-|...+ .|.......+.++... ..|+.++.||||++.-..++=++.+.++|+
T Consensus 337 ~~slG~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~liR~svGlE~~~dl~~dl~~al~ 394 (398)
T PRK07504 337 SNNLGDAKSLITHPATTTHKNLSPEARA---------ELGISEGFLRLSAGLEDTDDLIEDLAAALK 394 (398)
T ss_pred cccCCCCCeeeeCCCCCCcccCCHHHHH---------hcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 666665333 1221111222222111 246678999999997554444555555554
No 149
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=3.1e-21 Score=211.76 Aligned_cols=357 Identities=13% Similarity=0.101 Sum_probs=223.3
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCc-------cCCCCCCchhhHHHHHHHHHHHHHHHHHhC----CCCCCcEEEe
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFY-------GNTHTCDSYVGQHTTNMVHEASNYIKKCLG----GGQEDAMIFC 145 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~-------~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g----~~~~~~vift 145 (609)
.+|-|+.+.+..+-+.+.+.+.+...... ..++...+....+..++++.+.+.+.+..| .+++ +|++|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~Ivit 125 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RVVMS 125 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hEEEc
Confidence 58999999988877777888876543210 011111111111223344444444444434 5665 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcCceEEEEecCC--CCCCCHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSLAEVVEIGLDD--DGLLDIEALR 222 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~g~ld~e~L~ 222 (609)
+|+++++..++.++. +||| .|+++.+.|+.+...++ ..|++++.|+++. ++.+|+++++
T Consensus 126 -~Ga~~al~~l~~~l~---------------~pGD--~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le 187 (496)
T PLN02376 126 -GGATGANETIMFCLA---------------DPGD--VFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAAD 187 (496)
T ss_pred -cchHHHHHHHHHHhC---------------CCCC--EEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHH
Confidence 899999999988874 8999 79999999999887777 5799999999863 4678999998
Q ss_pred HHHhhhc-cCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCC----CCC--C
Q 038499 223 SKLELYK-DAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSG----QTD--G 288 (609)
Q Consensus 223 ~al~~~~-~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~----~~~--~ 288 (609)
+++.+.. ...+++++++++|+||||.+.+. ++|+++|++||+++|+|++++.-. ..+.+..+ ... .
T Consensus 188 ~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~ 267 (496)
T PLN02376 188 WAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVN 267 (496)
T ss_pred HHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccC
Confidence 7764211 11478989999999999999984 567889999999999999976421 11111111 000 1
Q ss_pred cc--EEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHH
Q 038499 289 YD--AIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRA 365 (609)
Q Consensus 289 ~D--~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~a 365 (609)
.+ +++.|++|.+|.| ..+|+++..++.+ ....... ... ...+.+.+.+
T Consensus 268 ~~~v~vv~S~SK~~glpGlRvG~li~~~~~l-~~~~~~~-------------------------~~~-~~vs~~~Q~a-- 318 (496)
T PLN02376 268 VDLIHIVYSLSKDMGLPGFRVGIVYSFNDSV-VSCARKM-------------------------SSF-GLVSSQTQLM-- 318 (496)
T ss_pred CCeEEEEEeccccCCCCcceEEEEEECCHHH-HHHHHHH-------------------------hhc-CCCCHHHHHH--
Confidence 12 4567999999855 4599999964441 1111000 000 1123333322
Q ss_pred HHHHHHHHhcC----HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCC
Q 038499 366 ALAFWVKEYIG----HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLH 441 (609)
Q Consensus 366 al~~~~~~~~g----~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 441 (609)
+..++.+... ....+++.++.++.+.+.|.+. ++.++.+ ..+++.|.-.+....+ ......
T Consensus 319 -~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~----~aG~flwi~l~~~~~~---------~~~~~~ 383 (496)
T PLN02376 319 -LASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTS----NAGLFAWMDLRHLLRD---------RNSFES 383 (496)
T ss_pred -HHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCC----CceEEEEEEchhhhcc---------CCchhH
Confidence 1222222111 2233555666677777888765 6666544 3456666544401100 001112
Q ss_pred hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 442 GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 442 ~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
..++++.|.++.||.+++|..|... .+||+||+++. .++++++..++.|+.+
T Consensus 384 e~~l~~~ll~~~gV~v~pGs~F~~~---------------------------~~g~~Ri~fa~-~~~~~l~~al~rl~~~ 435 (496)
T PLN02376 384 EIELWHIIIDKVKLNVSPGSSFRCT---------------------------EPGWFRICFAN-MDDDTLHVALGRIQDF 435 (496)
T ss_pred HHHHHHHHHHcCCEEEeCccccCCC---------------------------CCCEEEEEeeC-CCHHHHHHHHHHHHHH
Confidence 3567777777779999999876421 25899999974 4678899999999888
Q ss_pred HHh
Q 038499 522 AIY 524 (609)
Q Consensus 522 ~~~ 524 (609)
+..
T Consensus 436 l~~ 438 (496)
T PLN02376 436 VSK 438 (496)
T ss_pred HHH
Confidence 764
No 150
>PRK09082 methionine aminotransferase; Validated
Probab=99.90 E-value=1.3e-21 Score=209.53 Aligned_cols=329 Identities=14% Similarity=0.069 Sum_probs=220.8
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC--CCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ--EDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~--~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.++.+.+++.+.+.... . .|....+...+++.+.+++.+.+|.+. +++|++| +|++.++..++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t-~G~~~al~~~~~~~------ 111 (386)
T PRK09082 44 GPPYLVEALAYAMAAGH----N-QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVT-AGATEALFAAILAL------ 111 (386)
T ss_pred CCHHHHHHHHHHHHcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCHHHHHHHHHHHH------
Confidence 35677788777654211 1 122223456677788888888888753 2368888 78888888887765
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+.+|| .|+++.+.|.++...++..|++++.++.+. ++.+|+++++++++ ++++++++++++||
T Consensus 112 ---------~~~gd--~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~l~~p~NP 175 (386)
T PRK09082 112 ---------VRPGD--EVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-----PRTRLIILNTPHNP 175 (386)
T ss_pred ---------cCCCC--EEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-----ccceEEEEeCCCCC
Confidence 37888 799999999999888999999999999974 57899999999997 57899999999999
Q ss_pred ccccc---CHHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEechhh
Q 038499 246 TGIYS---DTRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTKALY 316 (609)
Q Consensus 246 TG~~~---dl~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~ 316 (609)
||.+. ++++|.++|++||+++|+|++++.... ...+.... ..+..+++.|++|.+|.|+ .+|+++.++++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l- 254 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAAL- 254 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHH-
Confidence 99985 467889999999999999999753211 11222111 1234678889999998554 58999999887
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
+..+... ......+.+.+.+.+ +..++.......+.+++..++.++++.+.|.
T Consensus 255 -~~~~~~~------------------------~~~~~~~~~~~~q~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~ 307 (386)
T PRK09082 255 -SAEFRKV------------------------HQYNTFTVNTPAQLA--LADYLRAEPEHYLELPAFYQAKRDRFRAALA 307 (386)
T ss_pred -HHHHHHH------------------------HhhhcCCCChHHHHH--HHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222111 000111233333332 2222211122244556667778888888888
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC-hhhhhhcCCC
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG-PYGHHLLDLD 475 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~-p~~~~ll~i~ 475 (609)
+. ++++..+ ..+.+.+...+ .. ...+..++++.|.+++||.+.+|..|.+ +.
T Consensus 308 ~~-~~~~~~~----~g~~~~~~~~~-~~-------------~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~-------- 360 (386)
T PRK09082 308 NS-RFKLLPC----EGTYFQLVDYS-AI-------------SDLDDVEFCQWLTREHGVAAIPLSVFYADPF-------- 360 (386)
T ss_pred hC-CCcccCC----CeeEEEEEecc-cc-------------CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCC--------
Confidence 74 6666543 33554443332 10 0135678888876778999998875531 10
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
.++++||+++. ++++++..++.|+.
T Consensus 361 ------------------~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 361 ------------------PHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred ------------------CCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 24899999984 68888888887764
No 151
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=5.5e-21 Score=206.00 Aligned_cols=343 Identities=17% Similarity=0.118 Sum_probs=213.7
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCC-chhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCD-SYVGQHTTNMVHE-ASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~-~~~~~~~~~~~~e-~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
...++.|.+++...+...|+....++ ...|....+..++ +++.+++++|.+. .+++++||+.+ +..++.++
T Consensus 38 n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A-~~~~l~al---- 110 (416)
T PRK13034 38 NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQA-NGAVYLAL---- 110 (416)
T ss_pred cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHH-HHHHHHHh----
Confidence 44678888988888655554332221 2223223333333 4459999999873 45666678775 55555554
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHH--cCceE--EEEecCC-CCCCCHHHHHHHHhhhccCCCceEEE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQ--SLAEV--VEIGLDD-DGLLDIEALRSKLELYKDAKRPILGS 238 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~--~G~~v--v~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~ 238 (609)
+++|| .|++++..|.+.. ..++. .+... +.++.+. ++.+|++++++++.. .++++|+
T Consensus 111 -----------~~~GD--~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~klVi 173 (416)
T PRK13034 111 -----------LKPGD--TILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE----HKPKLII 173 (416)
T ss_pred -----------cCCCC--EEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh----cCCeEEE
Confidence 47999 7999999998732 11211 12222 3444443 567899999999864 4678887
Q ss_pred EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 239 ~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
++. ..+|...|+++|.++|++||+++++|+||+.|....+.......++|++++|+||+++||.| |+++.+++.. .
T Consensus 174 ~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~-~ 249 (416)
T PRK13034 174 AGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEI-A 249 (416)
T ss_pred ECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHH-H
Confidence 654 34688899999999999999999999999988765444332224689999999999988887 7777766542 1
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
..+.+....+ . . +.+.....+++++++......+...++++.+++++++++.|.++
T Consensus 250 ~~~~~~~~~~-~----------------------~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 250 KKINSAVFPG-L----------------------Q-GGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred HHHHhhcCCc-c----------------------c-CCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 1121111110 0 0 11111122222222221111234456788999999999999887
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhH
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~ 478 (609)
|+.+..+. ...+++.+.+.. .. .....+.+.|. +.||.+..-. .|......
T Consensus 306 -G~~~~~~~--~~t~i~~v~~~~-~~---------------~~~~~~~~~L~-~~GI~v~~~~---~p~~~~~p------ 356 (416)
T PRK13034 306 -GYDLVSGG--TDNHLLLVDLRP-KG---------------LSGKDAEQALE-RAGITVNKNT---VPGDTESP------ 356 (416)
T ss_pred -CCEeccCC--CCCcEEEEEcCC-CC---------------CCHHHHHHHHH-hCCcEEeccC---CCCCCcCC------
Confidence 88887531 234555555543 11 34566667774 4699987311 11100000
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPY----YMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~----~~t~eeid~ll~al~~v~~~ 524 (609)
. .+..+|++++. .++++|+++++++|+.++..
T Consensus 357 -------------~-~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 357 -------------F-VTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred -------------C-CCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 0 13679999887 66699999999999999874
No 152
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.89 E-value=4.5e-21 Score=206.18 Aligned_cols=340 Identities=15% Similarity=0.079 Sum_probs=213.2
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC---CCCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG---GQEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~---~~~~~vift~sGttaa 152 (609)
+.+.++.+... +.++.+.+++.+.+..... |....+..++++.+.+++.+.+|. +++++|++| +|++.+
T Consensus 30 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it-~G~~~a 102 (396)
T PRK09147 30 PPISLSIGEPKHPTPAFIKDALAANLDGLAS------YPTTAGLPALREAIAAWLERRYGLPALDPATQVLPV-NGSREA 102 (396)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHhhhhcC------CCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEEC-CChHHH
Confidence 45555544332 3456777777665432211 111112234444555555555574 443378887 899999
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcC---CCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhh
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRD---EERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLEL 227 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~---gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~ 227 (609)
+..++..+ +++ || .|+++.+.|+.+...++..|++++.||++++ +.+|+++|++++.
T Consensus 103 l~~~~~~l---------------~~~~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~- 164 (396)
T PRK09147 103 LFAFAQTV---------------IDRDGPGP--LVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW- 164 (396)
T ss_pred HHHHHHHH---------------cCCCCCCC--EEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-
Confidence 99988876 367 66 7999999999888888889999999998753 4799999998886
Q ss_pred hccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc-----cccc-CC---CCCCC--CccEEE
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY-----VEID-VR---SGQTD--GYDAIF 293 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~-----~~id-~~---~~~~~--~~D~v~ 293 (609)
++++++++++++||||.+.+ +++|+++|++|++++|+|++++... .++. +. ....+ ...+++
T Consensus 165 ----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 240 (396)
T PRK09147 165 ----ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVF 240 (396)
T ss_pred ----hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEE
Confidence 57999999999999999987 5668888999999999999976421 1111 00 01001 224788
Q ss_pred EcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 294 LSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 294 ~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
.|++|.+|.|+ .+|+++.++++ ++.+.... .....+.+.+.+. ++++.+.
T Consensus 241 ~S~SK~~~~~GlRiG~~~~~~~l--~~~~~~~~------------------------~~~~~~~~~~~q~--a~~~~~~- 291 (396)
T PRK09147 241 HSLSKRSNVPGLRSGFVAGDAAL--LKKFLLYR------------------------TYHGCAMPPAVQA--ASIAAWN- 291 (396)
T ss_pred eccccccCCccceeeeecCCHHH--HHHHHHHh------------------------hhcccCCCHHHHH--HHHHHhc-
Confidence 89999876663 59999998887 33321100 0000112222222 2122221
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhh
Q 038499 373 EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDL 452 (609)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~ 452 (609)
........+++.++.++.+.+.|++. +.+.. +..+++.|.-.+ .+...+++.|.++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~----p~~g~f~~~~~~------------------~~~~~~~~~ll~~ 347 (396)
T PRK09147 292 DEAHVRENRALYREKFDAVTPILAPV--LDVQL----PDAGFYLWAKVP------------------GDDTEFARRLYAD 347 (396)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHh--cCCCC----CCeeEEEEEECC------------------CCHHHHHHHHHHh
Confidence 22234455566666677777777653 33322 234555555443 2356677777666
Q ss_pred cCcEeccCcccCCh-hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 453 FGIQARGGCACAGP-YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 453 ~GI~v~~G~~ca~p-~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.||.+.+|..|... .+.. -..+++||+++. ++++++..+++|+.++
T Consensus 348 ~gv~v~pg~~f~~~~~~~~----------------------~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 348 YNVTVLPGSYLAREAHGVN----------------------PGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred CCEEEeCCccccccccCCC----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 79999999866421 0000 025899999973 6788888888888765
No 153
>PRK07550 hypothetical protein; Provisional
Probab=99.89 E-value=5.3e-21 Score=204.91 Aligned_cols=328 Identities=13% Similarity=0.002 Sum_probs=212.6
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.+..+.+++.+.+.. .+...|....+..++++.+.+++.+..| .+++ +|++| +|+++++..++.++
T Consensus 43 ~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~l------ 110 (386)
T PRK07550 43 PPPELLRALAEAAAD----PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPE-QVHIT-SGCNQAFWAAMVTL------ 110 (386)
T ss_pred CCHHHHHHHHHHHhC----cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEe-cCcHHHHHHHHHHh------
Confidence 356677777665431 1111121112344555555555555555 3444 89998 78888898888776
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+++|| .|+++.+.|..+...++..|++++.++.++ ++.+|+++|+++++ .+++++++++++|
T Consensus 111 ---------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-----~~~~~v~~~~P~N 174 (386)
T PRK07550 111 ---------AGAGD--EVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-----PRTRAIALVTPNN 174 (386)
T ss_pred ---------cCCCC--EEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-----ccCcEEEEeCCCC
Confidence 37898 699999999888888889999999999974 34679999999998 5788888999999
Q ss_pred ccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechh
Q 038499 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKAL 315 (609)
Q Consensus 245 ~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~ 315 (609)
|||.+.+ +++|+++|++||+++|+|++++.... +...... ....-.+++.|++|.+|.| .++|++++++++
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~ 254 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPAR 254 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHH
Confidence 9999987 67899999999999999999753211 1111100 0012246788999999844 358999998877
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+..+.... .....+.+.+.+.+ ..++.- + ....+..+++.++.++++.+.
T Consensus 255 --~~~~~~~~------------------------~~~~~~~s~~~q~~~~~~l~~-~--~~~~~~~~~~~~~~~~~l~~~ 305 (386)
T PRK07550 255 --IAEIEKFM------------------------DTVAICAPRIGQIAVAWGLPN-L--ADWRAGNRAEIARRRDAFRAV 305 (386)
T ss_pred --HHHHHHHH------------------------hhcccCCCcHHHHHHHHHhcc-H--HHHHHHHHHHHHHHHHHHHHH
Confidence 22221110 00111222333322 111110 0 112344556667778888888
Q ss_pred hCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 395 LLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
|..++++.+. + ..+++.|...+ .. ..+..++++.|.+++||.+++|..+...
T Consensus 306 L~~~~~~~~~-~----~g~~~~~~~~~-~~--------------~~~~~~l~~~l~~~~gv~v~pg~~f~~~-------- 357 (386)
T PRK07550 306 FARLPGWELL-A----SGAYFAYVRHP-FP--------------DRPSREVARRLAKEAGILCLPGTMFGPG-------- 357 (386)
T ss_pred HHhCCCceeC-C----CceEEEEecCC-CC--------------CCCHHHHHHHHHHhcCEEEeCchhhCCC--------
Confidence 8876666543 2 23455554443 10 1457788888766689999988765310
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
..+++||+++. .++++++.+++.|.+.
T Consensus 358 -------------------~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 358 -------------------QEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred -------------------CCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 14799999974 4689999999988764
No 154
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.6e-21 Score=207.20 Aligned_cols=310 Identities=15% Similarity=0.112 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR- 199 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~- 199 (609)
.....+++.++++.|+ ++++++ +|+++++..++..+ +++|| +|+++...|.+....+.
T Consensus 53 pt~~~Le~~lA~leg~---e~ivvt-~gg~~Ai~~~l~al---------------l~~Gd--~Il~~~~~y~~~~~~~~~ 111 (388)
T PRK08861 53 PNRGLLEQTLSELESG---KGAVVT-NCGTSALNLWVSAL---------------LGPDD--LIVAPHDCYGGTYRLFNT 111 (388)
T ss_pred chHHHHHHHHHHHhCC---CeEEEE-CCHHHHHHHHHHHH---------------cCCCC--EEEEcCCchHHHHHHHHH
Confidence 3467789999999996 278887 67777888888766 47899 68998888887665442
Q ss_pred ---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 200 ---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 200 ---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
..|++++.++. .|+++++++++ ++|++|++++|+||||.+.|+++|+++||++|+++++|++++.|.
T Consensus 112 ~~~~~gi~v~~vd~-----~d~e~l~~~i~-----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~ 181 (388)
T PRK08861 112 RANKGDFKVQFVDQ-----SDAAALDAALA-----KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPV 181 (388)
T ss_pred HHhcCCeEEEEECC-----CCHHHHHHhcC-----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc
Confidence 24678888753 48999999997 689999999999999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
...++. .++|+++.|.|||++|+.+ .|+++.+++.. .+.+.. .+...
T Consensus 182 ~~~pl~----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~-~~~~~~--------------------------~~~~~ 230 (388)
T PRK08861 182 LQKPLE----LGADFVIHSTTKYINGHSDVIGGVLITKTKEH-AEELAW--------------------------WGNCI 230 (388)
T ss_pred cCCCcc----cCCCEEEeecceeccCCCcceeEEEEecHHHH-HHHHHH--------------------------HHhcc
Confidence 443332 2789999999999999875 57777754331 111110 01111
Q ss_pred CC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEe
Q 038499 355 GT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNI 419 (609)
Q Consensus 355 gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~ 419 (609)
|. .+... +.+ .+....-+....++..+.+..+.+.|+.+|.+. |+-|. + ....++++|.+
T Consensus 231 G~~~~p~~---a~l--~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~ 305 (388)
T PRK08861 231 GATGTPFD---SYM--TLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEF 305 (388)
T ss_pred CCCCChHH---HHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEe
Confidence 21 11111 111 111122344555677778889999999998874 54442 1 12456888887
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.. +. -....+++.| +.+.+.+.-|...+ .|.......+.++... ..|+.++
T Consensus 306 ~~-~~---------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~~ 359 (388)
T PRK08861 306 AG-SF---------------EQLKVFVKAL-ALFSLAESLGGVESLICHPASMTHRAMGEEALA---------EAGVSQQ 359 (388)
T ss_pred CC-CH---------------HHHHHHHhcC-CcceEccCCCCCcceeeCCCcccccccCHHHHH---------hcCCCCC
Confidence 64 21 1133455555 45566666554222 1221111122221111 2466789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.||||++.-.-++=++.+.++|+.+.+
T Consensus 360 liRlsvGlE~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 360 LLRLSVGLEDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred eEEEEeCcCCHHHHHHHHHHHHHHHHh
Confidence 999999976555555566666655443
No 155
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.89 E-value=1.2e-20 Score=214.59 Aligned_cols=354 Identities=16% Similarity=0.122 Sum_probs=230.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
...+..+++.++.+++++++|.+. .-++.++|+.+-+..++.+... .+ .-..+.|.+|+++...|+++
T Consensus 524 ~sqG~lq~i~elq~~l~eltGmd~--~Sl~p~aGA~gE~agL~aiR~y------~~----~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 524 QVEGYQELIAQLEKWLCSITGFDA--ISLQPNSGAQGEYAGLRVIRSY------HE----SRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred HhHHHHHHHHHHHHHHHHHHCCCC--cccCCchHHHHHHHHHHHHHHH------HH----hcCCCCCCEEEEEccccCcC
Confidence 345678999999999999999983 3466666666533333222110 00 00123456899999999999
Q ss_pred HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC-HHHHHHHHHHhCCeEEEecccc
Q 038499 195 LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d-l~~I~~la~~~g~~vivD~A~~ 273 (609)
...++..|++++.|+.+++|.+|+++|+++++++ .+++++|++++++| +|.+.| +++|+++||++|+++++|+|+.
T Consensus 592 Pasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~--~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~ 668 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQH--GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANM 668 (939)
T ss_pred HHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhc--CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecCh
Confidence 9899999999999999999999999999999741 24789999999999 799977 9999999999999999999987
Q ss_pred CCccccc-CCCCCCCCccEEEEcCCCCCCCC-----CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 274 GPYVEID-VRSGQTDGYDAIFLSTHKFLGGP-----GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 274 ~~~~~id-~~~~~~~~~D~v~~S~hK~lggp-----~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
.+...+. ... .++|++++|.||+|++| .|+|++.+++.+ .|..+|+....... ..... .
T Consensus 669 ~al~~l~~Pg~---~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L------~~~lPg~~v~~t~d---~~gre--q- 733 (939)
T TIGR00461 669 NAQVGLTSPGD---LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHL------IPFLPKHDVVSMIT---GIGGS--K- 733 (939)
T ss_pred hhCCCCCCccc---cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhc------hhhcCCCccccccc---CCCCc--c-
Confidence 6544433 233 38999999999998844 446999999876 23334432211100 00000 0
Q ss_pred ccccccC--CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC-CCCcceEEEEeccCCC
Q 038499 348 IEERESG--GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTS-TKRQAILSFNIHSSTI 424 (609)
Q Consensus 348 ~~~r~~~--gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~-~~r~~~~~f~~~~~~~ 424 (609)
..+... .+.+..-++++.+-+.+....|+.++.+....+++|+.++|++ +++++.+.. .....-|.+...+ ..
T Consensus 734 -~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~-~~ 809 (939)
T TIGR00461 734 -SIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRP-LK 809 (939)
T ss_pred -ccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccc-hh
Confidence 001111 1112112222222222223456667777888899999999987 445554421 1112224444432 11
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY 504 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~ 504 (609)
........++++.|.| +|+..-. ..+ | -++.+=|.+.-
T Consensus 810 -----------~~~g~~~~dIakrL~d-~G~hapt-~~~--p---------------------------v~g~lmiepTE 847 (939)
T TIGR00461 810 -----------AKTGIEAIDVAKRLQD-YGFHAPT-LSF--P---------------------------VPGTLMVEPTE 847 (939)
T ss_pred -----------hhcCCCHHHHHHHHHh-CCeeccc-cCC--c---------------------------cCCeEEEEeec
Confidence 1223578899999987 6997542 111 1 02444444445
Q ss_pred CCCHHHHHHHHHHHHHHHHhccc--------------ccCCCcccccCCceeec
Q 038499 505 YMSNEEFEFTLEALEFIAIYGQR--------------FLPLYNFNIKTGTWCFM 544 (609)
Q Consensus 505 ~~t~eeid~ll~al~~v~~~~~~--------------~~p~y~~~~~~~~w~~~ 544 (609)
-.|++|+|++++++..+.++... ..|...-+...++|.|.
T Consensus 848 ~eskeelD~f~~al~~I~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~ 901 (939)
T TIGR00461 848 SESLEELDRFCDAMIAIKEEINALVAGQPKGQDNPLKNAPHSLQSLITSEWWHP 901 (939)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHhhCCCCHHHhhcCCCCCC
Confidence 68999999999999988766542 44666666666678776
No 156
>PRK09148 aminotransferase; Validated
Probab=99.89 E-value=8.2e-21 Score=204.58 Aligned_cols=346 Identities=11% Similarity=0.085 Sum_probs=215.0
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~ 154 (609)
.+.|+.+... +.++.+.+++.+.+.. +....|....+..++++.+.+++.+..|. +++++|++| +|++.+|.
T Consensus 32 ~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it-~G~~~al~ 106 (405)
T PRK09148 32 IIDLGMGNPDLPTPQHIVDKLCETAQD----PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVAT-LGSKEGFA 106 (405)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHcC----cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-CChHHHHH
Confidence 4555544332 2356667777665431 11111211112233444444444443354 343368888 89999999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++..+ +++|| .|+++.+.|+.+...++..|++++.++++.++. +++++++++... .+++
T Consensus 107 ~~~~~l---------------~~~gd--~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~--~~~~ 166 (405)
T PRK09148 107 NMAQAI---------------TAPGD--VILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHS--IPKP 166 (405)
T ss_pred HHHHHh---------------cCCCC--EEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhc--cccc
Confidence 998877 37888 699999999999888899999999999876442 345555555421 1578
Q ss_pred eEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCCC-C
Q 038499 235 ILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGPG-S 305 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp~-g 305 (609)
+++++++|+||||.+.+. ++|+++|++||+++|+|+++.... ....+.... ..+..+++.|++|.+|.|+ .
T Consensus 167 ~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR 246 (405)
T PRK09148 167 IALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWR 246 (405)
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchh
Confidence 999999999999999996 568899999999999999975321 111121111 0123456789999998553 5
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQE 384 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~ 384 (609)
+|+++.++++ ++.+... ......+.+.+.+.+. ..+ +.+ ....+.++++.
T Consensus 247 ~G~~v~~~~~--i~~l~~~------------------------~~~~~~~~~~~~q~~~--~~~-L~~~~~~~~~~~~~~ 297 (405)
T PRK09148 247 MGFAVGNERL--IAALTRV------------------------KSYLDYGAFTPIQVAA--TAA-LNGPQDCIAEMRELY 297 (405)
T ss_pred eeeeeCCHHH--HHHHHHH------------------------HHHhccCCChHHHHHH--HHH-HhCcHHHHHHHHHHH
Confidence 9999998887 3333111 0001112223333221 222 221 12345566677
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
++.++++.+.|+++ ++.+..+ ..+++.|.-.+ ... ...+..++++.|.++.||.+++|..|.
T Consensus 298 ~~~r~~l~~~L~~~-~~~~~~p----~~g~f~~~~l~-~~~------------~~~~~~~~~~~ll~~~gV~v~pg~~f~ 359 (405)
T PRK09148 298 KKRRDVLVESFGRA-GWDIPPP----AASMFAWAPIP-EAF------------RHLGSLEFSKLLVEKADVAVAPGVGFG 359 (405)
T ss_pred HHHHHHHHHHHHHc-CCccCCC----CeeEEEEEECC-Ccc------------CCCCHHHHHHHHHHhCCEEEeCchhhC
Confidence 77888888888875 5554433 34556555544 210 002346777777666799999887653
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.. .++|+||++. .+.+++...++.|..++..
T Consensus 360 ~~---------------------------~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 360 EH---------------------------GDGYVRIALV--ENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred CC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 11 1489999997 5788888888888777654
No 157
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.89 E-value=1.7e-21 Score=206.86 Aligned_cols=298 Identities=24% Similarity=0.192 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHhC------CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 123 VHEASNYIKKCLG------GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 123 ~~e~r~~ia~~~g------~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
..++|+.++++++ .+++.+|+++ +|+.+++..+...+. .++|+ .|+++.+.|+.+..
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~i~~~-~G~~~~~~~~~~~~~--------------~~~~~--~vlv~~P~y~~~~~ 108 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPEANILVT-SGAQAALFLLLRLLK--------------INPGD--TVLVPDPCYPSYIE 108 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGGEGEEEE-SHHHHHHHHHHHHHH--------------SSTTS--EEEEEESSSTHHHH
T ss_pred hHHHHHHHHHHhhhccCcccccceEEEEe-cccccchhhhhhccc--------------ccccc--cceecCCccccccc
Confidence 5677888888888 4443367776 899999988887762 25777 69999999999999
Q ss_pred HHHHcCceEEEEecC--CCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHH---HHHHHHHhCCeEEEec
Q 038499 197 SWRQSLAEVVEIGLD--DDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRS---IARLLHQYGGFACFDF 270 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~---I~~la~~~g~~vivD~ 270 (609)
.++..|++++.++++ .++.+|+++|++.+++..... +++++++++++||||...+.++ |+++|++||+++++|+
T Consensus 109 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De 188 (363)
T PF00155_consen 109 AARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDE 188 (363)
T ss_dssp HHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEE
T ss_pred cccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeee
Confidence 999999999999965 577899999999998533222 5789999999999999988665 5555999999999999
Q ss_pred cccCCccc-ccC----CCCCCCCc-cEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 271 AASGPYVE-IDV----RSGQTDGY-DAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 271 A~~~~~~~-id~----~~~~~~~~-D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+++..... .+. ... ..+. .+++.|++|.+|.|+ .+|++++++++ ++.+...
T Consensus 189 ~y~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~--~~~l~~~------------------- 246 (363)
T PF00155_consen 189 AYSDLIFGDPDFGPIRSLL-DEDDNVIVVGSLSKSFGLPGLRVGYIVAPPEL--IERLRRF------------------- 246 (363)
T ss_dssp TTTTGBSSSSHTHHHHGHH-TTTSTEEEEEESTTTTTSGGGTEEEEEEEHHH--HHHHHHH-------------------
T ss_pred ceeccccCCCccCcccccc-cccccceeeeeccccccccccccccccchhhh--hhhhhhc-------------------
Confidence 97753322 111 101 1122 478889999998664 58999998877 2222110
Q ss_pred ccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccC
Q 038499 344 YLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
.... .. +...+.+ ...+.-........+.+.++.++.++++.+.|.+. ++.+..+ ..+++.+...+
T Consensus 247 -----~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~----~~~~~~~~~~~- 313 (363)
T PF00155_consen 247 -----QRSG-LS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPP----EAGFFLWVRLD- 313 (363)
T ss_dssp -----HHHT-TS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHH----SBSSEEEEEES-
T ss_pred -----cccc-cc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeec----cCccEEEEEcc-
Confidence 0111 11 2222221 11111110000145677788888899999999877 8888865 35777777665
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
. .+..++.+.|.++.||.+.+|..+.. ++++|+++
T Consensus 314 ~----------------~~~~~l~~~L~~~~gi~v~pg~~~~~-----------------------------~~~iRi~~ 348 (363)
T PF00155_consen 314 P----------------NDAEELAQELLEEYGILVRPGSYFGV-----------------------------PGYIRISL 348 (363)
T ss_dssp H----------------HHHHHHHHHHHHHHTEEEEEGGGGTS-----------------------------TTEEEEEG
T ss_pred c----------------chHHHHHHHHHHhCCEEEEecCCCCC-----------------------------CCEEEEEe
Confidence 1 13568888888877999998765541 48999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 038499 503 PYYMSNEEFEFTLEAL 518 (609)
Q Consensus 503 ~~~~t~eeid~ll~al 518 (609)
...+++++++++++|
T Consensus 349 -a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 349 -ASHSEEDLEEALERL 363 (363)
T ss_dssp -GCSCHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHhhC
Confidence 567999999999886
No 158
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.89 E-value=2.9e-21 Score=210.25 Aligned_cols=308 Identities=17% Similarity=0.131 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 118 HTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 118 ~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
+...+++.+.++++...|. +++ +|++| +|++.++.++++++ ++||| .|++..+.|+...
T Consensus 133 G~~~LR~~ia~~l~~~~g~~~~~~-~IiiT-~G~q~al~l~~~~l---------------~~pGd--~v~vE~PtY~~~~ 193 (459)
T COG1167 133 GLPELREAIAAYLLARRGISCEPE-QIVIT-SGAQQALDLLLRLL---------------LDPGD--TVLVEDPTYPGAL 193 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCccCcC-eEEEe-CCHHHHHHHHHHHh---------------CCCCC--EEEEcCCCcHHHH
Confidence 3445555555555544454 455 89999 89999999999987 48999 7999999999999
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce-EEEEecccCccccccCHH---HHHHHHHHhCCeEEEecc
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI-LGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFA 271 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~-lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A 271 (609)
..++..|++++.||+|++| +|+++|++++.+ .++| ++++++.+||||..++.+ +|.++|++||+++|.|..
T Consensus 194 ~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~----~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~ 268 (459)
T COG1167 194 QALEALGARVIPVPVDEDG-IDPEALEEALAQ----WKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDY 268 (459)
T ss_pred HHHHHcCCcEEecCCCCCC-CCHHHHHHHHhh----cCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCc
Confidence 9999999999999999776 899999999986 4677 666788999999999975 599999999999999998
Q ss_pred ccCC----cccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 272 ASGP----YVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 272 ~~~~----~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
++.- ..+.++..+...+-.+++.|++|.+....++||+++++++ ++.+...
T Consensus 269 y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~--~~~~~~~----------------------- 323 (459)
T COG1167 269 YGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPEL--IEKLLRL----------------------- 323 (459)
T ss_pred chhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHH--HHHHHHH-----------------------
Confidence 6531 1111233333346679999999999844679999999887 2222110
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhCCC-C-ceEEeCCCCCCCcceEEEEeccC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEY---IGHEVIKKQEETYIERALERLLPN-Q-NIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~---~g~~~i~~~~~~l~~~~~~~L~~~-p-~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
......+++.+.+.+.+ .++ .+. .....++...++.++.+.+.|.+. + .+.+..+ ..+++.+...+
T Consensus 324 -k~~~~~~~s~~~Q~~la--~~l-~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p----~gG~flwl~l~- 394 (459)
T COG1167 324 -KQAADLGPSSLSQAALA--AFL-LSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRP----EGGLFLWLELP- 394 (459)
T ss_pred -HHHhcCCCChHHHHHHH--HHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC----CceEEEEEEcC-
Confidence 12223345555543222 233 221 123466667777788888888765 3 4555544 44666666665
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEe
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls 501 (609)
.. .+...+...+.+ .|+.+.+ |..|..... ..+++|++
T Consensus 395 ~~---------------~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~-------------------------~~~~~Rl~ 433 (459)
T COG1167 395 EG---------------IDARELLAAALE-KGVVVTPLGSAFSADGD-------------------------PRNGLRLS 433 (459)
T ss_pred CC---------------CCHHHHHHHHHH-CCCEEEcCCccccCCCC-------------------------CCCeEEEE
Confidence 21 466777777765 5999998 776652110 13699999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 502 FPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 502 ~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+++ .++++++..++.|..++...
T Consensus 434 ~s~-~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 434 FSS-PSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred cCC-CCHHHHHHHHHHHHHHHHHH
Confidence 985 46899999999888887653
No 159
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2e-20 Score=200.97 Aligned_cols=325 Identities=14% Similarity=0.088 Sum_probs=210.6
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------CCCCCcEEEeCChHHHHHHHHHHHhc
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------GGQEDAMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------~~~~~~vift~sGttaal~~l~~~l~ 161 (609)
+.++.+.+++.+.+.....+.+. +.. .....++|+.++++++ ++++ +|++| +|++.+++.++..+
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~~~--y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t-~G~~~al~~~~~~l- 116 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGLHG--YMP----NAGYPEVREAIAESLNRRFGTPLTAD-HIVMT-CGAAGALNVALKAI- 116 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCccc--CCC----CCCCHHHHHHHHHHHHHHhCCCCCcC-cEEEe-CChHHHHHHHHHHh-
Confidence 45677888877665432111111 111 1224456666666654 3555 89998 78888999888776
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEe
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFS 240 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s 240 (609)
+++|| .|+++.+.|..+...++..|++++.++.+++ +.+|+++|+++++ +++++++++
T Consensus 117 --------------~~~gd--~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-----~~~~~v~~~ 175 (394)
T PRK06836 117 --------------LNPGD--EVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-----PKTKAVIIN 175 (394)
T ss_pred --------------cCCCC--EEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-----cCceEEEEe
Confidence 37888 6889999998888778889999999999875 6899999999997 689999999
Q ss_pred cccCccccccC---HHHHHHHHHH------hCCeEEEeccccCCcccc-cCCC-CCCCCccEEEEcCCCCCCCCC-CcEE
Q 038499 241 ACSNVTGIYSD---TRSIARLLHQ------YGGFACFDFAASGPYVEI-DVRS-GQTDGYDAIFLSTHKFLGGPG-SPGI 308 (609)
Q Consensus 241 ~~sn~TG~~~d---l~~I~~la~~------~g~~vivD~A~~~~~~~i-d~~~-~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (609)
+++||||.+.| +++|+++|++ ||+++++|+++..-...- .... .......+++.|++|.+|.|+ ++|+
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~ 255 (394)
T PRK06836 176 SPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGY 255 (394)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEE
Confidence 99999999988 4567778898 899999999965321100 0000 001133688889999998554 6999
Q ss_pred EEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc--CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES--GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~--~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
+++++.......+...... ..+.. ..++.+.+. ++...+.+ +. ...+.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~q~---~~~~~l~~--~~--~~~~~~~ 307 (394)
T PRK06836 256 IAVNPEMEDADDLVAALVF---------------------ANRILGFVNAPALMQR---VVAKCLDA--TV--DVSIYKR 307 (394)
T ss_pred EecCHHHhhhHHHHHHHHH---------------------HhhccccccCCHHHHH---HHHHHhCC--hH--HHHHHHH
Confidence 9998765110000000000 00000 122333332 22222212 11 2334455
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
.++.+.+.|+++ ++++..+ ..+++.|...+ . .+..++++.|. ++||.+++|..|.
T Consensus 308 ~r~~l~~~L~~~-g~~~~~~----~gg~~~~~~~~-~----------------~~~~~~~~~l~-~~gv~v~~g~~f~-- 362 (394)
T PRK06836 308 NRDLLYDGLTEL-GFECVKP----QGAFYLFPKSP-E----------------EDDVAFCEKAK-KHNLLLVPGSGFG-- 362 (394)
T ss_pred HHHHHHHHHHhC-CCEeecC----CceEEEEEeCC-C----------------CCHHHHHHHHH-hCCEEEECchhcC--
Confidence 677778888776 6776544 33555555444 1 24567777775 4699999886553
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||+++ .++++++..++.|+++++.
T Consensus 363 ---------------------------~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 363 ---------------------------CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred ---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1479999997 4899999999999988753
No 160
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1e-20 Score=203.73 Aligned_cols=336 Identities=12% Similarity=0.065 Sum_probs=213.7
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.|..+.+++.+.+... .. . .|....+...+++.+.+++.+..|. +++++|++| +|+++++..++.++.
T Consensus 47 ~~~~~~~~~~~~~~~~--~~-~-~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it-~G~~~al~~~~~~l~----- 116 (403)
T PRK08636 47 TPQHIIDKLCESAQKP--KT-H-GYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVAT-MGSKEGYVHLVQAIT----- 116 (403)
T ss_pred CCHHHHHHHHHHhcCC--cc-C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEC-CChHHHHHHHHHHhC-----
Confidence 4555666666655321 01 1 1111122334455555555555564 343369998 899999999988873
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CCCCCCHHHH----HHHHhhhccCCCceEEEEe
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DDGLLDIEAL----RSKLELYKDAKRPILGSFS 240 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~g~ld~e~L----~~al~~~~~~~~~~lv~~s 240 (609)
++|| .|++..+.|+.+...++..|++++.|+++ .++.+|+++| ++++++. ..++++++++
T Consensus 117 ----------~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~--~~~~~~i~~~ 182 (403)
T PRK08636 117 ----------NPGD--VAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRES--SPKPKYVVVN 182 (403)
T ss_pred ----------CCCC--EEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhc--cCCceEEEEe
Confidence 7898 79999999999988899999999999885 3457898765 4444421 1478899999
Q ss_pred cccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC-CCccEEEEcCCCCCCCCC-CcEEEEE
Q 038499 241 ACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT-DGYDAIFLSTHKFLGGPG-SPGILLM 311 (609)
Q Consensus 241 ~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~-~~~D~v~~S~hK~lggp~-g~G~L~~ 311 (609)
+|+||||.+.+. ++|+++|++|++++|+|++++... ....+..+.. .+..+++.|++|.+|.|+ .+|+++.
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~ 262 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG 262 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeC
Confidence 999999999885 568889999999999999965321 1112222211 123355679999997553 5999999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKKQEETYIER 390 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~ 390 (609)
++++ +..+... ......+++.+.+.+.. ..+.. ....+.+++..++.++.
T Consensus 263 ~~~l--i~~~~~~------------------------~~~~~~~~~~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 313 (403)
T PRK08636 263 NKKL--VGALKKI------------------------KSWLDYGMFTPIQVAAT---IALDGDQSCVEEIRETYRKRRDV 313 (403)
T ss_pred CHHH--HHHHHHH------------------------HHHhcccCChHHHHHHH---HHHhCcHHHHHHHHHHHHHHHHH
Confidence 8887 3322111 00011233333333221 11111 12244566667777788
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|+.. ++.+..+ ..+.+.|.-.+ +.. ...+..+++..|.++.||.+.+|..|...
T Consensus 314 l~~~L~~~-~~~~~~p----~~g~~~~~~l~-~~~------------~~~~~~~l~~~ll~~~gV~v~pg~~f~~~---- 371 (403)
T PRK08636 314 LIESFANA-GWELQKP----RASMFVWAKIP-EPA------------RHLGSLEFSKQLLTEAKVAVSPGIGFGEY---- 371 (403)
T ss_pred HHHHHHHC-CCcccCC----CcceEEEEECC-Ccc------------CCCCHHHHHHHHHHhCCEEEecchhhCcC----
Confidence 88888776 5655443 33555555444 210 01235677766656679999988765311
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||+++ .++++++..++.|+.+++.
T Consensus 372 -----------------------~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 372 -----------------------GDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -----------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 1479999997 5889999999999888754
No 161
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=1.1e-20 Score=197.64 Aligned_cols=335 Identities=19% Similarity=0.183 Sum_probs=235.6
Q ss_pred eEEecCCCCCCC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASGRS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+..|...|.. .+.+.+++.+.+..+..... .+..-.++.....++++.||+++|.+. .++|+ ||-.+++..+
T Consensus 42 ~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~-SGy~AN~~~i 116 (388)
T COG0156 42 LNFCSNDYLGLASHPELIEAAKAAIRRYGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFS-SGFVANLGLL 116 (388)
T ss_pred EeeeccCcccccCCHHHHHHHHHHHHHhCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEc-ccchhHHHHH
Confidence 334433333432 23477777777766422111 123334567889999999999999973 68886 8999877766
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC-Cce
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK-RPI 235 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~ 235 (609)
.... +++| .|+.....|.|.....+..+++++....+ |+++|++.|.+....+ +.+
T Consensus 117 ~~l~----------------~~~d--li~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 117 SALL----------------KKGD--LIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRK 173 (388)
T ss_pred HHhc----------------CCCc--EEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCce
Confidence 5443 5677 89999999999999999999999999864 8999999998643222 468
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCC------CCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSG------QTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~------~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
+|++..+.++.|.+.|+++|++++++||++++||+||+.|....+-... ....+|+++.++.|.||+-+ |++
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G--g~v 251 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG--GYI 251 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC--cee
Confidence 9999999999999999999999999999999999999987654321111 11346899999999999443 788
Q ss_pred EEechhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCCh-hHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 310 LMTKALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQMIRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 310 ~~~~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
..+..+.. ....+|. -+..+.| ...+...+++... + .....+++.++
T Consensus 252 ~g~~~~~d~L~~~ar~~--------------------------ifStalpP~~aaa~~~al~~l--~--~~~~~r~~L~~ 301 (388)
T COG0156 252 AGSAALIDYLRNRARPF--------------------------IFSTALPPAVAAAALAALRIL--E--EGPERRERLQE 301 (388)
T ss_pred eCcHHHHHHHHHhCCce--------------------------eccCCCCHHHHHHHHHHHHHH--H--hCHHHHHHHHH
Confidence 88877622 1111221 1112223 3333444555543 2 23456677778
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+..++++.++.. ++.+... ..+|+.+.+.+ .. ....+...|.++ ||.+.+-...+.|
T Consensus 302 ~~~~~~~~~~~~-~~~~~~s----~s~I~pv~~gd-~~----------------~a~~~s~~l~~~-Gi~v~~i~~PTVp 358 (388)
T COG0156 302 LAAFFRSLLKAL-GLVLLPS----ESPIIPVILGD-EE----------------RALEASRALLEE-GIYVSAIRPPTVP 358 (388)
T ss_pred HHHHHHHHHHhc-CCccCCC----CCCeeeeEeCC-HH----------------HHHHHHHHHHHC-CeeEeeecCCCCC
Confidence 888888666554 5544332 45788777776 22 366788888776 9999977665555
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.+ ...+|++++..+|++||+++++++.++
T Consensus 359 ~g--------------------------tarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 359 KG--------------------------TARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CC--------------------------cceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 32 367999999999999999999999875
No 162
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=1.3e-20 Score=195.47 Aligned_cols=331 Identities=15% Similarity=0.082 Sum_probs=221.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
...++++.+++++|+.. .+.++|||. |+.+.+.+++ +.||| +||+++.++.+...+....
T Consensus 35 ~v~~FE~~~ae~~G~k~---ava~~sgT~-AL~laL~al~--------------ig~GD--eVI~ps~TfvATan~i~~~ 94 (374)
T COG0399 35 FVRRFEQAFAEYLGVKY---AVAVSSGTA-ALHLALLALA--------------IGPGD--EVIVPSFTFVATANAVLLV 94 (374)
T ss_pred HHHHHHHHHHHHhCCCe---EEEecChHH-HHHHHHHhcC--------------CCCCC--EEEecCCchHHHHHHHHHc
Confidence 46778899999999973 455546666 6888888776 58999 7999999999999999999
Q ss_pred CceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc
Q 038499 202 LAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 202 G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
|+++++|++|+ ++.+|++.|+++|+ ++||.|+..| .-|...|+++|.++|++||+++|.|+||+.|...-+
T Consensus 95 Ga~PVFvDid~~T~nid~~~ie~aIt-----~~tKAIipVh---l~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~g 166 (374)
T COG0399 95 GAKPVFVDIDPDTLNIDPDLIEAAIT-----PRTKAIIPVH---LAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKG 166 (374)
T ss_pred CCeEEEEecCCcccCCCHHHHHHHcc-----cCCeEEEEeh---hccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecC
Confidence 99999999997 58999999999999 6899887766 569999999999999999999999999999876554
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI 360 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~ 360 (609)
-+.+....+-+++|-++|.++...| |+++.+++-. .++++....-|-... ....|.. .+.|...=+
T Consensus 167 k~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~el-a~k~~~lr~hG~~~~-------~~~~y~~-----~~~G~N~rm 232 (374)
T COG0399 167 KKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEEL-AEKARSLRNHGLSRD-------AVFKYLH-----EELGYNYRL 232 (374)
T ss_pred cccccccceEEEEecCCCCccccCc-eEEEeCCHHH-HHHHHHHHHhCcCCC-------cccccee-----eecccccCH
Confidence 4433233344455556699986654 8888887652 112211111111100 0011111 112332112
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 361 QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
.-+.|++-+. +....+.+.++.+++++++.+.|++++++.+.......+.++..+.+.- . .+ ..
T Consensus 233 ~~iqAAigl~--QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~-~------------~~-~~ 296 (374)
T COG0399 233 TEIQAAIGLA--QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILV-D------------EE-GI 296 (374)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEe-c------------CC-CC
Confidence 2223333222 2334677888888999999999999988666544333333333333332 1 11 35
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCC----h-hhhhhcC--CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAG----P-YGHHLLD--LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~----p-~~~~ll~--i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
+.+.+.+.|++. ||.. +..+.+ | |.+.... ...+.++.+ ....+++.++..++++|+++
T Consensus 297 ~R~~l~~~L~~~-gi~~--~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~-----------~~r~l~LP~~p~l~~~~~~~ 362 (374)
T COG0399 297 SRDALMESLKEA-GVGA--VVYFRPLHLQPAYRQLGYFPEGDLPNAEDL-----------SERILSLPLHPNLSEEDVDR 362 (374)
T ss_pred CHHHHHHHHHhC-CCCc--eEEeeccccchhhhcccccccCCCchHHHH-----------hhCeEEccCCCCCCHHHHHH
Confidence 778999999775 8882 222221 1 1111000 122333333 25789999999999999999
Q ss_pred HHHHHHHHHHh
Q 038499 514 TLEALEFIAIY 524 (609)
Q Consensus 514 ll~al~~v~~~ 524 (609)
++++|+++...
T Consensus 363 V~~~l~~~~~~ 373 (374)
T COG0399 363 VIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHhcc
Confidence 99999998753
No 163
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.4e-20 Score=200.83 Aligned_cols=331 Identities=14% Similarity=-0.011 Sum_probs=209.2
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--------CCCCCcEEEeCC
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--------GGQEDAMIFCGS 147 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--------~~~~~~vift~s 147 (609)
.++.++.+... +.|+.+.+++.+.+.... +.. .| .. ....++|+.|+++++ .+++ +|++| +
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~Y-~~----~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I~it-~ 98 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGI-ESN--RY-PD----GGHEALKQAIAEYVNESAAGSSQITPA-NISVG-N 98 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcc-ccc--CC-CC----CchHHHHHHHHHHhCccccccCCCCHH-HEEEc-C
Confidence 35666655554 456778888877554310 000 11 11 114567788888877 5665 89988 8
Q ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHh
Q 038499 148 GTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLE 226 (609)
Q Consensus 148 Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~ 226 (609)
|+++++..++.++. .+||. .|++..+.|+.+...++..|++++.++.++ ++.+|+++|+++++
T Consensus 99 Ga~~al~~~~~~~~---------------~~g~~-~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~ 162 (374)
T PRK02610 99 GSDELIRSLLIATC---------------LGGEG-SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIE 162 (374)
T ss_pred ChHHHHHHHHHHHc---------------CCCCC-eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHH
Confidence 99999987665542 45643 589999999999989999999999999876 46899999999986
Q ss_pred hhccCCCceEEEEecccCccccccCHHHHHHHHHH-hCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCC-
Q 038499 227 LYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG- 304 (609)
Q Consensus 227 ~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~-~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~- 304 (609)
+.. ..+++++++++++||||.+.+.+++.++++- +++++|+|+++..-.....+.......--+++.|++|.+|.|+
T Consensus 163 ~~~-~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~Gl 241 (374)
T PRK02610 163 QTQ-NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAH 241 (374)
T ss_pred hhc-CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCccc
Confidence 310 1378999999999999999998776665532 4899999999753211111111111112367789999997664
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh-cCHHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY-IGHEVIKKQ 383 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~-~g~~~i~~~ 383 (609)
.+|+++.++++ ++.+.... ...+.+.+.+.+ +... +.+. ...+.++..
T Consensus 242 RiG~~v~~~~l--~~~l~~~~--------------------------~~~~~~~~~q~a--~~~~-l~~~~~~~~~~~~~ 290 (374)
T PRK02610 242 RVGYAIGHPEL--IAVLEKVR--------------------------LPYNLPSFSQLA--AQLA-LEHRQELLAAIPEI 290 (374)
T ss_pred ceeeeecCHHH--HHHHHHhc--------------------------CCCCCCHHHHHH--HHHH-hcCHHHHHHHHHHH
Confidence 59999998877 33321110 001222333322 1111 1111 112233333
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.+.++.+.+.|+.++++.+. + ..+++.|...+ .. .+..++++.|. +.||.++.+
T Consensus 291 -~~~r~~l~~~L~~~~~~~~~-p----~~g~f~~~~l~-~~---------------~~~~~~~~~l~-~~gi~v~~~--- 344 (374)
T PRK02610 291 -LQERDRLYQALQELPQLRVW-P----SAANFLYLRLS-QD---------------AALAALHQALK-AQGTLVRHT--- 344 (374)
T ss_pred -HHHHHHHHHHHHhCCCcEeC-C----CcceEEEEeCC-CC---------------CCHHHHHHHHH-HCCEEEEeC---
Confidence 33366677888777777654 3 22344444333 11 35678888885 469998721
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++++||+++ +.++++.++++|+++++..
T Consensus 345 -------------------------------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 345 -------------------------------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred -------------------------------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 378999997 5688999999998887643
No 164
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.89 E-value=7.4e-21 Score=220.10 Aligned_cols=309 Identities=16% Similarity=0.117 Sum_probs=220.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
.+.+.-+.+.+.++.+++++|.+.. ++.++ .++|++...++.++. ++++++..|++++.+|+++
T Consensus 115 isQG~Leal~~~Qt~la~LtG~~~a-naSl~-d~aTAa~ea~~~a~~--------------~~~~~~~~vlv~~~~hP~~ 178 (954)
T PRK05367 115 ISQGRLEALLNFQTMVADLTGLEIA-NASLL-DEATAAAEAMALAKR--------------VSKSKSNRFFVDDDVHPQT 178 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCChh-hcccc-ccHHHHHHHHHHhhh--------------hccCCCCEEEEcCccCHHH
Confidence 4556778889999999999999987 78888 567777777766553 3444122799999999999
Q ss_pred HHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...|+. .|++|+.++.+.+ ++ . +++ .+++.+..|.+|.+.|+++|+++||++|+++++|+
T Consensus 179 ~~v~~t~a~~~G~ev~~~~~~~d--~~--------~-----~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda 242 (954)
T PRK05367 179 LDVLRTRAEPLGIEVVVGDAAKA--LD--------H-----DDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAA 242 (954)
T ss_pred HHHHHHHHHhCCCEEEEecCccC--CC--------c-----ccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEe
Confidence 988753 6999999987542 11 1 344 44556667899999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCC-----CCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKF-----LGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
.+.+.....+..++ |+|+++.+.||| +|||+ .|++++++++ .+.+++...|+..-..-++ ......+.
T Consensus 243 ~~~Al~~l~~pge~---GaDi~vgs~qkfg~P~g~GGP~-aGflavr~~~--~r~lpgrivG~s~d~~g~~-~~~lalqt 315 (954)
T PRK05367 243 DLLALTLLTPPGEM---GADIAVGSAQRFGVPMGFGGPH-AAYFAVRDAY--KRSMPGRIVGVSVDAAGNP-ALRLALQT 315 (954)
T ss_pred hhhhccCCCChhhc---CCCEEEeeCcccCCCCCCCCCC-EEEEEECHHH--HhhCCCCeeeeecccCCCc-cccccccc
Confidence 66444343444554 899999999999 78884 8999999998 5677766666532000000 00001122
Q ss_pred ccccccccCCChhHHHH--H---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec
Q 038499 346 EDIEERESGGTPQVIQM--I---RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~--~---~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~ 420 (609)
.....|++.+|+|+... + .+++-.......|.+++.++...++.++.++|+. +|+++..+ .....+.+.+.
T Consensus 316 ReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~---~~f~~~~~~~~ 391 (954)
T PRK05367 316 REQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHD---SFFDTLTVEVG 391 (954)
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCC---CCCCeEEEeCC
Confidence 22345677888877532 1 2222112235679999999999999999999977 58887654 23455555532
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
.+..++.+.|.+ .||.++.- .++.+|+
T Consensus 392 -------------------~~~~~i~~~l~~-~gi~~~~~---------------------------------~~~~l~i 418 (954)
T PRK05367 392 -------------------GDAAAVLARALA-AGINLRRV---------------------------------DDDHVGI 418 (954)
T ss_pred -------------------CCHHHHHHHHHH-CCceeccc---------------------------------cCCEEEE
Confidence 246789999976 59987510 1367999
Q ss_pred ecCCCCCHHHHHHHHHHHH
Q 038499 501 SFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~ 519 (609)
|++.++|++||+.++++|.
T Consensus 419 s~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 419 SLDETTTREDLAALLAVFG 437 (954)
T ss_pred EecccCCHHHHHHHHHHHc
Confidence 9999999999999999997
No 165
>PLN02656 tyrosine transaminase
Probab=99.89 E-value=1e-20 Score=204.16 Aligned_cols=340 Identities=13% Similarity=0.027 Sum_probs=214.3
Q ss_pred ceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------CCCCCcEEEe
Q 038499 77 RLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------GGQEDAMIFC 145 (609)
Q Consensus 77 ~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------~~~~~~vift 145 (609)
+++-|.-+.. -++|+.+.+++.+.+..- ....|....+ ..++|+.++++++ .+++ +|++|
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~-~i~~t 102 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN----KFNGYAPTVG----LPQARRAIAEYLSRDLPYKLSLD-DVFIT 102 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC----CCCCCCCCCC----CHHHHHHHHHHHHHhcCCCCCcc-cEEEe
Confidence 4555554443 356778888887766531 1101111112 3445556666553 3454 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRS 223 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~ 223 (609)
+|+++++..++.++ +++|| .|+++.+.|+.+...++..|++++.++++. ++.+|+++|++
T Consensus 103 -~G~~~al~~~~~~l---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~ 164 (409)
T PLN02656 103 -SGCTQAIDVALSML---------------ARPGA--NILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEA 164 (409)
T ss_pred -CChHHHHHHHHHHH---------------hCCCC--eEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHH
Confidence 78888999888776 37888 699999999888777788899999999853 45799999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcC
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLST 296 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~ 296 (609)
+++ ++++++++++++||||.+.+ +++|+++|++||+++|+|++++.-. ....+........-+++.|+
T Consensus 165 ~~~-----~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 239 (409)
T PLN02656 165 LAD-----QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSL 239 (409)
T ss_pred Hhc-----cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEccc
Confidence 887 57899999999999999965 7788999999999999999976321 11111111111234677899
Q ss_pred CCCCCCCC-CcEEEEEec--------hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHH
Q 038499 297 HKFLGGPG-SPGILLMTK--------ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAAL 367 (609)
Q Consensus 297 hK~lggp~-g~G~L~~~~--------~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal 367 (609)
+|.++.|+ .+|++++++ ++ ++.+... .. ...+.+.+.+. ++
T Consensus 240 SK~f~~pGlRiG~~i~~~~~~~~~~~~~--~~~~~~~------------------------~~-~~~~~s~~~q~---a~ 289 (409)
T PLN02656 240 SKRWIVPGWRLGWFVTTDPSGSFRDPKI--VERIKKY------------------------FD-ILGGPATFIQA---AV 289 (409)
T ss_pred chhccCcceeEEEEEEeCcccccccHHH--HHHHHHH------------------------Hh-hhcCCCHHHHH---HH
Confidence 99977664 599999852 33 1111100 00 01122223332 22
Q ss_pred HHHHHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH
Q 038499 368 AFWVKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV 445 (609)
Q Consensus 368 ~~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v 445 (609)
..++.+ ....+..+++.++.++.+.+.|+.++++..... +..+++.|...+... -....+..++
T Consensus 290 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~---p~gg~~~w~~l~~~~-----------~~~~~~~~~~ 355 (409)
T PLN02656 290 PTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHK---PEGSMAVMVKLNLSL-----------LEDISDDIDF 355 (409)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcC---CCeEEEEEEecchhh-----------cCCCCCHHHH
Confidence 222221 113455666777778888899987755432211 244555555433000 0000123344
Q ss_pred -HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 446 -ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 446 -~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++| .+.||.+++|..|. .++++||+++. ++++++..++.|+.++.+
T Consensus 356 ~~~~l-~~~gV~v~pg~~fg-----------------------------~~~~iRi~~~~--~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 356 CFKLA-REESVIILPGTAVG-----------------------------LKNWLRITFAA--DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred HHHHH-HhCCEEEecchhcC-----------------------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 4555 55799999887653 14899999983 788888888888887754
No 166
>PLN02452 phosphoserine transaminase
Probab=99.89 E-value=1e-20 Score=199.16 Aligned_cols=335 Identities=13% Similarity=0.129 Sum_probs=226.5
Q ss_pred CCChHHHHHHHHHhhcCCccC--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 87 GRSLRYIENYIINNVLPFYGN--THTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
...|+.|++++.+.+..+-+. ...+.++.+..+.+++.++++.++++++.+.+.+|+|..+|+|.++.++..-+
T Consensus 16 ~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl---- 91 (365)
T PLN02452 16 ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNL---- 91 (365)
T ss_pred CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhc----
Confidence 456789999998877654211 11123456677889999999999999998655567666556666787776654
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCC---CCCHHHHHHHHhhhccCCCceEEEE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDG---LLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g---~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
+++|++ +++-.....+.. ..++..|...+.....+.+ .++++++ +.+ ++...+.+
T Consensus 92 -----------~~~~~~--~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~v~~ 151 (365)
T PLN02452 92 -----------CKPGDK--ADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT---PDAKFVHI 151 (365)
T ss_pred -----------CCCCCe--EEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC---CCCcEEEE
Confidence 467775 333333333322 2345567644444222222 4566664 211 46789999
Q ss_pred ecccCccccc-cCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 240 SACSNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 240 s~~sn~TG~~-~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
+|+.+.||+. .|++++.+ +++++|+++++++.++|+.++ + ++++|.||.+| |.|+|++++++++ +
T Consensus 152 ~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~~---~--v~~~saqK~lG-P~Gl~~v~vr~~~--l 217 (365)
T PLN02452 152 CANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSKY---G--VIYAGAQKNVG-PSGVTIVIIRKDL--I 217 (365)
T ss_pred CCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHHc---C--EEEEecccccC-CCCeEEEEEcHHH--H
Confidence 9999999994 88887753 899999999999999999876 4 45579999996 9999999999999 5
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
.+..+..+. ...+ ..+. +.....+||++..+.. ++++++. +..|.+.+.++++++++++++.|+
T Consensus 218 ~~~~~~~~~--~~~~--------~~~~---~~~s~~~TP~v~~i~~l~~aL~~l~-~~gGl~~~~~r~~~~a~~l~~~l~ 283 (365)
T PLN02452 218 GNARPITPG--MLDY--------KIHA---ENDSLYNTPPCFGIYMCGLVFEDLL-AQGGLKAMEKRNIRKADLLYDAID 283 (365)
T ss_pred hhcccCCCc--hhhH--------HHHH---hcCCccCChhHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHHHHH
Confidence 554332111 1000 0001 1123347998877654 4555442 334899999999999999999999
Q ss_pred CCCceEEeCC-CC-C-CCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 397 PNQNIKILGN-TS-T-KRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 397 ~~p~i~v~~~-~~-~-~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
+.+|+ +.+ .+ . .+..+++|.+.. .. ....+.+.+.+ .|+..-.| |+.
T Consensus 284 ~~~G~--y~~~~~~~~rs~~~vsF~~~~-~~----------------~~~~f~~~~~~-~g~~~~~G--------~r~-- 333 (365)
T PLN02452 284 ESNGF--YVCPVEKSVRSLMNVPFTLGG-SE----------------LEAEFVKEAAK-AGMVQLKG--------HRS-- 333 (365)
T ss_pred hCCCc--ccCCCChHHhCCeEEEEEcCC-ch----------------hHHHHHHHHHH-CCCcccCC--------ccc--
Confidence 88777 222 11 1 244588888765 21 34577777754 69877654 322
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
-|.+|+|+-..++.++++.|++.|++..++
T Consensus 334 ---------------------~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 334 ---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred ---------------------cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 133999998889999999999999987654
No 167
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.6e-21 Score=202.88 Aligned_cols=324 Identities=16% Similarity=0.085 Sum_probs=213.4
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGTT 150 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGtt 150 (609)
.+.|+.+... +.++.+.+++.+.+.....+.. .| ...+ ..++|+.+++++ | .+++ +|++| +|++
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~--~Y-~~~g----~~~lr~aia~~~~~~~~~~~~~~-~I~it-~G~~ 98 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLN--RY-PDRD----AVALRADLAAYLTAQTGVGLTVE-NVWAA-NGSN 98 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhc--cC-CCCc----hHHHHHHHHHHhhhhccCCCChh-hEEEC-CCHH
Confidence 4556655433 4667788888776542111111 11 1111 345666666666 4 5565 88888 8999
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+++..++.++. ++|| .|++..+.|+.+...++..|++++.++.++++.+|++++++++.+
T Consensus 99 ~~l~~~~~~~~---------------~~gd--~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~--- 158 (368)
T PRK03317 99 EILQQLLQAFG---------------GPGR--TALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAE--- 158 (368)
T ss_pred HHHHHHHHHhc---------------CCCC--EEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc---
Confidence 99999988873 7888 688899999988888888899999998776778999999999974
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc-cc-ccCCCC-CCCCccEEEEcCCCCCCCC-CCc
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY-VE-IDVRSG-QTDGYDAIFLSTHKFLGGP-GSP 306 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~-~~-id~~~~-~~~~~D~v~~S~hK~lggp-~g~ 306 (609)
.+++++++++++||||.+.+.+++.++++.+++++|+|++++... .. ...... ......+++.|++|.+|.| ..+
T Consensus 159 -~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRi 237 (368)
T PRK03317 159 -HRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRL 237 (368)
T ss_pred -cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhh
Confidence 468888999999999999999999999999999999999977421 11 000000 0012235667999999854 358
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~ 385 (609)
|++++++++ ++.+.... ...+.+.+.+.+ .+++. +........++.+
T Consensus 238 G~~~~~~~~--~~~l~~~~--------------------------~~~~~s~~~~~a~~~~l~----~~~~~~~~~~~~~ 285 (368)
T PRK03317 238 GYLAAAPAV--VDALRLVR--------------------------LPYHLSAVTQAAARAALR----HADELLASVAALR 285 (368)
T ss_pred hhhhCCHHH--HHHHHhcC--------------------------CCCCCCHHHHHHHHHHhh----CHHHHHHHHHHHH
Confidence 999998887 33321110 001122222221 12221 1111222334456
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+.++++.+.|+.. ++.+..+ ..+++.|.... +...+.+.|.+ .||.+++. .
T Consensus 286 ~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-------------------~~~~~~~~l~~-~Gv~v~~~---~- 336 (368)
T PRK03317 286 AERDRVVAWLREL-GLRVAPS----DANFVLFGRFA-------------------DRHAVWQGLLD-RGVLIRDV---G- 336 (368)
T ss_pred HHHHHHHHHHHHC-CCEeCCC----CCcEEEEeccC-------------------CHHHHHHHHHH-CCEEEEeC---C-
Confidence 6677788888776 6766544 23444432222 35678888865 69999832 1
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +.+++++++++|+++..
T Consensus 337 ----------------------------~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 ----------------------------IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred ----------------------------CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 1489999987 78999999999998864
No 168
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.5e-21 Score=202.44 Aligned_cols=292 Identities=16% Similarity=0.055 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
..++|+.+++++|++++ +|++| +|++++|..++..+. .+| + .|+++++.|..+...++..
T Consensus 61 ~~~lr~~ia~~~~~~~~-~I~~t-~G~~~~l~~~~~~~~---------------~~g~~--~vlv~~p~y~~~~~~~~~~ 121 (364)
T PRK04781 61 PPGLRSALAALYGCAPE-QLLIG-RGSDEAIDLLVRALC---------------VPGRD--AVLVTPPVFGMYAVCARLQ 121 (364)
T ss_pred HHHHHHHHHHHhCcChH-HEEEe-CCHHHHHHHHHHHhc---------------CCCCC--eEEEcCCChHHHHHHHHHc
Confidence 35789999999999886 89998 899999999988763 677 5 6888888777666666788
Q ss_pred CceEEEEecCC--C-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCc
Q 038499 202 LAEVVEIGLDD--D-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPY 276 (609)
Q Consensus 202 G~~vv~v~~~~--~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~ 276 (609)
|++++.++++. + ..+|++++.+++.. ++++++++++++||||.+.|.+++.++++. +++++|+|+++....
T Consensus 122 g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~ 197 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHADVPAIVAAALA----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFS 197 (364)
T ss_pred CCEEEEEecCCCccCCCcCHHHHHHHHhc----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhc
Confidence 99999999842 3 35789998766543 579999999999999999999988888875 478999999965321
Q ss_pred ccccCCC-CCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRS-GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~-~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....... .....--+++.|++|.+|-| ..+|++++++++ ++.+.... . ..
T Consensus 198 ~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l--~~~l~~~~------------------------~--~~ 249 (364)
T PRK04781 198 DVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAEL--IAVLRRCQ------------------------A--PY 249 (364)
T ss_pred CCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHH--HHHHHhcc------------------------C--CC
Confidence 1111100 00112246778999999844 459999999888 33332110 0 01
Q ss_pred CChhHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCC
Q 038499 355 GTPQVIQMIRAALAFWVKEY--IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~--~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~ 432 (609)
+...+.+. ++..++ .+. .......++.++.++.+.+.|+.++++....+. . +++.|...+
T Consensus 250 ~~~~~~~~--~a~~~l-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~---~-g~f~~~~~~----------- 311 (364)
T PRK04781 250 PVPTPCAA--LAEQAL-SAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS---Q-GNFLLVRFD----------- 311 (364)
T ss_pred CCCHHHHH--HHHHHH-hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC---C-CcEEEEEcC-----------
Confidence 12222222 222222 111 112233345566778888999888776423331 2 344443333
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
+..++.+.|.+ .||.+++|..+.+ .++++||+++ +.++.+
T Consensus 312 --------~~~~~~~~l~~-~gI~v~~~~~~~~----------------------------~~~~~Ris~~---~~~~~~ 351 (364)
T PRK04781 312 --------DAEAAFQALLA-AGVVVRDQRAAPR----------------------------LSDALRITLG---TPEQND 351 (364)
T ss_pred --------CHHHHHHHHHH-CCeEEeeCCCCCC----------------------------CCCeEEEeCC---CHHHHH
Confidence 24677788854 6999998754321 1479999998 899999
Q ss_pred HHHHHHHHHHH
Q 038499 513 FTLEALEFIAI 523 (609)
Q Consensus 513 ~ll~al~~v~~ 523 (609)
+++++|+.+.+
T Consensus 352 ~l~~al~~~~~ 362 (364)
T PRK04781 352 RVLAALQRTQA 362 (364)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 169
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.89 E-value=4e-21 Score=201.40 Aligned_cols=276 Identities=20% Similarity=0.161 Sum_probs=192.0
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA 203 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (609)
.++|+.+++++|.+++ +|++| +|+++++..+..++ .+|+ |++..+.|+.+...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-~i~~t-~G~~~~i~~~~~~l----------------~~g~---vl~~~p~y~~~~~~~~~~g~ 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-SVLPV-NGAQEAIYLLPRLL----------------APGR---VLVLAPTYSEYARAWRAAGH 108 (330)
T ss_pred HHHHHHHHHHhCCChh-hEEEC-CCHHHHHHHHHHHh----------------CCCe---EEEeCCCcHHHHHHHHHcCC
Confidence 6789999999998776 89998 89999998876654 4553 77778889998888999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
+++.++ |+++|++++. +++++++++|+||||.+.| +++|+++|++||+++|+|+++.......+
T Consensus 109 ~~~~~~-------d~~~l~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 175 (330)
T TIGR01140 109 EVVELP-------DLDRLPAALE------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDAS 175 (330)
T ss_pred EEEEeC-------CHHHHHhhcc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccc
Confidence 999987 7899988875 4678899999999999999 55678888999999999999763321112
Q ss_pred CCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 281 VRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 281 ~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+... ...+.++++.|++|++|.| .++|++++++++ ++.+.+... ..+.+
T Consensus 176 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~--~~~l~~~~~---------------------------~~~~s 226 (330)
T TIGR01140 176 LAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPAL--LARLREALG---------------------------PWTVN 226 (330)
T ss_pred hhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHH--HHHHHhcCC---------------------------CCCch
Confidence 2111 1124468899999999855 348999999887 333322210 01111
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
..+ ..++..++ ++....+.++++.+++++++.+.|++++.+++..+ .+.+.+.-.+
T Consensus 227 ~~~-q~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~f~~~~~~----------------- 282 (330)
T TIGR01140 227 GPA-RAAGRAAL-ADTAWQAATRARLAAERARLAALLARLGGLEVVGG-----TALFLLVRTP----------------- 282 (330)
T ss_pred HHH-HHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-----CCeEEEEEcC-----------------
Confidence 111 12222222 22222356778888899999999998866666432 2344333332
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
+..++.+.|.+ .||.+++|..+.+. .++++||+++ ...++ ++++.+|
T Consensus 283 --~~~~l~~~l~~-~gi~v~pg~~f~~~---------------------------~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 --DAAALHEALAR-RGILIRDFDNFPGL---------------------------DPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred --CHHHHHHHHHH-CCEEEEECCCCCCC---------------------------CCCEEEEEec--CHHHH-HHHHHhh
Confidence 34678888876 59999998765310 1479999997 23344 8888876
Q ss_pred H
Q 038499 519 E 519 (609)
Q Consensus 519 ~ 519 (609)
+
T Consensus 330 ~ 330 (330)
T TIGR01140 330 A 330 (330)
T ss_pred C
Confidence 3
No 170
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=198.54 Aligned_cols=201 Identities=13% Similarity=0.082 Sum_probs=150.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
..++|+.+... +.++.+.+++.+.+... +.+ .|. . ....++|+++++++|.+++ +|++| +|+++++..
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~Y~-~----~g~~~lr~~ia~~~~~~~~-~I~~t-~G~~~~l~~ 87 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRV--PFN--RYP-H----ITSDPLREAIAEFYGLDAE-NIAVG-NGSDELISY 87 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcC--ccc--cCC-C----CCHHHHHHHHHHHhCcCcc-eEEEc-CCHHHHHHH
Confidence 67899988866 56678888887766421 111 111 0 1246789999999998886 89998 899999987
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++..+ +|| .|+++.+.|+.+...++..|++++.++.+.++.+|++++++++. +++
T Consensus 88 ~~~~~-----------------~gd--~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~------~~~ 142 (337)
T PRK03967 88 LVKLF-----------------EGK--HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAK------NAS 142 (337)
T ss_pred HHHHh-----------------CCC--eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhcc------CCC
Confidence 76542 577 69999999987766778899999999998777899999987643 678
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEec
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTK 313 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~ 313 (609)
++++++|+||||.+.+.++|.++++ +++++|+|+++..-. ...+... ....--+++.|++|.+|.| ..+|++++++
T Consensus 143 ~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~ 220 (337)
T PRK03967 143 AVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFS-GKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE 220 (337)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhc-ccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCH
Confidence 8889999999999999999999995 799999999975321 1011000 0012246778999999844 4599999988
Q ss_pred hh
Q 038499 314 AL 315 (609)
Q Consensus 314 ~~ 315 (609)
++
T Consensus 221 ~~ 222 (337)
T PRK03967 221 EI 222 (337)
T ss_pred HH
Confidence 77
No 171
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=2.6e-21 Score=206.69 Aligned_cols=307 Identities=17% Similarity=0.147 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.+++++|++. .++++ +|+. ++..++..+ +++|| .|+++...|+++...|
T Consensus 62 ~p~~~~le~~lA~l~g~~~--av~~~-sG~~-Ai~~al~al---------------~~~Gd--~Vl~~~~~y~~t~~~~~ 120 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAED--ARGFA-SGMA-AISSTVLSF---------------VEPGD--RIVAVRHVYPDAFRLFE 120 (389)
T ss_pred ChhHHHHHHHHHHHhCCCc--EEEEC-CHHH-HHHHHHHHH---------------hCCCC--EEEEeCCCchHHHHHHH
Confidence 3447889999999999963 46664 8875 666655544 47899 6888888998766444
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
...|++++.++.+ |++++++++. ++++|++++++|+++.+.|+++|+++||+||+++++|++++.+
T Consensus 121 ~~~~~~G~~v~~vd~~-----d~~~l~~~i~------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 121 TILKRMGVEVDYVDGR-----DEEAVAKALP------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred HHHHHcCceEEEeCCC-----CHHHHHHhcc------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 4569999998754 8899988874 5899999999999999999999999999999999999998876
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.....+. .++|++++|+||+++||++ .|+++.++++ ++.+..... ...
T Consensus 190 ~~~~p~~----~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~--~~~l~~~~~------------------------~~~ 239 (389)
T PRK05968 190 VFQRPIT----LGVDLVIHSASKYLGGHSDTVAGVVAGSKEH--IARINAEAY------------------------PYL 239 (389)
T ss_pred hccCchh----cCCcEEEeeccccccCCCCeEEEEEEECHHH--HHHHHHHHH------------------------HhC
Confidence 4322221 2789999999999999865 6888888776 222211100 000
Q ss_pred CCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeC-CCC--------CCCcceEEEEeccCC
Q 038499 354 GGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILG-NTS--------TKRQAILSFNIHSST 423 (609)
Q Consensus 354 ~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~-~~~--------~~r~~~~~f~~~~~~ 423 (609)
.+. ..+.+ ++. +..........++..+.++++.+.|+++|+++.+. |.- ....++++|.+.+ +
T Consensus 240 g~~~~~~~A----~~~--l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~ 312 (389)
T PRK05968 240 GAKLSPFEA----WLL--LRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-G 312 (389)
T ss_pred CCCCChHHH----HHH--HcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-H
Confidence 111 11111 111 11222445556666777999999999999985443 310 0235688888764 2
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC--ChhhhhhcCCC-hhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA--GPYGHHLLDLD-EAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca--~p~~~~ll~i~-~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
.+...+++.| +.+++.++.|..|+ .|......... .+.. ...|+.++.||+
T Consensus 313 ----------------~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~---------~~~gi~~~liR~ 366 (389)
T PRK05968 313 ----------------IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQPNSA---------ARFGVSPRSVRL 366 (389)
T ss_pred ----------------HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCHHHH---------HhcCCCCCeEEE
Confidence 3567888888 56899999998877 12211111111 1110 013456799999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q 038499 501 SFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v 521 (609)
|++++++++=++.+.++|+.+
T Consensus 367 SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 367 HVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred EeccCCHHHHHHHHHHHHHHh
Confidence 999988777777777777643
No 172
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=7.2e-21 Score=203.86 Aligned_cols=308 Identities=15% Similarity=0.135 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
...+++++.++++.|++ +.+++ ++|+ +++..++..+ +++|| .|+++.+.|+.....+
T Consensus 60 p~~~~Le~~lA~l~g~~--~~v~~-~sG~-~Ai~~~l~al---------------l~pGD--~Vvv~~p~Y~~t~~~~~~ 118 (405)
T PRK08776 60 PTRDLLGEALAELEGGA--GGVIT-ATGM-GAINLVLNAL---------------LQPGD--TLVVPHDAYGGSWRLFNA 118 (405)
T ss_pred hHHHHHHHHHHHHhCCC--ceEEE-cCHH-HHHHHHHHHH---------------hCCCC--EEEEccCCchHHHHHHHH
Confidence 34667889999999974 25555 4785 6888887766 47999 6888888888754433
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
...|.+++.++. .|+++|+++++ ++++++++++++||||.+.|+++|+++||++|+++++|++++.+.
T Consensus 119 ~~~~~g~~v~~v~~-----~d~~~l~~~i~-----~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 119 LAKKGHFALITADL-----TDPRSLADALA-----QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred HHHhcCcEEEEECC-----CCHHHHHHhcC-----cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 335788888865 38899999987 589999999999999999999999999999999999999988765
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|++++|+||+++|+++ .|+++.+++.. .+++... .....
T Consensus 189 ~~~pl~----~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l-~~~l~~~-------------------------~~~~g 238 (405)
T PRK08776 189 LQKPLE----FGADLVLHSTTKYINGHSDVVGGAVVARDAEL-HQQLVWW-------------------------ANALG 238 (405)
T ss_pred cCCccc----ccCCEEEecCceeecCCCCceEEEEEeCCHHH-HHHHHHH-------------------------HHhcC
Confidence 432222 2789999999999998865 57777754331 1121100 00001
Q ss_pred CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEEec
Q 038499 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFNIH 420 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~~~ 420 (609)
.+++.... .+.. ......+...++..+++..+.+.|+++|.+. |.-|.- ....++++|.+.
T Consensus 239 ~~~s~~~a---~l~~--~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 239 LTGSPFDA---FLTL--RGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred CCCCHHHH---HHHH--hhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 11221111 1111 1222456667788888999999999998875 443321 123568888876
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. +. .....+.+.| +.+.+.+.-|...+ .|.......+.++... ..|+.++.
T Consensus 314 ~-~~---------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~~l 367 (405)
T PRK08776 314 G-GE---------------AAVRAFVDGL-RYFTLAESLGGVESLIAHPASMTHAAMTAEARA---------AAGISDGL 367 (405)
T ss_pred C-CH---------------HHHHHHHHhC-CcceEccCCCCCceEEECCcccccccCCHHHHH---------hcCCCCCe
Confidence 4 21 1123455555 44555565554322 1221111122221111 14667899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~ 520 (609)
||||++.-..++=++.+-++|+.
T Consensus 368 iR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 368 LRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred EEEEeCcCCHHHHHHHHHHHHHH
Confidence 99999976554445555555544
No 173
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=5.9e-21 Score=204.05 Aligned_cols=306 Identities=19% Similarity=0.152 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
....+++++.+++++|++ .++++++|+. |+..++..+ +++|| .|++++..|.+....+
T Consensus 60 ~p~~~~le~~la~l~g~~---~~v~~ssG~~-Ai~~al~al---------------~~~Gd--~Vi~~~~~y~~t~~~~~ 118 (390)
T PRK08133 60 NPTVTMFQERLAALEGAE---ACVATASGMA-AILAVVMAL---------------LQAGD--HVVSSRSLFGSTVSLFE 118 (390)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEECCHHH-HHHHHHHHH---------------hCCCC--EEEEccCcchhHHHHHH
Confidence 455788999999999985 3566646654 666665554 47898 6999999998876544
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
+..|++++.++.+ |+++++++++ ++|++|++++++||||.+.|+++|+++||+||+++++|++++.+
T Consensus 119 ~~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~ 188 (390)
T PRK08133 119 KIFARFGIETTFVDLT-----DLDAWRAAVR-----PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTP 188 (390)
T ss_pred HHHHHcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccc
Confidence 4579999999864 7899999997 68999999999999999999999999999999999999998766
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC-c-EEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS-P-GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~-G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.....+. .++|+++.|+||+++|++. . |+++.+++. +..+... .+..
T Consensus 189 ~~~~pl~----~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~--~~~~~~~-------------------------~~~~ 237 (390)
T PRK08133 189 ALQQPLK----LGADVVIHSATKYLDGQGRVLGGAVVGSKEL--MEEVFGF-------------------------LRTA 237 (390)
T ss_pred ccCCchh----hCCcEEEeecceeecCCcceEeEEEEcCHHH--HHHHHHH-------------------------HHHh
Confidence 4433221 2679999999999997653 3 777777765 2222110 0000
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEe
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNI 419 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~ 419 (609)
..+.+-.. +.+.+ .....+....++..+.+..+.+.|++.|++. ++-|. + ....++++|.+
T Consensus 238 g~~~~~~~---a~~~l--~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l 312 (390)
T PRK08133 238 GPTLSPFN---AWVFL--KGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEV 312 (390)
T ss_pred CCCCCHHH---HHHHH--cccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEE
Confidence 11111111 11111 1111244445566677888889999888875 33332 1 12356888887
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.. +. -....+.+.| +.+.+.+.-|..-+ .|+......+..+... ..|+.++
T Consensus 313 ~~-~~---------------~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~ 366 (390)
T PRK08133 313 KG-GR---------------EAAWRVIDAT-RLISITANLGDTKTTITHPATTTHGRLSPEARA---------AAGITEG 366 (390)
T ss_pred cC-CH---------------HHHHHHHHhC-CcceEeccCCCcceeeecCCCCCcccCCHHHHH---------hcCCCCC
Confidence 64 21 1233455555 45555555553211 1322221222222111 1466789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.||||++.- +.+.+++-|+..+
T Consensus 367 liR~svGlE----~~~dl~~dl~~al 388 (390)
T PRK08133 367 LIRVAVGLE----DVADIKADLARGL 388 (390)
T ss_pred eEEEEeCcC----CHHHHHHHHHHHh
Confidence 999999964 4555555555443
No 174
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=1.6e-20 Score=200.28 Aligned_cols=330 Identities=14% Similarity=0.072 Sum_probs=204.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
+++.++.+... +.++.+.+++.+....... |....+..++++.+.+++++..| .+++ +|++| +|+++++
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~------Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I~it-~G~~~al 96 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHLLNK------YPKSAGEESLREAQRGFFKRRFKIELKEN-ELIPT-FGTREVL 96 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhccCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEe-cCcHHHH
Confidence 45566544332 3456677777654322111 11112234555566666666667 4555 89998 8999999
Q ss_pred HHHHHHhcccchhhHHHHHHhhh-cCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhcc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCL-RDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKD 230 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~ 230 (609)
..++.++. . ++|| .|+++.+.|+.+...++..|++++.++.+.+ ..+|+++. .+
T Consensus 97 ~~~~~~~~--------------~~~~gd--~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~----- 153 (374)
T PRK05839 97 FNFPQFVL--------------FDKQNP--TIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL----- 153 (374)
T ss_pred HHHHHHHh--------------cCCCCC--EEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh-----
Confidence 88877652 1 3566 7999999999999899999999999999753 34444432 23
Q ss_pred CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcc--c-ccCCCC------CCCCccEEEEcCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYV--E-IDVRSG------QTDGYDAIFLSTHK 298 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~--~-id~~~~------~~~~~D~v~~S~hK 298 (609)
.+++++++++++||||.+.+. ++|+++|++||+++++|++++.-+. + ..+... ...+--+++.|++|
T Consensus 154 -~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 154 -QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred -ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEecccc
Confidence 358999999999999999884 5677889999999999999653211 1 011000 00022477789999
Q ss_pred CCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCH
Q 038499 299 FLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGH 377 (609)
Q Consensus 299 ~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~ 377 (609)
.+|.|+ .+|+++.++++ ++.+... ......+++.+.+.+. ...+ .+....
T Consensus 233 ~~~~~GlRiG~ii~~~~~--~~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l-~~~~~~ 283 (374)
T PRK05839 233 RSSAPGLRSGFIAGDASI--LKKYKAY------------------------RTYLGCASPLPLQKAA--AVAW-LDDEHA 283 (374)
T ss_pred ccCCccceeEEEecCHHH--HHHHHHH------------------------HhhcCCCCChHHHHHH--HHHh-ccchHH
Confidence 887664 59999998877 2222110 0001122333333221 1122 122334
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 378 EVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 378 ~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
+.++++.++.++.+.+.|. +. . +..+++.|.-.+ +..++++.|.++.||.+
T Consensus 284 ~~~~~~~~~~~~~~~~~l~----~~--~----p~gg~fi~~~~~-------------------~~~~~~~~l~~~~gi~v 334 (374)
T PRK05839 284 EFFRNIYAKNLKLAREILG----IT--I----PPATFYVWLPVD-------------------NDEEFTKKLYQNEGIKV 334 (374)
T ss_pred HHHHHHHHHHHHHHHHhcC----CC--C----CCeeEEEEEeCC-------------------ChHHHHHHHHHHCCEEE
Confidence 5556666666666666552 22 1 233555554433 24567777766679999
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
++|..|..+. ..++++||+++. +++++...++.|..+++
T Consensus 335 ~pg~~f~~~~-------------------------~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 335 LPGSFLGRNG-------------------------IGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred eCchhhCCCC-------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 9886543110 125899999973 68999999999988764
No 175
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=1.2e-20 Score=203.30 Aligned_cols=342 Identities=13% Similarity=0.003 Sum_probs=208.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh---CCCCCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL---GGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~---g~~~~~~vift~sGttaa 152 (609)
+++.++.+... +.++.+.+++.+.+...........|. ......++|+.+++++ +.+++ +|++| +|++++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~----p~~g~~~lr~aia~~~~~~~~~~d-~I~it-~Ga~~a 107 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYG----PEQGYPFLREAIAENDYRGRIDPE-EIFIS-DGAKCD 107 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCC----CCCCCHHHHHHHHHHHHhcCCCHH-HEEEC-CCcHHH
Confidence 56777766544 346678888877665431111110111 1122456777888765 56675 89998 899999
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc-----------eEEEEecCCCCCCCHHHH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA-----------EVVEIGLDDDGLLDIEAL 221 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-----------~vv~v~~~~~g~ld~e~L 221 (609)
+..+... +.+|| .|++..+.|+.+...++..|+ +++.++.++++.++++ +
T Consensus 108 l~~l~~l----------------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 168 (402)
T TIGR03542 108 VFRLQSL----------------FGSDN--TVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD-L 168 (402)
T ss_pred HHHHHHh----------------cCCCC--EEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCC-c
Confidence 9876543 35788 699999999999988999999 9999988653223222 1
Q ss_pred HHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC-CCccEEE
Q 038499 222 RSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT-DGYDAIF 293 (609)
Q Consensus 222 ~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~-~~~D~v~ 293 (609)
.+ . .+++++++++++||||.+.+ +++|+++|++||+++|+|+++..-. .+..+..... .+..+++
T Consensus 169 ~~--~-----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~ 241 (402)
T TIGR03542 169 PE--E-----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEF 241 (402)
T ss_pred cc--c-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEE
Confidence 11 1 46899999999999999998 6778999999999999999976321 1122221111 1234667
Q ss_pred EcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 294 LSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 294 ~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
.|++|.+|.|+ .+|++++++++ +........ ..+... ......+.+.+.+.+ +..++ .
T Consensus 242 ~SfSK~~g~pGlRiG~~i~~~~l--~~~~~~~~~---------------~~~~~~-~~~~~~~~s~~~q~~--~~~~l-~ 300 (402)
T TIGR03542 242 RSFSKTAGFTGVRLGWTVVPKEL--TYADGHSVI---------------QDWERR-QCTKFNGASYPVQRA--AEAAY-A 300 (402)
T ss_pred ecCccccCCCCcceEEEEecHHH--hhcchhhHH---------------HHHHHH-hhhcccCCCHHHHHH--HHHHH-c
Confidence 89999998554 59999999887 211000000 000000 000001222233322 22222 1
Q ss_pred Hhc--CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 373 EYI--GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 373 ~~~--g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
+.. ......+..++.++++.+.|+.. ++++..+ ..+++.|...+ .. ++..++.+.|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~----~~~~f~~v~l~-~~---------------~~~~~l~~~l~ 359 (402)
T TIGR03542 301 GEGLQPILEAISYYMENARILRKALEAA-GFKVYGG----EHAPYLWVKTP-EG---------------ISSWDFFDFLL 359 (402)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCC----CceeEEEEECC-CC---------------CCHHHHHHHHH
Confidence 111 12233455566677788888775 6666543 23444444444 11 35667888877
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
++.||.+++|..|... .++++||++. .++++++..++.|+.+
T Consensus 360 ~~~gv~v~pg~~f~~~---------------------------~~~~iRis~~--~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 360 YQYHVVGTPGSGFGPS---------------------------GEGFVRFSAF--GKRENIVEACERIKEA 401 (402)
T ss_pred HhCCEEEeCchhhCCC---------------------------CCCEEEEEec--CCHHHHHHHHHHHHhh
Confidence 6679999988655310 2489999974 3788888888888754
No 176
>PLN02271 serine hydroxymethyltransferase
Probab=99.88 E-value=5.3e-20 Score=197.32 Aligned_cols=357 Identities=16% Similarity=0.116 Sum_probs=232.0
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCC-CchhhHHHH-HHHHHHHHHHHHHhCCCCC---CcEEEeCChHHHHHHHHHHHhc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTC-DSYVGQHTT-NMVHEASNYIKKCLGGGQE---DAMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~-~~~~~~~~~-~~~~e~r~~ia~~~g~~~~---~~vift~sGttaal~~l~~~l~ 161 (609)
....+.|.+++...+...|+....+ .++.|.... ++..-+.+..++++|++.+ .+|-.- ||+.+++..+.. +
T Consensus 158 N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~A-L- 234 (586)
T PLN02271 158 NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTG-L- 234 (586)
T ss_pred ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHH-h-
Confidence 3566778888877777766543322 244454433 4556677888999998762 145554 899876555533 3
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---------HHcCceEEEEe--cC-CCCCCCHHHHHHHHhhhc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---------RQSLAEVVEIG--LD-DDGLLDIEALRSKLELYK 229 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---------~~~G~~vv~v~--~~-~~g~ld~e~L~~al~~~~ 229 (609)
++||| .|+..+.+|.++.... ...|..+..++ ++ ++|.+|.++|++.+..
T Consensus 235 --------------l~PGD--~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~-- 296 (586)
T PLN02271 235 --------------LLPGD--RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD-- 296 (586)
T ss_pred --------------cCCCC--EEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh--
Confidence 48999 5999888888876543 23455444444 65 4789999999995543
Q ss_pred cCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 230 DAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
.+||+|++.+..++ ...|+++|.++|+++|+++++|.||.+|.+..+..+....++|+++++.||||.||.| |++
T Consensus 297 --~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I 371 (586)
T PLN02271 297 --FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GII 371 (586)
T ss_pred --cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEE
Confidence 69999999988888 7799999999999999999999999999988776644445799999999999999999 888
Q ss_pred EEechhhccCCCCCCccCCCceEeeccccccccccccccc----ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE----ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~----~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+++++. .....+...+++. ......+...+. -..++|+.+-. ++..+.++............++..
T Consensus 372 ~~r~~~--~~~~~g~~gs~s~-------~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAvalkea~~~efk~Ya~QVv 441 (586)
T PLN02271 372 FYRKGP--KLRKQGMLLSHGD-------DNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIALKQVATPEYKAYMQQVK 441 (586)
T ss_pred Eecccc--cccccCCcccccc-------ccccHHHHHHhhcccCCccccChhHHH-HHHHHHHHHHHhChHHHHHHHHHH
Confidence 888776 2222222222221 000111111110 13445554322 322233332112334567778888
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++.+.+.|.+. |++|+...... -.+.+.+.+ ..+++..+.+.| +..||.+..-.-
T Consensus 442 ~NAkaLA~~L~~~-G~~vv~ggTdn--HlvLvDl~~----------------~g~~G~~ae~~L-e~~~I~~Nkn~i--- 498 (586)
T PLN02271 442 KNAQALASALLRR-KCRLVTGGTDN--HLLLWDLTT----------------LGLTGKNYEKVC-EMCHITLNKTAI--- 498 (586)
T ss_pred HHHHHHHHHHHHC-CCeEeeCCCCc--ceeeecCcc----------------cCCCHHHHHHHH-HHcCeEeccccC---
Confidence 8899999999876 89988653222 222223322 125667777777 667998863221
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHHHHHHH
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP----YYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~----~~~t~eeid~ll~al~~v~~ 523 (609)
|... ....++.|||... .-+.++|++.+.+.|..++.
T Consensus 499 P~d~---------------------~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 499 FGDN---------------------GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCC---------------------CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 1100 0113678898864 33467999999999988887
No 177
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=8.7e-21 Score=202.93 Aligned_cols=311 Identities=16% Similarity=0.112 Sum_probs=200.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+++......+++++.++++.|++. .++|+ +|+. ++..++..+ +++|| .|+++...|++.
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~~--~i~~s-sG~~-Ai~~~l~al---------------l~~GD--~Vi~~~~~y~~~ 116 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAEA--ATAFS-TGMA-AISNTLYTF---------------LKPGD--RVVSIKDTYGGT 116 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCCe--EEEeC-ChHH-HHHHHHHHh---------------cCCCC--EEEEcCCchHHH
Confidence 344445667889999999999752 45554 7765 677666554 47899 799999999887
Q ss_pred HHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...| +..|++++.++. .|+++++++|+ ++|++|++++++||||.+.|+++|+++||+||+++++|+
T Consensus 117 ~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~-----~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~ 186 (398)
T PRK08249 117 NKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIA-----KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDN 186 (398)
T ss_pred HHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcC-----CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEEC
Confidence 5544 356888887764 48999999998 689999999999999999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
+++.+...... . .++|+++.|++|++||++. .|+++.++++ ++.+...
T Consensus 187 t~a~~~~~~~l-~---~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l--~~~l~~~------------------------ 236 (398)
T PRK08249 187 TFATPINQNPL-A---LGADLVIHSATKFLSGHADALGGVVCGSKEL--MEQVYHY------------------------ 236 (398)
T ss_pred CcCccccCCch-h---hCCCEEeccCceecCCCCCceEEEEECCHHH--HHHHHHH------------------------
Confidence 98866433222 1 2789999999999997753 4777777666 2222111
Q ss_pred cccccCCC-hhHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCc
Q 038499 349 EERESGGT-PQVIQM-IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQ 412 (609)
Q Consensus 349 ~~r~~~gt-p~i~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~ 412 (609)
.+...++ ....+. +..+ ....+...++..+++..+.+.|+++|.++ |+-|.- ....
T Consensus 237 -~~~~g~~~s~~~a~l~l~~-------l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g 308 (398)
T PRK08249 237 -REINGATMDPMSAYLILRG-------MKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFG 308 (398)
T ss_pred -HHhcCCCCCHHHHHHHHhC-------cchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCC
Confidence 0001111 111111 1111 11234445667788888999999888775 444421 1235
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
++++|.+.. +. .....+++.| +.+.+.+.-|...+ .|.......+..+...
T Consensus 309 ~~~sf~~~~-~~---------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~--------- 362 (398)
T PRK08249 309 GILSFVLKG-GM---------------DTVKRLLPKL-RYAHRAANLGAVETIYGPARTTSHVENTLEERA--------- 362 (398)
T ss_pred ceEEEEEcC-CH---------------HHHHHHHHhC-CcceEccCCCCCCceeeCCcccccccCCHHHHH---------
Confidence 688888764 21 1234555555 45555555554322 1211111122221111
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
..|+.++.||||++.-..++=++.+.++|+.
T Consensus 363 ~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 363 ALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 1466789999999975544445555555544
No 178
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.4e-20 Score=200.45 Aligned_cols=306 Identities=15% Similarity=0.118 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
...++++++++++.|.. .++++++| ++++..++..+ +++|| .|+++...|+++...+..
T Consensus 52 pt~~~L~~~lA~l~g~~---~~i~~~sg-~~Ai~~~l~~l---------------~~~GD--~Vl~~~~~y~~~~~~~~~ 110 (386)
T PRK08045 52 PTRDVVQRALAELEGGA---GAVLTNTG-MSAIHLVTTVF---------------LKPGD--LLVAPHDCYGGSYRLFDS 110 (386)
T ss_pred ccHHHHHHHHHHHhCCC---eEEEECCH-HHHHHHHHHHH---------------cCCCC--EEEEcCCCcHHHHHHHHH
Confidence 34678999999999963 46777444 56888887765 47899 699999999876655442
Q ss_pred ----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.|.++..++ ..|+++++++++ ++++++++++++||||.+.|+++|.++||++|+++++|++++.+.
T Consensus 111 ~~~~~gi~v~~vd-----~~d~e~l~~~l~-----~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~ 180 (386)
T PRK08045 111 LAKRGCYRVLFVD-----QGDEQALRAALA-----EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPA 180 (386)
T ss_pred HHhhCCeEEEEeC-----CCCHHHHHHhcc-----cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 345676664 258999999987 689999999999999999999999999999999999999988775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
....+. .++|+++.|+|||++|+.+ .|+++++ +++ ++.+... .....
T Consensus 181 ~~~pl~----~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~--~~~l~~~------------------------~~~~g 230 (386)
T PRK08045 181 LQNPLA----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV--VTELAWW------------------------ANNIG 230 (386)
T ss_pred cCCchh----hCCCEEEeecceeccCCCCceeEEEEeCcHHH--HHHHHHH------------------------HHhcC
Confidence 433332 2789999999999998876 6877775 333 1221100 00000
Q ss_pred CCChhHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEE
Q 038499 354 GGTPQVIQ-MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFN 418 (609)
Q Consensus 354 ~gtp~i~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~ 418 (609)
....+..+ ++..++ ...+...++..+.+..+.+.|+..|.++ |+-|. + ....++++|.
T Consensus 231 ~~~~p~~~~l~~rgl-------~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~ 303 (386)
T PRK08045 231 VTGGAFDSYLLLRGL-------RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFE 303 (386)
T ss_pred CCCCHHHHHHHHhhh-------ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEE
Confidence 11111111 111111 1355566777888889999999998874 44332 1 1235688888
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
+.. +. -....+.+.| +.+.+.+.-|...+ .|.......+.++... ..|+.+
T Consensus 304 ~~~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~ 357 (386)
T PRK08045 304 LDG-DE---------------QTLRRFLGGL-SLFTLAESLGGVESLISHAATMTHAGMAPEARA---------AAGISE 357 (386)
T ss_pred ecC-cH---------------HHHHHHHHhc-cceeEeccCCCCceeEeCCCCcccccCCHHHHH---------hcCCCC
Confidence 754 21 1124555556 45666666554322 1221111122221111 146778
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
+.||||++.-..++-++.+.++|+.
T Consensus 358 ~liR~svGlE~~~dl~~dl~~al~~ 382 (386)
T PRK08045 358 TLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_pred CeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999975555445555555543
No 179
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.88 E-value=3.3e-21 Score=196.10 Aligned_cols=314 Identities=17% Similarity=0.044 Sum_probs=214.9
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
-+.|++|.+++.+.+..- ....|..+++..++...+++.+++++|. .++++|++| +|+.++|...+..+
T Consensus 43 ~~~P~fv~ea~~~~~~~~----~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT-~GA~~ai~~~~~~l---- 113 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNAAKEP----STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVT-AGANEAISSALLGL---- 113 (420)
T ss_pred CCCcHHHHHHHHHHhccc----hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEe-cCchHHHHHHHHHH----
Confidence 478899999998877532 2223567778889999999999998885 355689888 89998888655554
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--------CCCCCCHHHHHHHHhhhccCCCceE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--------DDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--------~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+.+|| +|++..+.|.++....+..|.+++.|+.. .++.+|.+.|+.+++ ++||+
T Consensus 114 -----------~~~GD--eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-----~kTk~ 175 (420)
T KOG0257|consen 114 -----------LNPGD--EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-----EKTKA 175 (420)
T ss_pred -----------cCCCC--EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-----CCccE
Confidence 48999 79999999999999999999999999887 267899999999999 79999
Q ss_pred EEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC----CcccccCCCC-CCCCccEEEEcCCCCCCCCCC--c
Q 038499 237 GSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVEIDVRSG-QTDGYDAIFLSTHKFLGGPGS--P 306 (609)
Q Consensus 237 v~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~----~~~~id~~~~-~~~~~D~v~~S~hK~lggp~g--~ 306 (609)
+++++|+||||.+.+ +++|+++|++||+++|.|+++.. +...+.+..+ +.....+-+.|+.|++| ..| +
T Consensus 176 Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrl 254 (420)
T KOG0257|consen 176 IILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRL 254 (420)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceee-eeeeee
Confidence 999999999999987 67899999999999999999542 2211111111 12234677789999998 444 9
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH-HHHHHHHHHH--HHhc--CH-HHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ-MIRAALAFWV--KEYI--GH-EVI 380 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~-~~~aal~~~~--~~~~--g~-~~i 380 (609)
||++.++.+ +....+. ..+.-...+...+ ...++.+..+ ++-. +. ..+
T Consensus 255 GW~igp~~L--~~~~~~v------------------------h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~ 308 (420)
T KOG0257|consen 255 GWAIGPKHL--YSALFPV------------------------HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITEL 308 (420)
T ss_pred eeeechHHh--hhhHHHH------------------------hhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHH
Confidence 999997666 2232222 1111122222222 2222222211 1112 12 236
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC--CCChHHHHHHHhhhcCcEec
Q 038499 381 KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK--PLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 381 ~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~--~l~~~~v~~~L~~~~GI~v~ 458 (609)
.+..++.++.+.+.|.++ |+++.++.. +.+.+.-.......+ ...+. --+.-.++++|.+..|+.+-
T Consensus 309 ~~~y~~krdil~k~L~~l-g~~v~~p~g----ayyl~adfs~~~~~~------~~~~~~~~~~d~~~~~wl~~~~Gv~~I 377 (420)
T KOG0257|consen 309 VKEYKEKRDILAKALEEL-GLKVTGPEG----AYYLWADFSLAKSWP------FFEEILEKPDDFKFVRWLIKEGGVVVI 377 (420)
T ss_pred HHHHHHHHHHHHHHHHhc-CCccccCCC----ceEEEEeccccccCC------cchhhccCCCceeeehhhhccCcEEEe
Confidence 677788899999999999 999998842 333333222000000 00000 01234577888888999999
Q ss_pred cCcccCC
Q 038499 459 GGCACAG 465 (609)
Q Consensus 459 ~G~~ca~ 465 (609)
+++.+..
T Consensus 378 P~saF~s 384 (420)
T KOG0257|consen 378 PPSAFGS 384 (420)
T ss_pred CchhcCC
Confidence 9888764
No 180
>PRK08175 aminotransferase; Validated
Probab=99.88 E-value=3.7e-20 Score=198.99 Aligned_cols=337 Identities=12% Similarity=0.063 Sum_probs=212.9
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccch
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
+.++.+.+.+.+.+... ... .|....+..++++.+.+++.+.+|. +++++|++| +|+++++..++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~--~~~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t-~G~~~~l~~~~~~~----- 111 (395)
T PRK08175 42 PTPPHIVEKLCEVAQRP--DTH--GYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVT-IGSKEGLAHLMLAT----- 111 (395)
T ss_pred CCCHHHHHHHHHHHhCC--CcC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-cCcHHHHHHHHHHh-----
Confidence 34555666666655321 111 1212222334444455555444454 343368887 89999999887766
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|+++.+.|+.....++..|++++.++.++++. ++++|+++++.. .++++++++++++||
T Consensus 112 ----------~~~gd--~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~--~~~~~~v~i~~p~NP 176 (395)
T PRK08175 112 ----------LDHGD--TVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD-FFNELERAIRES--YPKPKMMILGFPSNP 176 (395)
T ss_pred ----------CCCCC--EEEEcCCCCcchHHHHHHcCCeEEEEecccCCC-cHHHHHHHHhhc--cCCceEEEEeCCCCC
Confidence 47898 699999999998888889999999999876543 588898888631 136899999999999
Q ss_pred cccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCCC-CcEEEEEechhh
Q 038499 246 TGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGPG-SPGILLMTKALY 316 (609)
Q Consensus 246 TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~ 316 (609)
||.+.+. ++|+++|++||+++|+|++++... ....+.... ..+..+++.|++|.+|.|+ ++|+++.++++
T Consensus 177 tG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l- 255 (395)
T PRK08175 177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPEL- 255 (395)
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHH-
Confidence 9999997 678999999999999999965321 111111111 0123466789999998664 48999998887
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.+... ......+++...+.+. ..++.......+.++++.++.++++.+.|+
T Consensus 256 -~~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~ 308 (395)
T PRK08175 256 -VSALARI------------------------KSYHDYGTFTPLQVAA--IAALEGDQQCVRDIAEQYKRRRDVLVKGLH 308 (395)
T ss_pred -HHHHHHH------------------------HhhcccCCCcHHHHHH--HHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332110 0001122223332211 111110111245566667777888888888
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
.+ ++.+..+ ..+++.+...+... ..++..+++..|.++.||.+.+|..|..+
T Consensus 309 ~~-~~~~~~p----~~g~~i~i~l~~~~-------------~~~~~~~~~~~l~~~~gv~v~p~~~f~~~---------- 360 (395)
T PRK08175 309 EA-GWMVEMP----KASMYVWAKIPEPY-------------AAMGSLEFAKKLLNEAKVCVSPGIGFGDY---------- 360 (395)
T ss_pred Hc-CCcccCC----CEEEEEEEECCccc-------------CCCCHHHHHHHHHHhCCEEEeCchhhCcC----------
Confidence 76 6665433 23444444433111 01245778777666679999988765311
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||++. .+++++...++.|..++..
T Consensus 361 -----------------~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 361 -----------------GDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred -----------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 2479999996 4788888888888877753
No 181
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=2.4e-20 Score=203.99 Aligned_cols=352 Identities=14% Similarity=0.117 Sum_probs=219.9
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcC--CccC-----CCCCCchhhHHHHHHHHHHHHHHHHHh----C----CCCCCc
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLP--FYGN-----THTCDSYVGQHTTNMVHEASNYIKKCL----G----GGQEDA 141 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~--~~~n-----~~~~~~~~~~~~~~~~~e~r~~ia~~~----g----~~~~~~ 141 (609)
..|.|+.+.+..+...+.+.+...... +..+ .....|....+ ..++|+.|++++ | .+++ +
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G----~~~LR~aiA~~l~~~~~~~~~v~~~-~ 113 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHG----LPAFKNALAEFMSEIRGNKVTFDPN-K 113 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCC----hHHHHHHHHHHHHHhhCCCCCcChH-H
Confidence 578888888777775565555443110 0000 00000111112 234555555555 3 4555 8
Q ss_pred EEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcCceEEEEecCC--CCCCCH
Q 038499 142 MIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSLAEVVEIGLDD--DGLLDI 218 (609)
Q Consensus 142 vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~g~ld~ 218 (609)
|++| +|+++++..++.++. ++|| .|+++.+.|+.+...+. ..|++++.|+++. +..+|+
T Consensus 114 Iiit-~Ga~~al~~l~~~l~---------------~pGd--~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~ 175 (468)
T PLN02450 114 LVLT-AGATSANETLMFCLA---------------EPGD--AFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITE 175 (468)
T ss_pred eEEc-cChHHHHHHHHHHhC---------------CCCC--EEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCH
Confidence 8887 899999999988773 7899 79999999998877777 5899999999863 457788
Q ss_pred HHHHHHHhhhcc-CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCC-cc---c---ccCC-C---
Q 038499 219 EALRSKLELYKD-AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGP-YV---E---IDVR-S--- 283 (609)
Q Consensus 219 e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~-~~---~---id~~-~--- 283 (609)
++|++++.+... ..+++++++++|+||||.+.+. ++|.++|++||+++|+|++++.- +. . ..+. .
T Consensus 176 ~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~ 255 (468)
T PLN02450 176 SALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKL 255 (468)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhccc
Confidence 999998864211 1378999999999999999885 56788899999999999997631 11 1 1110 0
Q ss_pred --CCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH
Q 038499 284 --GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI 360 (609)
Q Consensus 284 --~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~ 360 (609)
......-+++.|++|.+|.| ..+|+++++++.+ +..+... ......+.+.
T Consensus 256 ~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l-~~~~~~~--------------------------~~~~~~s~~~ 308 (468)
T PLN02450 256 ENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMV-VSAATKM--------------------------SSFGLVSSQT 308 (468)
T ss_pred ccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHH-HHHHHHH--------------------------hhcCCCCHHH
Confidence 00112347788999999744 4599999986541 1111000 0001123333
Q ss_pred HHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCC
Q 038499 361 QMIRAALAFWVKEYI----GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 361 ~~~~aal~~~~~~~~----g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
+.+ +..++.+.. ..+..+++.++.++.+.+.|.++ ++.+..+ ..+++.|.-.+.... .
T Consensus 309 Q~a---~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~----~~g~flwi~l~~~~~----------~ 370 (468)
T PLN02450 309 QYL---LSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKS----NAGLFCWVDMRHLLK----------S 370 (468)
T ss_pred HHH---HHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC----CceEEEEEEchHhcC----------c
Confidence 322 122222211 23445667777788888888877 7766543 345555544330110 0
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLE 516 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~ 516 (609)
........+.+.|.++.||.+.+|..|..+ .++|+||+++. .++++++..++
T Consensus 371 ~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~---------------------------~~g~~Rl~f~~-~~~~~l~~~l~ 422 (468)
T PLN02450 371 NTFEAEMELWKKIVYEVKLNISPGSSCHCT---------------------------EPGWFRVCFAN-MSEETLDLAMK 422 (468)
T ss_pred CCchHHHHHHHHHHHhCCEEEeCccccCCC---------------------------CCCEEEEEecC-CCHHHHHHHHH
Confidence 001122346666666679999999876521 25899999985 46899999999
Q ss_pred HHHHHHHh
Q 038499 517 ALEFIAIY 524 (609)
Q Consensus 517 al~~v~~~ 524 (609)
.|+.+++.
T Consensus 423 ri~~~l~~ 430 (468)
T PLN02450 423 RLKSFVES 430 (468)
T ss_pred HHHHHHHh
Confidence 99988754
No 182
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=1.6e-20 Score=197.01 Aligned_cols=283 Identities=13% Similarity=-0.037 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
..++++.+++++|.+++ +|++| +|++++|..++..+ ++|+ |++..+.|+.+...++..|
T Consensus 42 ~~~lr~~ia~~~~~~~~-~I~it-~Gs~~~l~~~~~~~----------------~~~~---vv~~~P~y~~y~~~~~~~G 100 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI-KVLIG-PGLTHFIYRLLSYI----------------NVGN---IIIVEPNFNEYKGYAFTHG 100 (332)
T ss_pred HHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHHHHHHHh----------------CCCc---EEEeCCChHHHHHHHHHcC
Confidence 56799999999999987 88887 89999999887643 4655 4444788999888999999
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCccc-
Q 038499 203 AEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVE- 278 (609)
Q Consensus 203 ~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~~- 278 (609)
++++.||++.. .+|.+.++ + .+++++++++|+||||.+.+. ++|+++|++||+++|+|+++.--...
T Consensus 101 ~~v~~vp~~~~-~~~~~~l~----~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 101 IRISALPFNLI-NNNPEILN----N----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred CeEEEEeCCcc-cCcHHHHh----h----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 99999998753 34554443 2 368899999999999999885 55777789999999999996532110
Q ss_pred -ccCCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 279 -IDVRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 279 -id~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
...... ....--+++.|++|.+|-| ..+|++++++++ ++.+..... ..
T Consensus 172 ~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l--i~~l~~~~~---------------------------~~ 222 (332)
T PRK06425 172 AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN--MKISRKITE---------------------------PW 222 (332)
T ss_pred chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHH--HHHHHHcCC---------------------------CC
Confidence 011111 0112346778999999844 459999999887 333211100 00
Q ss_pred ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 356 TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 356 tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
+.+ ....+++... ......+...+..++.++++.+.|+++ ++.+..+. ...++++. .+
T Consensus 223 ~~~--~~~~~~l~~~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~---~g~f~~~~-~~-------------- 280 (332)
T PRK06425 223 SVC--DPAIDFIRSI-DLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDP---SANFITFM-IP-------------- 280 (332)
T ss_pred ccC--HHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC---CceEEEEE-cC--------------
Confidence 001 1111111100 001112455667777888899999887 67765431 23333333 22
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
+..++.+.|.+ .||.+++|..|.++ .++++||+++ +.++.++++
T Consensus 281 -----~~~~~~~~l~~-~gi~v~~~~~f~~~---------------------------~~~~iRis~~---~~~~~~~l~ 324 (332)
T PRK06425 281 -----DAHDFYSYLLK-NGILVRLLDDYECL---------------------------GEQYIRIAIR---RRSFNIKLV 324 (332)
T ss_pred -----CHHHHHHHHHH-CCeEEEECCCCCCC---------------------------CCCEEEEEeC---CHHHHHHHH
Confidence 25678888876 59999988765311 1479999998 899999999
Q ss_pred HHHHHHH
Q 038499 516 EALEFIA 522 (609)
Q Consensus 516 ~al~~v~ 522 (609)
++|++++
T Consensus 325 ~al~~~~ 331 (332)
T PRK06425 325 NALRNFL 331 (332)
T ss_pred HHHHHHh
Confidence 9998764
No 183
>PRK06460 hypothetical protein; Provisional
Probab=99.88 E-value=9.3e-21 Score=201.55 Aligned_cols=312 Identities=16% Similarity=0.089 Sum_probs=192.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+++.......++++.++++.|++. .++|+ +|+ +++..++..+ +++|| .|+++...|...
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~~--~v~~~-sG~-~ai~~~l~al---------------~~~Gd--~Vl~~~~~~~~t 97 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAEM--GVAFS-SGM-GAISTTALAL---------------LKPGN--SVLVHRDMFGRS 97 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCCc--EEEeC-CHH-HHHHHHHHHH---------------hCCCC--EEEEecCCcCcH
Confidence 444445667889999999999964 57775 776 5777776665 47899 577776555332
Q ss_pred ----HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 ----LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ----~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...++..|++++.++.+. .+.+++.++ ++++++++++++||||.+.|+++|+++||++|+++++|+
T Consensus 98 y~~~~~~~~~~G~~v~~~~~~~-----~~~l~~~~~-----~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDe 167 (376)
T PRK06460 98 YRFFTDYLKNWGVNVDASNPGS-----DNIIEKAKS-----KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDA 167 (376)
T ss_pred HHHHHHHHHhhCcEEEEECCCC-----HHHHHHhcC-----CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 234566799999887642 334444444 689999999999999999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
+++.+.. ..++. .+.|+++.|+||+++|+++ .|+++.++++ ++.+....
T Consensus 168 a~~~~~~---~~~l~-~~~divv~S~sK~l~G~~~~~~G~~~~~~~l--~~~l~~~~----------------------- 218 (376)
T PRK06460 168 TFSTPIN---QKPLE-LGADIVVHSASKFLAGHNDVIAGLAAGYGKL--LNVIDQMR----------------------- 218 (376)
T ss_pred CcCcccc---CChhh-cCCCEEEeecceeccCCCCceEEEEecCHHH--HHHHHHHH-----------------------
Confidence 9876532 22221 2679999999999997753 7898888876 22221110
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcce
Q 038499 349 EERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAI 414 (609)
Q Consensus 349 ~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~ 414 (609)
.....+.....+. .+ + ......+...++..++++++.+.|+++|.++ |+-|. + ....+.
T Consensus 219 -~~~g~~~~~~~a~--~~--l--~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~ 291 (376)
T PRK06460 219 -RTLGTSLDPHAAY--LT--L--RGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGV 291 (376)
T ss_pred -HhcCCCCCHHHHH--HH--H--hchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceE
Confidence 0010111111111 11 0 1112245566778888999999999888774 44331 1 124678
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYV 491 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~ 491 (609)
++|.+.. +. -....+.+.| +.+.+.+.-|..-+ .|+......+..+... ..
T Consensus 292 ~s~~~~~-~~---------------~~~~~~~~~l-~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~---------~~ 345 (376)
T PRK06460 292 LSFEVNG-GQ---------------ESALKVMKSL-KLIIPAQTLGGVNSVISHPATMSHRTLSLEERK---------IV 345 (376)
T ss_pred EEEEEcC-cH---------------HHHHHHHHhC-CcceeccCCCCCceEEeCccccccccCCHHHHH---------hc
Confidence 8888764 21 1233444544 33444444442111 1222111122221111 14
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 492 GVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 492 ~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
|+.++.||+|++.- |.+.+++.|+..++
T Consensus 346 gi~~~liR~svGlE----~~~dl~~dl~~al~ 373 (376)
T PRK06460 346 GITDSLLRLSVGIE----DVNDLIEDLDRALS 373 (376)
T ss_pred CCCCCeEEEEeccC----CHHHHHHHHHHHHH
Confidence 56789999999964 45555555555443
No 184
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.88 E-value=5.9e-20 Score=196.59 Aligned_cols=343 Identities=14% Similarity=0.108 Sum_probs=213.7
Q ss_pred HHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHH
Q 038499 91 RYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILRE 170 (609)
Q Consensus 91 ~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (609)
+.+.+++.+.+.++ + +++..+...+.......++++.+++++|.+ +.++|+ +|+++++..+.. +
T Consensus 15 ~~~~~~~~~a~~~~-g-~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e--~al~~~-sG~~a~~~~i~~-l---------- 78 (392)
T PLN03227 15 PTLRQTALESLSHY-G-CGSCGPRGFYGTIDAHLELEQCMAEFLGTE--SAILYS-DGASTTSSTVAA-F---------- 78 (392)
T ss_pred HHHHHHHHHHHHHh-C-CCCcccccccCChHHHHHHHHHHHHHhCCC--cEEEec-CcHHHHHHHHHH-h----------
Confidence 35666677776653 2 222212222334457889999999999986 367786 898887754443 3
Q ss_pred HHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc---------cCCCceEEEEec
Q 038499 171 KLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK---------DAKRPILGSFSA 241 (609)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~---------~~~~~~lv~~s~ 241 (609)
+++|| +|+++...|+++...++..+++++.++.+ |++++++.+.... ..+++++|+++.
T Consensus 79 -----~~~GD--~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 79 -----AKRGD--LLVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred -----CCCCC--EEEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 47999 79999999999988888888888888764 4455554332211 113688999999
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc---------ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE---------IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~---------id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
++|++|.+.|+++|.++|++||+++++|++++.+... .++.+ ..++|++++|.+|.+| |.| |+++.+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p--~~~~Div~~slsk~~g-~~g-g~v~~~ 222 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKP--MVHAEIVTFSLENAFG-SVG-GMTVGS 222 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCC--CCCceEEEeechhhhh-ccC-cEEecC
Confidence 9999999999999999999999999999999855332 11222 1367999999999987 654 788888
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ-MIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+++. +.+... +.+ ..+....+++.. ...+++... ...+.+.++.+++.+++
T Consensus 223 ~~~~--~~~~~~--~~~--------------------~~~~~~~~p~~~~aa~~al~~~----~~~~~~~~~l~~~~~~l 274 (392)
T PLN03227 223 EEVV--DHQRLS--GSG--------------------YCFSASAPPFLAKADATATAGE----LAGPQLLNRLHDSIANL 274 (392)
T ss_pred HHHH--HHHHHh--CcC--------------------ccccCCCCHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 8762 222111 000 011111223222 222222221 11345667788888899
Q ss_pred HHHhCCCCceEEeCCC-------CCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 392 LERLLPNQNIKILGNT-------STKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~-------~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
.+.|++. ++...+.. .....+++.+.+.+ ... . ... ........+++.|.+ .||.++....+.
T Consensus 275 ~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~-~~~-~-----~~~-~~~~~~~~~~~~~~~-~Gi~~~~~~~~~ 344 (392)
T PLN03227 275 YSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSD-QEA-T-----RRT-DETLILDQIAHHSLS-EGVAVVSTGGHV 344 (392)
T ss_pred HHHHHhc-CCccccccccccccCCCCCCCEEEEEeCC-HHH-h-----hhh-hhhhHHHHHHHHHHH-CCCEEEeccccc
Confidence 9988742 22211110 01245666666643 110 0 000 000012467777766 599886321110
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
...+ ..+.+..+|++++..+|+||+++++++|+++++..
T Consensus 345 ---~~~~-------------------~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 345 ---KKFL-------------------QLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred ---CCcC-------------------CCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 0000 01135789999999999999999999999998764
No 185
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.88 E-value=1e-20 Score=201.29 Aligned_cols=311 Identities=19% Similarity=0.212 Sum_probs=200.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+++.......++++.++++.|.+ +.+ ++++|+ +|+..++..+ +++|| .|+++...|++.
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~--~a~-~~~sG~-~Ai~~~l~~l---------------~~~gd--~Vl~~~~~y~~~ 92 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGE--AAL-AFSSGM-AAISTVLLAL---------------LKAGD--HVVASDDLYGGT 92 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCC--CEE-EEcCHH-HHHHHHHHHH---------------cCCCC--EEEECCCCcchH
Confidence 33334566788999999999974 244 445776 5677776665 37888 699999999887
Q ss_pred HHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...+ +..|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|+++||+||+++++|+
T Consensus 93 ~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~ 162 (369)
T cd00614 93 YRLFERLLPKLGIEVTFVDPD-----DPEALEAAIK-----PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDN 162 (369)
T ss_pred HHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 6544 3568899988765 6899999997 579999999999999999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec-hhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
+++.+...-.+ . .++|+++.|++|+++|++. .|+++.++ ++ ++.+....
T Consensus 163 t~~~~~~~~~~-~---~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l--~~~l~~~~---------------------- 214 (369)
T cd00614 163 TFATPYLQRPL-E---LGADIVVHSATKYIGGHSDVIAGVVVGSGEAL--IQRLRFLR---------------------- 214 (369)
T ss_pred CCcchhcCChh-h---hCCcEEEeccceeccCCCCceEEEEEeCcHHH--HHHHHHHH----------------------
Confidence 98877542111 1 2789999999999998753 68898877 55 22221110
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC-------------CCCCcc
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT-------------STKRQA 413 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~-------------~~~r~~ 413 (609)
+...++.+.... .+++. .....+...++..++++++.+.|+++|++. +.-|. .....+
T Consensus 215 ---~~~g~~~~p~~a-~~~l~----~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~ 286 (369)
T cd00614 215 ---LALGTILSPFDA-WLLLR----GLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGG 286 (369)
T ss_pred ---HhhCCCCCHHHH-HHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCce
Confidence 000111111111 11111 112344556777888999999999988764 33331 012467
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGY 490 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~ 490 (609)
+++|.+.+ +. .....+.+.| +.+.+.+.-|...+ .|.......+.++.. ..
T Consensus 287 i~s~~l~~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~---------~~ 340 (369)
T cd00614 287 VFSFELKG-GL---------------EAAKKFLNAL-KLFSLAVSLGGVESLVEHPASMTHSQLPPEER---------AA 340 (369)
T ss_pred EEEEEeCC-CH---------------HHHHHHHHcC-CcceEcccCCCCceeeeCCcccccccCCHHHH---------Hh
Confidence 88888864 11 1233444444 34444444443222 111111111211111 02
Q ss_pred CCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 491 VGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 491 ~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.|+.++.||+|++. |+++.+++.|+..+
T Consensus 341 ~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 341 AGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 35668999999996 56777777766543
No 186
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.1e-20 Score=201.98 Aligned_cols=303 Identities=18% Similarity=0.171 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.++++.|.+. .++++ +|+ +++..++..+ +++|| .|+++.+.|.+....+..
T Consensus 61 p~~~~Le~~lA~~~g~~~--~i~~~-sG~-~Ai~~~l~al---------------l~~Gd--~Vl~~~~~y~~t~~~~~~ 119 (388)
T PRK07811 61 PTRTALEEQLAALEGGAY--GRAFS-SGM-AATDCLLRAV---------------LRPGD--HIVIPNDAYGGTFRLIDK 119 (388)
T ss_pred ccHHHHHHHHHHHhCCCc--eEEeC-CHH-HHHHHHHHHH---------------hCCCC--EEEEcCCCchHHHHHHHH
Confidence 346789999999999874 46664 775 6788887766 47899 699999999876655443
Q ss_pred ----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.|++++.++. .|+++|+++++ +++++|++++++||||.+.|+++|+++||++|+++|+|++++.++
T Consensus 120 ~~~~~gi~~~~~d~-----~d~e~l~~~i~-----~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~ 189 (388)
T PRK07811 120 VFTRWGVEYTPVDL-----SDLDAVRAAIT-----PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPY 189 (388)
T ss_pred hCcCCCeEEEEeCC-----CCHHHHHHhcC-----cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 5788887765 38999999998 689999999999999999999999999999999999999988775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|++++|++|+++||++ .|+++++++.. ...+....... .
T Consensus 190 ~~~p~~----~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l-~~~~~~~~~~~-------------------------g 239 (388)
T PRK07811 190 LQQPLA----LGADVVVHSTTKYIGGHSDVVGGALVTNDEEL-DEAFAFLQNGA-------------------------G 239 (388)
T ss_pred cCCchh----hCCcEEEecCceeecCCCCcEEEEEEECCHHH-HHHHHHHHHhc-------------------------C
Confidence 433332 2789999999999998865 58888865431 11221110000 0
Q ss_pred CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEEec
Q 038499 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFNIH 420 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~~~ 420 (609)
.+.+... +.+... ...-.+...++..+++..+.+.|+++|++. |+-|.- ....++++|.+.
T Consensus 240 ~~~s~~~---a~l~~~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 240 AVPGPFD---AYLTLR--GLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred CCCCHHH---HHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 1111111 111111 112244555667778899999999999875 444421 113568888886
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. +. -....+.+.| +.+.+.+.-|...+ .|.......+..+ ..|+.++.
T Consensus 315 ~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~------------~~gi~~~l 365 (388)
T PRK07811 315 G-GE---------------EAARDFCART-KVFTLAESLGGVESLIEHPSAMTHASTAGS------------QLEVPDDL 365 (388)
T ss_pred C-CH---------------HHHHHHHHhC-CcceeeccCCCCcceEeCCcccCcccCCHh------------hcCCCCCE
Confidence 4 21 1233455555 44555555554322 1111111111100 12667899
Q ss_pred EEEecCCCCCHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al 518 (609)
||||++.-..++=++.+.++|
T Consensus 366 iR~svGlE~~~dl~~dl~~al 386 (388)
T PRK07811 366 VRLSVGIEDVADLLADLEQAL 386 (388)
T ss_pred EEEEeCCCCHHHHHHHHHHHh
Confidence 999999754433344444443
No 187
>PLN02509 cystathionine beta-lyase
Probab=99.88 E-value=1.3e-20 Score=203.67 Aligned_cols=306 Identities=15% Similarity=0.171 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
...++++++++++.|.+ +.++++ +|+ +++..++.. +++|| +|+++...|+++...+
T Consensus 133 pt~~aLE~~lA~leg~e--~ai~~~-SG~-aAi~~il~l----------------l~~GD--~VI~~~~~y~~t~~ll~~ 190 (464)
T PLN02509 133 PTRDALESLLAKLDKAD--RAFCFT-SGM-AALSAVTHL----------------IKNGE--EIVAGDDVYGGSDRLLSQ 190 (464)
T ss_pred HHHHHHHHHHHHHhCCC--EEEEeC-cHH-HHHHHHHHH----------------hCCCC--EEEEcCCchhhHHHHHHH
Confidence 45788999999999864 245554 665 567665543 37899 6999999998876444
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
...|++++.++. .|+++++++++ +++++|++++++||||.+.|+++|+++||+||+++++|+|++.|+
T Consensus 191 ~l~~~G~~v~~vd~-----~d~e~l~~ai~-----~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 191 VVPRSGVVVKRVNT-----TNLDEVAAAIG-----PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HHHHCCeEEEEeCC-----CCHHHHHHhCC-----cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 356999988864 37899999997 689999999999999999999999999999999999999998876
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|++++|++||++|+++ .|+++++++.. ...+... +...
T Consensus 261 ~~~pl~----~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l-~~~~~~~--------------------------~~~~ 309 (464)
T PLN02509 261 LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKL-AKEVYFL--------------------------QNSE 309 (464)
T ss_pred cCChhh----cCCcEEEecCcccccCCCccceeEEEeccHHH-HHHHHHH--------------------------HHhc
Confidence 543332 2789999999999999876 68888765541 1111000 0001
Q ss_pred CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEec
Q 038499 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNIH 420 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~~ 420 (609)
|+. +... .+.+.. ....-.+...++.++.++++.+.|+++|.++ |+-|. + ....+.++|.+
T Consensus 310 g~~-l~p~-~A~l~l--r~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~- 384 (464)
T PLN02509 310 GSG-LAPF-DCWLCL--RGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT- 384 (464)
T ss_pred CCC-cCHH-HHHHHH--hhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-
Confidence 110 0000 111111 1112345566778888999999999999884 55442 1 12356888877
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. +. -....+++.| +.+.+.+.-|...+ .|.......+..+... ..|+.++.
T Consensus 385 ~-~~---------------~~~~~f~~~l-~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~---------~~Gi~~~l 438 (464)
T PLN02509 385 G-SV---------------ALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVRE---------ARGLTEDL 438 (464)
T ss_pred C-CH---------------HHHHHHHHcC-CcceEcccCCCCCceeeCCcccccccCCHHHHH---------hcCCCCCe
Confidence 4 21 1234555655 45666666664322 1221111222222111 24667899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
||||+|. |+++.+++-|+..++.
T Consensus 439 iRlSvGl----E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 439 VRISAGI----EDVDDLISDLDIAFRT 461 (464)
T ss_pred EEEEecc----CCHHHHHHHHHHHHcc
Confidence 9999996 4566666666665544
No 188
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=4.8e-20 Score=195.44 Aligned_cols=319 Identities=14% Similarity=0.047 Sum_probs=206.3
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.++.|+.+... ..++.+.+++.+.+......+.. ...++|+.++++++.+++ +|++| +|++++|..
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----------~~~~lr~~ia~~~~~~~~-~I~it-~G~~~al~~ 97 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKA-----------SHADLTAALADRWDVSPE-QVWLA-NGGDGALDY 97 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHHH
Confidence 35556554332 34456777777655322111111 145788999999999887 89988 899999999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~ 233 (609)
+++++ +++|| .|+++.+.|+.+....+..|++++.++++. +..++++++++++. +
T Consensus 98 ~~~~~---------------~~~gd--~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~------~ 154 (357)
T PRK14809 98 LARAM---------------LDPGD--TVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD------G 154 (357)
T ss_pred HHHHh---------------cCCCC--EEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc------C
Confidence 88876 37898 699998888877767777899999998864 34677777776543 5
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcccccC-CCCCCCCccEEEEcCCCCCCCC-CCcEEE
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVEIDV-RSGQTDGYDAIFLSTHKFLGGP-GSPGIL 309 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~~id~-~~~~~~~~D~v~~S~hK~lggp-~g~G~L 309 (609)
++++++++++||||.+.+.+++.++++.. ++++|+|+++..-...... ........-+++.|++|.+|.| ..+|++
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 234 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYA 234 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheee
Confidence 78999999999999999988877777654 7899999997632111010 0010112346778999999844 359999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++++++ ++.+.... ...+.+.+.+ .+++..+ .+....+...+..++.++
T Consensus 235 ~~~~~~--~~~~~~~~--------------------------~~~~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~r~ 283 (357)
T PRK14809 235 VVPEEW--ADAYARVN--------------------------TPFAASELAC--RAGLAAL-DDDEHVERTVETARWARE 283 (357)
T ss_pred ecCHHH--HHHHHHhC--------------------------CCCCCCHHHH--HHHHHHh-CCHHHHHHHHHHHHHHHH
Confidence 999887 33331110 0011222222 2222222 122223445555666677
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|... .+ + +. +.+.+...+ +..++++.|. +.||.+++|..|.
T Consensus 284 ~l~~~L~~~----~~-~---~~-g~f~~~~~~-------------------~~~~~~~~l~-~~gv~v~~g~~f~----- 329 (357)
T PRK14809 284 YIREELDAP----TW-E---SA-GNFVLAEVG-------------------DASAVAEAAQ-ERGVIVRDCTSFG----- 329 (357)
T ss_pred HHHHHhcCc----cC-C---CC-CCEEEEECC-------------------CHHHHHHHHH-HCCEEEEECccCC-----
Confidence 777777542 12 1 12 333333222 2467788875 4699999887553
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +.++++.++++|+.+++
T Consensus 330 ------------------------~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 330 ------------------------LPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ------------------------CCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 1479999986 68999999999988754
No 189
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=5.4e-20 Score=198.13 Aligned_cols=328 Identities=19% Similarity=0.164 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
....++++.++++.|++. . +++++|+. |+..++..+ +++|| .|+++...|.+....+
T Consensus 69 p~~~~Le~~lA~l~g~~~--a-v~~sSG~a-Ai~~al~al---------------l~~Gd--~Vv~~~~~y~~t~~~~~~ 127 (436)
T PRK07812 69 PTQDVVEQRIAALEGGVA--A-LLLASGQA-AETFAILNL---------------AGAGD--HIVSSPRLYGGTYNLFHY 127 (436)
T ss_pred chHHHHHHHHHHHhCCCe--E-EEEccHHH-HHHHHHHHH---------------hCCCC--EEEEeCCcchHHHHHHHH
Confidence 446689999999999863 3 44458877 566665554 47898 6888888888766543
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
...|++++.++ +. .|+++++++++ +++++|++++++||+|.+.|+++|+++||+||+++++|++++.|.
T Consensus 128 ~l~~~Gi~v~~vd-d~---~d~e~l~~ai~-----~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~ 198 (436)
T PRK07812 128 TLPKLGIEVSFVE-DP---DDLDAWRAAVR-----PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPY 198 (436)
T ss_pred HhhcCeEEEEEEC-CC---CCHHHHHHhCC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 33688888885 22 28999999988 689999999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEechhhccCCCCCCccCCCceEeecccccccccccc---------
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLE--------- 346 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~--------- 346 (609)
....+. .++|+++.|+||++||+++ +|.+++....+..... .... + ...+..|..
T Consensus 199 ~~~pl~----~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~--~~~~-----~----~~~~~~~~~~~~~~~~~~ 263 (436)
T PRK07812 199 LIRPLE----HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQG--RFPG-----F----TTPDPSYHGVVFAELGPP 263 (436)
T ss_pred cCCchh----cCCCEEEEecccccCCCCCeEEEEEEcCCccccccc--cccc-----c----ccCCcccccchhhhcchh
Confidence 543332 2899999999999998754 6666664332111111 0000 0 000111110
Q ss_pred ----cc--cccccCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C--------
Q 038499 347 ----DI--EERESGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-------- 408 (609)
Q Consensus 347 ----~~--~~r~~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-------- 408 (609)
.. ..+...|. .+-. .+. +.+.....++...++..+.+..+.+.|+++|.++ |+-|. +
T Consensus 264 ~~~~~~~~~~~~~~G~~l~p~---~a~--l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 338 (436)
T PRK07812 264 AYALKARVQLLRDLGSAISPF---NAF--LIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAK 338 (436)
T ss_pred HHHHHHHHHHHHhcCCCCCHH---HHH--HHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 00 00001111 1111 111 1111223456667778888999999999999874 44441 1
Q ss_pred ----CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHH
Q 038499 409 ----TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 409 ----~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~ 481 (609)
....++++|.+.. +. .....+.+.| +.+.+.+.-|...+ .|.......+..+...
T Consensus 339 ~~~~~g~gg~~sf~l~~-~~---------------~~~~~f~~~l-~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~- 400 (436)
T PRK07812 339 RLAPKGTGAVLSFELAG-GV---------------EAGKAFVNAL-TLHSHVANIGDVRSLVIHPASTTHSQLTPEEQL- 400 (436)
T ss_pred HhCcCCCceEEEEEecC-CH---------------HHHHHHHHhC-CcceEecccCCCcceeeCCCCCCcccCCHHHHH-
Confidence 1135688888864 21 1234555555 45555554443222 1221111122222211
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccc
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRF 528 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~ 528 (609)
..|+.++.||||++. |+.+.+++-|+..++...+|
T Consensus 401 --------~~gi~~~liRlSvGl----Ed~~dli~dl~~Al~~~~~~ 435 (436)
T PRK07812 401 --------ATGVTPGLVRLAVGI----EGIDDILADLEAGFAAAKAF 435 (436)
T ss_pred --------hcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhhcc
Confidence 246778999999996 45666666666666554443
No 190
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=5.8e-20 Score=195.37 Aligned_cols=333 Identities=14% Similarity=0.080 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
...+++++++++++|.+ ++++| +|+++++..++.+++ ++||| +|++++++|+++..++..
T Consensus 31 ~~~~~~e~~la~~~g~~---~~v~~-~sgt~aL~~~l~al~--------------~~pGd--~Viv~~~t~~~~~~~~~~ 90 (376)
T TIGR02379 31 PFSRRCETWLENRTGTK---KALLT-PSCTAALEMAALLLD--------------IQPGD--EVIMPSYTFVSTANAFVL 90 (376)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHcC--------------CCCcC--EEEECCCCcHHHHHHHHH
Confidence 35678889999998874 68888 566778888877765 57899 799999999999999999
Q ss_pred cCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 201 SLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 201 ~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.|++++.++++++ +.+|+++++++++ +++++|+ ++|++|...|+++|.++|++||+++|+|++|+.+.. .
T Consensus 91 ~G~~~v~vd~d~~~~~~d~~~le~~i~-----~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~ 161 (376)
T TIGR02379 91 RGAKIVFVDIRPDTMNIDETLIESAIT-----HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST-Y 161 (376)
T ss_pred cCCEEEEEecCCCcCCCCHHHHHHhcC-----cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-c
Confidence 9999999999875 5799999999998 6889875 556899999999999999999999999999988754 2
Q ss_pred cCCCCCCCCccEEEEcCCC--CCC-CCCCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 280 DVRSGQTDGYDAIFLSTHK--FLG-GPGSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK--~lg-gp~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
+-++... -.|+.++|+|+ .+. |+. .|+++++ +++ .+++.+....|....... +. ....| .-...|
T Consensus 162 ~~~~~g~-~~~~~~fSf~~~K~l~~g~~-gG~v~~~~~~~--~~~~~~~~~~g~~~~~~~-~~-~~~~~-----~~~~~g 230 (376)
T TIGR02379 162 KGRALGS-IGHLGTFSFHETKNYTSGGE-GGALLINDQAF--IERAEIIREKGTNRSQFF-RG-EVDKY-----TWRDIG 230 (376)
T ss_pred CCcccCC-CCCEEEEeCCCCCcCcccCC-ceEEEECCHHH--HHHHHHHHHhCCCCcccc-cc-CCCcc-----eeeeec
Confidence 3333211 22777787764 444 334 4777776 444 334444333222100000 00 00000 000112
Q ss_pred ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC--c-eEEeCCCCCCCcceEEEEeccCCCCCcCCCCC
Q 038499 356 TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ--N-IKILGNTSTKRQAILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 356 tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p--~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~ 432 (609)
...-+.-+.|++-.. +....+.+.++.++.++++.+.|+.++ + +.+....+.....+..|.+.-...
T Consensus 231 ~n~~~~~~~Aa~g~~--qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------- 300 (376)
T TIGR02379 231 SSYLPSELQAAYLWA--QLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-------- 300 (376)
T ss_pred ccCCccHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc--------
Confidence 211111122222211 222356677777888888889987764 2 333221111122222232221010
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccCC--hhhhhhc--CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACAG--PYGHHLL--DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSN 508 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~--p~~~~ll--~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ 508 (609)
.+.+++.+.|.+ .||.++.+..... |+...+. .-+.+.++++ ....+.|.++..+|+
T Consensus 301 -------~~r~~l~~~L~~-~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~-----------~~~~l~LP~~~~l~~ 361 (376)
T TIGR02379 301 -------DDRNELIKYLKE-QEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKE-----------SERLVRLPLYYGLSK 361 (376)
T ss_pred -------CCHHHHHHHHHH-CCCCccccCcCCCcchhHHhhCCCCCCChHHHHH-----------HhceEEccCCCCCCH
Confidence 357889999966 5999885432111 1100010 1112333332 247899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 038499 509 EEFEFTLEALEFIA 522 (609)
Q Consensus 509 eeid~ll~al~~v~ 522 (609)
+|+++++++|+.+.
T Consensus 362 ~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 362 EDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 191
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=1.1e-20 Score=202.07 Aligned_cols=306 Identities=16% Similarity=0.139 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
....++++.+++++|++. . +++++|+. ++..++..+ +++|| .|+++...|.+....+
T Consensus 59 p~~~~le~~lA~l~g~~~--a-v~~~sG~~-Ai~~~l~al---------------~~~Gd--~Vi~~~~~y~~t~~~~~~ 117 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEA--A-VATSSGMG-AIAATLLTI---------------LKAGD--HLISDECLYGCTFALLEH 117 (391)
T ss_pred chHHHHHHHHHHHhCCCc--E-EEECCHHH-HHHHHHHHH---------------hCCCC--EEEEecCcchHHHHHHHH
Confidence 346789999999999863 3 45557875 566665554 47888 6888888887655443
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
...|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|++++.+.
T Consensus 118 ~~~~~G~~~~~vd~~-----d~e~l~~~i~-----~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~ 187 (391)
T TIGR01328 118 ALTKFGIQVDFINMA-----IPEEVKAHIK-----DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPM 187 (391)
T ss_pred HHhcCCeEEEEECCC-----CHHHHHHhhc-----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhc
Confidence 4479999999875 7999999997 689999999999999999999999999999999999999998765
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|++++|++|++||++. .|+++.++++ ++.+... ..+...
T Consensus 188 ~~~~~~----~g~Divv~S~sK~lgg~g~~~gG~v~~~~~l--i~~l~~~------------------------~~~~~~ 237 (391)
T TIGR01328 188 LTNPVA----LGVDVVVHSATKYIGGHGDVVAGLICGKAEL--LQQIRMV------------------------GIKDMT 237 (391)
T ss_pred cCCchh----cCCCEEEccccccccCCCCceEEEEEcCHHH--HHHHHHH------------------------HHHhCC
Confidence 433322 2789999999999998875 5888888776 2222110 000011
Q ss_pred C-C-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEE
Q 038499 355 G-T-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFN 418 (609)
Q Consensus 355 g-t-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~ 418 (609)
| . .++.+ .+... .........++.+++++++.+.|+++|+++ ++-|.- ....++++|.
T Consensus 238 g~~l~~~~a----~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~ 311 (391)
T TIGR01328 238 GSVISPFDA----WLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFE 311 (391)
T ss_pred CCCCCcHHH----HHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEE
Confidence 1 1 11111 11111 112344556677788999999999998875 333321 1135688888
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
+.+ +. -....+.+.| +.+.+.+.-|...+ .|.......+.++... ..|+.+
T Consensus 312 ~~~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~ 365 (391)
T TIGR01328 312 LKG-GF---------------AGAKKLLNNL-KLIRLAVSLGDAETLIQHPASMTHAVVPKEERE---------AAGITD 365 (391)
T ss_pred eCC-CH---------------HHHHHHHHhC-CcceEecCCCCCcccCcCCCccccccCCHHHHH---------hcCCCC
Confidence 764 21 1133455555 44555555554322 1211111122221111 245668
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+.||||++. |+.+.+++-|+..++
T Consensus 366 ~liR~svGl----E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 366 GMIRLSVGL----EDADDLIADLKQALD 389 (391)
T ss_pred CeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 999999996 445555555555543
No 192
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=6e-20 Score=199.41 Aligned_cols=354 Identities=15% Similarity=0.117 Sum_probs=223.5
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcC-Ccc-----CCCCCCchhhHHHHHHHHHHHHHHHHHh----C----CCCCCcE
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLP-FYG-----NTHTCDSYVGQHTTNMVHEASNYIKKCL----G----GGQEDAM 142 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~-~~~-----n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g----~~~~~~v 142 (609)
.+|-|..+.+..+...+++.+.+.... .+. ..+...++.. .....++|+.+++++ | .+++ +|
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---~~G~~~LR~aiA~~l~~~~~~~~~v~p~-~I 123 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQD---YHGLKSFRQAMASFMEQIRGGKARFDPD-RI 123 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCC---CcchHHHHHHHHHHHHHhcCCCCCcCHH-He
Confidence 478888888888888888888775431 000 1111011110 112344555555554 3 4554 89
Q ss_pred EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcCceEEEEecCC--CCCCCHH
Q 038499 143 IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSLAEVVEIGLDD--DGLLDIE 219 (609)
Q Consensus 143 ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~g~ld~e 219 (609)
++| +|+++++..++..+. .||| .|+++.+.|+.+...++ ..|++++.|+.+. ++.+|++
T Consensus 124 vit-~G~t~al~~l~~~l~---------------~pGD--~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~ 185 (447)
T PLN02607 124 VLT-AGATAANELLTFILA---------------DPGD--ALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQ 185 (447)
T ss_pred EEc-CChHHHHHHHHHHhC---------------CCCC--EEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHH
Confidence 988 899999999887763 7899 69999999998877776 4799999999874 3468999
Q ss_pred HHHHHHhhhcc-CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCC----CC--
Q 038499 220 ALRSKLELYKD-AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRS----GQ-- 285 (609)
Q Consensus 220 ~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~----~~-- 285 (609)
++++++++... ..++|++++++|+||||.+.+ +++|.++|++||+++|+|++++.... ...+.. ..
T Consensus 186 ~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~ 265 (447)
T PLN02607 186 ALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYK 265 (447)
T ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCC
Confidence 99999874211 137889999999999999988 56788899999999999999764211 111110 00
Q ss_pred -CCCccEEEEcCCCCCCCCC-CcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH
Q 038499 286 -TDGYDAIFLSTHKFLGGPG-SPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362 (609)
Q Consensus 286 -~~~~D~v~~S~hK~lggp~-g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~ 362 (609)
....-.++.|++|.+|.|+ .+|+++.. +.+. ..+... ..+ .+.+.+.+.
T Consensus 266 ~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~--~~~~~~-------------------------~~~-~~~s~~~q~ 317 (447)
T PLN02607 266 GVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV--TTARRM-------------------------SSF-TLVSSQTQH 317 (447)
T ss_pred CCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH--HHHHHH-------------------------hhc-CCCCHHHHH
Confidence 0122366789999998553 59999984 4441 111100 000 112233332
Q ss_pred HHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 363 IRAALAFWVKEYI----GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 363 ~~aal~~~~~~~~----g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
+.+ -.+.+.. ..+..+++..+.++.+.+.|++. ++.+..+ ..+.|.|.-.+ .... ...
T Consensus 318 ~~~---~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~----~ag~fvw~~L~-~~~~---------~~~ 379 (447)
T PLN02607 318 LLA---SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKG----NAGLFCWMNLS-PLLE---------TPT 379 (447)
T ss_pred HHH---HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccC----CeeEEEEEEch-Hhhc---------CCC
Confidence 221 1122211 12344556666677788888876 6665543 34566665544 1100 000
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
......+.+.|.++.||.+.+|..|... .+||+||+|.. .++++++..++.|
T Consensus 380 ~~~e~~l~~~ll~~~gV~v~pG~~f~~~---------------------------~~g~fRi~fa~-~~~~~l~~gl~Ri 431 (447)
T PLN02607 380 REGELALWDSILREVKLNISPGSSCHCS---------------------------EPGWFRVCFAN-MSEDTLEVALKRI 431 (447)
T ss_pred chhHHHHHHHHHHhCCEEEcCccccCCC---------------------------CCCEEEEEecc-CCHHHHHHHHHHH
Confidence 0112356666666679999999876521 26999999974 4689999999999
Q ss_pred HHHHHhcc
Q 038499 519 EFIAIYGQ 526 (609)
Q Consensus 519 ~~v~~~~~ 526 (609)
..+++.-.
T Consensus 432 ~~~l~~~~ 439 (447)
T PLN02607 432 HRFMDRRK 439 (447)
T ss_pred HHHHHHHH
Confidence 98886543
No 193
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.87 E-value=2.9e-20 Score=199.40 Aligned_cols=309 Identities=17% Similarity=0.187 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW--- 198 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--- 198 (609)
...++++.++++.|.+ .++++++|+. ++..++..+ +++|| .|+++++.|++....+
T Consensus 65 ~~~~Le~~iA~~~g~~---~~l~~~sG~~-Ai~~al~~l---------------l~~Gd--~Vl~~~~~y~~~~~~~~~~ 123 (400)
T PRK06234 65 TSTEVENKLALLEGGE---AAVVAASGMG-AISSSLWSA---------------LKAGD--HVVASDTLYGCTFALLNHG 123 (400)
T ss_pred cHHHHHHHHHHHhCCC---cEEEEcCHHH-HHHHHHHHH---------------hCCCC--EEEEecCccchHHHHHHHH
Confidence 3678999999999974 3455557776 566555444 47899 6888888888766543
Q ss_pred -HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCC
Q 038499 199 -RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGP 275 (609)
Q Consensus 199 -~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~ 275 (609)
+..|++++.++.+ |+++++++++ ++++++++++++||||.+.|+++|+++||++ |+++++|++++.+
T Consensus 124 ~~~~G~~v~~vd~~-----d~e~l~~~i~-----~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~ 193 (400)
T PRK06234 124 LTRYGVEVTFVDTS-----NLEEVRNALK-----ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTP 193 (400)
T ss_pred HhhCCeEEEEECCC-----CHHHHHHHhc-----cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCch
Confidence 5579999999764 8999999998 6899999999999999999999999999997 9999999998877
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.....+. .+.|+++.|++|+++|++. .|+++.++++ ++.+... +. .....
T Consensus 194 ~~~~~l~----~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~--~~~l~~~--~~--------------------~~~~g 245 (400)
T PRK06234 194 YIQRPLQ----LGADVVVHSATKYLNGHGDVIAGFVVGKEEF--INQVKLF--GI--------------------KDMTG 245 (400)
T ss_pred hcCCchh----hCCcEEEeeccccccCCCCceeEEEEecHHH--HHHHHHH--HH--------------------HHhcC
Confidence 5432221 2789999999999998763 5999998877 2222110 00 00000
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEe
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNI 419 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~ 419 (609)
...++... .+.. ....-.+...++..+++.++.+.|+++|.+. |+-|. + ....++++|.+
T Consensus 246 ~~l~p~~a----~l~~--~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l 319 (400)
T PRK06234 246 SVIGPFEA----FLII--RGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFEL 319 (400)
T ss_pred CCCCHHHH----HHHH--hccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEe
Confidence 11111111 1111 1112344556667788888999999888773 44432 1 12355778887
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.. +. -....+.+.| +.+++.+.-|...+ .|.......+.++... ..|+.++
T Consensus 320 ~~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~ 373 (400)
T PRK06234 320 KG-GV---------------EEGKVVMNNV-KLATLAVSLGDAETLIQHPASMTHSPYTAEERK---------EAGISDG 373 (400)
T ss_pred cC-cH---------------HHHHHHHHhC-CcceEeccCCCCCceecCCccCCCCCCCHHHHH---------hcCCCCC
Confidence 64 21 1245677777 56788777775433 1322111122221111 1466789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.||||++.-..++=++.+.++|+.+
T Consensus 374 l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 374 LVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999765555555555555543
No 194
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=1.5e-20 Score=201.72 Aligned_cols=312 Identities=18% Similarity=0.181 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (609)
....++++.+++++|++. .|++ +||+. ++..++..+ +++|| .|+++...|......
T Consensus 65 p~~~~le~~lA~l~g~~~--~i~~-~sG~~-Al~~~l~~l---------------l~~Gd--~Viv~~~~y~~t~~~~~~ 123 (403)
T PRK07503 65 PTLALLEQRMASLEGGEA--AVAL-ASGMG-AITATLWTL---------------LRPGD--EVIVDQTLYGCTFAFLHH 123 (403)
T ss_pred chHHHHHHHHHHHhCCCc--EEEE-cCHHH-HHHHHHHHH---------------cCCCC--EEEEccCccchHHHHHHH
Confidence 446789999999999863 4555 47776 577766554 47899 688888877654432
Q ss_pred -HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 198 -WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 198 -~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
++..|++++.++.+ |+++|+++++ ++|++|++++++||||.+.|+++|+++||++|+++++|++++.++
T Consensus 124 ~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~ 193 (403)
T PRK07503 124 GLGEFGVTVRHVDLT-----DPAALKAAIS-----DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPY 193 (403)
T ss_pred HHhhCCEEEEEeCCC-----CHHHHHHhcC-----ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 34579999998864 7999999998 689999999999999999999999999999999999999998765
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|+++.|++|+++|+++ .|+++.++++. ++++.... ......
T Consensus 194 ~~~~l~----~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~--~~l~~~~~----------------------~~~~g~ 245 (403)
T PRK07503 194 LQRPLE----LGADLVVHSATKYLGGHGDITAGLVVGGKALA--DRIRLEGL----------------------KDMTGA 245 (403)
T ss_pred cCCchh----hCCCEEEccccccccCCCceeEEEEEcCHHHH--HHHHhhhH----------------------HhCcCC
Confidence 433332 2789999999999998764 68888777662 22211000 000001
Q ss_pred CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEEec
Q 038499 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFNIH 420 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~~~ 420 (609)
...++.+ ++... ...-.+...++..+++..+.+.|+++|.++ +.-|.- ..+.++++|.+.
T Consensus 246 ~~s~~~a----~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~ 319 (403)
T PRK07503 246 VMSPFDA----FLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELK 319 (403)
T ss_pred CCCHHHH----HHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEC
Confidence 1112211 11111 111233444556678888889999888765 333311 114567888875
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. +. .....+...| +.+.+.+.-|...+ .|.......+.++.. ...|+.++.
T Consensus 320 ~-~~---------------~~~~~~~~~l-~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~---------~~~gi~~~l 373 (403)
T PRK07503 320 G-GI---------------AAGRRFMNAL-QLFARAVSLGDAESLAQHPASMTHSTYTPEER---------AEHGISEGL 373 (403)
T ss_pred C-CH---------------HHHHHHHHhC-CcceeecccCCCCccCcCCCCCccccCCHHHH---------HhcCCCCCe
Confidence 4 21 0122333333 23333322222111 111111111221111 124677899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
||||+|.-..++=++.+.++|+.+..
T Consensus 374 iR~svGlE~~~dl~~dl~~Al~~~~~ 399 (403)
T PRK07503 374 VRLSVGLEDVADILADLAQALDACAV 399 (403)
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999987666666666666665543
No 195
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.6e-20 Score=200.16 Aligned_cols=305 Identities=18% Similarity=0.124 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR 199 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (609)
.....++++.+++++|.+ +.+++ ++|+. |+..++..+ +++|| .|+++...|+++...++
T Consensus 52 np~~~~lE~~lA~l~g~~--~~l~~-~sG~~-Ai~~~l~~l---------------l~~GD--~Vlv~~~~y~~~~~~~~ 110 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGV--DALAF-NSGMA-AISTLFFSL---------------LKAGD--RVVLPMEAYGTTLRLLK 110 (385)
T ss_pred CccHHHHHHHHHHHhCCC--cEEEe-CCHHH-HHHHHHHHH---------------hCCCC--EEEEcCCCchhHHHHHH
Confidence 345678999999999975 24444 46665 566665544 47899 79999999998876663
Q ss_pred ---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 200 ---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 200 ---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
..|++++.+. +|++++++++++ .++++|++++++||||.+.|+++|+++||++|+++++|++++.|.
T Consensus 111 ~~~~~g~~v~~~~------~d~~~l~~~i~~----~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~ 180 (385)
T PRK08574 111 SLEKFGVKVVLAY------PSTEDIIEAIKE----GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPL 180 (385)
T ss_pred HhhccCcEEEEEC------CCHHHHHHhcCc----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 4588887764 368999999872 289999999999999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
..-.+. .++|++++|+||+++||+. .|+++++ +++ .+.+... .+..
T Consensus 181 ~~~~l~----~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~--~~~~~~~-------------------------~~~~ 229 (385)
T PRK08574 181 LYRPLR----HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEF--LEELWEW-------------------------RRRL 229 (385)
T ss_pred cCChhh----hCCcEEEeeCceeecCCCCceeEEEEECcHHH--HHHHHHH-------------------------HHhc
Confidence 432221 2789999999999998864 3756664 444 1221100 0000
Q ss_pred CCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC--C-------------CCcceEE
Q 038499 354 GGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS--T-------------KRQAILS 416 (609)
Q Consensus 354 ~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~--~-------------~r~~~~~ 416 (609)
... .++.+ .+... ...-.+...++..+++.++.+.|+++|.++ |+-|.- . ...+.++
T Consensus 230 g~~~~p~~a----~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s 303 (385)
T PRK08574 230 GTIMQPFEA----YLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVS 303 (385)
T ss_pred CCCCCHHHH----HHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEE
Confidence 111 11111 11111 112244455666778888899999888774 544421 1 1355778
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
|.+.. +. -....+.+.| +.+.+.+.-|...+ .|+......+.++... ..|+
T Consensus 304 ~~l~~-~~---------------~~~~~~~~~l-~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi 357 (385)
T PRK08574 304 FRVKG-GR---------------DAVLKFLRSL-KLIKPSPSLGGVESLATYPVKSAASPIPEEDRK---------ALGI 357 (385)
T ss_pred EEeCC-CH---------------HHHHHHHHcC-CcceEccCCCCCcceeeCCCcCCcccCCHHHHH---------hcCC
Confidence 87754 11 1234455555 45555555554322 1222111122222111 1466
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al 518 (609)
.++.||||++.-..++=++.+.++|
T Consensus 358 ~~~liR~svGlE~~~dli~dl~~al 382 (385)
T PRK08574 358 TEDLVRLSVGLEDVEDLIEDLDQAL 382 (385)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHH
Confidence 7899999999754333344444443
No 196
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=2.9e-20 Score=200.28 Aligned_cols=165 Identities=18% Similarity=0.114 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
++......+++++.++++.|++ +.|+|+ ||++ ++..++..+ +++|| +|++++.+|.+..
T Consensus 64 ~r~~~pt~~~le~~la~l~g~~--~~v~fs-SG~~-Ai~~al~~l---------------l~~Gd--~VI~~~~~y~~t~ 122 (437)
T PRK05613 64 SRLTNPTVEALENRIASLEGGV--HAVAFA-SGQA-AETAAILNL---------------AGAGD--HIVTSPRLYGGTE 122 (437)
T ss_pred eCccChHHHHHHHHHHHHhCCC--eEEEeC-CHHH-HHHHHHHHh---------------cCCCC--EEEECCCccHHHH
Confidence 3334556788999999999985 367776 8886 455554443 47899 7999999999885
Q ss_pred HH----HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 196 LS----WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 196 ~~----~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
.. +...|+++++++ +. .|+++++++|+ ++|+++++++++|++|.+.|+++|+++||++|+++|+|++
T Consensus 123 ~~~~~~l~~~Gi~v~~vd-~~---~d~e~l~~~l~-----~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t 193 (437)
T PRK05613 123 TLFLVTLNRLGIEVTFVE-NP---DDPESWQAAVQ-----PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNT 193 (437)
T ss_pred HHHHHHHHhcCeEEEEEC-CC---CCHHHHHHhCC-----ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECC
Confidence 43 356799999997 32 28999999998 6899999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEE-ech
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLM-TKA 314 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~-~~~ 314 (609)
++.|.....+ .+ |+|++++|+||+++|++ ++|.+++ ++.
T Consensus 194 ~a~g~~~~p~-~~---GaDivv~S~~K~l~G~gd~~gG~vv~~~~ 234 (437)
T PRK05613 194 IATAALVRPL-EL---GADVVVASLTKFYTGNGSGLGGVLIDGGK 234 (437)
T ss_pred CccccccChH-Hh---CCCEEEeeccceecCCCcceeEEEEecCc
Confidence 9877553222 22 88999999999999764 3455554 443
No 197
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=9.2e-20 Score=197.95 Aligned_cols=349 Identities=14% Similarity=0.047 Sum_probs=208.6
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccch
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
+.|..+.+++.+.+.. .....|....+..++++.+.+++.+..| .+++ +|++| +|++++|..++. +
T Consensus 48 ~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~-~I~it-~G~~~al~~~~~-l----- 115 (433)
T PRK06855 48 KIPDWMKEIVAELVMD----DKSYGYCPTKGVLETREFLAELNNKRGGAQITPD-DIIFF-NGLGDAIAKIYG-L----- 115 (433)
T ss_pred CCCHHHHHHHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh-HEEEc-CcHHHHHHHHHH-h-----
Confidence 5666777777665532 1111121222223333334444433334 4554 89998 899989988765 3
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccchHHHH-HHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecc
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-RQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSAC 242 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~ 242 (609)
+.+|| .|++..+.|+.+.... ...|++++.+++++ +..+|+++|++++++. ++++++++++|
T Consensus 116 ----------~~~Gd--~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~i~l~~P 180 (433)
T PRK06855 116 ----------LRREA--RVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN---PSIAGILLINP 180 (433)
T ss_pred ----------cCCCC--eEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC---CCceEEEEECC
Confidence 36888 6999999998765432 34588999999874 3468999999999631 36788999999
Q ss_pred cCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEec-
Q 038499 243 SNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTK- 313 (609)
Q Consensus 243 sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~- 313 (609)
+||||.+.+. ++|+++|++||+++|+|++++.-. ....+.....++..+++.|++|.++.| ..+|+++++.
T Consensus 181 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~ 260 (433)
T PRK06855 181 DNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNA 260 (433)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCC
Confidence 9999999885 567888999999999999965321 111111111112347888999999755 4599999842
Q ss_pred ---h-hhc-cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh---cCHHHHHHHHH
Q 038499 314 ---A-LYQ-LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY---IGHEVIKKQEE 385 (609)
Q Consensus 314 ---~-~~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~---~g~~~i~~~~~ 385 (609)
. +.. ++.+.. ......+++.+.+. ++..++ .+. ...+.++...+
T Consensus 261 ~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~Q~--a~~~~l-~~~~~~~~~~~~~~~~~ 312 (433)
T PRK06855 261 DKDEVFKKYINSILN-------------------------AKMIEVCSTTLPQM--AIPRIM-SHPEYKNYLKERNKRYE 312 (433)
T ss_pred chhhHHHHHHHHHHH-------------------------hhccccCCChHHHH--HHHHhh-cCCcHHHHHHHHHHHHH
Confidence 1 100 111100 00011123333332 222222 221 12445566677
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCC-CCC----------CCCCCCChHHHHHHHhhhcC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGEN-TKT----------ETDKPLHGPFVATLLNDLFG 454 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~-~~~----------~~~~~l~~~~v~~~L~~~~G 454 (609)
+.++.+.+.|.+++++.+..+ ..+++.|...+.......+.. .++ ..+...+..+++..|.++.|
T Consensus 313 ~r~~~~~~~L~~~~~~~~~~p----~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 388 (433)
T PRK06855 313 KRSNIAYEKLKDVPGLKVNRT----NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTG 388 (433)
T ss_pred HHHHHHHHHHhcCCCeeccCC----CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcC
Confidence 778888899988777766544 446666665541100000000 000 00000124456655556689
Q ss_pred cEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 455 IQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 455 I~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|.+.+|..|. +. ..++|||+.. .++++++..++.|.+++++
T Consensus 389 V~v~PG~~F~-~~---------------------------~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 389 ICVVPLSSFC-TE---------------------------LNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEEecCCcCC-CC---------------------------CCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 9999998764 11 2358999975 4789999999999988864
No 198
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.87 E-value=3.6e-20 Score=197.20 Aligned_cols=305 Identities=16% Similarity=0.133 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ- 200 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~- 200 (609)
...++++.++++.|.+ +++++ +|++++|..++..+ +++|| +|+++...|.++...+..
T Consensus 52 ~~~~le~~lA~l~g~~---~v~~~-~gg~~Ai~~~l~al---------------l~~GD--~Vl~~~p~y~~~~~~~~~~ 110 (382)
T TIGR02080 52 TRDLLQQALAELEGGA---GAVVT-NTGMSAIHLVTTAL---------------LGPDD--LLVAPHDCYGGTYRLLNAL 110 (382)
T ss_pred hHHHHHHHHHHHhCCC---cEEEE-cCHHHHHHHHHHHH---------------cCCCC--EEEEcCCCcHHHHHHHHHH
Confidence 3667899999999952 57777 67777899888776 47898 799999999876655433
Q ss_pred ---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 201 ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 201 ---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
.++++..++. .|+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.+..
T Consensus 111 ~~~~~~~v~~~d~-----~d~~~l~~ai~-----~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~ 180 (382)
T TIGR02080 111 AKKGCFRVLFVDQ-----GDEQALRAALA-----QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL 180 (382)
T ss_pred HhhcCeEEEEECC-----CCHHHHHHhcC-----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 2466666542 38999999998 6899999999999999999999999999999999999999887654
Q ss_pred cccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
..++. .++|+++.|++|+++|+.+ .|++++++... .+.+... +...|
T Consensus 181 ~~pl~----~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~-~~~l~~~--------------------------~~~~g 229 (382)
T TIGR02080 181 QNPLA----LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQV-AEELAWW--------------------------ANNLG 229 (382)
T ss_pred CCchh----hCCCEEEeecceeccCCCCceeEEEEeCCHHH-HHHHHHH--------------------------HHccC
Confidence 33332 2679999999999998765 68877754331 1222100 00111
Q ss_pred -ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEec
Q 038499 356 -TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNIH 420 (609)
Q Consensus 356 -tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~~ 420 (609)
+.+... +.+.. ....-+....++..+++..+.+.|+.+|.++ |+-|. + ....++++|.+.
T Consensus 230 ~~~sp~~---a~l~l--r~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 230 VTGGAFD---SYLTL--RGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred CCCCHHH---HHHHH--cccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 111111 11111 1111233345566678888889999888875 44442 1 123568888886
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. +. .....+.+.| +.+.+.+.-|..-+ .|.......+.++.. -..|+.++.
T Consensus 305 ~-~~---------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~---------~~~gi~~~l 358 (382)
T TIGR02080 305 G-GE---------------QTVRRFLGGL-SLFTLAESLGGVESLIAHPATMTHAAMGPEAR---------AEAGISDTL 358 (382)
T ss_pred C-cH---------------HHHHHHHHcC-CcceEeccCCCCcceeECCCccCcccCCHHHH---------HhcCCCcCe
Confidence 4 21 1123555556 45666666664222 122211112222111 124667899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
||||++. |+.+.+++.|+..++
T Consensus 359 iRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 359 LRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred EEEEecc----CCHHHHHHHHHHHHh
Confidence 9999996 445555555555443
No 199
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=4.1e-20 Score=197.16 Aligned_cols=303 Identities=17% Similarity=0.168 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH--
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-- 197 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-- 197 (609)
.....++++.+++++|++ .++++++|+. ++..++.++ +++|| .|+++...|.+....
T Consensus 53 ~p~~~~le~~la~l~g~~---~~~~~~sG~~-Ai~~al~al---------------~~~Gd--~Vl~~~~~~~~t~~~~~ 111 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAE---RAVATATGMS-AIQAALMTL---------------LQAGD--HVVASRSLFGSTVGFIS 111 (380)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECCHHH-HHHHHHHHH---------------hCCCC--EEEEecCCcchHHHHHH
Confidence 345788999999999984 3455656665 566665554 37888 588888888765433
Q ss_pred --HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 198 --WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 198 --~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
....|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|.++||++|+++++|++++.+
T Consensus 112 ~~~~~~g~~v~~v~~~-----d~~~l~~~i~-----~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~ 181 (380)
T TIGR01325 112 EILPRFGIEVSFVDPT-----DLNAWEAAVK-----PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATP 181 (380)
T ss_pred HHHHHhCCEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccc
Confidence 34579999998864 7899999887 68999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.....+ + .++|+++.|+||+++|++. .|+++.++++ ++.+.... +..
T Consensus 182 ~~~~pl-~---~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~--~~~l~~~~-------------------------~~~ 230 (380)
T TIGR01325 182 VLQQPL-K---LGADVVVYSATKHIDGQGRVMGGVIAGSEEL--MAEVAVYL-------------------------RHT 230 (380)
T ss_pred ccCCch-h---hCCCEEEeeccceecCCCCeEEEEEEeCHHH--HHHHHHHH-------------------------Hhh
Confidence 332222 1 2789999999999998753 3778877776 22221110 000
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEe
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNI 419 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~ 419 (609)
.++..-.. +.+. +......+...++..+.+.++.+.|+++|+++ |.-|. + ....++++|.+
T Consensus 231 g~~~~p~~---a~~~--l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l 305 (380)
T TIGR01325 231 GPAMSPFN---AWVL--LKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDV 305 (380)
T ss_pred CCCCCHHH---HHHH--HhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 11111111 1111 11222344556677778888899999988775 33331 1 11356788877
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.. . .....+.+.| +.+.+.+.-|...+ .|+......+.++... ..|+.++
T Consensus 306 ~~-~----------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~ 358 (380)
T TIGR01325 306 AD-R----------------AAAWKVLDAV-ELVSITNNLGDAKSTITHPATTTHGRMQPEERA---------AAGIGDG 358 (380)
T ss_pred CC-H----------------HHHHHHHHcC-CcceEcccCCCCCeeeeCCCccCcccCCHHHHH---------hcCCCCC
Confidence 53 1 1234555555 44555555554222 1322211122221111 2467789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~ 520 (609)
.||||++.- +.+.+++-|++
T Consensus 359 liR~svGlE----~~~dl~~dl~~ 378 (380)
T TIGR01325 359 LVRLSVGLE----DVDDLIADLKR 378 (380)
T ss_pred eEEEEeccC----CHHHHHHHHHh
Confidence 999999964 44445554443
No 200
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=4.5e-20 Score=196.24 Aligned_cols=304 Identities=16% Similarity=0.159 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.++++.|++. .++ +++|+. ++..++.. +++|| .|+++...|++....+
T Consensus 49 ~p~~~~Le~~lA~l~g~~~--~~~-~~sG~a-ai~~~~~~----------------l~~Gd--~Viv~~~~y~~~~~~~~ 106 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHA--GFA-FGSGMA-AITAVMML----------------FSSGD--HVILTDDVYGGTYRVMT 106 (377)
T ss_pred ChHHHHHHHHHHHHhCCCc--eEE-eCCHHH-HHHHHHHH----------------hCCCC--EEEECCCccchHHHHHH
Confidence 3457789999999999863 455 568875 56655432 47898 6899999888665433
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
...|++++.++.. |+++++++++ +++++|++++|+||||.+.|+++|.++||++|+++++|++++.+
T Consensus 107 ~~~~~~G~~v~~v~~~-----d~~~l~~ai~-----~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 107 KVLNRFGIEHTFVDTS-----NLEEVEEAIR-----PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred HHHhcCCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 3469999998743 8999999998 68999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
+....+. .++|+++.|++|++|||.+ .|+++++++.. .+.+... ....
T Consensus 177 ~~~~p~~----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-~~~~~~~-------------------------~~~~ 226 (377)
T PRK07671 177 YWQSPIS----LGADIVLHSATKYLGGHSDVVAGLVVVNSPEL-AEDLHFV-------------------------QNST 226 (377)
T ss_pred ccCChhh----hCCeEEEecCcccccCCccceeEEEEeCcHHH-HHHHHHH-------------------------HHhh
Confidence 4432221 2779999999999999864 57777754321 1222110 0000
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEEe
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFNI 419 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~~ 419 (609)
.+..+... +.+.. ....-.....++.++.+..+.+.|++.|++. ++.|.- ....++++|.+
T Consensus 227 g~~~~~~~---a~l~~--~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 227 GGILGPQD---SWLLL--RGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred cCCCCHHH---HHHHH--cCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 11111111 11111 0111233455666778888889998888774 444421 11356788877
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
. +. -....+...| +.+.+.+.-|..++ .|......++..+... ..|+.++
T Consensus 302 -~-~~---------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~~ 354 (377)
T PRK07671 302 -G-SE---------------ETANKVLERL-QYFTLAESLGAVESLISIPSQMTHASIPADRRK---------ELGITDG 354 (377)
T ss_pred -C-CH---------------HHHHHHHHhC-CcceEccCCCCCCeEeECCCccccccCCHHHHH---------hcCCCCC
Confidence 4 21 1233444555 45555666665432 1221111222222211 2467789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.||||++.- |.+.+++-|+..
T Consensus 355 liR~svGlE----~~~dl~~dl~~a 375 (377)
T PRK07671 355 LIRISVGIE----DGEDLIEDLAQA 375 (377)
T ss_pred eEEEEeccC----CHHHHHHHHHHH
Confidence 999999964 455555555443
No 201
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=6.8e-20 Score=197.61 Aligned_cols=158 Identities=18% Similarity=0.173 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
.....+++.++++.|++ ..+++++|+. ++..++..+ +++|| .|+++...|+.....+
T Consensus 64 p~~~~Le~~lA~leg~~---~al~~~sG~~-Ai~~al~~l---------------l~~GD--~Vlv~~~~y~~t~~~~~~ 122 (431)
T PRK08248 64 PTTDVFEKRIAALEGGI---GALAVSSGQA-AITYSILNI---------------ASAGD--EIVSSSSLYGGTYNLFAH 122 (431)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHH-HHHHHHHHH---------------hCCCC--EEEEccCchhhHHHHHHH
Confidence 34677899999999964 3355557775 565555443 37899 6999998888765544
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
+..|++++.++.. |+++++++++ +++++|++++++||||.+.|+++|+++||++|+++|+|++++.|.
T Consensus 123 ~~~~~Gv~v~~vd~~-----d~e~l~~ai~-----~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~ 192 (431)
T PRK08248 123 TLPKLGITVKFVDPS-----DPENFEAAIT-----DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY 192 (431)
T ss_pred HHHhCCEEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc
Confidence 4579999999863 8999999998 689999999999999999999999999999999999999988665
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEec
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTK 313 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~ 313 (609)
...++ . .++|+++.|+||++||++. +|.+++..
T Consensus 193 ~~~pl-~---~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 193 LLRPI-E---HGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred cCChh-H---cCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 44433 2 3899999999999998863 77777643
No 202
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.86 E-value=1.2e-19 Score=195.82 Aligned_cols=344 Identities=12% Similarity=0.017 Sum_probs=206.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh------CCCCCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL------GGGQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~------g~~~~~~vift~sGt 149 (609)
.++.++.+... +.++.+.+++.+.+.....+.....|....+ ..++|+.+++++ +.+++ +|++| +|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G----~~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga 108 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQG----YDFLREKIAENDYQARGCDISAD-EIFIS-DGA 108 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCC----CHHHHHHHHHHHHHhcCCcCChh-hEEEC-CCH
Confidence 34555444332 3456677888776654311111111111112 345666666654 46665 89998 899
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce-----------EEEEecCCCCCCCH
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE-----------VVEIGLDDDGLLDI 218 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~-----------vv~v~~~~~g~ld~ 218 (609)
++++..+... +.+|| .|++..+.|+.+...++..|++ ++.++++.++.+.+
T Consensus 109 ~~al~~l~~~----------------~~~gd--~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (409)
T PRK07590 109 KCDTGNILDI----------------FGPDN--TIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVP 170 (409)
T ss_pred HHHHHHHHHh----------------cCCCC--EEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcc
Confidence 9998876543 36888 6999999999999889999987 88999875432322
Q ss_pred HHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC-CCcc
Q 038499 219 EALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT-DGYD 290 (609)
Q Consensus 219 e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~-~~~D 290 (609)
+ +.+ ++++++++++++||||.+++. ++|+++|++||+++|+|++++.-. .+..+..... .+.-
T Consensus 171 d-----~~~----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v 241 (409)
T PRK07590 171 E-----LPE----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECA 241 (409)
T ss_pred c-----Ccc----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccce
Confidence 2 111 478999999999999999885 457888999999999999976321 1111211110 1224
Q ss_pred EEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHHHHHHHHH
Q 038499 291 AIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRAALA 368 (609)
Q Consensus 291 ~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~aal~ 368 (609)
+++.|++|.+|.|+ .+|++++++++ ++.+.. +... .....+.. ..... .+.+.+.+.+. ..
T Consensus 242 i~~~SfSK~~~~pGlRiG~~i~~~~l--i~~~~~---~~~~---------~~~~~~~~-~~~~~~~~~s~~~q~a~--~~ 304 (409)
T PRK07590 242 IEFRSFSKTAGFTGTRCAYTVVPKEL--KGKTSD---GEGV---------SLNSLWNR-RQSTKFNGVSYIVQRAA--EA 304 (409)
T ss_pred EEEecCccccCCcCceeEEEEcCHHH--hhhccc---cchh---------hhHHHHHH-HHhhcccCcCHHHHHHH--HH
Confidence 66789999997553 59999999888 332100 0000 00000000 00000 12333333222 12
Q ss_pred HHHHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHH
Q 038499 369 FWVKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVA 446 (609)
Q Consensus 369 ~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 446 (609)
++ .+ ....+.++++.++.++++.+.|+.+ ++++..+ ..+++.|...+ .. ++..+++
T Consensus 305 ~l-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~----~g~~f~wi~~~-~~---------------~~~~~~~ 362 (409)
T PRK07590 305 VY-SPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGG----VNAPYIWVKTP-DG---------------MSSWDFF 362 (409)
T ss_pred Hh-cCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CcceEEEEECC-CC---------------CCHHHHH
Confidence 11 11 1123455666677788888888876 6766543 23444444444 11 3566777
Q ss_pred HHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 447 TLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 447 ~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.|.++.||.+++|..|... ..+++||++. .++++++..++.|..+
T Consensus 363 ~~l~~~~gv~v~pg~~f~~~---------------------------~~~~iRi~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 363 DKLLQEANVVGTPGSGFGPS---------------------------GEGYFRLSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred HHHHHHCCEEEeChhHhCCC---------------------------CCCEEEEEcc--CCHHHHHHHHHHHHhh
Confidence 77767679999988765311 1479999963 5889999988888754
No 203
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=4.8e-21 Score=197.47 Aligned_cols=223 Identities=17% Similarity=0.152 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR 199 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (609)
+..+.++++.+++++|++. .++++ +|+++++..++..+ +++|| .|+++...|.++...+.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~--~~~~~-~Gst~a~~~~l~al---------------~~~gd--~Vlv~~~~h~s~~~~~~ 117 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH--TFFLV-NGTSSSNKAVILAV---------------CGPGD--KILIDRNCHKSVINGLV 117 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC--EEEEc-CcHHHHHHHHHHHc---------------CCCCC--EEEEeCCchHHHHHHHH
Confidence 3458899999999999852 34446 78888888777665 47898 69999999999999999
Q ss_pred HcCceEEEEecCCC------CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 200 QSLAEVVEIGLDDD------GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 200 ~~G~~vv~v~~~~~------g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
..|+++++++.+.+ +.+|++++++++++. +++++++++++ |++|.+.|+++|+++||++|+++++|+||+
T Consensus 118 ~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~---~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~ 193 (294)
T cd00615 118 LSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEH---PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHG 193 (294)
T ss_pred HCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhC---CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcch
Confidence 99999999976532 478999999999742 46899999987 789999999999999999999999999987
Q ss_pred CC-----cccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 274 GP-----YVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 274 ~~-----~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
.. ..+.+... .++|+++.|+||+++|+.+.|++.++++.....++. ..
T Consensus 194 ~~~~~~~~~~~~~~~---~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~------------------------~~ 246 (294)
T cd00615 194 AHFRFHPILPSSAAM---AGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVN------------------------EA 246 (294)
T ss_pred hhhccCcccCcchhh---cCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHH------------------------HH
Confidence 52 22222222 378999999999999887778888776531100000 00
Q ss_pred cccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 349 EERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 349 ~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
......++|++..+.. +++.++ ...|.+ ..++..++.+++++++.
T Consensus 247 ~~~~~ttsps~~~~asl~~a~~~~--~~~g~~-~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 247 LNLHQSTSPSYLILASLDVARAMM--ALEGKE-LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHCCCCcHHHHHHHHHHHHHHH--HHHhHH-HHHHHHHHHHHHHHHHh
Confidence 2234456777655443 333333 334544 45667777888887764
No 204
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=5.8e-20 Score=194.63 Aligned_cols=236 Identities=11% Similarity=0.075 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 117 QHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 117 ~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
+..+.....+++.|+++-|+.. .++|. ||+. |++.++..+ +++|| +|+++...|.+...
T Consensus 58 R~~nPt~~~le~~la~LEg~~~--a~~~~-SGma-Ai~~~~~~l---------------l~~GD--~Vv~~~~~Yg~t~~ 116 (395)
T PRK08114 58 RRGTLTHFSLQEAMCELEGGAG--CALYP-CGAA-AVANAILAF---------------VEQGD--HVLMTGTAYEPTQD 116 (395)
T ss_pred CCCChhHHHHHHHHHHHhCCCe--EEEEh-HHHH-HHHHHHHHH---------------cCCCC--EEEEeCCCcHHHHH
Confidence 3334446678899999988752 45554 6655 677766554 47999 68888888877765
Q ss_pred HH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC--CeEEEec
Q 038499 197 SW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG--GFACFDF 270 (609)
Q Consensus 197 ~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g--~~vivD~ 270 (609)
.+ +..|+++.+++. .|.++++++|+ ++|++|++++++||+|.+.|+++|+++||++| ++++||.
T Consensus 117 l~~~~l~~~Gi~v~~vd~-----~d~~~l~~~l~-----~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDn 186 (395)
T PRK08114 117 FCSKILSKLGVTTTWFDP-----LIGADIAKLIQ-----PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDN 186 (395)
T ss_pred HHHHHHHhcCcEEEEECC-----CCHHHHHHhcC-----CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEEC
Confidence 54 457999999874 37899999998 68999999999999999999999999999984 9999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCC--CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG--SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~--g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
+++.|+. +++.++ |+|+++.|.|||++|+. +.|+++.+++.. +.+..
T Consensus 187 T~a~p~~-~~pl~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~--~~l~~------------------------- 235 (395)
T PRK08114 187 TWAAGVL-FKALDF---GIDISIQAGTKYLVGHSDAMIGTAVANARCW--EQLRE------------------------- 235 (395)
T ss_pred CCccccc-cCHHHc---CCcEEEEcCcccccCCCcceeEEEEcCHHHH--HHHHH-------------------------
Confidence 9999877 666665 89999999999999996 578777776552 11110
Q ss_pred cccccCCC-hhHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCc
Q 038499 349 EERESGGT-PQVIQMIRAALAFWV-KEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQ 412 (609)
Q Consensus 349 ~~r~~~gt-p~i~~~~~aal~~~~-~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~ 412 (609)
.+...|. .+... +|++ ....-.....++..+.+..+.+.|+++|.++ |+-|. + ....
T Consensus 236 -~~~~~G~~~~p~~------a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~g 308 (395)
T PRK08114 236 -NSYLMGQMVDADT------AYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSS 308 (395)
T ss_pred -HHHhccCCCCHHH------HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCc
Confidence 0011121 11111 1111 1112234556777788899999999999875 55442 1 1245
Q ss_pred ceEEEEecc
Q 038499 413 AILSFNIHS 421 (609)
Q Consensus 413 ~~~~f~~~~ 421 (609)
++++|.+..
T Consensus 309 g~~sf~l~~ 317 (395)
T PRK08114 309 GLFSFVLKK 317 (395)
T ss_pred eEEEEEecC
Confidence 688888764
No 205
>PLN02231 alanine transaminase
Probab=99.86 E-value=2.5e-19 Score=197.96 Aligned_cols=316 Identities=14% Similarity=0.047 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHh----C--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 123 VHEASNYIKKCL----G--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 123 ~~e~r~~ia~~~----g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
..++|+.|++++ | ++++ +|++| +|++++|..++.++. -.+|| .|+++.+.|+.+..
T Consensus 170 ~~~lReaIA~~~~~r~g~~~~pe-~I~iT-~Ga~~ai~~~~~~l~--------------~~~gd--~Vli~~P~Y~~y~~ 231 (534)
T PLN02231 170 IKGLRDAIAAGIEARDGFPADPN-DIFLT-DGASPAVHMMMQLLI--------------RSEKD--GILCPIPQYPLYSA 231 (534)
T ss_pred cHHHHHHHHHHHHhccCCCCCcc-cEEEe-CCHHHHHHHHHHHhc--------------cCCCC--EEEEeCCCChhHHH
Confidence 455556666554 4 3454 89998 899999999988762 03688 69999999999998
Q ss_pred HHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEec
Q 038499 197 SWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~ 270 (609)
.++..|++++.+++++ ++.+|+++|+++++..... .+++++++++|+||||.+.+ +++|+++|++||+++|+|+
T Consensus 232 ~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DE 311 (534)
T PLN02231 232 SIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADE 311 (534)
T ss_pred HHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 8999999999999975 3589999999999742211 26899999999999999987 4578899999999999999
Q ss_pred cccCC-c----ccccCCCCC----C--CCc-cEEEEcCCCCC-CCC-CCcEEEEE---echhhccCCCCCCccCCCceEe
Q 038499 271 AASGP-Y----VEIDVRSGQ----T--DGY-DAIFLSTHKFL-GGP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 271 A~~~~-~----~~id~~~~~----~--~~~-D~v~~S~hK~l-ggp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
++.-- + ....+.... . ... -+++.|++|.+ |-| ..+|++++ ++++ ++.+...
T Consensus 312 vY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l--~~~l~k~--------- 380 (534)
T PLN02231 312 VYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDV--REQIYKV--------- 380 (534)
T ss_pred cchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHH--HHHHHHH---------
Confidence 96531 1 111111110 0 011 24556999965 423 34899987 4555 2222100
Q ss_pred ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh----c-------CHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY----I-------GHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~----~-------g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
.. ...+++...+. .+. ..+... . ..+.+.+..++.++.+.+.|++++++.
T Consensus 381 ---------------~~-~~~~s~~~~Q~-~~~--~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 381 ---------------AS-VNLCSNISGQI-LAS--LVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred ---------------Hh-hhcCCChHHHH-HHH--HHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 00 11122222222 111 111100 0 123456677788889999999888888
Q ss_pred EeCCCCCCCcceEEEE-e-ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHH
Q 038499 403 ILGNTSTKRQAILSFN-I-HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSY 480 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~-~-~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~ 480 (609)
+..+ ..+.+.|. + .+ ....+ . ..........+++..|+++.||.+.+|..|....
T Consensus 442 ~~~p----~Ggfylw~~l~lp-~~~~~----~-~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~------------- 498 (534)
T PLN02231 442 CNKA----EGAMYLFPRIHLP-QKAIK----A-AEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVP------------- 498 (534)
T ss_pred ecCC----CeeeEEeccccCc-HHHHH----H-HhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCC-------------
Confidence 8655 34566652 2 11 00000 0 0000001234566767777899999998775210
Q ss_pred HHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 481 QIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 481 ~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
...++|+++. .++++++..++.|..+.+.
T Consensus 499 -------------g~~~~Rit~~--~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 499 -------------GTWHFRCTIL--PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred -------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 1357999985 6889988888888876654
No 206
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.86 E-value=2.4e-19 Score=188.41 Aligned_cols=280 Identities=15% Similarity=0.106 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEEC---CCCccchHH
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVG---PHEHHSNLL 196 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~---~~~h~s~~~ 196 (609)
..+..++++.+++++|.+++ +++++ +|+++++..++.++ +++|| .|++. .+.|.++..
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e-~ilv~-~gg~~a~~~~~~al---------------~~~gd--~Vli~~~d~p~~~s~~~ 113 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEE-KILVF-NRTSSAILATILAL---------------EPPGR--KVVHYLPEKPAHPSIPR 113 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcc-eEEEE-CCHHHHHHHHHHHh---------------CCCCC--EEEECCCCCCCchhHHH
Confidence 47789999999999999876 77777 66666788777776 37888 56653 468888888
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc---cCHHHHHHHHHHhCCeEEEecccc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~---~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
.++..|++++.. .++++++. . +++++++++. ++++|.+ .|+++|+++|++||+++++|+||+
T Consensus 114 ~~~l~ga~~~~~-------~~l~~l~~--~-----~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~ 178 (346)
T TIGR03576 114 SCKLAGAEYFES-------DELSELKK--I-----DGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASG 178 (346)
T ss_pred HHHHcCCEEecc-------CCHHHHhh--C-----cCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 888899986432 24555432 1 4678877764 6899998 678999999999999999999998
Q ss_pred CCcccc-cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 274 GPYVEI-DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 274 ~~~~~i-d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.+.... +.......+.|+++.|++|+++|+. .|++++++++ ++.+.... ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~l--i~~l~~~~------------------------~~~ 231 (346)
T TIGR03576 179 ARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKEL--VDKIKSVG------------------------EQF 231 (346)
T ss_pred ccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHH--HHHHHHhh------------------------cCc
Confidence 764321 1111111256899999999987777 5999999888 33332110 001
Q ss_pred cCC-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCC
Q 038499 353 SGG-TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGEN 431 (609)
Q Consensus 353 ~~g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~ 431 (609)
... .+.....+.+++. ....+.+++..++..+++.+.+.. +.+..+ ..+ |.|.-.+ .
T Consensus 232 ~~s~~~~~~~aa~~aL~-----~~~~~~~~~~l~~r~~~~~~~l~~---~~~~~~----~~~-f~~~~~~-~-------- 289 (346)
T TIGR03576 232 GLEAQAPLLAAVVRALE-----EFELSRIRDAFKRKEEVYLRLFDK---LNVERT----PTG-FVIKGVE-E-------- 289 (346)
T ss_pred ccCccHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHHHh---CCCCcC----CCe-EEEEeCC-C--------
Confidence 111 1222222222222 223455566666666666666653 333221 122 3333222 1
Q ss_pred CCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH--
Q 038499 432 TKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE-- 509 (609)
Q Consensus 432 ~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e-- 509 (609)
.+..+++..+.++.||.+++|..+. + .++|+||+++ +++
T Consensus 290 --------~~~~~~~~~ll~~~gV~v~~~~~f~--------~--------------------~~~~vRis~~---~~~~~ 330 (346)
T TIGR03576 290 --------EKLIEIGLDLLRNYGIITITAVGMP--------G--------------------ASKTLRFDLA---AKDAE 330 (346)
T ss_pred --------CCHHHHHHHHHHhCCEEEeCCcccC--------C--------------------CCCeEEEEEe---cChHH
Confidence 1233444455566899999765431 0 1489999998 344
Q ss_pred --HHHHHHHHHHHH
Q 038499 510 --EFEFTLEALEFI 521 (609)
Q Consensus 510 --eid~ll~al~~v 521 (609)
|++.++++|++-
T Consensus 331 ~~~~~~~~~al~~~ 344 (346)
T TIGR03576 331 RIGDDYLVEAVKDS 344 (346)
T ss_pred hcCHHHHHHHHHhc
Confidence 799999999764
No 207
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=2.2e-19 Score=192.08 Aligned_cols=334 Identities=15% Similarity=0.056 Sum_probs=220.1
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
.+.+.++..+.+.++ +. ++..+..-.+.+...+++++.|++++|.+. .++|. +|..+++..+.......... .
T Consensus 118 ~p~v~~a~~~ai~~y-G~-g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~s-SGy~AN~~~i~aL~~~~~~~--~ 190 (476)
T PLN02955 118 HPTISNAAANAAKEY-GM-GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCP-TGFAANMAAMVAIGSVASLL--A 190 (476)
T ss_pred CHHHHHHHHHHHHHc-CC-CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEEC-ChHHHHHHHHHHHhhccccc--c
Confidence 345777777777654 42 332344445567788999999999999873 46665 99998776664432100000 0
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHc----CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS----LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~----G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
.. .....++...|++....|.|....++.. +++++.++.+ |+++|+++|++.. ++.++|++..+.++
T Consensus 191 ~~--~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~--~~~~~Vv~EgV~Sm 261 (476)
T PLN02955 191 AS--GKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCK--MKRKVVVTDSLFSM 261 (476)
T ss_pred cc--ccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCC--CCceEEEEeCCCCC
Confidence 00 0000233337999999999999998876 5788888765 8999999997532 34578899999999
Q ss_pred cccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC----C-CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC
Q 038499 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS----G-QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS 320 (609)
Q Consensus 246 TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~----~-~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~ 320 (609)
.|.+.|+++|.++|++||+++++|+||+.+.....-.. . .....|+++.++.|.+|..+ |+++.++++ ++.
T Consensus 262 dGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G--Gfi~gs~~~--~~~ 337 (476)
T PLN02955 262 DGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG--GFIACSKKW--KQL 337 (476)
T ss_pred CCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC--ceeecHHHH--HHH
Confidence 99999999999999999999999999987644321110 0 01367999999999998554 788888866 222
Q ss_pred CCCCccCCCceEeecccccccccccccccccccCC-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC
Q 038499 321 FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG-TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ 399 (609)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p 399 (609)
+... +.. ..+..+ .|...+.+.+++..... + +..+++.+++.+++.+.+
T Consensus 338 l~~~--~~~--------------------~ifStalpp~~aaa~laal~l~~~---~-~~~r~~L~~n~~~fr~~~---- 387 (476)
T PLN02955 338 IQSR--GRS--------------------FIFSTAIPVPMAAAAYAAVVVARK---E-KWRRKAIWERVKEFKALS---- 387 (476)
T ss_pred HHHh--CCC--------------------CeecccccHHHHHHHHHHHHHHhc---C-HHHHHHHHHHHHHHHHhc----
Confidence 2110 000 001111 23344444455544321 2 235567777777777742
Q ss_pred ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHH
Q 038499 400 NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQS 479 (609)
Q Consensus 400 ~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~ 479 (609)
|+.+ ..||+.+.+.. . .....+.+.|.+ .||.+.+-...+.|.+
T Consensus 388 G~~~-------~sPI~pI~ig~-~----------------~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g----------- 431 (476)
T PLN02955 388 GVDI-------SSPIISLVVGN-Q----------------EKALKASRYLLK-SGFHVMAIRPPTVPPN----------- 431 (476)
T ss_pred CCCC-------CCCEEEEEeCC-H----------------HHHHHHHHHHHH-CCCEEEEECCCCCCCC-----------
Confidence 3322 25888777765 2 235577888876 4999886554443321
Q ss_pred HHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 480 YQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 480 ~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
...+||+++..+|++||++++++|..+...
T Consensus 432 ---------------~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 432 ---------------SCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred ---------------CceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 257999999999999999999999988654
No 208
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.86 E-value=2e-19 Score=189.38 Aligned_cols=331 Identities=15% Similarity=0.096 Sum_probs=217.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCCCc-EEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhh-cCCCceEEEECCCCc
Q 038499 114 YVGQHTTNMVHEASNYIKKCLGGGQEDA-MIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCL-RDEERWVVFVGPHEH 191 (609)
Q Consensus 114 ~~~~~~~~~~~e~r~~ia~~~g~~~~~~-vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h 191 (609)
+.+..+.+++.++++.++++++.+.+.. ++++|||| +++.+++..+ + ++|++ |++.. .
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT-~a~Eaa~~nl---------------~~~~g~~--vLv~g--~ 91 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDT-GAVEMALWSM---------------LGCRGVD--VLAWE--S 91 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchH-HHHHHHHHHc---------------CCCCCCe--EEEEC--H
Confidence 3456788999999999999999854434 45565554 4677776654 3 36764 44432 3
Q ss_pred cchH---HHHHHcCc-eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEE
Q 038499 192 HSNL---LSWRQSLA-EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFAC 267 (609)
Q Consensus 192 ~s~~---~~~~~~G~-~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vi 267 (609)
.+.. ..++..|+ ++..+..+....+|+++++. . . -+.++|+.+.||+..|+++|+..+ ++++++
T Consensus 92 FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~-----~---~v~~vhnETSTGv~npv~~i~~~~--~~~lli 159 (374)
T TIGR01365 92 FGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K-----N---DVVFTWNGTTSGVRVPNGDFIPAD--REGLTI 159 (374)
T ss_pred HHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C-----C---CEEEecCCCchheecccccccccc--CCCcEE
Confidence 3332 44566898 58888877777889998872 2 1 157999999999999998766433 589999
Q ss_pred EeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 268 FDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 268 vD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
||++.+++..+++|. ++|+++++.+|+||+|.|+++++++++. +.+.......+....+.+ +... ..|+.+
T Consensus 160 VDavSs~g~~~l~~d-----~iDv~~tgsQK~L~~ppGls~v~vs~~A--l~~~~~~~~y~~~~~~~~-~~~~-~~~~~~ 230 (374)
T TIGR01365 160 CDATSAAFAQDLDYH-----KLDVVTFSWQKVLGGEGAHGMLILSPRA--VARLESYTPAWPLPKIFR-LTKG-GKLNKK 230 (374)
T ss_pred EEccchhcCCCCChh-----HCcEEEEechhccCCCCceEEEEECHHH--HHHHhhcCCCCCChhhhc-cccc-cchhhh
Confidence 999999999999987 4799999999999999999999999998 333221100000000000 0000 011111
Q ss_pred ccccccCCChhHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceE-EEEeccCCCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFW-VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAIL-SFNIHSSTIN 425 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~-~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~-~f~~~~~~~~ 425 (609)
........||++..+..+...+. ++++.|++.+.+|.+++++.+++.++++..+.++......+++.+ ++.+.. +.-
T Consensus 231 ~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~-~~~ 309 (374)
T TIGR01365 231 IFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVD-PAI 309 (374)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCC-ccc
Confidence 12234556788766654333332 223348999999999999999999999844777764223455544 444433 210
Q ss_pred CcCCCCCCCCC-CCCCC-hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 426 SSLGENTKTET-DKPLH-GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 426 ~~~~~~~~~~~-~~~l~-~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
+. .. ....+ ...+.+.|.+ +||.+.+|.. . + ++..+||...
T Consensus 310 ~~-------~~~~~~~~~~~~~~~~l~~-~gi~i~~G~~------~-~----------------------~~~~fRIg~~ 352 (374)
T TIGR01365 310 DA-------LDEDAQADFAKELISTLEK-EGVAYDIGSY------R-D----------------------APSGLRIWCG 352 (374)
T ss_pred cc-------cccchhhHHHHHHHHHHHH-CCEEEecccc------c-c----------------------CCCceEEecC
Confidence 00 00 00011 4678888865 5999886532 1 1 2467999998
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 038499 504 YYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~ 523 (609)
...+.+|++.++++|..+.+
T Consensus 353 G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 353 ATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred CcCCHHHHHHHHHHHHHHHh
Confidence 88999999999999998754
No 209
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.86 E-value=6.7e-20 Score=195.03 Aligned_cols=303 Identities=16% Similarity=0.139 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.++++.|++. .+++ +||+. ++..++.. +++|| .|++++..|++....+
T Consensus 49 ~p~~~~Le~~la~l~g~~~--al~~-~SG~~-Al~~~l~~----------------l~pGd--~Vi~~~~~y~~t~~~~~ 106 (380)
T PRK06176 49 NPTRFALEELIADLEGGVK--GFAF-ASGLA-GIHAVFSL----------------FQSGD--HVLLGDDVYGGTFRLFD 106 (380)
T ss_pred ChhHHHHHHHHHHHhCCCC--EEEE-CCHHH-HHHHHHHH----------------cCCCC--EEEEcCCChhHHHHHHH
Confidence 3446789999999999763 4555 58876 67665543 47898 6888888888776544
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
...|++++.++.. |+++++++++ +++++|++++++||||.+.|+++|+++||+||+++|+|++++.+
T Consensus 107 ~~~~~~gi~v~~vd~~-----d~e~l~~ai~-----~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~ 176 (380)
T PRK06176 107 KVLVKNGLSCTIIDTS-----DLSQIKKAIK-----PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATP 176 (380)
T ss_pred HHHHhcCeEEEEcCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccc
Confidence 3468888888753 8999999997 68999999999999999999999999999999999999998876
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
+....+ . .++|++++|+||+++||.. .|+++.+++.. ...+... +..
T Consensus 177 ~~~~p~-~---~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~-~~~~~~~--------------------------~~~ 225 (380)
T PRK06176 177 YYQNPL-L---LGADIVVHSGTKYLGGHSDVVAGLVTTNNEAL-AQEIAFF--------------------------QNA 225 (380)
T ss_pred ccCCcc-c---cCCCEEEecCceeccCCccceeeEEEecHHHH-HHHHHHH--------------------------HHH
Confidence 543333 2 2789999999999998863 57777754331 1111110 000
Q ss_pred CCC-hhHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEE
Q 038499 354 GGT-PQVIQMIRAALAFWV-KEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSF 417 (609)
Q Consensus 354 ~gt-p~i~~~~~aal~~~~-~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f 417 (609)
.|. .+... ++++ ..........++..+.+.++.+.|++.|.+. ++.+.- ....++++|
T Consensus 226 ~G~~~~~~~------~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~ 299 (380)
T PRK06176 226 IGGVLGPQD------SWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSF 299 (380)
T ss_pred hcCCCCHHH------HHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE
Confidence 111 11000 0111 0111234444555666777888888888774 433321 113467788
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
.+.. . -....+++.| +.+.+.+.-|...+ .|.......+.++... ..|+.
T Consensus 300 ~~~~-~----------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~ 352 (380)
T PRK06176 300 TLKN-D----------------SEAVAFVESL-KLFILGESLGGVESLVGIPAFMTHACIPKEQRE---------AAGIR 352 (380)
T ss_pred EECC-H----------------HHHHHHHHcC-CcceEccCCCCCCceeeCCcccccccCCHHHHH---------hcCCC
Confidence 7754 1 1234455555 45566666554322 2322222223322211 24667
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
++.||||++.-+ ++.+++-|+..+
T Consensus 353 ~~liR~svGlE~----~~dli~dl~~Al 376 (380)
T PRK06176 353 DGLVRLSVGIEH----EQDLLEDLEQAF 376 (380)
T ss_pred cCeEEEEeccCC----HHHHHHHHHHHH
Confidence 899999999644 444554444444
No 210
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.86 E-value=1.4e-18 Score=191.84 Aligned_cols=430 Identities=16% Similarity=0.110 Sum_probs=258.5
Q ss_pred HHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHH
Q 038499 51 SEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYI 130 (609)
Q Consensus 51 ~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~i 130 (609)
.++.++.+.+.+... ..|+..+. -|+-|--+.+.++.+...+...+. |+.......+..++.+..++.+++
T Consensus 62 ~~~~l~~l~~~l~~~----sv~~~~P~-ry~ghm~~~~~~paila~~~a~~~----N~n~~~~e~SP~~t~lE~~vi~~l 132 (608)
T TIGR03811 62 MKDVLDELSSRLRTE----SVPWHSAG-RYWGHMNSETLMPAILAYNYAMLW----NGNNVAYESSPATSQMEEEVGKEF 132 (608)
T ss_pred HHHHHHHHHHHHhcC----CCCCCCcc-ceEEECcCCCCHHHHHHHHHHHHh----CCCCCccccCchHHHHHHHHHHHH
Confidence 556666666655321 12443321 388888888888887776655443 444444456677899999999999
Q ss_pred HHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc-chhhHHHH----------------------------------HHhh
Q 038499 131 KKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA-VPSILREK----------------------------------LIKC 175 (609)
Q Consensus 131 a~~~g~~~~~~vift~sGttaal~~l~~~l~~~-~~~~~~~~----------------------------------~~~~ 175 (609)
++++|.+.. ...||++||.+++..+..+..+. .|.++++. +.+.
T Consensus 133 a~l~G~~~~-~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~ 211 (608)
T TIGR03811 133 ATLMGYKNG-WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAH 211 (608)
T ss_pred HHHhCCCCC-CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhh
Confidence 999999875 56788789999988887766532 11111100 0000
Q ss_pred h-cCC---Cc-eEEEECCCCccchHHHHHHcCc---eEEEEecCCCCCCCHHHHHHHHhhhccCCCc-eEEEEecccCcc
Q 038499 176 L-RDE---ER-WVVFVGPHEHHSNLLSWRQSLA---EVVEIGLDDDGLLDIEALRSKLELYKDAKRP-ILGSFSACSNVT 246 (609)
Q Consensus 176 l-~~g---d~-~~Vlv~~~~h~s~~~~~~~~G~---~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~-~lv~~s~~sn~T 246 (609)
. .+| .+ .+++++...|+|...++...|+ .++.||+|+++++|+++|+++|.+....+.+ .+|+.+.+++.+
T Consensus 212 ~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~ 291 (608)
T TIGR03811 212 SARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEE 291 (608)
T ss_pred ccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCC
Confidence 0 010 01 1588899889999999999988 6999999999999999999999764433434 467888999999
Q ss_pred ccccCHHHHHHHH---HHhCC--eEEEeccccCCccc--cc--------------------C-------CC-----C-CC
Q 038499 247 GIYSDTRSIARLL---HQYGG--FACFDFAASGPYVE--ID--------------------V-------RS-----G-QT 286 (609)
Q Consensus 247 G~~~dl~~I~~la---~~~g~--~vivD~A~~~~~~~--id--------------------~-------~~-----~-~~ 286 (609)
|.+.|+++|+++| +++|+ |+|||+|+++.... .+ + .+ + ..
T Consensus 292 GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl 371 (608)
T TIGR03811 292 GAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI 371 (608)
T ss_pred cccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC
Confidence 9999999999998 67887 69999998763210 00 0 00 0 12
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCChhH-HHHH
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV-IQMI 363 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i-~~~~ 363 (609)
..+|.+++++|||+..|.++|++++++.... +....++....+. .....+ .....+...+.. ...+
T Consensus 372 e~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~---------~~p~~~--g~~~legSR~ga~Alkl 440 (608)
T TIGR03811 372 SEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA---------DIPALL--GAYILEGSKAGATAASV 440 (608)
T ss_pred cCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc---------cCcccc--cccceecCCccHHHHHH
Confidence 5789999999999999999999999976421 1111111110000 000000 000111111221 1111
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC------CCceEE--eCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 364 RAALAFWVKEYIGHEVIKKQEETYIERALERLLP------NQNIKI--LGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~------~p~i~v--~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
.+++...-....|+..+..+..++++++.+.|.. -+.+++ +.+ +.+++++|...+ ..+.
T Consensus 441 W~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~---pdlniV~Fr~~~-~g~~--------- 507 (608)
T TIGR03811 441 WAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTK---PDFNMVDYVFNE-KGND--------- 507 (608)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCC---CCcceEEEEEec-CCCc---------
Confidence 2222221013347888999999999999999987 355665 433 468999999876 2210
Q ss_pred CCCCCChHHHHHHHhhhcCcEe----------ccCcccCChhhhhhcCCChhHHHHHHHHH-hhCC---CCCCCcEEEEe
Q 038499 436 TDKPLHGPFVATLLNDLFGIQA----------RGGCACAGPYGHHLLDLDEAQSYQIRSAI-QKGY---VGVKPGWTRIS 501 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v----------~~G~~ca~p~~~~ll~i~~~~~~~~~~~~-~~~~---~~~~~g~iRls 501 (609)
..-..+.+.+.+.+++.+.- ..-..+...|+.... .+.+-+ .... .+.+-..+|-+
T Consensus 508 --~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~--------~~~~~~~~~~~~~~~~~~~~~lr~~ 577 (608)
T TIGR03811 508 --DLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPF--------AFVNSLGFSDEEWQRAGKVTILRAS 577 (608)
T ss_pred --cHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHH--------HHHHHcCCChhhhccCCceEEEEEE
Confidence 00124566666666544322 111111112332211 010000 0000 11123578988
Q ss_pred c--CCCCCHHHHHHHHHHHHHHHHh
Q 038499 502 F--PYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 502 ~--~~~~t~eeid~ll~al~~v~~~ 524 (609)
+ +|.++.+-++.+++.|+.++.+
T Consensus 578 ~m~p~~~~~~~~~~~~~~~~~~~~~ 602 (608)
T TIGR03811 578 VMTPYMNDKENFDEYAPKIKAAMQE 602 (608)
T ss_pred ecCcccCChhhHHHHHHHHHHHHHH
Confidence 7 4555557788888888877654
No 211
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=189.74 Aligned_cols=310 Identities=15% Similarity=0.060 Sum_probs=203.5
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG---GGQEDAMIFCGSGTTA 151 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g---~~~~~~vift~sGtta 151 (609)
+..+.|+.+... +.|+.+.+++.+.+.. ...+. | ... ...++|+.++++++ .+++ +|++| +|+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~--~~~~~--Y-~~~----~~~~Lr~aia~~~~~~~~~~~-~i~it-~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNS--DTLRI--Y-YDS----PDEELIEKILSYLDTDFLSKN-NVSVG-NGADE 87 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhh--hhhhc--C-CCC----ChHHHHHHHHHHhCCCCCCcc-eEEEc-CCHHH
Confidence 366777766544 4566788888776542 11110 1 111 14578889999998 6666 89888 89999
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~ 231 (609)
+|..++..+ | .|++.++.|+.+...++..|++++.+++++++.++... +.
T Consensus 88 ~i~~~~~~~-------------------d--~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~~----- 137 (335)
T PRK14808 88 IIYVMMLMF-------------------D--RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----VG----- 137 (335)
T ss_pred HHHHHHHHh-------------------C--cEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----cc-----
Confidence 999887754 2 48888999999999999999999999998777655332 22
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC-CCCCCccEEEEcCCCCCCCC-CCcEEE
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS-GQTDGYDAIFLSTHKFLGGP-GSPGIL 309 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~-~~~~~~D~v~~S~hK~lggp-~g~G~L 309 (609)
+++++++++++||||.+.+.+++.+++ ++++++|+|+++..-. .-.+.+ ......-+++.|++|.+|-| ..+|++
T Consensus 138 -~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~ 214 (335)
T PRK14808 138 -EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFH-GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYV 214 (335)
T ss_pred -CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhc-CCchHHHHHhCCCEEEEEechhhccCcccceEEE
Confidence 468999999999999999999999998 5899999999965321 101111 00012247778999999844 459999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++++++ ++.+.... ...+.+.+.+.+ + ...+.+....+...++.++.++
T Consensus 215 v~~~~~--~~~l~~~~--------------------------~~~~~~~~~q~a-~--~~~l~~~~~~~~~~~~~~~~r~ 263 (335)
T PRK14808 215 VSSEKF--IDAYNRVR--------------------------LPFNVSYVSQMF-A--KVALDHREIFEERTKFIVEERE 263 (335)
T ss_pred EeCHHH--HHHHHHhc--------------------------CCCCCCHHHHHH-H--HHHHhCHHHHHHHHHHHHHHHH
Confidence 999887 33331110 001222222221 1 1111111122333445555577
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|+++ ++.+..+ ..+++++.+.. .+..++.+.|.+ .||.++. |
T Consensus 264 ~l~~~L~~~-g~~~~~~----~g~f~~~~l~~------------------~~~~~~~~~l~~-~Gi~V~~---~------ 310 (335)
T PRK14808 264 RMKSALREM-GYRITDS----RGNFVFIFMEK------------------EEKERLLEHLRA-KNIAVRS---F------ 310 (335)
T ss_pred HHHHHHHHC-CCEECCC----CCeEEEEeCCC------------------ccHHHHHHHHHH-CCeEEEE---C------
Confidence 788888876 6776544 34455444332 245678888865 6999982 1
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.++||+++ +.++.++++++|+.+
T Consensus 311 -------------------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 311 -------------------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred -------------------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 257999998 889999999999753
No 212
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.7e-19 Score=192.12 Aligned_cols=331 Identities=17% Similarity=0.155 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH----
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS---- 197 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~---- 197 (609)
...++++.++++.|.+. .+ ++++|+. |+..++.++ +++|| .|+++...|++....
T Consensus 64 ~~~~le~~lA~l~g~~~--al-~~~SG~~-Ai~~al~al---------------l~pGd--~VIv~~~~y~~t~~~~~~~ 122 (427)
T PRK05994 64 TNAVLEERVAALEGGTA--AL-AVASGHA-AQFLVFHTL---------------LQPGD--EFIAARKLYGGSINQFGHA 122 (427)
T ss_pred cHHHHHHHHHHHhCCCc--EE-EEcCHHH-HHHHHHHHH---------------hCCCC--EEEEecCcchhHHHHHHHH
Confidence 35678999999999863 34 4457776 455555554 47898 699999999876654
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
+...|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|.++||+||+++++|++++.|+.
T Consensus 123 ~~~~G~~v~~vd~~-----d~~~l~~ai~-----~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~ 192 (427)
T PRK05994 123 FKSFGWQVRWADAD-----DPASFERAIT-----PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL 192 (427)
T ss_pred HHhcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc
Confidence 35579999998754 8999999997 6899999999999999999999999999999999999999987754
Q ss_pred cccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEechhhccCCCCC---Ccc---C-CCceEeeccccccccccccccc
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTKALYQLGSFPP---STC---G-GGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~~~~~l~~~~p---~~~---g-gg~v~~~~~~~~~~~~~~~~~~ 349 (609)
...+ . .++|+++.|+||++||+++ +|.+++....+.....+. ... + |+.+...+ +............
T Consensus 193 ~~pl-~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 267 (427)
T PRK05994 193 IRPI-E---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHET-FGNFAFAIAARVL 267 (427)
T ss_pred CCcc-c---cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHH-hhhhhhHHHHHHH
Confidence 3332 2 3899999999999998875 565565422100000000 000 0 01100000 0000000000000
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC--------------CCCcce
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS--------------TKRQAI 414 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~--------------~~r~~~ 414 (609)
.....|.. +.-..+.+. +.+..-.+.+.++..+++.++.+.|+++|++. |+-|.- ....++
T Consensus 268 ~~~~~G~~--~~~~~A~l~--~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~ 343 (427)
T PRK05994 268 GLRDLGPA--ISPFNAFLI--LTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAV 343 (427)
T ss_pred HHHhcCCC--CCHHHHHHH--HcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEE
Confidence 00111211 111122211 11223456667778888999999999999875 444421 113557
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYV 491 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~ 491 (609)
++|.+.+ +. -....+++.| +.+.+.+.-|...+ .|.......+.++... ..
T Consensus 344 ~sf~l~~-~~---------------~~~~~~~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~~ 397 (427)
T PRK05994 344 FTFGLKG-GY---------------EAGVKLVSSL-KLFSHLANIGDTRSLVIHPASTTHRQLTDEQKV---------AA 397 (427)
T ss_pred EEEEecC-CH---------------HHHHHHHHhC-CcceeccccCCCcceeeCCCCCCcccCCHHHHH---------hc
Confidence 8888764 21 1234555666 45666666664332 1221111122222211 24
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 492 GVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 492 ~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
|+.++.||||++.- +.+.+++.|+..+
T Consensus 398 gi~~~liRlsvGlE----~~~dli~dl~~Al 424 (427)
T PRK05994 398 GAGPDVVRLSIGIE----DVDDIIADLEQAL 424 (427)
T ss_pred CCCCCcEEEEeccC----CHHHHHHHHHHHH
Confidence 56678999999964 4445555555444
No 213
>PRK07505 hypothetical protein; Provisional
Probab=99.85 E-value=4.6e-19 Score=190.90 Aligned_cols=350 Identities=15% Similarity=0.084 Sum_probs=205.7
Q ss_pred CCCccccCCCCCCceEEecCCCCCCC----hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTASGRS----LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~g~~----~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.+.++.+..|+ .|+|..+.+.. ++.|.+++.+++.. +++.+...+ .+....+...++++.+++++|. +
T Consensus 35 ~~G~~~~d~~g~---~~ld~~s~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~-~~~~~~~~~~~l~~~la~~~~~--~ 107 (402)
T PRK07505 35 REGILITLADGH---TFVNFVSCSYLGLDTHPAIIEGAVDALKR-TGSLHLSSS-RTRVRSQILKDLEEALSELFGA--S 107 (402)
T ss_pred cCCccEEecCCc---eEEEeecCCccCCCCCHHHHHHHHHHHHH-hCCCCCCcc-chhhhhHHHHHHHHHHHHHhCC--C
Confidence 445556666664 38887655433 78899999988864 343222211 1223466789999999999987 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCC
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLD 217 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld 217 (609)
.++++ +|++++...+ .+.... .+.+++..+|+.....|+++. ..+...+.+++.++.+ |
T Consensus 108 -~~~~~-sG~~a~~~ai-~~~~~~-----------~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d 168 (402)
T PRK07505 108 -VLTFT-SCSAAHLGIL-PLLASG-----------HLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN-----D 168 (402)
T ss_pred -EEEEC-ChHHHHHHHH-HHHHhc-----------ccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----C
Confidence 56666 7887643333 221100 012233335666677787753 2344456788888763 8
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC-cc----cccCCCCC--CCCcc
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP-YV----EIDVRSGQ--TDGYD 290 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~-~~----~id~~~~~--~~~~D 290 (609)
+++|+++++ ++++++++++++|+||.+.|+++|.++|++||+++|+|++++.+ +. ........ .....
T Consensus 169 ~~~l~~~~~-----~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~ 243 (402)
T PRK07505 169 LDALEDICK-----TNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERT 243 (402)
T ss_pred HHHHHHHHh-----cCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCe
Confidence 999999887 46788899999999999999999999999999999999998532 11 11101111 11335
Q ss_pred EEEEcCCCCCCCCCCcEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHH
Q 038499 291 AIFLSTHKFLGGPGSPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAAL 367 (609)
Q Consensus 291 ~v~~S~hK~lggp~g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal 367 (609)
+++.|+.|.+|+++ |++++ ++++ ++.+.....+ . ...++++..+.. .+++
T Consensus 244 i~~~s~sK~~~~~G--g~~~~~~~~~--~~~~~~~~~~----------------------~-t~~~~~~~~a~aa~~a~l 296 (402)
T PRK07505 244 IIAASLGKAFGASG--GVIMLGDAEQ--IELILRYAGP----------------------L-AFSQSLNVAALGAILASA 296 (402)
T ss_pred EEEEechhhhhccC--eEEEeCCHHH--HHHHHHhCCC----------------------c-eeCCCCCHHHHHHHHHHH
Confidence 67779999998653 77765 4455 2222111000 0 012333333322 2333
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHH
Q 038499 368 AFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVAT 447 (609)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 447 (609)
+.. .........++.++....+.+.+.. +......++..+.+.. . .....+.+
T Consensus 297 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~g~~~~i~~~~~~~-~----------------~~~~~~~~ 349 (402)
T PRK07505 297 EIH--LSEELDQLQQKLQNNIALFDSLIPT--------EQSGSFLPIRLIYIGD-E----------------DTAIKAAK 349 (402)
T ss_pred HHH--hccCcHHHHHHHHHHHHHHHHHHHh--------cCCCCCCCEEEEEeCC-H----------------HHHHHHHH
Confidence 322 2223333333333333332222111 1011233333333222 1 13567888
Q ss_pred HHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 448 LLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 448 ~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.|.+ .||.+++......+. .+.++||+++..+|++|+++++++|+.++.++
T Consensus 350 ~l~~-~Gi~v~~~~~p~~~~--------------------------~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 350 QLLD-RGFYTSPVFFPVVAK--------------------------GRAGLRIMFRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred HHHH-CCCeEeeecCCCCCC--------------------------CCceEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 8876 599998542111000 13689999999999999999999999998765
No 214
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=1.7e-19 Score=191.64 Aligned_cols=301 Identities=13% Similarity=0.067 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH----H
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS----W 198 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~----~ 198 (609)
..++++.|+++.|+. .++++ +|+++|+..++..+ +++|| +|+++...|++.... .
T Consensus 63 ~~~Le~~iA~le~~~---~~~~~-~sG~~Ai~~~l~al---------------l~~GD--~Vvv~~~~Y~~t~~l~~~~l 121 (394)
T PRK09028 63 HFAFQAAIVELEGGA---GTALY-PSGAAAISNALLSF---------------LKAGD--HLLMVDSCYEPTRDLCDKIL 121 (394)
T ss_pred HHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH---------------hCCCC--EEEEECCCcHHHHHHHHHhh
Confidence 557889999998764 45666 44555777776655 48999 688888888766542 2
Q ss_pred HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 199 RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 199 ~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
...|+++..++.+ +.++++++++ ++|++|++++++||||.+.|+++|+++||+||+++++|++++.|...
T Consensus 122 ~~~Gi~v~~v~~~-----~~e~l~~~l~-----~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~ 191 (394)
T PRK09028 122 KGFGIETTYYDPM-----IGEGIRELIR-----PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINS 191 (394)
T ss_pred hhcceEEEEECCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccC
Confidence 3468888877643 5678888887 68999999999999999999999999999999999999999887432
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
..+ . .|+|+++.|.|||++|+.. .|+++.+++. .+.+... ....+.+
T Consensus 192 ~Pl-~---~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~--~~~l~~~-------------------------~~~~G~~ 240 (394)
T PRK09028 192 RPF-E---MGVDISIQAATKYIVGHSDVMLGTATANEKH--WDQLREH-------------------------SYLMGQC 240 (394)
T ss_pred Ccc-c---cCceEEEEeCCeEecCCCCEEEEEEECCHHH--HHHHHHH-------------------------HHhcCCC
Confidence 111 2 2899999999999999864 4666555554 1222100 0001111
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CCCcceEEEEeccC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TKRQAILSFNIHSS 422 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~r~~~~~f~~~~~ 422 (609)
.+... +-+ .+..........++..+.+..+.+.|+++|.++ |+-|. + ....++++|.+..
T Consensus 241 ~~p~~---a~l--~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~- 314 (394)
T PRK09028 241 TSPDD---VYL--AMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQ- 314 (394)
T ss_pred CCHHH---HHH--HHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECC-
Confidence 11111 111 111112345556777788889999999998874 54442 1 1235688888863
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
+. .-....+.+.| +.+.+.+.-|...+ .|+... .+... + ..++.++.||
T Consensus 315 ~~--------------~~~~~~f~~~l-~l~~~~~slG~~~sLv~~p~~~~--~~~~~----------~-~~~~~~~liR 366 (394)
T PRK09028 315 GD--------------PKAVTALVEGM-QHFKMGFSWGGFESLILGVFGIN--KLRTA----------T-NWDFSKPLIR 366 (394)
T ss_pred CC--------------HHHHHHHHHhC-CcceEecccCCCcceeECCCCcC--ccCch----------h-hhcCCCCeEE
Confidence 11 01233455555 45566665554322 121111 11100 0 0233458999
Q ss_pred EecCCCCCHHHHHHHHHHHH
Q 038499 500 ISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~ 519 (609)
||++.-..++=++.+.++|+
T Consensus 367 ~svGlEd~~dLi~Dl~~Al~ 386 (394)
T PRK09028 367 LHIGLEDVDDLIADLEAGFE 386 (394)
T ss_pred EEeCcCCHHHHHHHHHHHHH
Confidence 99997544443444444443
No 215
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.85 E-value=2.4e-19 Score=190.52 Aligned_cols=285 Identities=15% Similarity=0.099 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 120 TNMVHEASNYIKKCLG---GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g---~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
..+++.+.+++.+..| .+++ +|++| +|+++++..+..++. +++|| .|+++.+.|+.+..
T Consensus 65 ~~lr~~ia~~l~~~~~~~~~~~~-~I~it-~G~~~~i~~~~~~l~--------------~~~gd--~Vl~~~p~y~~~~~ 126 (364)
T PRK07865 65 PELREAIVGWLARRRGVTGLDPA-AVLPV-IGSKELVAWLPTLLG--------------LGPGD--VVVIPELAYPTYEV 126 (364)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcc-cEEEc-cChHHHHHHHHHHHc--------------CCCCC--EEEECCCCcccHHH
Confidence 3444455555555445 4465 89888 899999988877653 36888 69999999999988
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEecccc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~ 273 (609)
.++..|++++.++ +++++. . .+++++++++++||||.+.+. ++|.++|++||+++++|++++
T Consensus 127 ~~~~~g~~~~~~~-------~~~~l~----~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~ 191 (364)
T PRK07865 127 GARLAGATVVRAD-------SLTELG----P----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL 191 (364)
T ss_pred HHHhcCCEEEecC-------ChhhCC----c----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh
Confidence 8888999998875 233322 1 468999999999999999874 578888999999999999976
Q ss_pred CCcc-cccCCCCC------CCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 274 GPYV-EIDVRSGQ------TDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 274 ~~~~-~id~~~~~------~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
.... ...+..+. .....+++.|++|.+|.|+ .+|+++.++++ ++.+...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~--~~~~~~~--------------------- 248 (364)
T PRK07865 192 ELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPAL--VAELLEV--------------------- 248 (364)
T ss_pred hhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHH--HHHHHHH---------------------
Confidence 3211 10011010 0123488889999997553 48999998887 2222110
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTIN 425 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~ 425 (609)
.......++.+.+.+ +.. ++.+....+..++..++.++.+.+.|++. ++.+..+ ..+++.+...+
T Consensus 249 ---~~~~~~~~~~~~q~~--~~~-~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~---- 313 (364)
T PRK07865 249 ---RKHAGMMVPAPVQAA--MVA-ALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDHS----EAGLYLWATRG---- 313 (364)
T ss_pred ---HHhcCCCcCHHHHHH--HHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC----CccEEEEEeCC----
Confidence 000111223333321 112 22222234555666677788888888875 6665544 23444444333
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.+...+.+.|.+ .||.+++|..+. +. .++++||+++.
T Consensus 314 --------------~~~~~~~~~l~~-~gv~v~pg~~f~-~~--------------------------~~~~iRi~~~~- 350 (364)
T PRK07865 314 --------------EDCWDTVAWLAE-RGILVAPGDFYG-PA--------------------------GAQHVRVALTA- 350 (364)
T ss_pred --------------CCHHHHHHHHHH-CCEEEeCccccC-cC--------------------------CCCEEEEEecC-
Confidence 235677787855 699999876443 10 15899999974
Q ss_pred CCHHHHHHHHHHHH
Q 038499 506 MSNEEFEFTLEALE 519 (609)
Q Consensus 506 ~t~eeid~ll~al~ 519 (609)
++++++..++.|+
T Consensus 351 -~~~~~~~~~~~l~ 363 (364)
T PRK07865 351 -TDERIAAAVERLA 363 (364)
T ss_pred -CHHHHHHHHHHhh
Confidence 6899999988874
No 216
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=5.3e-19 Score=188.56 Aligned_cols=331 Identities=14% Similarity=0.132 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
...+++++.+++++|.+ +++++ +|+++++..++.+++ +++|| .|++++++|+++..+++.
T Consensus 31 ~~~~~~e~~la~~~g~~---~~v~~-~sgt~al~~~l~~~~--------------~~~Gd--~Viv~~~t~~~~~~~~~~ 90 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA---KVLLT-PSCTAALEMAALLLD--------------IQPGD--EVIMPSYTFVSTANAFVL 90 (375)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHhC--------------CCCCC--EEEECCCCcHHHHHHHHH
Confidence 34677888899999884 68888 556667877766554 47888 799999999999999999
Q ss_pred cCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 201 SLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 201 ~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.|++++.++++++ +.+|+++++++++ +++++++++ |++|...|+++|.++|++||+++|+|+||+.+.. .
T Consensus 91 ~G~~~v~~d~d~~~~~~d~~~le~~i~-----~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~ 161 (375)
T PRK11706 91 RGAKIVFVDIRPDTMNIDETLIEAAIT-----PKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-Y 161 (375)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHhcC-----CCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccc-c
Confidence 9999999999875 4789999999998 578988765 4699999999999999999999999999987753 2
Q ss_pred cCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 280 DVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
+-.+... ..|+-++|+| |.++.+.| |++++++ ++ .+++......|..... +.......+ .....|+
T Consensus 162 ~~~~~g~-~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~--~~~~~~~~~~g~~~~~---~~~~~~~~~----~~~~~g~ 230 (375)
T PRK11706 162 KGRALGT-IGHIGCFSFHETKNYTAGEG-GALLINDPAL--IERAEIIREKGTNRSQ---FFRGQVDKY----TWVDIGS 230 (375)
T ss_pred CCeeeec-CcCEEEEeCCCCccccccCC-eEEEECCHHH--HHHHHHHHHcCCCcch---hhccCCCcc----eeeeccc
Confidence 2222211 2478888888 99975444 6566654 44 2222222211110000 000000000 0011233
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc---eEEeC-CCCCCC-cceEEEEeccCCCCCcCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN---IKILG-NTSTKR-QAILSFNIHSSTINSSLGEN 431 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~---i~v~~-~~~~~r-~~~~~f~~~~~~~~~~~~~~ 431 (609)
...+.-+.+++... +....+.+.++.+++.+++.+.|..+++ +.+.. +.+... ...+.+.+.. .
T Consensus 231 ~~~~~~~~aa~~~~--ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 299 (375)
T PRK11706 231 SYLPSELQAAYLWA--QLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD-L-------- 299 (375)
T ss_pred ccCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC-c--------
Confidence 22222222332221 2223677778888889999999988762 44321 111111 1122222322 1
Q ss_pred CCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC--hhhhhh--cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 432 TKTETDKPLHGPFVATLLNDLFGIQARGGCACAG--PYGHHL--LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 432 ~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~--p~~~~l--l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
.+.+.+.+.|.+ .||.++.+...-. |..... ..-+.+.++.+ ....+-+.++..++
T Consensus 300 --------~~r~~l~~~L~~-~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~-----------~~~~l~lP~~~~l~ 359 (375)
T PRK11706 300 --------EDRSALINFLKE-AGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKE-----------SERLLRLPLFYNLT 359 (375)
T ss_pred --------CCHHHHHHHHHH-CCCCccccCCccCcchhhHhcCCCCCCChHHHHH-----------HhCcEeccCCCCCC
Confidence 357889999976 5999875431110 110100 00112333333 24678999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 038499 508 NEEFEFTLEALEFIA 522 (609)
Q Consensus 508 ~eeid~ll~al~~v~ 522 (609)
++|+++++++|+++.
T Consensus 360 ~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 360 DVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999764
No 217
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.7e-19 Score=194.24 Aligned_cols=326 Identities=17% Similarity=0.115 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.++++.|... .+ ++++|+ +++..++..+ +++|| .|+++...|++....+..
T Consensus 58 pt~~~Le~~lA~l~g~~~--~l-~~ssG~-~Ai~~al~al---------------~~~Gd--~Vl~~~~~Y~~t~~~~~~ 116 (425)
T PRK06084 58 PTNDVLEQRVAALEGGVG--AL-AVASGM-AAITYAIQTI---------------AEAGD--NIVSVAKLYGGTYNLLAH 116 (425)
T ss_pred chHHHHHHHHHHHhCCCc--ee-EehhHH-HHHHHHHHHH---------------hCCCC--EEEEeCCCcchHHHHHHH
Confidence 345689999999999652 45 444777 5788777765 37888 588888888866655543
Q ss_pred ----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.|+++..++. .|+++++++++ +++++|++++++||||.+.|+++|.++||+||+++|+|++++.|.
T Consensus 117 ~l~~~gi~v~~~d~-----~d~e~le~ai~-----~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~ 186 (425)
T PRK06084 117 TLPRIGIETRFAAH-----DDIAALEALID-----ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPV 186 (425)
T ss_pred hcccceeEEEEECC-----CCHHHHHHHhc-----cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 4777777754 38999999998 579999999999999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccc-----cc-
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLE-----DI- 348 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~-----~~- 348 (609)
....+ . .++|+++.|+||+++|++. +|.+++. ...- ........ . . +...+..|.. ..
T Consensus 187 ~~~p~-~---~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~-~~~~~~~~-~--~------~~~~~~~~~~~~~~~~~g 252 (425)
T PRK06084 187 LCRPF-E---HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFP-WAEHKERF-A--L------LNTPDPSYHGVTYTEAFG 252 (425)
T ss_pred cCChh-h---cCCCEEEECchhcccccccceeEEEEeCCccc-hhhccccc-c--c------cccCCcccccchhhhhcc
Confidence 43222 2 2789999999999998854 4444543 3210 00000000 0 0 0000000100 00
Q ss_pred ------ccc--ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-----------
Q 038499 349 ------EER--ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS----------- 408 (609)
Q Consensus 349 ------~~r--~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~----------- 408 (609)
..+ ...+.-..+.-..+.+ .+......+...++..+.+..+.+.|+++|.+. |+-|.-
T Consensus 253 ~~~~~~~~~~~~~~~~g~~l~~~~a~l--~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~ 330 (425)
T PRK06084 253 PAAFIGRCRVVPLRNMGAALSPFNAFL--ILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARR 330 (425)
T ss_pred hHHHHHHHHHHHHHhcCCCCCHHHHHH--HHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHH
Confidence 000 0001101111112221 111233456667778888999999999999875 444421
Q ss_pred --CC-CcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHH
Q 038499 409 --TK-RQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 409 --~~-r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~ 482 (609)
.. ..++++|.+.. +. .....+.+.| +.+.+.+.-|...+ .|.......+.++...
T Consensus 331 ~~~g~~gg~~s~~~~~-~~---------------~~~~~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~-- 391 (425)
T PRK06084 331 YMGGKPASILSFGIKG-GQ---------------AAGARFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELE-- 391 (425)
T ss_pred hCCCCcceEEEEEecC-CH---------------HHHHHHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHH--
Confidence 11 35688888865 21 1134555666 45666566554332 1211111122221111
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
..|+.++.||||++.- |.+.+++.|+..+.
T Consensus 392 -------~~gi~~~liR~svGlE----d~~dLi~dl~~Al~ 421 (425)
T PRK06084 392 -------KAGVSRDMVRLSIGIE----HIDDIIADLAQALD 421 (425)
T ss_pred -------hcCCCCCeEEEEeccC----CHHHHHHHHHHHHH
Confidence 2567789999999964 45555555555443
No 218
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=3.3e-19 Score=189.26 Aligned_cols=327 Identities=15% Similarity=0.089 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
...+++++.+++++|.+ .++.++|||. ||..++.+++ +++|| +|+++++.+++...++..
T Consensus 25 ~~~~~fE~~~a~~~g~~---~~~~~~sgt~-Al~~al~~l~--------------~~~gd--eVi~p~~t~~~~~~ai~~ 84 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK---YAVAVSSGTS-ALHLALRALG--------------LGPGD--EVIVPAYTFPATASAILW 84 (363)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESSHHH-HHHHHHHHTT--------------GGTTS--EEEEESSS-THHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCChhH-HHHHHHHhcC--------------CCcCc--eEecCCCcchHHHHHHHH
Confidence 35778899999999975 5677767766 7888888887 68999 799999999999999999
Q ss_pred cCceEEEEecC-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 201 SLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 201 ~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.|++++.++++ .++.+|+++++++|+ +++++|++.| .-|...|+++|.++|++||+++|.|+||+.|...-
T Consensus 85 ~G~~pv~~Di~~~~~~id~~~~~~~i~-----~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~ 156 (363)
T PF01041_consen 85 AGAEPVFVDIDPETLNIDPEALEKAIT-----PKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYK 156 (363)
T ss_dssp TT-EEEEE-BETTTSSB-HHHHHHHHH-----TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EET
T ss_pred hccEEEEEeccCCcCCcCHHHHHHHhc-----cCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeC
Confidence 99999999999 488999999999999 6899888876 55889999999999999999999999999875432
Q ss_pred cCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 280 DVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
+ +..+. .-|+.++|+| |.+....| |+++++++... ++++..... |... .....|..........-..
T Consensus 157 g-~~~G~-~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~-~~~~~~~~~-g~~~------~~~~~~~~~~~~g~n~rm~ 225 (363)
T PF01041_consen 157 G-RPVGS-FGDIAIFSFHPTKIITTGEG-GAVVTNDPELA-ERARALRNH-GRSR------DAFRRYRHELPPGYNFRMS 225 (363)
T ss_dssp T-EETTS-SSSEEEEESSTTSSS-SSS--EEEEESTHHHH-HHHHHHTBT-TEET------SECSTTEESSSS--B-B-B
T ss_pred C-EeccC-CCCceEecCCCCCCCcCCCC-eeEEecHHHHH-HHhhhhhcc-CcCc------cccccccccccCCcccccH
Confidence 2 11111 2288888875 99975555 99999875421 111111111 1100 0000010000000011112
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCC-cce--EEEEeccCCCCCcCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKR-QAI--LSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r-~~~--~~f~~~~~~~~~~~~~~~~~ 434 (609)
++ .|++... +....+.+.++.+++.+++.+.|+.++++..+....... ... +.+.+.+ .
T Consensus 226 ~~----~AAigl~--QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~-~----------- 287 (363)
T PF01041_consen 226 EL----QAAIGLA--QLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD-E----------- 287 (363)
T ss_dssp HH----HHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC-C-----------
T ss_pred HH----HHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc-c-----------
Confidence 22 2332222 223577788888899999999999999987765433221 233 3333332 1
Q ss_pred CCCCCCChHHHHHHHhhhcCcEeccCcc-cCC--hhhhhhc---CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCH
Q 038499 435 ETDKPLHGPFVATLLNDLFGIQARGGCA-CAG--PYGHHLL---DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSN 508 (609)
Q Consensus 435 ~~~~~l~~~~v~~~L~~~~GI~v~~G~~-ca~--p~~~~ll---~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ 508 (609)
...+.+.+.+.|.+. ||.++.... +-. |.-.... .-+-+.++.+. ...+.|.++..+++
T Consensus 288 ---~~~~rd~l~~~L~~~-GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~-----------~r~l~LP~~~~lt~ 352 (363)
T PF01041_consen 288 ---ALADRDELVEALRAR-GIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLS-----------QRLLSLPIHPRLTE 352 (363)
T ss_dssp ---GCSTHHHHHHHHHHT-TBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHH-----------HHEEEEEHSTTSCH
T ss_pred ---ccchHHHHHHHHHHC-CCcccccccCchhhhHHHHhcCccccCCCHHHHHHH-----------hCeEECcCCCCCCH
Confidence 013578899999765 999997651 111 1100110 11224444442 47899999999999
Q ss_pred HHHHHHHHHHH
Q 038499 509 EEFEFTLEALE 519 (609)
Q Consensus 509 eeid~ll~al~ 519 (609)
+|+++++++|+
T Consensus 353 edv~~I~~~ir 363 (363)
T PF01041_consen 353 EDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhccC
Confidence 99999999985
No 219
>PLN02672 methionine S-methyltransferase
Probab=99.85 E-value=7.2e-19 Score=203.03 Aligned_cols=351 Identities=18% Similarity=0.154 Sum_probs=226.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC--CcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE--DAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~--~~vift~sGttaal 153 (609)
+++.|+.+.+. ++|+.+.+++.+.+... +. . .+ ..+.+..+++++++.+|.+.+ ++|+++ +|+++++
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~--~~-s----~g--~pdlr~aLa~~la~~~Gv~~d~~e~IIvt-~Gs~elL 767 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVRQ--NI-S----ES--ETDPRPSILQFIKSNYGFPTDSCTEFVYG-DTSLALF 767 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhhc--CC-C----CC--ChHHHHHHHHHHHHHhCcCCCCCCEEEEe-CCHHHHH
Confidence 67888877554 46778888888766421 11 1 11 234578899999999898654 367776 8999999
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++.++ +++|| .|+++.+.|+.+...++..|++++.|++++ +..+|+++|+++++.
T Consensus 768 ~lll~aL---------------l~pGD--~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~---- 826 (1082)
T PLN02672 768 NKLVLCC---------------VQEGG--TLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET---- 826 (1082)
T ss_pred HHHHHHH---------------cCCCC--EEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc----
Confidence 8888876 37898 799999999999999999999999999974 468899999999872
Q ss_pred CCceEEEEeccc-CccccccC---HHHHHHHHHHhCCeEEEeccccCC-cc--c---ccCCC----CCC---CCccEEEE
Q 038499 232 KRPILGSFSACS-NVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV--E---IDVRS----GQT---DGYDAIFL 294 (609)
Q Consensus 232 ~~~~lv~~s~~s-n~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~~--~---id~~~----~~~---~~~D~v~~ 294 (609)
.+.+++++++|+ ||||.+.+ +++|+++|++||+++|+|++++.- +. + .++.+ ... ...-+++.
T Consensus 827 ~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~ 906 (1082)
T PLN02672 827 VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLG 906 (1082)
T ss_pred CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEe
Confidence 134578888997 99999987 456788899999999999998621 11 1 11111 000 01235666
Q ss_pred cCCCCCCCCC-CcEEEEEech-hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHH
Q 038499 295 STHKFLGGPG-SPGILLMTKA-LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWV 371 (609)
Q Consensus 295 S~hK~lggp~-g~G~L~~~~~-~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~ 371 (609)
|++|.++.|+ .+|+++++++ + ++.+... .. . .+...+.+.. .+++++..
T Consensus 907 SfSKkf~lpGLRIGylIap~~eL--i~~l~~~------------------------~~-~-s~~~~~~q~Aaaaalall~ 958 (1082)
T PLN02672 907 GLSTELLSGGHEFGFLALNDSVL--IDAFHSA------------------------PG-L-SRPHSTLKYTIKKLLGLKN 958 (1082)
T ss_pred CcHHhhccHHHHheeEEeCCHHH--HHHHHHh------------------------hh-h-cCCCcHHHHHHHHHHHHHh
Confidence 9998887553 4999999755 5 2222110 00 0 0111112221 22222110
Q ss_pred -HHh---cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcC-CCCCC-CCCCCCCChHHH
Q 038499 372 -KEY---IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSL-GENTK-TETDKPLHGPFV 445 (609)
Q Consensus 372 -~~~---~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~-~~~~~-~~~~~~l~~~~v 445 (609)
+.. ......++..++.++++.+.|+++ ++.+..+ ..+++.|.... ...... .-+.. ...+..++..++
T Consensus 959 ~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~P----eGGFfLwl~l~-~~l~~~~~~~~~~~~~~~~lds~ef 1032 (1082)
T PLN02672 959 QKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEP----QGGISMVAKPS-AYLGKTVKLKSIDGDTGIKLDSSNI 1032 (1082)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecC----CcEEEEEEEcc-ccccccccccccccccccCCCHHHH
Confidence 000 123445556777888899999887 7777654 34555554322 100000 00000 000112467889
Q ss_pred HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 446 ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 446 ~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
++.|.++.||.+++|..|. .++|+||+++ .++++++..++.|+...+
T Consensus 1033 ae~LLee~GVaV~PGs~FG-----------------------------~~g~~RIsfa--~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1033 REAILKSTGLCINSSSWTG-----------------------------IPGYCRFSFA--LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHcCCEEEecCcccC-----------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 9989887899999986443 1489999998 478899999999987543
No 220
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=2.8e-19 Score=192.25 Aligned_cols=315 Identities=16% Similarity=0.100 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+++......+++++.+++++|++. ++++++|+ +++..++..+ +++|| .|+++...|+.+
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~~---~l~~~sG~-~Ai~~al~al---------------~~~GD--~Vl~~~~~Y~~~ 128 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTEA---AYCTASGM-SAISSVLLQL---------------CSSGG--HVVASNTLYGGT 128 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCe---EEEEccHH-HHHHHHHHHH---------------hCCCC--EEEEcCCcHHHH
Confidence 344445667889999999999863 45564666 5677666655 47899 688888888776
Q ss_pred HHHH-----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 195 LLSW-----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~-----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
...+ +..|++++.++.+ |+++++++++. .++++|++++++||||.+.|+++|+++||+||+++|+|
T Consensus 129 ~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~----~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD 199 (418)
T PLN02242 129 HALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVP----GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD 199 (418)
T ss_pred HHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCc----CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE
Confidence 5544 2368888877653 89999999972 25999999999999999999999999999999999999
Q ss_pred ccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 270 FAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 270 ~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
++++... .+...+ +.|+++.|++|+++|++. .|+++.++++ +..+.....+
T Consensus 200 ea~~~~~--~~~~~~---g~divv~S~SK~l~g~g~~~gG~iv~~~~l--i~~l~~~~~~-------------------- 252 (418)
T PLN02242 200 NTFAPMV--LSPARL---GADVVVHSISKFISGGADIIAGAVCGPAEL--VNSMMDLHHG-------------------- 252 (418)
T ss_pred CCCCccC--CCHHHc---CCcEEEEeCccccCCCCCceEEEEEcCHHH--HHHHHHHhhh--------------------
Confidence 9986332 222222 689999999999998764 4888888877 3332211000
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCC--C--------------CCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNT--S--------------TKR 411 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~--~--------------~~r 411 (609)
.....|.+...+. +++... .....+...++.++.++++.+.|+++ +++++.|. + ...
T Consensus 253 --~~~~~g~~~~~~~--A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~ 325 (418)
T PLN02242 253 --ALMLLGPTMNPKV--AFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGF 325 (418)
T ss_pred --hhhccCCCCCHHH--HHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCc
Confidence 0011122211111 111111 11234445567788899999999988 47777553 1 023
Q ss_pred cceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhc----CcEeccCcccCC---hhhhhhcCCChhHHHHHHH
Q 038499 412 QAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLF----GIQARGGCACAG---PYGHHLLDLDEAQSYQIRS 484 (609)
Q Consensus 412 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~----GI~v~~G~~ca~---p~~~~ll~i~~~~~~~~~~ 484 (609)
.++++|.+.. . -....+++.| +.+ .+.+..|...+- |..+....+..+...
T Consensus 326 g~~~sf~l~~-~----------------~~~~~f~~~l-~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~---- 383 (418)
T PLN02242 326 GGLLCLDMDT-E----------------ERANRLMRYL-QNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKA---- 383 (418)
T ss_pred eeEEEEEECC-H----------------HHHHHHHHHh-hcccccceeeecCCCCCceeeCCCccccccCCHHHHH----
Confidence 4677777743 1 1233455555 222 445555543331 222222223322211
Q ss_pred HHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 485 AIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 485 ~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
..|+.++.||||++.-. +.+.+++-|+..++
T Consensus 384 -----~~gi~~~liRlsvGlE~---~~~dli~dl~~al~ 414 (418)
T PLN02242 384 -----AAGISPGLVRMSVGYTG---TLEQRWSQFEKALS 414 (418)
T ss_pred -----hcCCCCCeEEEEecCCC---CHHHHHHHHHHHHH
Confidence 15667899999999642 24455555555443
No 221
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=1.5e-19 Score=191.81 Aligned_cols=302 Identities=14% Similarity=0.072 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (609)
.....+++.++++.|++ +++++++| ++|+..++..+ +++|| .|++++..|+.....
T Consensus 50 Pt~~~lE~~lA~l~g~~---~~~~~~sG-~~Ai~~al~al---------------l~~GD--~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA---GCYLYPSG-LAAVTNSILAF---------------VKAGD--HVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEECcH-HHHHHHHHHHh---------------cCCCC--EEEEcCCCcHHHHHHHHH
Confidence 34677899999999974 45666455 55677766655 47899 688888888765532
Q ss_pred -HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 198 -WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 198 -~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
....|+++..++.+ +.++++++++ ++|++|++++++|++|.+.|+++|+++||++|+++++|++++.|.
T Consensus 109 ~~~~~gi~v~~~d~~-----~~e~l~~~i~-----~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~ 178 (377)
T TIGR01324 109 VLKRMGVDITYYDPL-----IGEDIATLIQ-----PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGL 178 (377)
T ss_pred HHHhcCcEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 24468888877543 2378888887 689999999999999999999999999999999999999999886
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
..-.+ . .++|+++.|.|||++|+.+ .|+++.+++. ++.+... +...
T Consensus 179 ~~~pl-~---~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~--~~~l~~~--------------------------~~~~ 226 (377)
T TIGR01324 179 LFKPL-E---HGVDISIQAGTKYLVGHSDIMIGTVVANART--WDQLREH--------------------------SYLM 226 (377)
T ss_pred ccCcc-c---cCceEEEecCceeccCCCCceEEEEEeCHHH--HHHHHHH--------------------------HHHh
Confidence 63222 2 2889999999999999865 5888887765 2222100 0011
Q ss_pred CC-hhHHH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCC--C-----------CCCcceEEE
Q 038499 355 GT-PQVIQ--MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNT--S-----------TKRQAILSF 417 (609)
Q Consensus 355 gt-p~i~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~--~-----------~~r~~~~~f 417 (609)
|+ .+... .+..++. -.....++..+.+..+.+.|++.|.+ +++-|. + ....++++|
T Consensus 227 G~~l~p~~a~~~~rgl~-------tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~ 299 (377)
T TIGR01324 227 GQMVDADDAYTTLRGLR-------TLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSF 299 (377)
T ss_pred CCCCCHHHHHHHHhhhh-------hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEE
Confidence 21 11111 1111111 12333456666777788888888877 455442 1 123568888
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh-hhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY-GHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~-~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.+.. .. ......+.+.| +.+++.+.-|...+--. .+. .+... . + .. .++.++
T Consensus 300 ~l~~-~~--------------~~~~~~~~~~l-~~~~~~~slG~~~sl~~~~~~--~~~~~--~--~--~~---~~~~~~ 352 (377)
T TIGR01324 300 VLQR-LT--------------QKQVHAFLDHL-QLFGLGYSWGGYESLALCNQP--ELGHR--P--N--IK---RNLEGP 352 (377)
T ss_pred EECC-CC--------------HHHHHHHHHhC-CcceEeccCCCccceeecCCC--CCCHH--H--H--Hh---ccCCCC
Confidence 8854 11 01245677777 56788877775422000 000 01100 0 1 11 233458
Q ss_pred EEEEecCCCCCHHHHHHHHHHHH
Q 038499 497 WTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~ 519 (609)
.||||++.-..++=++.+.++|+
T Consensus 353 liR~svGlE~~~dl~~dl~~al~ 375 (377)
T TIGR01324 353 LIRVHIGLENVDDLKADLKAGFE 375 (377)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHh
Confidence 99999997544444444444443
No 222
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.85 E-value=1.5e-19 Score=190.05 Aligned_cols=276 Identities=16% Similarity=0.128 Sum_probs=184.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA 203 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (609)
.++++.+++++|..+.++|+++ +|++++|..+... +++|+ |++..+.|+.+...++..|+
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~-~Gs~e~i~~l~~~----------------~~~g~---v~v~~P~y~~y~~~~~~~g~ 115 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPV-AGSQAAIRALPAL----------------LPRGR---VGIAPLAYSEYAPAFARHGH 115 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEEC-cCHHHHHHHHHHh----------------cCCCe---EEEcCCCcHHHHHHHHHCCC
Confidence 5789999999999753488887 8999999876543 25665 67788899999889999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHH---HHHhCCeEEEeccccCCccccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARL---LHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~l---a~~~g~~vivD~A~~~~~~~id 280 (609)
+++.++.+. + .+. ..++++++++|+||||.+.+.+++.++ |.++++++|+|+++.-......
T Consensus 116 ~~~~v~~~~------~----~~~-----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s 180 (339)
T PRK06959 116 RVVPLDEAA------D----TLP-----AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAAS 180 (339)
T ss_pred EEEeecccc------h----hcc-----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCccc
Confidence 999988653 1 222 245789999999999999997776655 5578999999999764321122
Q ss_pred CCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
+.......--+++.|++|.+|-| ..+|++++++++ ++.+.... ...+.+.+
T Consensus 181 ~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l--i~~l~~~~--------------------------~~~~vs~~ 232 (339)
T PRK06959 181 LAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPAL--LAALRDAL--------------------------GAWTVSGP 232 (339)
T ss_pred chhccCCCCEEEEecChhhcCCcchheEEEecCHHH--HHHHHHhc--------------------------CCCCCcHH
Confidence 22211001136778999999844 459999999887 33331110 00111122
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
.+. ++.+ .+.+....+..+++.++.++++.+.|+++ ++++.. .+++.+.-.+
T Consensus 233 ~q~--a~~~-~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~------~~~f~~~~~~------------------ 284 (339)
T PRK06959 233 ARH--AVRA-AFADAAWQAAMRERLAADGARLAALLRAH-GFAVHA------TPLFSWTDDP------------------ 284 (339)
T ss_pred HHH--HHHH-HhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCccC------cceEEEEeCC------------------
Confidence 221 1222 22222234566777788888999999887 665542 1344433322
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
+...+.+.|.+ .||.++ .|. .++++||+++ .+.+|+++++++|+
T Consensus 285 -~~~~l~~~l~~-~GI~vr---~~~-----------------------------~~~~lRisi~--~~~~e~~~l~~al~ 328 (339)
T PRK06959 285 -RAAALHAALAR-RGIWTR---YFA-----------------------------PPPSVRFGLP--ADEAEWQRLEDALA 328 (339)
T ss_pred -CHHHHHHHHHh-CCeEEE---ECC-----------------------------CCCeEEEECC--CCHHHHHHHHHHHH
Confidence 34678888866 599998 232 1479999983 28899999999999
Q ss_pred HHHHhcc
Q 038499 520 FIAIYGQ 526 (609)
Q Consensus 520 ~v~~~~~ 526 (609)
.+.+...
T Consensus 329 ~~~~~~~ 335 (339)
T PRK06959 329 ECVPTLA 335 (339)
T ss_pred HHHHHHh
Confidence 8877654
No 223
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.85 E-value=2e-19 Score=190.73 Aligned_cols=309 Identities=15% Similarity=0.058 Sum_probs=193.2
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG---GGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g---~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
+.++.+.+++.+... ... |....+..++++++.+++.+.+| .+++ +|++| +|++.++..+...+.
T Consensus 34 ~~~~~~~~~~~~~~~-~~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~it-~G~~~~i~~~~~~l~--- 101 (357)
T TIGR03539 34 PVPPLIRAALAAAAD-APG------YPQTWGTPELREAIVDWLERRRGVPGLDPT-AVLPV-IGTKELVAWLPTLLG--- 101 (357)
T ss_pred CCCHHHHHHHHHHHh-hCC------CCcccCCHHHHHHHHHHHHHhcCCCCCCcC-eEEEc-cChHHHHHHHHHHHc---
Confidence 445666777655432 111 11112234455555555555544 5565 89888 899989988877663
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
+++|| .|+++.+.|+.+....+..|++++.++ ++++ +.. ++++++++++++|
T Consensus 102 -----------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~----l~~----~~~~~v~~~~p~N 153 (357)
T TIGR03539 102 -----------LGPGD--TVVIPELAYPTYEVGALLAGATPVAAD-------DPTE----LDP----VGPDLIWLNSPGN 153 (357)
T ss_pred -----------CCCCC--EEEECCCCcHHHHHHHHhcCCEEeccC-------Chhh----cCc----cCccEEEEeCCCC
Confidence 37888 799999999999888888899988774 2332 222 4789999999999
Q ss_pred ccccccC---HHHHHHHHHHhCCeEEEeccccC-CcccccCCCCCC------CCccEEEEcCCCCCCCCC-CcEEEEEec
Q 038499 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASG-PYVEIDVRSGQT------DGYDAIFLSTHKFLGGPG-SPGILLMTK 313 (609)
Q Consensus 245 ~TG~~~d---l~~I~~la~~~g~~vivD~A~~~-~~~~id~~~~~~------~~~D~v~~S~hK~lggp~-g~G~L~~~~ 313 (609)
|||.+.+ +++|.++|++||+++++|+++.. .+....+..+.. ..-.+++.|++|.+|.|+ .+|++++++
T Consensus 154 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~ 233 (357)
T TIGR03539 154 PTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP 233 (357)
T ss_pred CcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH
Confidence 9999987 45688999999999999999752 111111111100 012477789999987553 389999888
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
++ +..+.... .....+++.+.+.+ +.++ +.+....+.++++.++.++++.+
T Consensus 234 ~~--~~~~~~~~------------------------~~~~~~~~~~~q~~--~~~~-l~~~~~~~~~~~~~~~~~~~~~~ 284 (357)
T TIGR03539 234 AL--VAELLTVR------------------------KHAGLMVPAPVQAA--MVAA-LGDDGHVAEQKARYAARRAQLKP 284 (357)
T ss_pred HH--HHHHHHHH------------------------hhcccCCCHHHHHH--HHHH-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 77 22221110 00001122222221 1122 22222345566666777888888
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.|++. ++.+..+ ..+++.+...+ .+..++.+.|. +.||.+++|..+. +.
T Consensus 285 ~L~~~-g~~~~~p----~~~~~~~~~~~------------------~~~~~~~~~l~-~~gV~v~pg~~f~-~~------ 333 (357)
T TIGR03539 285 ALEKA-GFRIDHS----EAGLYLWATRG------------------EDAWDTVDRLA-ELGILVAPGDFYG-PA------ 333 (357)
T ss_pred HHHHc-CCCCcCC----CccEEEEEECC------------------CCHHHHHHHHH-hCCEEECCccccC-CC------
Confidence 88775 6665543 34565555544 13567778785 4699999887543 10
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
.++++||+++. ++++++..++.|
T Consensus 334 --------------------~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 334 --------------------GSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --------------------CCCeEEEEecC--CHHHHHHHHHhh
Confidence 14799999974 678888888765
No 224
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=1.2e-19 Score=192.49 Aligned_cols=291 Identities=17% Similarity=0.107 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW--- 198 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--- 198 (609)
...++++.++++. .+ +.+++ ++|+. ++..++..+ +++|| .|+++...|+.....+
T Consensus 52 ~~~~Le~~lA~l~--~~-~~v~~-~sG~~-Ai~~~l~al---------------l~~Gd--~Vl~~~~~y~~~~~~~~~~ 109 (366)
T PRK07582 52 TWRALEAALGELE--GA-EALVF-PSGMA-AITAVLRAL---------------LRPGD--TVVVPADGYYQVRALAREY 109 (366)
T ss_pred cHHHHHHHHHHHc--CC-CEEEE-CCHHH-HHHHHHHHh---------------cCCCC--EEEEeCCCcHhHHHHHHHH
Confidence 3677889999998 22 25555 58875 677776655 47898 6888877776654432
Q ss_pred -HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC--
Q 038499 199 -RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP-- 275 (609)
Q Consensus 199 -~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~-- 275 (609)
...|++++.++.++++ + .+. ++++++++++++||||.+.|+++|+++||++|+++++|++++.+
T Consensus 110 l~~~G~~v~~v~~~~~~----~----~~~-----~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~ 176 (366)
T PRK07582 110 LAPLGVTVREAPTAGMA----E----AAL-----AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLG 176 (366)
T ss_pred HhcCeEEEEEECCCChH----H----Hhc-----cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccc
Confidence 3469999999875321 1 223 47899999999999999999999999999999999999997543
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
..+++ + ++|+++.|+|||++|+.| .|+++.+ +++ .+.+... ...
T Consensus 177 ~~p~~---~---g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l--~~~l~~~-------------------------~~~ 223 (366)
T PRK07582 177 QRPLE---L---GADLVVASDTKALTGHSDLLLGYVAGRDPEL--MAAVERW-------------------------RLL 223 (366)
T ss_pred cCchh---c---CCcEEEecccccccCCCCeeEEEEEcCcHHH--HHHHHHH-------------------------HHH
Confidence 33332 2 679999999999999877 5888875 444 2222110 001
Q ss_pred cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--CCC-----------CcceEEEE
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--STK-----------RQAILSFN 418 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~~~-----------r~~~~~f~ 418 (609)
...+++.... .+... ...-.+...++..+++..+.+.|+++|.+. |.-|. +.+ ..++++|.
T Consensus 224 ~g~~~~~~~a---~l~~r--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~ 298 (366)
T PRK07582 224 AGAIPGPFEA---WLAHR--SLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFE 298 (366)
T ss_pred hCCCCCHHHH---HHHHh--ccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEE
Confidence 1122222111 11111 111234555777788999999999988875 33221 112 56788888
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
+.. ...+.+.|.. .++... +.+..+. +.+. ...+.. | .++.++.|
T Consensus 299 ~~~--------------------~~~~~~~~~~-l~~~~~-~~s~G~~--~sl~---------~~~~~~-~-~~~~~~li 343 (366)
T PRK07582 299 LAD--------------------AAAAERFVAA-SRLVVA-ATSFGGV--HTSA---------DRRARW-G-DAVPEGFV 343 (366)
T ss_pred eCC--------------------HHHHHHHHHh-CCccee-cccCCCc--cchh---------hhHHHc-C-CCCCCCeE
Confidence 753 3456666643 355432 1111110 0010 001111 1 22457899
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q 038499 499 RISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 499 Rls~~~~~t~eeid~ll~al~~ 520 (609)
|+|+|+.+.++.++.+.++|+.
T Consensus 344 R~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 344 RLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred EEEeccCCHHHHHHHHHHHHhh
Confidence 9999999998889998888864
No 225
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=2.1e-19 Score=192.59 Aligned_cols=307 Identities=16% Similarity=0.144 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (609)
...+++++.++++.|.+ +.+ ++++|+.+ +..++..+ +++|| +|+++...|......
T Consensus 70 p~~~~le~~lA~l~g~~--~al-~~~sG~~A-i~~~l~al---------------l~~Gd--~Vl~~~~~~~~t~~~~~~ 128 (403)
T PRK07810 70 PTVSMFEERLRLIEGAE--ACF-ATASGMSA-VFTALGAL---------------LGAGD--RLVAARSLFGSCFVVCNE 128 (403)
T ss_pred chHHHHHHHHHHHhCCC--cEE-EECChHHH-HHHHHHHH---------------hCCCC--EEEEccCCcchHHHHHHH
Confidence 33678999999999976 244 44588875 55454444 47898 688888777665433
Q ss_pred -HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 198 -WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 198 -~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.+..|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.|.
T Consensus 129 ~~~~~G~~v~~vd~~-----d~~~l~~ai~-----~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~ 198 (403)
T PRK07810 129 ILPRWGVETVFVDGE-----DLSQWEEALS-----VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPL 198 (403)
T ss_pred HHHHcCcEEEEECCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 34579999999753 8999999998 689999999999999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCC-CCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGS-FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~-~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
....+ . .++|++++|+||+++|.+. .|+++.+++. +.. +... .+..
T Consensus 199 ~~~~~-~---~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~--~~~~l~~~-------------------------~~~~ 247 (403)
T PRK07810 199 LQRGL-P---LGADVVVYSGTKHIDGQGRVLGGAILGDREY--IDGPVQKL-------------------------MRHT 247 (403)
T ss_pred cCChh-h---cCCcEEEccCCceecCCcCceeEEEEeChHH--HHHHHHHH-------------------------HHHh
Confidence 53332 2 2789999999999997653 4888888775 211 1100 0000
Q ss_pred CCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--CC-----------CCcceEEEE
Q 038499 354 GGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--ST-----------KRQAILSFN 418 (609)
Q Consensus 354 ~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~~-----------~r~~~~~f~ 418 (609)
... +++.+ ++.+ ....-.+...++..+.+.++.+.|+++|.+. |+-|. +. ...+.++|.
T Consensus 248 g~~~s~~~a----~l~l--~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~ 321 (403)
T PRK07810 248 GPALSAFNA----WVLL--KGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFE 321 (403)
T ss_pred CCCCCHHHH----HHHH--hccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 111 11111 1111 1222355666777788888889999998875 44331 11 235678887
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---hhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---PYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
+.. .... + .-....+++.| +.+.+.+.-|+..+- |.......+..+... ..|+.+
T Consensus 322 l~~-~~~~----------~-~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~ 379 (403)
T PRK07810 322 LDA-PEDA----------A-KKRAFEVLDKL-RVIDISNNLGDAKSLITHPATTTHRAMGPEGRA---------AIGLGD 379 (403)
T ss_pred EcC-CCCc----------C-HHHHHHHHHhC-CceEEeccCCCCcceeeCCCccccccCCHHHHH---------hcCCCC
Confidence 754 2100 0 00123455555 456666565543321 211111122221111 145668
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.+|||++. |+++.+++.|+..
T Consensus 380 ~lvR~svGl----E~~~dli~dl~~A 401 (403)
T PRK07810 380 GVVRLSVGL----EDTDDLIADLDRA 401 (403)
T ss_pred CeEEEEecc----CCHHHHHHHHHHh
Confidence 999999996 4455555555443
No 226
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=2.1e-19 Score=192.10 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH---
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--- 196 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--- 196 (609)
.....++++.++++.|+.. .++++ +|+ +|+..++..+ +++|| .|+++...|+++..
T Consensus 46 ~p~~~~lE~~la~leg~~~--~v~~s-sG~-~Ai~~~l~al---------------l~~Gd--~Vv~~~~~y~~t~~~~~ 104 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVG--TVCFA-TGM-AAIAAVFLTL---------------LRAGD--HLVSSQFLFGNTNSLFG 104 (397)
T ss_pred CHHHHHHHHHHHHHhCCCe--EEEeC-CHH-HHHHHHHHHH---------------cCCCC--EEEECCCccccHHHHHH
Confidence 4457789999999999874 56665 785 5677776654 47999 68889888876543
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.+...|++++.++.. |+++|+++++ ++|++|++++++||||.+.|+++|+++||++|+++++|++++.|.
T Consensus 105 ~l~~~G~~v~~v~~~-----d~e~l~~~l~-----~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~ 174 (397)
T PRK05939 105 TLRGLGVEVTMVDAT-----DVQNVAAAIR-----PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW 174 (397)
T ss_pred HHHhcCCEEEEECCC-----CHHHHHHhCC-----CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc
Confidence 455679999999863 8999999998 689999999999999999999999999999999999999987764
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEe
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMT 312 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~ 312 (609)
. ++.... ++|+++.|+||+++|++. +|.+++.
T Consensus 175 ~-~~~~~~---gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 175 L-FRPKDV---GASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred c-cCcccc---CCEEEEecCeecccCCCCeEEEEEec
Confidence 2 333332 789999999999998754 5665554
No 227
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.85 E-value=3.7e-19 Score=193.32 Aligned_cols=342 Identities=15% Similarity=0.069 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
..++|+.+++++|.+ .+++| +|+++++..++.++ ++||| |+++.+.|.++....+..|
T Consensus 80 ~~~Lreaia~~~~~~---~vv~t-~ggt~A~~~~~~al---------------l~pGD---Vii~~p~~~~~~~~i~~~G 137 (460)
T PRK13238 80 YYRLEDAVKDIFGYP---YTIPT-HQGRAAEQILFPVL---------------IKKGD---VVPSNYHFDTTRAHIELNG 137 (460)
T ss_pred HHHHHHHHHHHhCCC---cEEEC-CCHHHHHHHHHHHh---------------CCCCC---EEccCCcccchHHHHHHcC
Confidence 567888999999974 68888 66677788877765 58999 6666666666666677889
Q ss_pred ceEEEEecCC----------CCCCCHHHHHHHHhhhccCCCceEEEEecccCccc-cccC---HHHHHHHHHHhCCeEEE
Q 038499 203 AEVVEIGLDD----------DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTG-IYSD---TRSIARLLHQYGGFACF 268 (609)
Q Consensus 203 ~~vv~v~~~~----------~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG-~~~d---l~~I~~la~~~g~~viv 268 (609)
++++.+++++ .|.+|+++|+++|++.. .++++++++++++|+|| .+.+ +++|.++|++||+++|.
T Consensus 138 ~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~-~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~ 216 (460)
T PRK13238 138 ATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG-AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVI 216 (460)
T ss_pred CEEEEEeccccccccccccccCCcCHHHHHHHHhhcC-CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999853 35599999999998421 13689999999999998 6765 57899999999999999
Q ss_pred eccccCC-----------cccccCCCC---CCCCccEEEEcCCCCCCCCCCcEEEEEec-hhhccCCCCCCccCCCceEe
Q 038499 269 DFAASGP-----------YVEIDVRSG---QTDGYDAIFLSTHKFLGGPGSPGILLMTK-ALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 269 D~A~~~~-----------~~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~ 333 (609)
|+|+... +...++... .....|++++|++|.+.+|.| |+++.++ ++ ...++......
T Consensus 217 Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l--~~~~~~~~~~~----- 288 (460)
T PRK13238 217 DAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDL--FTECRTLCILY----- 288 (460)
T ss_pred ECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHH--HHHhhhccccc-----
Confidence 9987542 222222110 012479999999999888886 8999884 55 23332221100
Q ss_pred ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA 413 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~ 413 (609)
+.....|..+.. ..+|++..+.+....+.+..+ .+.++++.+.|.+. |+.+..+. .+
T Consensus 289 ---------------~g~~t~~g~~~~--~~~Ala~~l~e~~~~~~~~~~-~~~~~~l~~~L~~~-G~~~~~p~----Gg 345 (460)
T PRK13238 289 ---------------EGFPTYGGLAGR--DMEALAVGLYEGMDEDYLAYR-IGQVEYLGEGLEEA-GVPIQTPA----GG 345 (460)
T ss_pred ---------------CCcccccCcHHH--HHHHHHhhHHHhhChHHHHHH-HHHHHHHHHHHHHC-CCCeEccC----Cc
Confidence 000012222222 122222222222222333333 33468888889876 88888763 24
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
++.|.-.. ... ....+.......++..|.++.||.+.++.++.-+.- ...+.. . --
T Consensus 346 ~~v~~d~~-~~~-------~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~-~~~~~~--~-------------~~ 401 (460)
T PRK13238 346 HAVFVDAG-KFL-------PHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRD-PKTGEQ--L-------------PA 401 (460)
T ss_pred eEEEEEch-hcC-------CCCCCCCCchHHHHHHHHHHcCeeeecccceecccC-CCCccc--c-------------CC
Confidence 44443222 100 000111123467888888889999987765543210 000100 0 00
Q ss_pred CCcEEEEecCC-CCCHHHHHHHHHHHHHHHHhcccccCCCcccccCCceee
Q 038499 494 KPGWTRISFPY-YMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKTGTWCF 543 (609)
Q Consensus 494 ~~g~iRls~~~-~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~~~~w~~ 543 (609)
...++|++++- --|.++++++.++|+.+.++.. .++-|.|-+..-.-||
T Consensus 402 ~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~r~ 451 (460)
T PRK13238 402 PAELLRLAIPRRVYTQSHMDYVAEALKAVKENRE-SIKGLRFTYEPPVLRH 451 (460)
T ss_pred ccceEEEecccccCCHHHHHHHHHHHHHHHHhHh-hcCCeEEeecCcccee
Confidence 14899999972 2389999999999999986544 3446666555444444
No 228
>PRK04311 selenocysteine synthase; Provisional
Probab=99.85 E-value=1.4e-18 Score=187.75 Aligned_cols=205 Identities=19% Similarity=0.185 Sum_probs=149.7
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
..+|.++.+.++.++.+.+++.+.+.. |.|.... ...+ .....+..+++.+++++|++. . ++++||+ +++..+
T Consensus 86 g~v~~tNlg~s~l~~~v~eav~~~~~~-~~~le~~-l~~g-~~g~r~~~~e~~lA~l~Gae~--a-~vv~sgt-aAl~l~ 158 (464)
T PRK04311 86 GVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYD-LATG-KRGSRDRALAALLCALTGAED--A-LVVNNNA-AAVLLA 158 (464)
T ss_pred ccEEeccCCCCCCCHHHHHHHHHHHhc-ccccccc-hhhc-ccchHHHHHHHHHHHHhCCCe--E-EEECCHH-HHHHHH
Confidence 567888888889999999999887654 3333211 1111 123446789999999999862 4 4554666 567766
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch----HH--HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN----LL--SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~----~~--~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+..+ .+|| +|++++.+|+.+ .. .++..|+++++++.+ +..++++++++|+
T Consensus 159 l~~l----------------~~Gd--eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~---- 214 (464)
T PRK04311 159 LNAL----------------AAGK--EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAIN---- 214 (464)
T ss_pred HHHh----------------CCCC--EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcC----
Confidence 6543 6788 799998877632 22 245679999999764 3457999999998
Q ss_pred CCCceEEEEecccCc--cc--cccCHHHHHHHHHHhCCeEEEeccccC---------CcccccCCCCCCCCccEEEEcCC
Q 038499 231 AKRPILGSFSACSNV--TG--IYSDTRSIARLLHQYGGFACFDFAASG---------PYVEIDVRSGQTDGYDAIFLSTH 297 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~--TG--~~~dl~~I~~la~~~g~~vivD~A~~~---------~~~~id~~~~~~~~~D~v~~S~h 297 (609)
++|+++++.|++|+ +| ...|+++|+++||+||+++++|.+++. +..+ ++......|+|++++|+|
T Consensus 215 -~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg~ 292 (464)
T PRK04311 215 -ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSGD 292 (464)
T ss_pred -ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecCc
Confidence 68999999999997 45 568999999999999999999996322 1122 222211238999999999
Q ss_pred CCCCCCCCcEEEEEechh
Q 038499 298 KFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 298 K~lggp~g~G~L~~~~~~ 315 (609)
||+|||. .|++++++++
T Consensus 293 K~LgGp~-~G~i~g~~~l 309 (464)
T PRK04311 293 KLLGGPQ-AGIIVGKKEL 309 (464)
T ss_pred ccccCCc-eEEEEEcHHH
Confidence 9999997 6999999988
No 229
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.85 E-value=1.6e-19 Score=190.88 Aligned_cols=298 Identities=14% Similarity=0.107 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.++++.|.+ .++.+ +|.++|+..++.. +++|| +|+++...|......+..
T Consensus 54 p~~~~le~~lA~leg~~---~~v~~-~sG~aAi~~~l~~----------------l~~GD--~VI~~~~~yg~~~~~~~~ 111 (364)
T PRK07269 54 PTRAKLEETLAAIESAD---YALAT-SSGMSAIVLAFSV----------------FPVGS--KVVAVRDLYGGSFRWFNQ 111 (364)
T ss_pred ccHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHH----------------hCCCC--EEEEecCCcCchHHHHHH
Confidence 34678999999999864 56666 4555577776643 36899 688888777765533322
Q ss_pred c----CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 S----LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ~----G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
. +.++. ...|+++++++++ ++|++|++++|+||||.+.|+++|+++||++|+++++|++++.++
T Consensus 112 ~~~~~~~~~~-------~~~d~~~l~~~i~-----~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~ 179 (364)
T PRK07269 112 QEKEGRFHFT-------YANTEEELIAAIE-----EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPI 179 (364)
T ss_pred HHhcCcEEEE-------ecCCHHHHHHhcC-----cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 1 22211 1248999999998 689999999999999999999999999999999999999977665
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
....+. .++|++++|+||+++|++. .|+++.+++.. .+++... +...
T Consensus 180 ~~~pl~----~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l-~~~~~~~--------------------------~~~~ 228 (364)
T PRK07269 180 YQRPIE----LGADIVLHSATKYLSGHNDVLAGVVVTNDLEL-YEKLFYN--------------------------LNTT 228 (364)
T ss_pred cCCchh----hCCcEEEecCceeccCCCcccceEEEeCcHHH-HHHHHHH--------------------------HHHh
Confidence 432221 2789999999999998775 58877754331 1222100 0001
Q ss_pred C-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCC
Q 038499 355 G-TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 355 g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~ 432 (609)
| ..+-. .+.+... .....+...++.++++.++.+.|+.+|.+. ++-| ...+.++|.+.. ..
T Consensus 229 G~~~s~~---~a~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~yp---g~gg~~sf~~~~-~~-------- 291 (364)
T PRK07269 229 GAVLSPF---DSYLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYT---GKGGMISFKVAD-ET-------- 291 (364)
T ss_pred CCCCCHH---HHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCC---CcCcEEEEEECC-HH--------
Confidence 1 11111 1221111 222456677788889999999999999874 4434 356888998854 11
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
....+...| +.+.+.++-|..++ .|.......+..+.. . -.|+.++.||||++.-
T Consensus 292 --------~~~~f~~~l-~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r--------~-~~Gi~~~liRlsvGlE---- 349 (364)
T PRK07269 292 --------RIPHILNSL-KVFTFAESLGGVESLITYPTTQTHADIPAEVR--------H-SYGLTDDLLRLSIGIE---- 349 (364)
T ss_pred --------HHHHHHHhC-CcceEccCCCCcCeEeeCCcccccccCCHHHH--------H-hcCCCCCeEEEEeccC----
Confidence 233444555 34555555554332 122111112221110 0 1456789999999964
Q ss_pred HHHHHHHHHHHHH
Q 038499 510 EFEFTLEALEFIA 522 (609)
Q Consensus 510 eid~ll~al~~v~ 522 (609)
+++.+++-|++.+
T Consensus 350 ~~~dli~dl~~al 362 (364)
T PRK07269 350 DARDLIADLKQAL 362 (364)
T ss_pred CHHHHHHHHHHHh
Confidence 4555555555443
No 230
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.85 E-value=4.6e-19 Score=188.17 Aligned_cols=230 Identities=17% Similarity=0.196 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.++++.|++. .++ +++|+ +++..++.. +++|| .|+++...|++....+
T Consensus 51 ~pt~~~le~~la~l~g~~~--~~~-~~sG~-~ai~~~~~l----------------l~~Gd--~Vl~~~~~y~~t~~~~~ 108 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQ--GFA-CSSGM-AAIQLVMSL----------------FRSGD--ELIVSSDLYGGTYRLFE 108 (366)
T ss_pred CchHHHHHHHHHHHhCCCc--EEE-EcCHH-HHHHHHHHH----------------hCCCC--EEEEecCCcCcHHHHHH
Confidence 3446789999999999964 344 44665 467766543 36888 6888888888754433
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
+..|++++.++.. |+++++++++ ++++++++++|+||+|.+.|+++|+++||+||+++++|++++.+
T Consensus 109 ~~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 109 EHWKKWNVRFVYVNTA-----SLKAIEQAIT-----PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred HHhhccCceEEEECCC-----CHHHHHHhcc-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 4579999998753 8999999998 68999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.....+. .+.|+++.|++|+++|+.+ .|+++.+ +++ .+.+...... .
T Consensus 179 ~~~~p~~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l--~~~~~~~~~~------------------------~ 228 (366)
T PRK08247 179 VLQRPLE----EGADIVIHSATKYLGGHNDVLAGLVVAKGQEL--CERLAYYQNA------------------------A 228 (366)
T ss_pred cccCchh----cCCcEEEeecceeccCCCceeeeEEecChHHH--HHHHHHHHHh------------------------c
Confidence 4332221 2789999999999998754 5777776 344 1222111000 0
Q ss_pred cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEE-eCCCCCCCcceEEEEec
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKI-LGNTSTKRQAILSFNIH 420 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v-~~~~~~~r~~~~~f~~~ 420 (609)
.....+..+.+ ++. .....+...++.++.++.+.+.|+++|++.. ..| ...++++|.+.
T Consensus 229 g~~~s~~~a~l--~~~----~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P---~~gg~~sf~~~ 288 (366)
T PRK08247 229 GAVLSPFDSWL--LIR----GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYP---GRGGMLSFRLQ 288 (366)
T ss_pred CCCCChHHHHH--HHh----ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecC---CcCcEEEEEEC
Confidence 00111111111 100 1112344455668888999999999999874 333 24678888653
No 231
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.84 E-value=3.3e-18 Score=184.47 Aligned_cols=205 Identities=17% Similarity=0.155 Sum_probs=150.5
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
..+|+++.+.++.++.+.+++.+.+..+ .|.... ...+. ....+..+++.+++++|++. .++| +||+. ++..+
T Consensus 81 g~v~~tNlg~s~l~~~vieAv~~~~~~y-~~l~~~-l~~g~-~g~r~~~le~~lA~l~gae~--alvv-~sg~a-Ai~l~ 153 (454)
T TIGR00474 81 GVVLHTNLGRAPLAEEAIEAVTDAARGY-SNLEYD-LETGK-RGSRYSHVEGLLCELTGAED--ALVV-NNNAA-AVLLA 153 (454)
T ss_pred CcEEeccCCCCCCCHHHHHHHHHHHhcc-cchhcc-ccccc-cchHHHHHHHHHHHHhCCCc--EEEE-CCHHH-HHHHH
Confidence 4688888888899999999998877643 444311 11111 22447889999999999974 4555 47766 56666
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc----hHH--HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS----NLL--SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s----~~~--~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+.. +.+|| +|+++..+|.. +.. .++..|+++++++.+ +..++++++++|+
T Consensus 154 l~~----------------l~~Gd--eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~---- 209 (454)
T TIGR00474 154 LNT----------------LAKGK--EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAIT---- 209 (454)
T ss_pred HHH----------------hCCcC--EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcC----
Confidence 544 36888 79999887642 222 345679999999764 3458999999998
Q ss_pred CCCceEEEEecccCcc--c--cccCHHHHHHHHHHhCCeEEEecccc---------CCcccccCCCCCCCCccEEEEcCC
Q 038499 231 AKRPILGSFSACSNVT--G--IYSDTRSIARLLHQYGGFACFDFAAS---------GPYVEIDVRSGQTDGYDAIFLSTH 297 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~T--G--~~~dl~~I~~la~~~g~~vivD~A~~---------~~~~~id~~~~~~~~~D~v~~S~h 297 (609)
++|+++++.+++|++ | .+.|+++|+++||+||+++++|.+.+ .++.+.-... ...|+|++++|+|
T Consensus 210 -~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~-~~~GaDiv~fSg~ 287 (454)
T TIGR00474 210 -ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEV-IAAGVDLVTFSGD 287 (454)
T ss_pred -cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccH-hHcCCCEEEecCc
Confidence 689999999999984 6 47899999999999999999997632 1222221111 1238999999999
Q ss_pred CCCCCCCCcEEEEEechh
Q 038499 298 KFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 298 K~lggp~g~G~L~~~~~~ 315 (609)
||+|||. .|++++++++
T Consensus 288 K~LgGp~-~G~i~g~~~~ 304 (454)
T TIGR00474 288 KLLGGPQ-AGIIVGKKEL 304 (454)
T ss_pred cccCCCe-EEEEEECHHH
Confidence 9999997 6999999988
No 232
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=9.7e-19 Score=187.42 Aligned_cols=336 Identities=15% Similarity=0.110 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (609)
....++++.++++.|+.. .++ ++||+. |+..++..+ +++|| +|++++..|.+....
T Consensus 61 Ptv~~lE~~la~leg~~~--av~-~~SG~a-Ai~~al~al---------------l~~GD--~VI~~~~~Y~~T~~~~~~ 119 (432)
T PRK06702 61 PTLAAFEQKLAELEGGVG--AVA-TASGQA-AIMLAVLNI---------------CSSGD--HLLCSSTVYGGTFNLFGV 119 (432)
T ss_pred cHHHHHHHHHHHHhCCCc--EEE-ECCHHH-HHHHHHHHh---------------cCCCC--EEEECCCchHHHHHHHHH
Confidence 346788999999999863 344 546666 677666554 47999 799999999866554
Q ss_pred -HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 198 -WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 198 -~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
....|++++++.. .+|+++++++|+ ++||+|++.+++||++.+.|+++|+++||+||+++++|++.+.|+
T Consensus 120 ~l~~~Gi~v~~vd~----~~d~~~l~~~I~-----~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~ 190 (432)
T PRK06702 120 SLRKLGIDVTFFNP----NLTADEIVALAN-----DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY 190 (432)
T ss_pred HHHHCCCEEEEECC----CCCHHHHHHhCC-----cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh
Confidence 5678999999964 368999999998 689999999999999999999999999999999999999987553
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccC--C--CceEeecccccccccccc--cc
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCG--G--GTVNYVNGFNEKDTLYLE--DI 348 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~g--g--g~v~~~~~~~~~~~~~~~--~~ 348 (609)
. .+++ ..|+|+++.|.+|+++|..+ .|+++.....-......+...- . ..+.+.. +.....++. ..
T Consensus 191 ~---~~pl-~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 264 (432)
T PRK06702 191 L---CQAF-EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQ--NFGAAAYIVKARV 264 (432)
T ss_pred h---CChh-hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhh--ccchhhHHHHHHH
Confidence 3 2221 12899999999999999864 4555434332000000000000 0 0000000 000000000 00
Q ss_pred cccccCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C------------CCCc
Q 038499 349 EERESGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S------------TKRQ 412 (609)
Q Consensus 349 ~~r~~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~------------~~r~ 412 (609)
......|+ .+.. .+.+... .....+.+.++..+++..+.+.|+++|.++ |.-|. + ....
T Consensus 265 ~~~~~~g~~~sp~---~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~g 339 (432)
T PRK06702 265 QLLRDYGNCMSPF---NAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGAS 339 (432)
T ss_pred HHHHHccCCCCHH---HHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCc
Confidence 00111122 1111 1111111 122356666777889999999999998875 43332 1 0134
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
++++|.+.. +. -....+++.| +.+.+.+.-|..-+ .|.......+..+...
T Consensus 340 g~~sf~l~~-~~---------------~~~~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~--------- 393 (432)
T PRK06702 340 GVLTFGIKG-GL---------------EAAKEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQR--------- 393 (432)
T ss_pred eEEEEEecC-CH---------------HHHHHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHH---------
Confidence 688888864 21 1234555656 56666666664211 1322222223322211
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
..|+.++.||||++. |+.+.+++-|+..++.+..
T Consensus 394 ~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~~~~ 427 (432)
T PRK06702 394 LAGVTSDLIRLSVGI----EDVSDIIADLEAALVGGKQ 427 (432)
T ss_pred hcCCCCCeEEEEecc----CCHHHHHHHHHHHHhcCcc
Confidence 246678999999995 5677778888877776653
No 233
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.84 E-value=9e-19 Score=183.59 Aligned_cols=273 Identities=17% Similarity=0.120 Sum_probs=182.1
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA 203 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (609)
.++|+.|++++|. ++|++| +|++++|..++. +.+|| .|++..+.|+.+...++..|+
T Consensus 52 ~~Lr~~ia~~~~~---~~I~it-~Gs~~al~~~~~-----------------~~~gd--~v~v~~P~y~~~~~~~~~~g~ 108 (330)
T PRK05664 52 DGLEAAARAYYGA---PQLLPV-AGSQAAIQALPR-----------------LRAPG--RVGVLSPCYAEHAHAWRRAGH 108 (330)
T ss_pred HHHHHHHHHHhCC---CCEEEC-cCHHHHHHHHHH-----------------ccCCC--EEEEcCCChHHHHHHHHHcCC
Confidence 4678999999986 378887 899999987742 25788 699999999999999999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHH---HHHHHHHhCCeEEEeccccCCccccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRS---IARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~---I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
+++.|+.+ ++++++. +++++++++|+||||.+.+.++ |+++|+++|+++|+|+++........
T Consensus 109 ~~~~v~~~--------~~~~~~~------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s 174 (330)
T PRK05664 109 QVRELDEA--------EVEAALD------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHS 174 (330)
T ss_pred eEEEechh--------hHhhhhc------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCccc
Confidence 99999753 4555554 5778899999999999998654 56667889999999999753321112
Q ss_pred CCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
+..+....--+++.|++|.+|.| ..+|++++++++ ++.+.... ...+....
T Consensus 175 ~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l--~~~~~~~~--------------------------~~~~~~~~ 226 (330)
T PRK05664 175 LAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPAL--LRALAELL--------------------------GPWTVSGP 226 (330)
T ss_pred ccccccCCCEEEEeeccccccCCCcceEEEEeCHHH--HHHHHHhc--------------------------CCCCCCHH
Confidence 22221112237788999999845 469999999887 33321110 00011112
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
.+. ++ ...+.+....+.++++..+.++++.+.|+++ +++..+ ...++.+...+
T Consensus 227 ~~~--~~-~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~-----~~~~f~~~~~~------------------ 279 (330)
T PRK05664 227 TRW--LA-QAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPAG-----GCALFQWVRTE------------------ 279 (330)
T ss_pred HHH--HH-HHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-----CcceEEEEecC------------------
Confidence 221 11 1122222223456677777788888888876 443211 12233333222
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
+..++.+.|.+ .||.++. |. .++++||+++. +.+++++++++|+
T Consensus 280 -~~~~~~~~l~~-~gi~v~~---f~-----------------------------~~~~iRis~~~--~~~~~~~l~~al~ 323 (330)
T PRK05664 280 -DAAALHEFLAR-RGILTRL---FE-----------------------------QPASLRFGLPA--DEADWARLDQALL 323 (330)
T ss_pred -CHHHHHHHHHH-CCeEEEE---CC-----------------------------CCCeEEEECCC--CHHHHHHHHHHHH
Confidence 35678888855 6999972 21 14799999974 6889999999999
Q ss_pred HHHHh
Q 038499 520 FIAIY 524 (609)
Q Consensus 520 ~v~~~ 524 (609)
.+.++
T Consensus 324 ~~~~~ 328 (330)
T PRK05664 324 AYRKE 328 (330)
T ss_pred HHHhh
Confidence 88655
No 234
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.84 E-value=2.4e-18 Score=179.37 Aligned_cols=338 Identities=14% Similarity=0.109 Sum_probs=227.5
Q ss_pred CCChHHHHHHHHHhhcCCccC--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 87 GRSLRYIENYIINNVLPFYGN--THTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
+..|+.|++++++.+..+.+. .-.+.++.+..+.+++.++++.++++++.+.+.+|+|..+|+|.++.++..-+
T Consensus 13 a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl---- 88 (364)
T PRK12462 13 GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF---- 88 (364)
T ss_pred cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc----
Confidence 346889999999888765321 11123556778899999999999999999765578777677887888776654
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCC----CCCCCHHHHHHHHhhhccCCCceEEE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDD----DGLLDIEALRSKLELYKDAKRPILGS 238 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~----~g~ld~e~L~~al~~~~~~~~~~lv~ 238 (609)
+.+|++..-++. ..+.+.. .-++..| ++..+.... ...++++++ .+. ++.+.+.
T Consensus 89 -----------l~~g~~~~~~~~-tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-----~d~~~v~ 148 (364)
T PRK12462 89 -----------SRPGAAAPEYVT-TGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-----ARAPFRH 148 (364)
T ss_pred -----------CCCCCcEEEEEe-CCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-----CCCcEEE
Confidence 467875220222 2222222 2233455 555553211 234556654 222 3577899
Q ss_pred EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 239 ~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
+++..+.||+..| ++.+.+++++++|.+.+++..++|+.++ |+++++.+|.+| |.|++++++++++ +
T Consensus 149 ~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~-----dvi~agsQKnlg-P~Gltvvivs~~a--l 215 (364)
T PRK12462 149 YVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY-----GMVYAHAQKNLG-PAGVTVAIIRRAL--L 215 (364)
T ss_pred EccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc-----cEEEeeccccCC-CCceEEEEECHHH--H
Confidence 9999999999987 3333469999999999999999999864 999999999998 9899999999999 5
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHh
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEY-IGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~-~g~~~i~~~~~~l~~~~~~~L 395 (609)
++..+..+ .. ..|...........||++..+.. .++.+.. ++ .|++.+.++.++.++.+++.+
T Consensus 216 ~~~~~~~p--~~-----------ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~-~e~GGl~~~~~r~~~ka~~ly~~i 281 (364)
T PRK12462 216 ERVPDTLP--PM-----------LDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR-DEIGGVHAMRDINARKAAMLYATL 281 (364)
T ss_pred hhccccCC--ch-----------hhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH-HhccCHHHHHHHHHHHHHHHHHHH
Confidence 55433211 01 01111112223345888877654 4444443 34 399999999999999999999
Q ss_pred CCCCceEEeCCC-CCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 396 LPNQNIKILGNT-STKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 396 ~~~p~i~v~~~~-~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
.+.+++....-. +..+.-+++|.+.+ .. + ...+.+.+ ++.|+.--.| |+.
T Consensus 282 d~~~~~~~~~~~~~~RS~mnv~f~~~~-~~---------------l-~~~f~~~a-~~~gl~~lkG--------hr~--- 332 (364)
T PRK12462 282 DALNEVIDCHAHRAARSTMNVAFRFRQ-PR---------------L-DTLFKEQS-TEAGFCGLSG--------HRS--- 332 (364)
T ss_pred HhCCCcccCCCChhhcCcceEEEEcCC-HH---------------H-HHHHHHHH-HHCCCccccC--------Ccc---
Confidence 998766543322 22344567777655 21 2 34555555 3458765432 321
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
-|.+|+|+-..++.|+++.|++.+++..++
T Consensus 333 --------------------vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 333 --------------------IGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred --------------------cCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 367999999899999999999999987654
No 235
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=2.3e-18 Score=186.21 Aligned_cols=349 Identities=14% Similarity=0.033 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
..++++.+++++|.+ .+++++|||.+ +..++.++.... + ....+++|| .|++++++|+++..++...|
T Consensus 65 ~~~fe~~lA~~~g~~---~~v~~~sGt~a-l~~aL~al~~~~---~---~~~~~~pGd--~VIv~~~t~~a~~~~v~~~G 132 (438)
T PRK15407 65 NDAFEKKLAEFLGVR---YALLVNSGSSA-NLLAFSALTSPK---L---GDRALKPGD--EVITVAAGFPTTVNPIIQNG 132 (438)
T ss_pred HHHHHHHHHHHhCCC---eEEEECCHHHH-HHHHHHHHhhcc---c---cccCCCCCC--EEEECCCCcHHHHHHHHHcC
Confidence 668899999999985 57777566664 555544431000 0 000157888 79999999999999999999
Q ss_pred ceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccC
Q 038499 203 AEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV 281 (609)
Q Consensus 203 ~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~ 281 (609)
++++.++++. ++.+|+++++++++ +++++|++++ ++|...|+++|.++|++||+++|+|++|+.|...-+.
T Consensus 133 ~~pv~vdvd~~~~~id~~~le~~i~-----~~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~ 204 (438)
T PRK15407 133 LVPVFVDVELPTYNIDASLLEAAVS-----PKTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR 204 (438)
T ss_pred CEEEEEecCCCcCCcCHHHHHHHcC-----cCCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCe
Confidence 9999999874 67899999999997 6899988887 4788899999999999999999999999988665432
Q ss_pred CCCCCCCccEEEEcCC--CCCCCCCCcEEEEEechhhccCCCCCCccCCCceE---ee-c-----cccc---cccccccc
Q 038499 282 RSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVN---YV-N-----GFNE---KDTLYLED 347 (609)
Q Consensus 282 ~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~---~~-~-----~~~~---~~~~~~~~ 347 (609)
..+ ..| |+.++|+| |-+....| |+++++++.. ..........|... .. . .+.. .....++.
T Consensus 205 ~~G-~~g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (438)
T PRK15407 205 MTG-TFG-DIATLSFYPAHHITMGEG-GAVFTNDPLL--KKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDH 279 (438)
T ss_pred eee-ccC-ceEEEeCCCCCCccccCc-eEEEECCHHH--HHHHHHHHHhCcccccccccccccccccccccccccccccc
Confidence 221 113 77777766 65654444 9999987662 21111111111100 00 0 0000 00000000
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEe-CCCCCCCcceEEEEeccCCCCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKIL-GNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~-~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
.-.-...|...-+.-+.|++... +....+.+.++.+++++++.+.|+.++++.++ .........++.|.+.- .
T Consensus 280 ~~~~~~~G~n~rmsel~AAig~~--qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~-~--- 353 (438)
T PRK15407 280 KYTYSHLGYNLKITDMQAAIGLA--QLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITV-K--- 353 (438)
T ss_pred cccccccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEE-C---
Confidence 00000123221122223333322 22346778888889999999999988753322 21111122333333332 1
Q ss_pred cCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc--cC-Chhhhhh--c-CCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 427 SLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA--CA-GPYGHHL--L-DLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~--ca-~p~~~~l--l-~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
.....+.+++.+.|.+ .||.++.... |. .|+-... . .-+.+.++.+ ....+-+
T Consensus 354 ---------~~~~~~Rd~l~~~L~~-~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~-----------~~~~l~L 412 (438)
T PRK15407 354 ---------EDAGFTRVELVKYLEE-NKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRI-----------MNDTFWI 412 (438)
T ss_pred ---------CcCCCCHHHHHHHHHH-CCCCccccCCCccccChhhhhcCCCCCCCChHHHHH-----------HhCeEEe
Confidence 0112457899999976 5998875321 11 1111100 0 1122333333 2467888
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++..+|++|+++++++|++++.
T Consensus 413 P~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 413 GVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999999874
No 236
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.83 E-value=9e-18 Score=180.87 Aligned_cols=342 Identities=15% Similarity=0.147 Sum_probs=205.3
Q ss_pred CccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++.+..|+ -|+|..++ |-..+.|.+++.+.+... . +.... -......++.+.+++++|.+
T Consensus 32 G~~~~d~~g~---~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~-~--~~~~~----~~~~~~~~l~~~l~~~~~~~-- 99 (401)
T PRK00854 32 GVWVWDTDGN---RYLDCLSAYSAVNQGHCHPKILAAMVEQAGRL-T--LTSRA----FRNDQLAPLYEELAALTGSH-- 99 (401)
T ss_pred eCEEEECCCC---EEEEcCcchhhccCCCCCHHHHHHHHHHHhhc-c--ccccc----cCCHHHHHHHHHHHhhCCCC--
Confidence 4445444553 37775332 344788999998888653 1 11100 11345678889999998863
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC-------------ceEE
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL-------------AEVV 206 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv 206 (609)
.++|+.||+.+ +..++.++-.. . . . ....++|.. .|++....||+........+ ..+.
T Consensus 100 -~~~~~~SGs~A-~e~al~~a~~~-~---~-~-~~g~~~~~~-~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (401)
T PRK00854 100 -KVLPMNSGAEA-VETAIKAVRKW-G---Y-E-VKGVPEGQA-EIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFR 170 (401)
T ss_pred -EEEEeCCcHHH-HHHHHHHHHHH-H---H-h-ccCCCCCCc-eEEEECCCcCCccHHHHhccCCccccccCCCCCCCeE
Confidence 68888788886 33333332100 0 0 0 000123322 45555555554332222111 2334
Q ss_pred EEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCcccccC
Q 038499 207 EIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVEIDV 281 (609)
Q Consensus 207 ~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~id~ 281 (609)
.++. .|+++|++++. +++++|++++++|++|.+.| +++|.++|++||+++|+|++++ .+.....+
T Consensus 171 ~~~~-----~d~~~le~~i~-----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~ 240 (401)
T PRK00854 171 VVPF-----GDAEALEAAIT-----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL 240 (401)
T ss_pred EeCC-----CCHHHHHHHhC-----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh
Confidence 4432 38999999997 68999999999999999987 9999999999999999999987 44332111
Q ss_pred --CCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 282 --RSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 282 --~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
... .-..|+++++ |+++|.. .+|+++.++++ ++.+.+...+ . ...+.|.
T Consensus 241 ~~~~~-g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~--~~~l~~~~~~-~----------------------t~~~~~~ 292 (401)
T PRK00854 241 AEEHE-GIEADVTLIG--KALSGGFYPVSAVLSNSEV--LGVLKPGQHG-S----------------------TFGGNPL 292 (401)
T ss_pred HHhhc-CCCCCEEEec--ccccCCccCeEEEEEcHHH--HhcccCCCCC-C----------------------CCCcCHH
Confidence 111 0145888875 9997653 47999999888 4444321100 0 0022333
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
......+++... +. +.+.++.+++.+++.+.|+++.. ...... .....++.+.+.+ +.
T Consensus 293 ~~aa~~a~L~~l--~~---~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~g~g~~~~i~~~~-~~-------------- 350 (401)
T PRK00854 293 ACAVARAALKVL--TE---EGMIENAAEMGAYFLEGLRSIRS-NIVREV-RGRGLMLAVELEP-EA-------------- 350 (401)
T ss_pred HHHHHHHHHHHH--HH---cCHHHHHHHHHHHHHHHHHhhcc-CceEEE-eccceEEEEEEec-Cc--------------
Confidence 333334444432 21 23556777788888888877532 211110 1233445554433 11
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
.....+++.|.+ .||.+.+. .++++|+++++.++++|+++++++|
T Consensus 351 -~~~~~~~~~L~~-~GV~v~~~---------------------------------~~~~lR~~p~~~~t~e~i~~~i~~l 395 (401)
T PRK00854 351 -GGARQYCEALKE-RGLLAKDT---------------------------------HDHTIRLAPPLVITREQVDWALEQI 395 (401)
T ss_pred -hhHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEeCCcccCHHHHHHHHHHH
Confidence 245678888876 59988621 1378999999999999999999999
Q ss_pred HHHHH
Q 038499 519 EFIAI 523 (609)
Q Consensus 519 ~~v~~ 523 (609)
++++.
T Consensus 396 ~~~l~ 400 (401)
T PRK00854 396 AKVLA 400 (401)
T ss_pred HHHhh
Confidence 98764
No 237
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.83 E-value=5.1e-18 Score=183.45 Aligned_cols=349 Identities=17% Similarity=0.162 Sum_probs=207.5
Q ss_pred ccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 038499 67 AEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED 140 (609)
Q Consensus 67 ~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~ 140 (609)
.++....|+ -|+|..+ .|-.++.|.+++.+.+... + + +..+........++++.+++++|.+.+
T Consensus 28 ~~~~d~dG~---~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~-~---~~~~~~~~~~~~~l~~~l~~~~~~~~~- 97 (413)
T cd00610 28 AYLYDVDGN---RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--T-H---FSLGFFYNEPAVELAELLLALTPEGLD- 97 (413)
T ss_pred CEEEeCCCC---EEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--c-C---ccCcccCCHHHHHHHHHHHHhCCCCCC-
Confidence 334444453 3777654 3446788999998887432 1 1 111112356678899999999997555
Q ss_pred cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcC------------ceEEE
Q 038499 141 AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSL------------AEVVE 207 (609)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G------------~~vv~ 207 (609)
.++|+.+|+. ++..++.++. .+.+++ .|++....||+. .......+ .+++.
T Consensus 98 ~v~~~~sgse-a~~~al~~~~-------------~~~~~~--~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T cd00610 98 KVFFVNSGTE-AVEAALKLAR-------------AYTGRK--KIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLH 161 (413)
T ss_pred EEEEcCcHHH-HHHHHHHHHH-------------HHcCCC--eEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEE
Confidence 8999855555 5655555431 023455 455555555554 33333222 24666
Q ss_pred EecCC------CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC-c
Q 038499 208 IGLDD------DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-Y 276 (609)
Q Consensus 208 v~~~~------~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~-~ 276 (609)
++.+. +...|+++|++.++++ .+++++++++..++++|.+.| +++|.++|++||+++++|++++.. .
T Consensus 162 ~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~ 239 (413)
T cd00610 162 VPYPYRYRPPAELADDLEALEEALEEH--PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGR 239 (413)
T ss_pred eCCCccccchhhHHHHHHHHHHHHhcC--CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 76653 2334889999998742 136778888888889999987 899999999999999999998742 1
Q ss_pred cc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC--CCCccCCCceEeecccccccccccccccccc
Q 038499 277 VE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF--PPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 277 ~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.. ....... ...|++++ +|+++++..+|+++.++++ ++.+ ..... ..
T Consensus 240 ~g~~~~~~~~~-~~~d~~t~--sK~l~~g~~~g~~~~~~~~--~~~~~~~~~~~------------------------~~ 290 (413)
T cd00610 240 TGKMFAFEHFG-VEPDIVTL--GKGLGGGLPLGAVLGREEI--MDAFPAGPGLH------------------------GG 290 (413)
T ss_pred CcchhhHhhcC-CCCCeEEE--cccccCccccEEEEEcHHH--HHhhccCCCCC------------------------CC
Confidence 11 1111110 13476654 5999976678999999887 3333 11100 00
Q ss_pred c-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 353 S-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 353 ~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
. .+.+.....+.++++++ +. +.+.++.+++.+++.+.|+.+... .+.... ....+++++.+.. ....
T Consensus 291 t~~~~~~~~~a~~a~l~~l--~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~---- 359 (413)
T cd00610 291 TFGGNPLACAAALAVLEVL--EE---EGLLENAAELGEYLRERLRELAEKHPLVGDV-RGRGLMIGIELVK-DRAT---- 359 (413)
T ss_pred CCCcCHHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEe-ecCceEEEEEEec-CCCc----
Confidence 1 12222222233444443 21 345567777777777777654210 111110 1244666666644 1000
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
+ .........+.+.|.+ .||.+.++. ++.+|+++++.+|++|
T Consensus 360 ---~-~~~~~~~~~~~~~l~~-~gv~v~~~~---------------------------------~~~lR~~~~~~~t~~~ 401 (413)
T cd00610 360 ---K-PPDKELAAKIIKAALE-RGLLLRPSG---------------------------------GNVIRLLPPLIITEEE 401 (413)
T ss_pred ---C-CcchHHHHHHHHHHHH-CCeEEeecC---------------------------------CCEEEEECCCcCCHHH
Confidence 0 0000234667788866 599988542 2679999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 511 FEFTLEALEFI 521 (609)
Q Consensus 511 id~ll~al~~v 521 (609)
+++++++|+.+
T Consensus 402 i~~~~~~l~~~ 412 (413)
T cd00610 402 IDEGLDALDEA 412 (413)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 238
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=1.2e-17 Score=179.80 Aligned_cols=337 Identities=16% Similarity=0.156 Sum_probs=205.0
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..|+ -|+|..++ |+.++.+.+++.+.+... +.... .+ ......++.++++++++.+.
T Consensus 33 ~G~~~~d~dg~---~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~-~~~~~-~~-----~~~~~~~la~~l~~~~~~~~ 102 (398)
T PRK03244 33 EGAVVWDVDGK---EYLDLLGGIAVNALGHAHPAVVEAVTRQLATL-GHVSN-LF-----ATEPQIALAERLVELLGAPE 102 (398)
T ss_pred eecEEEECCCC---EEEECCcCHhhccCCCCCHHHHHHHHHHHHhc-cCccC-cc-----CCHHHHHHHHHHHHhCCCCC
Confidence 34455555554 37887653 555788999998887653 11111 11 11223578889999988543
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc------------eE
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA------------EV 205 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~------------~v 205 (609)
.++++|+.+|+. ++..++++.. .+|+..+|.+.+ .||... ......|. ++
T Consensus 103 ~~~v~~~~sgse-a~~~al~~~~---------------~~g~~~ii~~~~-~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (398)
T PRK03244 103 GGRVFFCNSGAE-ANEAAFKLAR---------------LTGRTKIVAAEG-GFHGRTMGALALTGQPAKRAPFEPLPGGV 165 (398)
T ss_pred CCEEEEeCchHH-HHHHHHHHHH---------------HHCCCeEEEECC-CcCCccHHHHhccCCcccccCCCCCCCCc
Confidence 238999855555 5666655432 244332455545 555443 32322222 23
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc--
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE-- 278 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~-- 278 (609)
..++. .|+++|++++. +++++++++.++|++|.+.| +++|.++|++||+++|+|++++. +...
T Consensus 166 ~~~~~-----~d~~~l~~~~~-----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~ 235 (398)
T PRK03244 166 EHVPY-----GDVDALAAAVD-----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAW 235 (398)
T ss_pred eEeCC-----CCHHHHHHhhc-----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchH
Confidence 33332 37899999886 57899999999999999988 88999999999999999999763 2111
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+.+... .-..|++++ +|++++...+|++++++++ .+.+.+...+ ..+ .+.|.
T Consensus 236 ~~~~~~-~~~pDi~t~--sK~l~~G~~ig~~~~~~~~--~~~~~~~~~~----------------------~t~-~~~~~ 287 (398)
T PRK03244 236 FAHQHD-GVTPDVVTL--AKGLGGGLPIGACLAFGPA--ADLLTPGLHG----------------------STF-GGNPV 287 (398)
T ss_pred Hhhhhh-CCCCCEEEE--chhhhCCcccEEEEEcHHH--HhhccCCCCc----------------------CCC-CCCHH
Confidence 111111 113577655 5999866668999999887 3433221100 000 12232
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
....+.+.+..+ ..+.+.++.+++.+++++.|+++ +..+.... .....++.+.+..
T Consensus 288 ~~aaa~a~l~~~-----~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v-~g~g~~~~i~~~~----------------- 343 (398)
T PRK03244 288 ACAAALAVLDTI-----ASEGLLENAERLGEQLRAGIEAL-GHPLVDHV-RGRGLLLGIVLTA----------------- 343 (398)
T ss_pred HHHHHHHHHHHH-----HhccHHHHHHHHHHHHHHHHHhc-CCCceeeE-eeccEEEEEEEec-----------------
Confidence 222223333322 22345677788888899988875 22111110 0123344444432
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
-....+.+.|.+ .||.+++. .++.+|++++..+|++|+++++++|
T Consensus 344 -~~~~~~~~~l~~-~Gv~~~~~---------------------------------~~~~iR~~p~~~~t~~~i~~~~~~l 388 (398)
T PRK03244 344 -PVAKAVEAAARE-AGFLVNAV---------------------------------APDVIRLAPPLIITDAQVDAFVAAL 388 (398)
T ss_pred -cHHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEECCCcCCHHHHHHHHHHH
Confidence 135677788866 59998741 1368999999999999999999999
Q ss_pred HHHHHhc
Q 038499 519 EFIAIYG 525 (609)
Q Consensus 519 ~~v~~~~ 525 (609)
++++.+.
T Consensus 389 ~~~l~~~ 395 (398)
T PRK03244 389 PAILDAA 395 (398)
T ss_pred HHHHHhc
Confidence 9988653
No 239
>PRK08354 putative aminotransferase; Provisional
Probab=99.83 E-value=1.1e-17 Score=174.07 Aligned_cols=184 Identities=14% Similarity=0.054 Sum_probs=134.0
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.++.++.+.+...|+.+.+++.+.+.. .+. + . ....+++++++.+|. +|++| +|+++++..+
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~----~~~--y-p------~~~~l~~~ia~~~~~----~I~vt-~G~~~al~~~ 70 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI----SGR--Y-T------YYEWLEEEFSKLFGE----PIVIT-AGITEALYLI 70 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH----hhc--C-C------ChHHHHHHHHHHHCC----CEEEC-CCHHHHHHHH
Confidence 466777665555567788888765431 111 1 1 124578899999983 68887 8999999877
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+..+ .+|| .|+++.+.|+.+...++..|++++.++ +|++.|+++++ ++++
T Consensus 71 ~~~~----------------~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~------~~~~ 120 (311)
T PRK08354 71 GILA----------------LRDR--KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE------RNSV 120 (311)
T ss_pred HHhh----------------CCCC--eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc------CCCE
Confidence 6543 4788 699999999999999999999998764 57889988775 3678
Q ss_pred EEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEE
Q 038499 237 GSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLM 311 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~ 311 (609)
+++++|+||||.+.+. ++|+++|++||+++|+|+++......- ... .....+++.|++|.+|-| ..+|++++
T Consensus 121 vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~--~~~-~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 121 VFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP--ESP-EGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred EEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc--ccc-CCCcEEEEeccHhhcCCccceeeeeee
Confidence 8999999999999885 556777889999999999975321110 011 013357888999999844 35899998
No 240
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=3.8e-18 Score=184.16 Aligned_cols=159 Identities=19% Similarity=0.186 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
....++++.++++.|.+ ..+++++|+. ++..++..+ +++|| .|+++...|++....+
T Consensus 57 p~~~~le~~lA~l~g~~---~~v~~~sG~~-Ai~~al~~l---------------~~~Gd--~Vl~~~~~y~~t~~~~~~ 115 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGV---AALAVASGQA-AITYAILNL---------------AQAGD--NIVSSSYLYGGTYNLFKH 115 (418)
T ss_pred hhHHHHHHHHHHHhCCC---eEEEEccHHH-HHHHHHHHH---------------hCCCC--EEEEECCCcHHHHHHHHH
Confidence 44678999999999974 3466657776 455555444 37888 6888888887665443
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
...|++++.++.+ |+++++++++ ++++++++++++||||.+.|+++|+++||+||+++|+|++++.+.
T Consensus 116 ~~~~~G~~v~~v~~~-----d~~~l~~~l~-----~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~ 185 (418)
T TIGR01326 116 TLKRLGIEVRFVDPD-----DPEEFEKAID-----ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPY 185 (418)
T ss_pred HHHHcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhh
Confidence 4579999999853 8999999997 689999999999999999999999999999999999999988664
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEech
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTKA 314 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~~ 314 (609)
....+ . .++|+++.|++|+++|++. +|++++++.
T Consensus 186 ~~~~l-~---~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 186 LCRPI-D---HGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred cCCch-h---cCCeEEEECccccccCCccceEEEEEecc
Confidence 32222 1 2689999999999997643 788888653
No 241
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.6e-18 Score=185.28 Aligned_cols=161 Identities=16% Similarity=0.059 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS- 197 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~- 197 (609)
.....+++++.++++.|.+ +++++ +|+++++..++.++ +++|| +|+++++.|..+...
T Consensus 63 ~~pt~~~Le~~lA~l~g~~---~~l~~-~sgt~Ai~~~l~al---------------~~~GD--~Vl~~~~~y~~~~~~~ 121 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGR---HALLQ-PSGLAAISLVYFGL---------------VKAGD--DVLIPDNAYGPNRDHG 121 (394)
T ss_pred CCHHHHHHHHHHHHHhCCC---eEEEe-ccHHHHHHHHHHHH---------------hCCCC--EEEEecCCcccHHHHH
Confidence 3444678999999999974 67887 66677888887766 47999 799999999987643
Q ss_pred ---HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 198 ---WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 198 ---~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
....|++++.++.. +.++++++++ ++|++|++++++||+|.+.|+++|+++||++|+++++|++++.
T Consensus 122 ~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~-----~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 122 EWLARDFGITVRFYDPL-----IGAGIADLIQ-----PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred HHHHHhcCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc
Confidence 34579999988643 4578888887 6899999999999999999999999999999999999999987
Q ss_pred CcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEech
Q 038499 275 PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKA 314 (609)
Q Consensus 275 ~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~ 314 (609)
|... ++.. .|+|+++.|++|+++|..+ .|+++++++
T Consensus 192 ~~~~---~~l~-~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~ 229 (394)
T PRK07050 192 GLAF---KPFE-HGVDISVQALTKYQSGGSDVLMGATITADA 229 (394)
T ss_pred cccc---CHHH-cCCeEEEEECCceecCCCCeeEEEEEECCH
Confidence 7542 2211 2789999999999987654 576776543
No 242
>PRK10534 L-threonine aldolase; Provisional
Probab=99.82 E-value=1.6e-18 Score=181.86 Aligned_cols=309 Identities=14% Similarity=0.100 Sum_probs=184.1
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
+++.+.+++.+..... . .| .......++++.|++++|.++. + ++++|+.+.+..+. ++
T Consensus 12 p~~~~~~a~~~~~~~~----~--~Y----~~~~~~~~L~~~la~~~g~~~~--~-v~~~g~~a~~~~l~-~~-------- 69 (333)
T PRK10534 12 PSRAMLEAMMAAPVGD----D--VY----GDDPTVNALQDYAAELSGKEAA--L-FLPTGTQANLVALL-SH-------- 69 (333)
T ss_pred CCHHHHHHHHhccCCC----c--cc----CCCHHHHHHHHHHHHHhCCCeE--E-EeCchHHHHHHHHH-Hh--------
Confidence 5567777776533211 1 11 1233467899999999998643 4 55466655333333 32
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHH--HHHcC-ceEEEEecCCCCCCCHHHHHHHHhhhcc-CCCceEEEEecccC
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLS--WRQSL-AEVVEIGLDDDGLLDIEALRSKLELYKD-AKRPILGSFSACSN 244 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--~~~~G-~~vv~v~~~~~g~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn 244 (609)
+.+|| .|+++.+.|.+.... ....+ ++++.++.+.++.+|+++|+++++.... ..+++++++++++
T Consensus 70 -------~~~gd--~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~- 139 (333)
T PRK10534 70 -------CERGE--EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH- 139 (333)
T ss_pred -------cCCCC--eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC-
Confidence 36888 577776666533221 23333 7888888877889999999999863100 0158899998654
Q ss_pred ccccccCHHH---HHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCCCCcE-EEEEechhhc
Q 038499 245 VTGIYSDTRS---IARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPGSPG-ILLMTKALYQ 317 (609)
Q Consensus 245 ~TG~~~dl~~---I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G-~L~~~~~~~~ 317 (609)
||.+.|.++ |+++|++||+++++|+|+..... ....... ....|.++.|++|.+|.+ .| +++.++++
T Consensus 140 -~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~-- 213 (333)
T PRK10534 140 -NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEI-TQYCDSFTICLSKGLGTP--VGSLLVGNRDY-- 213 (333)
T ss_pred -CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHH-HhcCCEEEEEeEcCCCCc--ccceEEcCHHH--
Confidence 699988765 56788999999999998653211 0111000 113466677899999866 46 67778877
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.+.... . ...+..+..+.. .+++.. +++ ..+.+. +..+.++++.+.|+
T Consensus 214 i~~~~~~~------------------------~-~~~~~~~~~~~~~a~~~~~-l~~--~~~~~~-~~~~~r~~l~~~L~ 264 (333)
T PRK10534 214 IKRARRWR------------------------K-MTGGGMRQAGILAAAGLYA-LKH--NVARLQ-EDHDNAAWLAEQLR 264 (333)
T ss_pred HHHHHHHH------------------------H-HhCCchhhHHHHHHHHHHH-HHh--hHHHHH-HHHHHHHHHHHHHH
Confidence 33321110 0 001111222221 222221 211 122233 34446778899998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
++ |++++.+ . .++.+...+ + .+..++.+.|.+ .||.+++|
T Consensus 265 ~~-g~~~~~~----~-~nfv~~~~~-~----------------~~~~~~~~~l~~-~gi~v~~~---------------- 304 (333)
T PRK10534 265 EA-GADVMRQ----D-TNMLFVRVG-E----------------EQAAALGEYMRE-RNVLINAS---------------- 304 (333)
T ss_pred hC-CCccCCC----C-ceEEEEECC-c----------------hhHHHHHHHHHH-cCeeecCC----------------
Confidence 87 7777643 2 344444333 1 135678887755 69999843
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
..+|++.++..|++|+++++++|+.++.
T Consensus 305 -------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 305 -------------------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred -------------------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 1368877666799999999999987653
No 243
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.4e-17 Score=166.72 Aligned_cols=335 Identities=13% Similarity=0.045 Sum_probs=225.6
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC------CCCcEEEeCChHHHHHHHHHHHhc
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG------QEDAMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~------~~~~vift~sGttaal~~l~~~l~ 161 (609)
+....+++|+.+.++.--+|. +..+.....+|+++|++++-+ + ++|++| +|...||..++.++.
T Consensus 78 ~ts~~a~~Av~~al~Sgk~N~--------Yaps~G~~~AR~AVAeYl~~~l~~kl~a-~DV~lt-sGC~qAIe~~i~~LA 147 (447)
T KOG0259|consen 78 RTSQEAEQAVVDALRSGKGNG--------YAPSVGILPARRAVAEYLNRDLPNKLTA-DDVVLT-SGCSQAIELAISSLA 147 (447)
T ss_pred cCCHHHHHHHHHHHhcCCCCC--------cCCccccHHHHHHHHHHhhcCCCCccCc-CceEEe-ccchHHHHHHHHHhc
Confidence 456778888888886422222 222333667899999996643 3 379999 899999999999885
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEE
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
+||. .|+++.+.|+-+..-++..|.+|+++.+-+ ++++|++.+|+.++ ++|..+++
T Consensus 148 ---------------~p~a--NILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-----ENT~Aivv 205 (447)
T KOG0259|consen 148 ---------------NPGA--NILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-----ENTVAIVV 205 (447)
T ss_pred ---------------CCCC--ceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-----cCeeEEEE
Confidence 7888 699999999988888888999999998743 78999999999998 68999999
Q ss_pred ecccCccccccC---HHHHHHHHHHhCCeEEEeccccC----CcccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEE
Q 038499 240 SACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLM 311 (609)
Q Consensus 240 s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~----~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~ 311 (609)
.+|+||.|.+.. +++|+++|+++|+++|.|+.+.- +.-.+.|..+...-.-+...+.+|-+--|+ .+||+++
T Consensus 206 iNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~ 285 (447)
T KOG0259|consen 206 INPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIAL 285 (447)
T ss_pred eCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEE
Confidence 999999999976 78999999999999999998541 122234444322112334457788776564 5999999
Q ss_pred echhhccCCCCCCccCCCceEeeccccccccccccccccc--ccCCChhHHHHHHHHHHHHHHH--hcCHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER--ESGGTPQVIQMIRAALAFWVKE--YIGHEVIKKQEETY 387 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r--~~~gtp~i~~~~~aal~~~~~~--~~g~~~i~~~~~~l 387 (609)
++.. ..++.. ...+.+... ...|.+.++ ++|+--.+.+ +.-.+....-.+..
T Consensus 286 hD~~---gvf~~~------------------~~~q~~~~~~~~~~~p~Tii---Q~AlP~IL~kTp~efF~k~~~~lk~n 341 (447)
T KOG0259|consen 286 HDPR---GVFRDT------------------KVVQGIKNFLDIIPGPATII---QGALPDILEKTPEEFFDKKLSFLKSN 341 (447)
T ss_pred eccc---ccccch------------------HHHHHHHHHHhccCCccHhH---HHHhHHHHHhChHHHHHHHHHHHHhh
Confidence 8765 111111 000000000 112222333 3333322221 22345556677778
Q ss_pred HHHHHHHhCCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 388 IERALERLLPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
++...++|+++|++. ...|. ...+.+.-..-.. -..+-+.-+++..|.++..+.+-+|.++.
T Consensus 342 a~l~y~~Lk~IP~l~cp~kPe----g~mylmv~l~~s~-----------~~~~~dD~dFc~kL~~Eesv~~LPG~af~-- 404 (447)
T KOG0259|consen 342 ADLCYSRLKDIPCLTCPVKPE----GCMYLMVKLNLSL-----------FPDIEDDVDFCQKLAREESVICLPGQAFG-- 404 (447)
T ss_pred HHHHHHHHhcCCCcccCcCCC----cceEEEeccchhh-----------hccccccHHHHHHHhhhcceEEecccccc--
Confidence 899999999999998 44442 2222222211000 00112345677777777899999887655
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++|+|+++. ...+.++..++.|+....+
T Consensus 405 ---------------------------~~nw~Ri~i~--~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 405 ---------------------------LKNWLRIVIT--VEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ---------------------------CCCeEEEEEc--cChHHHHHHHHHHHHHHHh
Confidence 3699999997 5778899999999988754
No 244
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.81 E-value=9.9e-18 Score=182.85 Aligned_cols=338 Identities=14% Similarity=0.056 Sum_probs=195.4
Q ss_pred HHHHHHhCC--CCCC--cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc--
Q 038499 128 NYIKKCLGG--GQED--AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-- 201 (609)
Q Consensus 128 ~~ia~~~g~--~~~~--~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-- 201 (609)
+++.+..+. .+.+ +|++| +|+++++..++.++.. ...+.||| .|++..+.|+.+....+..
T Consensus 140 ~y~~~~~~~~~~~~~~~~V~it-~Gat~al~~~~~~l~~----------~~ll~pGD--~Vlv~~P~y~~y~~~~~l~~~ 206 (521)
T TIGR03801 140 QYLIQEMCGNKPPPGEFDLFAV-EGGTAAMCYIFDSLKA----------NELLKKGD--KIALMTPIFTPYLEIPELPRY 206 (521)
T ss_pred HHHHhhccCCCCCCCcCeEEEe-CCHHHHHHHHHHHHhH----------hhcCCCCC--EEEEeCCCcHHHHHHHHHhcC
Confidence 455554432 3333 68888 8899899887765310 00147999 6999999998887776554
Q ss_pred CceEEEEecCC--C-----CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHh--CCeEEEe
Q 038499 202 LAEVVEIGLDD--D-----GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQY--GGFACFD 269 (609)
Q Consensus 202 G~~vv~v~~~~--~-----g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~--g~~vivD 269 (609)
|++++.|+.+. + +.+|+++|+++++ ++++++++++|+||||.+.+ +++|+++|++| ++++|+|
T Consensus 207 g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-----~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~D 281 (521)
T TIGR03801 207 DFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-----PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTD 281 (521)
T ss_pred CcEEEEeecccccccccccCCCCHHHHHHhcC-----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEEC
Confidence 78888888753 2 6789999998876 68999999999999999988 56678889987 9999999
Q ss_pred ccccCCc-ccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhh---ccCCCCCCccCCCceEeec-cccccccc
Q 038499 270 FAASGPY-VEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALY---QLGSFPPSTCGGGTVNYVN-GFNEKDTL 343 (609)
Q Consensus 270 ~A~~~~~-~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~---~l~~~~p~~~ggg~v~~~~-~~~~~~~~ 343 (609)
++++.-. ....+... .....+++.|++|.+|.|+ .+|+++++++.+ .+..+++.....-.-.|.. ...++.-.
T Consensus 282 EvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~ 360 (521)
T TIGR03801 282 DVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLK 360 (521)
T ss_pred CCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhh
Confidence 9976321 11111111 1123577889999997553 499999986511 0211110000000000000 00001111
Q ss_pred ccccc-------cccccCCChhHHHH--HH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc
Q 038499 344 YLEDI-------EERESGGTPQVIQM--IR-AALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA 413 (609)
Q Consensus 344 ~~~~~-------~~r~~~gtp~i~~~--~~-aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~ 413 (609)
+.+.+ ......|.+...+. .. ++.+++-......+.+++..++.++.+.+.| |+.+... .+..+
T Consensus 361 fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~--~~~g~ 434 (521)
T TIGR03801 361 FIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL----GLPLQED--PNDVA 434 (521)
T ss_pred hHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc----CCCCcCC--CCCeE
Confidence 11110 11122333333332 11 1222221111234555666666777777777 3322111 13445
Q ss_pred eEEEEeccCCCCCcCCCCCCCC-----CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhh
Q 038499 414 ILSFNIHSSTINSSLGENTKTE-----TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQK 488 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~-----~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~ 488 (609)
++.|.-.. ..... ..+. -....+..+++..|.++.||.+.+|..|..+
T Consensus 435 ~Y~~~di~-~~~~~----~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~---------------------- 487 (521)
T TIGR03801 435 YYTLIDLE-EWAEK----NYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP---------------------- 487 (521)
T ss_pred EEEEeehH-HHHHH----hcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC----------------------
Confidence 55555443 11000 0000 0001245678888888899999999877532
Q ss_pred CCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 489 GYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 489 ~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+++|||+.. .+++++..+.+.|+.++++
T Consensus 488 ------~~~vRisla~-l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 488 ------EWSVRVSLAN-LNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred ------CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence 3689999952 5788899999999988754
No 245
>PRK07049 methionine gamma-lyase; Validated
Probab=99.81 E-value=8.8e-18 Score=181.31 Aligned_cols=310 Identities=16% Similarity=0.101 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW--- 198 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--- 198 (609)
....+++.|+++.|.+ +++++++|+. ++..++..+ +++|| .|+++.+.|+.+...+
T Consensus 84 t~~~Le~~lA~leg~~---~~iv~~sG~~-Ai~~~l~al---------------~~~Gd--~Vv~~~p~Y~~~~~~~~~~ 142 (427)
T PRK07049 84 NSEIVEDRLAVYEGAE---SAALFSSGMS-AIATTLLAF---------------VRPGD--VILHSQPLYGGTETLLAKT 142 (427)
T ss_pred CHHHHHHHHHHHhCCC---cEEEEccHHH-HHHHHHHHH---------------hCCCC--EEEEcCCCcccHHHHHHHH
Confidence 3567899999999865 3455557776 577776655 47899 6889988888775543
Q ss_pred -HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH------hCCeEEEecc
Q 038499 199 -RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ------YGGFACFDFA 271 (609)
Q Consensus 199 -~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~------~g~~vivD~A 271 (609)
...|++++.++.. .|++++++++.+....++++++++++++||||.+.|+++|.+++++ +++++++|++
T Consensus 143 l~~~Gi~~v~~~~~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 143 FRNFGVGAVGFADG----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred HHhcCcEEEEEeCC----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 4578887777622 4778888777532222579999999999999999999999999988 8999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
...+.....+ . .+.|+++.|++|++||..| .|+++.++++ ++.+....
T Consensus 219 y~~~~~~~pl-~---~g~divv~S~SK~~gG~~glr~G~vv~~~~l--~~~l~~~~------------------------ 268 (427)
T PRK07049 219 LLGPVFQKPL-E---HGADLSVYSLTKYVGGHSDLVAGAVLGRKAL--IRQVRALR------------------------ 268 (427)
T ss_pred ccccccCCcc-c---cCCCEEEEcCceeecCCCCcEEEEEECCHHH--HHHHHHHH------------------------
Confidence 6654322222 1 2679999999999997543 7999888776 22221110
Q ss_pred ccccCCChhHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC----C-----------CCCc
Q 038499 350 ERESGGTPQVIQM-IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT----S-----------TKRQ 412 (609)
Q Consensus 350 ~r~~~gtp~i~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~----~-----------~~r~ 412 (609)
.....+.+...+. +..++ .......++..+.++.+.+.|+++|+++ |+-|. + ....
T Consensus 269 ~~~g~~ls~~~a~l~~r~L-------~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g 341 (427)
T PRK07049 269 SAIGTQLDPHSCWMLGRSL-------ETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAG 341 (427)
T ss_pred HhcCCCCCHHHHHHHHcCC-------ChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCc
Confidence 0000111122111 11111 1233444556778889999999988874 44331 1 1235
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
++++|.+.. +. -....+.+.| +.+.+.+.-|...+ .|.......+..+...
T Consensus 342 ~~~s~~~~~-~~---------------~~~~~f~~~l-~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~--------- 395 (427)
T PRK07049 342 STFSFDIKG-GQ---------------AAAFRFLNAL-QIFKLAVSLGGTESLASHPASMTHSGVPADVRE--------- 395 (427)
T ss_pred cEEEEEEcC-CH---------------HHHHHHHHcC-cccEEcccCCCCCceeeCCCccccccCCHHHHH---------
Confidence 688888765 21 1234555555 45666666564332 1211111122221111
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
..|+.++.||||++. |+++.+++-|+..++
T Consensus 396 ~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 396 RIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred hcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 246678999999996 455555555555443
No 246
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.8e-18 Score=166.42 Aligned_cols=291 Identities=17% Similarity=0.211 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---HH
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS---WR 199 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~---~~ 199 (609)
..++++.+|+++|-+.. +|+.|||.+++-.+...+. ++|. .|++++..|--.... ..
T Consensus 58 t~rLE~~vA~l~GKEAg---LFv~SGTmgNllaIm~Hc~---------------~rg~--eii~gd~~HI~~~E~gg~s~ 117 (384)
T KOG1368|consen 58 TNRLEQRVAELFGKEAG---LFVPSGTMGNLLAIMVHCH---------------QRGS--EIIVGDRAHIHRYEQGGISQ 117 (384)
T ss_pred HHHHHHHHHHHhCccce---eeecccccccHHHHHHHhc---------------CCCc--eEEeccchheeehhccChhh
Confidence 45688899999998754 7888999998777665543 5777 699999998755432 23
Q ss_pred HcCceEEEEecCCCCCCCHHHHHHHHhhhc---cCCCceEEEEecccCccc-cccCHH---HHHHHHHHhCCeEEEeccc
Q 038499 200 QSLAEVVEIGLDDDGLLDIEALRSKLELYK---DAKRPILGSFSACSNVTG-IYSDTR---SIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 200 ~~G~~vv~v~~~~~g~ld~e~L~~al~~~~---~~~~~~lv~~s~~sn~TG-~~~dl~---~I~~la~~~g~~vivD~A~ 272 (609)
..|+.++.+...++|.++++++++++..+. +.+.|++|++.+.+|.+| .+.|++ +|.++|++||+.++.|+|-
T Consensus 118 l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR 197 (384)
T KOG1368|consen 118 LAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR 197 (384)
T ss_pred hccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhh
Confidence 357888888888899999999999997432 445789999999999887 888876 5788999999999999982
Q ss_pred c---CCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC--CccCCCceEeeccccccccccccc
Q 038499 273 S---GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP--STCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 273 ~---~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p--~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
- +-...+.++.. ....|.+..+++|.+|.|-| .+++.+++++ ++.+- -..|||+
T Consensus 198 i~NAavasgV~vk~i-~~~fDSVsiCLSKglgAPVG-SViVG~k~FI--~kA~~~RKalGGGm----------------- 256 (384)
T KOG1368|consen 198 IFNAAVASGVPVKKI-CSAFDSVSICLSKGLGAPVG-SVIVGSKDFI--DKARHFRKALGGGM----------------- 256 (384)
T ss_pred hhhHHHHcCCCHHHH-HHhhhhhhhhhhccCCCCcc-cEEEccHHHH--HHHHHHHHHhcCch-----------------
Confidence 1 11222233322 12469999999999999987 8999999983 33211 1123332
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
..+--+.++++..+ + .... ..++.++.+..+.+.+...+++++-.+. -...++...+.. +.
T Consensus 257 ---------RQsGvLaaaaLval--~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a--~etNiv~~~l~q-~~--- 317 (384)
T KOG1368|consen 257 ---------RQSGVLAAAALVAL--D-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA--VETNIVNMVLCQ-AR--- 317 (384)
T ss_pred ---------hHHHHHHHHHHHHh--h-cchH-HHHHHHHHHHHHHHHhccccceeeecch--hhcceeeeeccc-cc---
Confidence 22222233443322 2 1233 4455666777777778777778876552 233444444443 22
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
++.+.+++.| ++.||.+-+|. ...+|+.+++-.|
T Consensus 318 ------------~~~~~l~~~~-~k~gi~lm~~~---------------------------------s~r~Rivlh~Qvt 351 (384)
T KOG1368|consen 318 ------------LTAEELCKFL-EKNGILLMGGA---------------------------------SRRIRIVLHHQVT 351 (384)
T ss_pred ------------CCHHHHHHHH-HHCCeEEeecc---------------------------------ccceEEEEEEecC
Confidence 7889999999 55799988553 1458999999999
Q ss_pred HHHHHHHHHHHH
Q 038499 508 NEEFEFTLEALE 519 (609)
Q Consensus 508 ~eeid~ll~al~ 519 (609)
++++++++.++.
T Consensus 352 ~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 352 DEDVEYVKSVLS 363 (384)
T ss_pred HHHHHHHHHHHH
Confidence 999999999995
No 247
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.81 E-value=2.4e-17 Score=177.23 Aligned_cols=337 Identities=17% Similarity=0.193 Sum_probs=201.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+.+.... .... . .......++.++++++.+.
T Consensus 29 ~~G~~l~d~~G~---~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~-~~~~--~----~~~~~~~~l~~~l~~~~~~- 97 (396)
T PRK04073 29 AEGVWVKDPEGN---RYMDMLSAYSAVNQGHRHPKIIQALKDQADKVT-LTSR--A----FHSDQLGPWYEKVAKLTGK- 97 (396)
T ss_pred eeecEEEECCCC---EEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcc-cccc--c----cCCHHHHHHHHHHHhcCCC-
Confidence 444555555564 48997543 4567899999988876531 1110 0 1234456778888888764
Q ss_pred CCCcEEEeCChHHHHHHHHHHHh-cccchhhHHHHHHhhhcCCCceEEEECCCCcc-chHHHHHHcCc------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVM-GIAVPSILREKLIKCLRDEERWVVFVGPHEHH-SNLLSWRQSLA------------ 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l-~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~-s~~~~~~~~G~------------ 203 (609)
+.++|+.||+.+.. .++.+. .... . ....++|.. .|++....|| .....+...+.
T Consensus 98 --~~~~~~~SGseA~e-~Alk~a~~~~~------~-~~g~~~~r~-~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~ 166 (396)
T PRK04073 98 --DMVLPMNTGAEAVE-TAIKAARRWAY------D-VKGVEPNKA-EIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLP 166 (396)
T ss_pred --CeEEEcCChHHHHH-HHHHHHHHHhh------h-ccCCCCCCC-EEEEECCCcCCCCHHHHhhcCCcccccCCCCCCC
Confidence 27888888888633 333322 1000 0 000113433 4555554444 44444433221
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE 278 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~ 278 (609)
.+..++.+ |+++|++++. +++++++++.++|+||.+.| +++|.++|++||+++|+|+++.. +...
T Consensus 167 ~~~~~~~~-----d~~~l~~~i~-----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g 236 (396)
T PRK04073 167 GIKKIPYG-----DLEALKAAIT-----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG 236 (396)
T ss_pred CceEeCCC-----CHHHHHHhcc-----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc
Confidence 12333332 7899999887 57899999999999999987 78999999999999999999873 2211
Q ss_pred ----ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 279 ----IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 279 ----id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.+... ..+|++++ +|.+|++ ..+|++++++++ ++.+.+...+ . ..
T Consensus 237 ~~~~~~~~~---~~pdi~~~--sK~lg~gg~~ig~~~~~~~i--~~~~~~~~~~-~----------------------t~ 286 (396)
T PRK04073 237 KLFACDWDN---VTPDMYIL--GKALGGGVFPISCVAANRDI--LGVFTPGSHG-S----------------------TF 286 (396)
T ss_pred HHHHhhhcC---CCCCEEEe--cccccCCCCcceEEEEcHHH--HhhhcCCCCC-C----------------------CC
Confidence 12111 14587776 5999876 458999999988 3443221000 0 01
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
.+.|.......+++... +. +.+.++.+++.+++.+.|+++. ...+... ..+..++.+.+..
T Consensus 287 ~~~~~~~aaa~aaL~~~--~~---~~l~~~~~~~~~~l~~~L~~l~-~~~i~~~-~~~g~~~~~~~~~------------ 347 (396)
T PRK04073 287 GGNPLACAVSIAALEVL--EE---EKLPERSLELGEYFKEQLKEID-NPMIKEV-RGRGLFIGVELNE------------ 347 (396)
T ss_pred CCCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHhhc-CCcccce-ecceEEEEEEecc------------
Confidence 22232222233444332 11 2355677778888888887752 1111111 1122333333222
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
....+.+.|.+ .||.+.+. .++++|+++++.+|++|+++
T Consensus 348 -------~~~~~~~~l~~-~Gv~~~~~---------------------------------~~~~iRi~p~l~~t~e~i~~ 386 (396)
T PRK04073 348 -------PARPYCEALKE-EGLLCKET---------------------------------HETVIRFAPPLVITKEELDW 386 (396)
T ss_pred -------hHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEECCcccCHHHHHH
Confidence 35678888866 59987621 13789999999999999999
Q ss_pred HHHHHHHHH
Q 038499 514 TLEALEFIA 522 (609)
Q Consensus 514 ll~al~~v~ 522 (609)
++++|++++
T Consensus 387 ~~~~l~~~l 395 (396)
T PRK04073 387 AFEKIKAVL 395 (396)
T ss_pred HHHHHHHHh
Confidence 999998764
No 248
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.1e-17 Score=182.71 Aligned_cols=322 Identities=14% Similarity=0.066 Sum_probs=190.0
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC--ceEEEEecCC--CCC
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL--AEVVEIGLDD--DGL 215 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G--~~vv~v~~~~--~g~ 215 (609)
++|++| +|+++++..++.++.. ...++||| .|+++.+.|+.+....+..| ++++.++.++ ++.
T Consensus 162 ~~I~vT-~Ga~~al~~~~~aL~~----------~~ll~pGD--~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~ 228 (527)
T PRK09275 162 FDLFAV-EGGTAAMCYIFDSLKE----------NGLLKAGD--KIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQ 228 (527)
T ss_pred CeEEEe-CCHHHHHHHHHHHHhh----------hhcCCCCC--EEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCC
Confidence 378888 8999999888775310 00158999 69999999999887777664 5566666543 468
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHH--hCCeEEEeccccCCc-ccccCCCCCCCCc
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQ--YGGFACFDFAASGPY-VEIDVRSGQTDGY 289 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~--~g~~vivD~A~~~~~-~~id~~~~~~~~~ 289 (609)
+|+++|+++++ +++|++++++|+||||.+.+ +++|+++|++ +++++|+|+++..-. ....+... ....
T Consensus 229 ~d~~~l~~~~~-----~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~ 302 (527)
T PRK09275 229 YPDSELEKLRD-----PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYN 302 (527)
T ss_pred CCHHHHHhhcC-----CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCC
Confidence 99999999887 68999999999999999988 5678888854 599999999975321 11111111 1133
Q ss_pred cEEEEcCCCCCCCCC-CcEEEEEech-----hhccCCCCCC-------ccCCCceEeeccccccccccccc-------cc
Q 038499 290 DAIFLSTHKFLGGPG-SPGILLMTKA-----LYQLGSFPPS-------TCGGGTVNYVNGFNEKDTLYLED-------IE 349 (609)
Q Consensus 290 D~v~~S~hK~lggp~-g~G~L~~~~~-----~~~l~~~~p~-------~~ggg~v~~~~~~~~~~~~~~~~-------~~ 349 (609)
.+++.|++|.+|-|+ .+|+++++++ + ++.++.. .++.-+ ..+..-.+.+. ..
T Consensus 303 ~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~--i~~l~~~~~~~~~~ry~~~~------~~p~~~~fidrlvad~~~v~ 374 (527)
T PRK09275 303 TILVYSFSKYFGATGWRLGVIALHEDNVFDKL--IAKLPEEKKKELDKRYSSLT------TDPEKLKFIDRLVADSRQVA 374 (527)
T ss_pred EEEEeehhhhccCcHhHHhhhhcCchhHHHHH--HHhccHHHHHHHHhhhhhcc------CCcchhhhHHHHHHHHHHHH
Confidence 577889999997443 4899999886 3 2222100 000000 00000001110 01
Q ss_pred ccccCCChhHHHHHHH---HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCC
Q 038499 350 ERESGGTPQVIQMIRA---ALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~a---al~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
.....|.+...+...+ ..+++-......+.+++..++.++.+.+.|. +.+.. ..+..+++.|.-.. ....
T Consensus 375 ~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg----~~~~~--~~p~g~fY~~~di~-~~~~ 447 (527)
T PRK09275 375 LNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG----LPEPE--DPNNAAYYTLIDLE-EWAE 447 (527)
T ss_pred HhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC----CCCcC--CCCCeeEEEEEEhH-Hhhh
Confidence 1122344444443211 1121111112345566666777777777772 22211 11345566555333 1100
Q ss_pred cC-CCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 427 SL-GENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 427 ~~-~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.. ...-..--....+..+++..|.++.||.+.+|..|..+ ++++|||+..
T Consensus 448 ~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~----------------------------~~~vRis~a~- 498 (527)
T PRK09275 448 KNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGP----------------------------EWSVRVSLAN- 498 (527)
T ss_pred hccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCC----------------------------CCeEEEEEec-
Confidence 00 00000000001246778888888899999999877521 4789999952
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 038499 506 MSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 506 ~t~eeid~ll~al~~v~~~ 524 (609)
.+++++..+.+.|+.++.+
T Consensus 499 ~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 499 LNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 4788999999999988765
No 249
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=7.8e-18 Score=178.61 Aligned_cols=309 Identities=13% Similarity=0.047 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS- 197 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~- 197 (609)
.+...+.+++.++.+-+.. +.++++ ||+ +|+..++..+ +++|| +|+++...|+++...
T Consensus 62 gnPt~~~Le~~la~le~~~--~~v~~s-SG~-aAi~~~l~al---------------l~~GD--~Vlv~~~~Y~~~~~l~ 120 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSA--GTILVP-SGL-AAVTVPFLGF---------------LSPGD--HALIVDSVYYPTRHFC 120 (395)
T ss_pred CChHHHHHHHHHHHHhCCC--CEEEEC-cHH-HHHHHHHHHh---------------cCCCC--EEEEccCCcHHHHHHH
Confidence 3455677888898887754 256665 665 5777776655 58999 799999999887643
Q ss_pred ---HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 198 ---WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 198 ---~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
.+..|+++..++.+ +.++++++++ ++|++|++++++||++.+.|+++|+++||++|+++++|++++.
T Consensus 121 ~~~l~~~Gi~v~~vd~~-----~~e~l~~al~-----~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~ 190 (395)
T PRK05967 121 DTMLKRLGVEVEYYDPE-----IGAGIAKLMR-----PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWAT 190 (395)
T ss_pred HHHHHhcCeEEEEeCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccC
Confidence 35679999988643 4578999998 6899999999999999999999999999999999999999887
Q ss_pred CcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 275 PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 275 ~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
|... +++. .|+|+++.|.+|+++|-.. .|+++.+++.. +.+.. .+.
T Consensus 191 p~~~---~pl~-~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~--~~l~~--------------------------~~~ 238 (395)
T PRK05967 191 PLYF---RPLD-FGVDISIHAATKYPSGHSDILLGTVSANEKCW--PQLLE--------------------------AHG 238 (395)
T ss_pred ceec---ChhH-cCCCEEEEecccccCCCCCeeEEEEEcCHHHH--HHHHH--------------------------HHH
Confidence 6322 2211 2899999999999987543 57666665541 11110 000
Q ss_pred cCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCC--C-----------CCCcceEEE
Q 038499 353 SGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNT--S-----------TKRQAILSF 417 (609)
Q Consensus 353 ~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~--~-----------~~r~~~~~f 417 (609)
..|. .+... +-+ .+....-+....++..+.+..+.+.|+++|.+ +|+-|. + ....++++|
T Consensus 239 ~~G~~~~p~d---a~l--~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf 313 (395)
T PRK05967 239 TLGLCAGPDD---TYQ--ILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSF 313 (395)
T ss_pred HcCCCCCHHH---HHH--HHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEE
Confidence 1122 11111 111 11111223444566677788888899988887 455442 1 123578888
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
.+.. +..+ + .-....+.+.| +.+.+.+.-|...+- ..| ..+... .+. + .++.++.
T Consensus 314 ~l~~-~~~~----------~-~~~~~~f~~~l-~l~~~~~slG~~~sL-i~~--~~~~~~----~~~---~--~~~~~~l 368 (395)
T PRK05967 314 VLAA-GPEK----------G-KAKAHAFLDAL-EIFGLGYSWGGYESL-ALH--VKLGDR----TVA---K--APYAGPV 368 (395)
T ss_pred EEcC-CCcc----------c-HHHHHHHHHhC-CcceEccCCCCccee-eee--CCCChh----Hhh---h--ccCCCCe
Confidence 8864 1000 0 01233455555 445555555543220 011 111110 011 1 1344589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~ 520 (609)
||||++.-..++=++.+.++|+.
T Consensus 369 iRlSvGlEd~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 369 IRLQIGLEDVPDLKADLERGFAA 391 (395)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999976555555555555543
No 250
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.80 E-value=3.3e-18 Score=173.19 Aligned_cols=345 Identities=15% Similarity=0.153 Sum_probs=228.7
Q ss_pred chHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHH
Q 038499 49 SSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASN 128 (609)
Q Consensus 49 ~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~ 128 (609)
++.+..++..|+-+.-. +.+ | ..-|+|.-.+|.-+-......... -.|++.-+|.......-+..++-.
T Consensus 80 esl~qil~~cr~tl~y~---vKT--g--HprffNQl~~glD~~~Lag~wlT~----t~Ntn~~TYEiAPvF~lmE~~vl~ 148 (510)
T KOG0629|consen 80 ESLAQILEDCRDTLKYS---VKT--G--HPRFFNQLSSGLDPIGLAGEWLTS----TANTNMFTYEIAPVFVLMEEEVLA 148 (510)
T ss_pred hhHHHHHHHHHHHHHhh---hcc--C--CCcchhhhccCCCHHHHHHHHHHh----ccCCCCceEEecceEEeehHHHHH
Confidence 55778888888776421 111 2 234777777777665443333322 257777666666667777888889
Q ss_pred HHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC---ceE
Q 038499 129 YIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL---AEV 205 (609)
Q Consensus 129 ~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G---~~v 205 (609)
.+.+..|-+.+..-||+++|+.+++..+..+.--..|.....+. ..++ .-+++++...|+|...+.+.+| -.+
T Consensus 149 km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm-~~~p---~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 149 KMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGM-FALP---PLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhh-hcCC---cEEEEecccchhhHHHHHHHhccCCcee
Confidence 99999998875356888899999888776654323332111111 1122 2268889999999999988887 588
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCC--
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVR-- 282 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~-- 282 (609)
+.|+.++.|.+++++||++|...+.. ..|-++..++.+++.|.+.|++.|+++|++|+.|+|||+|.++|..-....
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 99999999999999999999754322 236899999999999999999999999999999999999988764321111
Q ss_pred CC-CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc---cccccccccCCCh-
Q 038499 283 SG-QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY---LEDIEERESGGTP- 357 (609)
Q Consensus 283 ~~-~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~---~~~~~~r~~~gtp- 357 (609)
.+ ....+|.++.++||++|.|.-++.++.+.+-. +.+. ......|+. ..+..| ++......+.|..
T Consensus 305 kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gl-l~~C-----n~~~A~YLF---q~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGL-LQRC-----NQMSAIYLF---QQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred hccCccccCceeecHHHhhcCcchhhHHHHHHHHH-HHhh-----cccchhhhh---ccCceeecccccccchhhcCccc
Confidence 11 12457999999999999999899988887652 2222 111111110 011111 1111222333421
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEecc
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
++.-. =+.+.-+...|.+...++..++++|+.+++++-++.+.+-.. .+...+++|...+
T Consensus 376 D~FKl---WlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~-~pe~~nv~fw~vp 435 (510)
T KOG0629|consen 376 DVFKL---WLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFEL-EPEHVNVCFWYVP 435 (510)
T ss_pred cHHHH---HHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcC-CCceEEEeeccCc
Confidence 22211 111222355788999999999999999999998887766542 2445667776665
No 251
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.5e-17 Score=166.81 Aligned_cols=342 Identities=18% Similarity=0.154 Sum_probs=230.6
Q ss_pred CChHHHHHHHHHhhcCCccC--CCCCCchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 88 RSLRYIENYIINNVLPFYGN--THTCDSYVGQHTT-NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
-..+.|++++...+...|+. |+.. |+.|.... .....+.+..+++||++-. +|=-. ||+.+++..+..+
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkR-yYgGce~VD~vE~laierak~LFga~~a-nVQPh-SGs~AN~av~~Al----- 108 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKR-YYGGCEYVDEVEELAIERAKKLFGAEYA-NVQPH-SGSQANQAVYLAL----- 108 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCcc-ccCCCeeHHHHHHHHHHHHHHHhCCCcc-ccCCC-CchHHHHHHHHHH-----
Confidence 45677888888888777754 4443 44555554 4445578889999999866 55555 8999877766554
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HHcC--ceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQSL--AEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGS 238 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~G--~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~ 238 (609)
++||| .|+-.+..|.+.+.-. ...| .+++..+++. ++.+|.|++++.+.+ .+||+++
T Consensus 109 -----------l~pGD--timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e----~kPK~ii 171 (413)
T COG0112 109 -----------LQPGD--TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE----VKPKLII 171 (413)
T ss_pred -----------cCCCC--eEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH----hCCCEEE
Confidence 48999 5888888877665322 2233 4677778885 699999999999987 5899876
Q ss_pred EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec-hhhc
Q 038499 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK-ALYQ 317 (609)
Q Consensus 239 ~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~-~~~~ 317 (609)
.-. +..-...|.+++.++|++.|+++++|.||-+|.+.-...+-....+|++++|.||.|.||.| |+++.++ ++.
T Consensus 172 ~G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~- 247 (413)
T COG0112 172 AGG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRG-GIILTNDEELA- 247 (413)
T ss_pred ECc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCc-eEEEeccHHHH-
Confidence 643 34446789999999999999999999998766544333332234689999999999999997 8888886 552
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+++....+-|. .|.|..--+.+.+.+|....+-+.+...++..++++.+.+.|.+
T Consensus 248 -kkin~aVFPg~------------------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~ 302 (413)
T COG0112 248 -KKINSAVFPGL------------------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE 302 (413)
T ss_pred -HHhhhhcCCcc------------------------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 23332221111 13344333334444444333456678888888999999999988
Q ss_pred CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChh
Q 038499 398 NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 398 ~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~ 477 (609)
. |+++++.....++ +...+.+ . .+.+......| ++.||.+.--.-...|.+.
T Consensus 303 ~-G~~vvsGgTdnHl--~lVDl~~-~---------------~~~Gk~ae~~L-~~~~It~NKN~iP~D~~~p-------- 354 (413)
T COG0112 303 R-GFKVVSGGTDNHL--VLVDLRS-K---------------GLTGKKAEAAL-ERAGITVNKNAIPFDPESP-------- 354 (413)
T ss_pred c-CCeEecCCccceE--EEEEccc-C---------------CCCHHHHHHHH-HHcCEeeccCCCCCCCCCC--------
Confidence 5 9999875322232 2222322 1 25677777777 6689988743221111110
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHHHHHHHhcc
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFP----YYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~----~~~t~eeid~ll~al~~v~~~~~ 526 (609)
..+..|||... .-+.++|++.+.+.|..++....
T Consensus 355 ---------------~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 355 ---------------FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ---------------CCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 12567888754 33468899999999998887654
No 252
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.80 E-value=2.6e-17 Score=176.62 Aligned_cols=341 Identities=15% Similarity=0.110 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
..++++.+++++|.+ .+++| +|.++|+..++.++ ++||| +| ++.+.+.++.......|
T Consensus 55 ~~~Leeaia~~~g~~---~vv~t-~~Gt~Al~la~~al---------------~~pGD--~V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 55 FYDLEDAVQDLFGFK---HIIPT-HQGRGAENILFSIL---------------LKPGR--TV-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred HHHHHHHHHHHHCCC---eEEEc-CCHHHHHHHHHHHh---------------CCCCC--EE-ccCCcccchHHHHHhCC
Confidence 567899999999985 67888 55566787777766 47999 55 56666667777788899
Q ss_pred ceEEEEecCC----------CCCCCHHHHHHHHhhhccCCCceEEEEecccCcc-ccccCH---HHHHHHHHHhCCeEEE
Q 038499 203 AEVVEIGLDD----------DGLLDIEALRSKLELYKDAKRPILGSFSACSNVT-GIYSDT---RSIARLLHQYGGFACF 268 (609)
Q Consensus 203 ~~vv~v~~~~----------~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~dl---~~I~~la~~~g~~viv 268 (609)
++++.+++++ .|.+|+++|+++|++. ...++++|+++.++|++ |...+. ++|.++|++||+++|.
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~-~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~ 191 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV-GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVL 191 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCcc-cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999863 3569999999999841 11348899999999998 898764 5789999999999999
Q ss_pred eccccCC-----------cccccCCCCC---CCCccEEEEcCCCCCCCCCCcEEEEEech-hhccCCCCCCccCCCceEe
Q 038499 269 DFAASGP-----------YVEIDVRSGQ---TDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 269 D~A~~~~-----------~~~id~~~~~---~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~l~~~~p~~~ggg~v~~ 333 (609)
|+|+... +....+.+.. ....|.+++|++|-+++|.| |+++.+++ ++ .+++..... +
T Consensus 192 DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~--~~~~~~~~~-----~ 263 (431)
T cd00617 192 DAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELY--EEARQRVVL-----Y 263 (431)
T ss_pred EchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHH--HHHHHhccc-----c
Confidence 9997642 2221111100 12469999999999887775 89999874 63 222110000 0
Q ss_pred ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA 413 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~ 413 (609)
+.....|..+.... ++++..+.+..-.+.+.++. +.++++.+.|.+. |+.+..|. .+
T Consensus 264 ---------------~~~~~~gG~~~r~~--~A~A~gL~e~~~~~~l~~~~-~~r~~l~~~L~~~-G~~v~~P~----Gg 320 (431)
T cd00617 264 ---------------EGFVTYGGMAGRDM--EALAQGLREAVEEDYLRHRV-EQVRYLGDRLDEA-GVPIVEPA----GG 320 (431)
T ss_pred ---------------CCccccccccHHHH--HHHHHHHHhcccHHHHHHHH-HHHHHHHHHHHHC-CCCccCCC----cc
Confidence 00111122222222 12222221211133444443 3558888999887 78777653 34
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+..|.-.. ... +........+..++..|.++.||.+.. |.... +.++...+. ..
T Consensus 321 h~v~~d~~-~~~-------~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~--------~~~~~~~~~---------~~ 375 (431)
T cd00617 321 HAVFIDAR-EFL-------PHIPQEQFPAQALAAELYLEAGVRAVELGIFSA--------GRDPNTGEN---------KY 375 (431)
T ss_pred eEEEEEhH-Hhc-------CCCCcccCcHHHHHHHHHHHcCeeEEeecceec--------ccCCCCCcc---------cC
Confidence 55444332 100 000000125778887777888998642 33211 111110000 00
Q ss_pred CCCcEEEEecCC-CCCHHHHHHHHHHHHHHHHhcccccCCCcccccCCceee
Q 038499 493 VKPGWTRISFPY-YMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKTGTWCF 543 (609)
Q Consensus 493 ~~~g~iRls~~~-~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~~~~w~~ 543 (609)
-....+||.++- --|.++++++.++|..+.++... ++-|.|-+..-.-||
T Consensus 376 ~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lr~ 426 (431)
T cd00617 376 PELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED-IRGLRIVYEPKLLRH 426 (431)
T ss_pred CccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh-CCCeEEEecCcccee
Confidence 013789999963 45899999999999999988443 445665544433333
No 253
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.80 E-value=1.8e-17 Score=179.39 Aligned_cols=313 Identities=14% Similarity=0.044 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEE-CCCCccchHH
Q 038499 120 TNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFV-GPHEHHSNLL 196 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~ 196 (609)
..+++.+.+++.+..| ++++ +|++| +|+++++..++.++.-... -.+|| .|++ ..++|+.+..
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~-~I~it-~Ga~~al~~~~~~l~~~~~----------~~~gd--~v~i~~~P~y~~y~~ 142 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQ-NIALT-NGSQSAFFYLFNLFAGRRA----------DGSLK--KILFPLAPEYIGYAD 142 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChh-hEEEc-cChHHHHHHHHHHHhcccc----------CCCCC--eEEEecCCCchhhHH
Confidence 3444444444444445 4555 88888 8999999999887630000 02466 5888 6888888766
Q ss_pred HHHHcC----ceEEEEecCC---CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeE
Q 038499 197 SWRQSL----AEVVEIGLDD---DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFA 266 (609)
Q Consensus 197 ~~~~~G----~~vv~v~~~~---~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~v 266 (609)
..+..+ ..+..++++. +..+|+++|+ +. ++++++++++++||||.+++ +++|+++|++|++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~i 215 (416)
T PRK09440 143 AGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPL 215 (416)
T ss_pred HhhccCceeecccccccccccccccCCCHHHcc--cC-----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcE
Confidence 544322 2222233333 2468999987 33 57899999999999999988 556888999999999
Q ss_pred EEeccccCCcccc---cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 267 CFDFAASGPYVEI---DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 267 ivD~A~~~~~~~i---d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
|+|++++.....+ +..+. ..+.-+++.|++|+ +.| ..+|++++++++ ++.+...
T Consensus 216 I~De~Y~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l--~~~~~~~------------------ 273 (416)
T PRK09440 216 LIDNAYGPPFPGIIFSEATPL-WNPNIILCMSLSKL-GLPGVRCGIVIADEEI--IEALSNM------------------ 273 (416)
T ss_pred EEeCCccccCCCcchhhcCcc-ccCCeEEEeccccc-CCCcceEEEEeCCHHH--HHHHHHH------------------
Confidence 9999986422111 11110 01234777899997 545 359999998887 3332110
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHhCCC-C--ceEEeCCCCCCCcceE
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGH----EVIKKQEETYIERALERLLPN-Q--NIKILGNTSTKRQAIL 415 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~----~~i~~~~~~l~~~~~~~L~~~-p--~i~v~~~~~~~r~~~~ 415 (609)
......+++.+.+.+. ..++ .+.... +.++...++.++.+.+.|.+. + ++.+..+ ..+++
T Consensus 274 ------~~~~~~~~s~~~q~~~--~~~l-~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p----~gg~f 340 (416)
T PRK09440 274 ------NGIISLAPGRLGPAIA--AEMI-ESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP----EGAIF 340 (416)
T ss_pred ------HHHhccCCCcHHHHHH--HHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC----CCceE
Confidence 0001122333333222 1221 111111 112333334444455555432 2 3555444 33555
Q ss_pred EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 416 SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 416 ~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
.|...+ .. ..+..++.+.|.+ .||.+++|..|......... ...
T Consensus 341 iw~~~~-~~--------------~~~~~~~~~~l~~-~gV~v~pg~~F~~~~~~~~~--------------------~~~ 384 (416)
T PRK09440 341 LWLWFK-DL--------------PITTEELYQRLKA-RGVLVVPGHYFFPGLDEDWP--------------------HAH 384 (416)
T ss_pred EEEECC-CC--------------CCCHHHHHHHHHH-CCEEEechHhhCCCCccccC--------------------CcC
Confidence 555444 10 0346778888855 69999998766411000000 013
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+++||+++ .++++++.++++|+++++..+
T Consensus 385 ~~iRis~~--~~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 385 QCIRMNYV--QDDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred ceEEEEec--CCHHHHHHHHHHHHHHHHHHh
Confidence 69999997 378999999999999886543
No 254
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.80 E-value=1.8e-16 Score=170.77 Aligned_cols=344 Identities=16% Similarity=0.145 Sum_probs=203.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++....|+ .|+|..++ |-.++.|.+++.+.+... . +..... ......++++.++++.+.
T Consensus 20 ~~G~~~~d~dg~---~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~-~--~~~~~~----~~~~~~~~~~~l~~~~~~- 88 (400)
T PTZ00125 20 GKGVFVWDVEGK---KYYDFLSAYSAVNQGHCHPKILAALINQAQKL-T--LTSRAF----YNDVLGLAEKYITDLFGY- 88 (400)
T ss_pred eecCEEEeCCCC---EEEEcccCHhhccCCcCCHHHHHHHHHHHHhc-c--cccccc----cCHHHHHHHHHHHhCCCC-
Confidence 334556566664 38887643 335788999998887532 1 111010 134678889999988875
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcCce------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSLAE------------ 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G~~------------ 204 (609)
+.++|++||+.+....+-.+...... + +.+..+.. .|++....+|+ ....+...+..
T Consensus 89 --~~~~~~~SGs~A~e~al~~~~~~~~~---~----~~~~~~~~-~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~ 158 (400)
T PTZ00125 89 --DKVLPMNSGAEAGETALKFARKWGYE---V----KGIPENQA-KIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPG 158 (400)
T ss_pred --CEEEEeCCcHHHHHHHHHHHHHHHHh---c----cCCCCCCC-eEEEECCCcCCccHHHHhhcCCcchhccCCCCCCC
Confidence 27888889988644443322110000 0 00111222 35555544444 44444332211
Q ss_pred EEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCccc-
Q 038499 205 VVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVE- 278 (609)
Q Consensus 205 vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~- 278 (609)
++.++ ..|+++|+++++. +++++|+++.++|+||.+.| +++|.++|++||+++|+|++++ .+...
T Consensus 159 ~~~~~-----~~d~~~le~~l~~----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~ 229 (400)
T PTZ00125 159 FELVD-----YNDVEALEKLLQD----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK 229 (400)
T ss_pred ceEeC-----CCCHHHHHHHhCC----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch
Confidence 11222 2389999999962 57899999999999999988 9999999999999999999975 33211
Q ss_pred ---ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 279 ---IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 279 ---id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
.+... ...|++++| |+++++. ++|++++++++ ++.+.....+ . ...
T Consensus 230 ~~~~~~~~---~~pd~~~~s--K~l~~g~~~ig~v~~~~~~--~~~~~~~~~~-~----------------------t~~ 279 (400)
T PTZ00125 230 LLAHDHEG---VKPDIVLLG--KALSGGLYPISAVLANDDV--MLVIKPGEHG-S----------------------TYG 279 (400)
T ss_pred hhHHHhcC---CCCCEEEEc--ccccCCCcCcEEEEEcHHH--HhhccCCCCC-C----------------------CCC
Confidence 11111 145888765 9998764 68999999988 3443221100 0 012
Q ss_pred CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 355 GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
++|.......+++.+.. ..+ +.++.+++.+++++.|.++ +.+.... ....++++.+.. +.
T Consensus 280 ~~~~~~~aa~~~l~~i~--~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~----~~g~~~~v~~~~-~~------ 343 (400)
T PTZ00125 280 GNPLACAVAVEALEVLK--EEK---LAENAQRLGEVFRDGLKELLKKSPWVKEIR----GKGLLNAIVFDH-SD------ 343 (400)
T ss_pred cCHHHHHHHHHHHHHHH--hcC---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEe----cccEEEEEEEcc-Cc------
Confidence 34433333344455432 222 3344555566666665443 3222111 123344443332 10
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
......+++.|.+ .||.+.++ .++++||++++.++++|
T Consensus 344 --------~~~~~~~~~~l~~-~Gv~v~~~---------------------------------~~~~lRi~~~~~~~~~~ 381 (400)
T PTZ00125 344 --------GVNAWDLCLKLKE-NGLLAKPT---------------------------------HDNIIRFAPPLVITKEQ 381 (400)
T ss_pred --------chHHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEECCccCCHHH
Confidence 0245678888865 59988742 13789999998999999
Q ss_pred HHHHHHHHHHHHHhc
Q 038499 511 FEFTLEALEFIAIYG 525 (609)
Q Consensus 511 id~ll~al~~v~~~~ 525 (609)
++.++++|..++...
T Consensus 382 i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 382 LDQALEIIKKVLKSF 396 (400)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987654
No 255
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=8.3e-18 Score=178.29 Aligned_cols=302 Identities=16% Similarity=0.137 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH---
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--- 195 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--- 195 (609)
.....+++++.++++.|++. .++| +||+ +||+.++..+ +++|| +|+++...|....
T Consensus 62 ~~P~~~~lE~~la~leg~~~--av~~-sSG~-aAi~~al~al---------------l~~GD--~Vl~~~~~yg~t~~~~ 120 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEH--ALSF-SSGM-GAITSAILSL---------------IKKGK--RILSISDLYGQTFYFF 120 (384)
T ss_pred CChhHHHHHHHHHHHhCCCc--EEEe-CCHH-HHHHHHHHHH---------------hCCCC--EEEEecCccchHHHHH
Confidence 34557788999999999862 4555 4787 5788776655 47899 6888765444333
Q ss_pred -HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 196 -LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 196 -~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
......|++++.++.++...++ ++. +++++|++.+++|||+.+.|+++|+++||++| +++|.+++.
T Consensus 121 ~~~~~~~Gi~v~fvd~~~~~~~~-------l~~----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s 187 (384)
T PRK06434 121 NKVLKTLGIHVDYIDTDRLNSLD-------FDP----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS 187 (384)
T ss_pred HHHHHhcCcEEEEECCCChhhee-------ecC----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC
Confidence 3345579999999876422222 331 36899999999999999999999999999998 567999877
Q ss_pred CcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 275 PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 275 ~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
++..-.+. .++|++++|.||+++|+.. .|+++.+++.. .+.+... +.
T Consensus 188 ~~~~~pl~----~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~-~~~~~~~--------------------------~~ 236 (384)
T PRK06434 188 PYNQNPLD----LGADVVIHSATKYISGHSDVVMGVAGTNNKSI-FNNLVER--------------------------RK 236 (384)
T ss_pred cccCCchh----cCCCEEEeecccccCCCCCceEEEEecCcHHH-HHHHHHH--------------------------HH
Confidence 65532232 2789999999999998875 57776654331 1111100 00
Q ss_pred cCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------CCCcceEEEEeccCC
Q 038499 353 SGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------TKRQAILSFNIHSST 423 (609)
Q Consensus 353 ~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------~~r~~~~~f~~~~~~ 423 (609)
..|. .+- ..+++. +.+..-++.+.++..+++..+.+.|+.+|.++ |+-|.- ....++++|.+.. .
T Consensus 237 ~~G~~~~~---~~A~l~--~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-~ 310 (384)
T PRK06434 237 TLGSNPDP---IQAYLA--LRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-M 310 (384)
T ss_pred hcCCCCCH---HHHHHH--HhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-H
Confidence 0111 111 122221 12334567777888899999999999998874 554421 1245688888753 1
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
.....+.+.| +.+.+.+.-|...+ .|+......+.++... ..|+.++.|||
T Consensus 311 ----------------~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~---------~~gi~~~liRl 364 (384)
T PRK06434 311 ----------------EDVHKFIRNL-EIPMVAASLGGVESLITLPVETSHSSLSPEERE---------RLGISDNLVRF 364 (384)
T ss_pred ----------------HHHHHHHHhC-CcceEccCCCCCCeeeECCCccccccCCHHHHH---------hcCCCcCeEEE
Confidence 1234455555 44555555554221 1322222223322211 25667899999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q 038499 501 SFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v 521 (609)
|++.- +++.+++-|++.
T Consensus 365 svGlE----d~~dLi~dl~~A 381 (384)
T PRK06434 365 SIGIE----DIDDLIKDIENA 381 (384)
T ss_pred EeCcC----CHHHHHHHHHHH
Confidence 99964 455555555444
No 256
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=1.1e-16 Score=171.70 Aligned_cols=341 Identities=16% Similarity=0.144 Sum_probs=197.9
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..+ .|-..+.|.+++.+++......... .......++.++++++.+.
T Consensus 20 ~~G~~~~d~dG~---~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~la~~l~~~~~~- 88 (389)
T PRK01278 20 GEGVWLIDEDGE---RYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL-------YRIPEQERLAERLVENSFA- 88 (389)
T ss_pred eecCEEEECCCC---EEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc-------cCChHHHHHHHHHHhhCCC-
Confidence 445555555554 4888765 3567789999999988653211110 1234456777888887753
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC--ceEEEECCCCccchHHHHHHcCceEEEE----ecC
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE--RWVVFVGPHEHHSNLLSWRQSLAEVVEI----GLD 211 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v----~~~ 211 (609)
++++|+.+|+.+ +..++++.... ...+|+ +..|++....||+....+...+...... +..
T Consensus 89 --~~v~~~~sGseA-~~~al~~ar~~-----------~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 154 (389)
T PRK01278 89 --DKVFFTNSGAEA-VECAIKTARRY-----------HYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV 154 (389)
T ss_pred --CEEEEcCCcHHH-HHHHHHHHHHH-----------HHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC
Confidence 379999777775 44444332100 023444 3357777777776655554433222111 111
Q ss_pred CCC----CCCHHHHHHHHhhhccCCCceEEEEecccCcccccc----CHHHHHHHHHHhCCeEEEeccccCC-ccc--cc
Q 038499 212 DDG----LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAASGP-YVE--ID 280 (609)
Q Consensus 212 ~~g----~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~----dl~~I~~la~~~g~~vivD~A~~~~-~~~--id 280 (609)
++. ..|+++++++++ +++++++++.++|++|... .+++|.++|++||+++|+|++++.. ... ..
T Consensus 155 ~~~~~~~~~d~~~l~~~l~-----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~ 229 (389)
T PRK01278 155 PGFDQVPFGDIEALKAAIT-----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA 229 (389)
T ss_pred CCceEeCCCCHHHHHHhhC-----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee
Confidence 111 258999999997 5799999999999999543 4788999999999999999997732 211 01
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQV 359 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i 359 (609)
..... -..|++ ++.|.+++...+|++++++++ .+.+.....+ .. .+.|..
T Consensus 230 ~~~~~-~~pdi~--t~sK~l~~G~~ig~~~~~~~~--~~~~~~~~~~------------------------~t~~~~~~~ 280 (389)
T PRK01278 230 HEWAG-VTPDIM--AVAKGIGGGFPLGACLATEEA--AKGMTPGTHG------------------------STYGGNPLA 280 (389)
T ss_pred ecccC-CCCCEE--EEehhccCCcceEEEEEcHHH--HhccCCCCCC------------------------CCCCccHHH
Confidence 00110 134655 556999854458999999887 3343221100 11 122322
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
.....+++... +. +...++.+++.+++.++|+. .+++ .... .....++.+.+ .
T Consensus 281 ~aaa~a~l~~l--~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~~~v-~g~G~~~~i~~-~-------------- 337 (389)
T PRK01278 281 MAVGNAVLDVI--LA---PGFLDNVQRMGLYLKQKLEGLVDRFPDV--IEEV-RGKGLLLGLKC-V-------------- 337 (389)
T ss_pred HHHHHHHHHHH--hh---hHHHHHHHHHHHHHHHHHHHHHhhCCCc--eeeE-ecccEEEEEEE-e--------------
Confidence 22233444433 11 12333444444444444433 3322 1110 01222233222 2
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
.+...+++.|.++ ||.+.++. ++++||++++.+++++++.++
T Consensus 338 ----~~~~~~~~~l~~~-GV~~~p~~---------------------------------~~~lR~~p~~~~~~~~i~~~l 379 (389)
T PRK01278 338 ----VPNRDLVQALRDE-GLLTVGAG---------------------------------DNVVRLLPPLIITEEEIDEAL 379 (389)
T ss_pred ----cCHHHHHHHHHHC-CeEEeecC---------------------------------CCEEEEeCCcccCHHHHHHHH
Confidence 1356788888775 99887431 378999998889999999999
Q ss_pred HHHHHHHHh
Q 038499 516 EALEFIAIY 524 (609)
Q Consensus 516 ~al~~v~~~ 524 (609)
++|+++++.
T Consensus 380 ~~l~~~l~~ 388 (389)
T PRK01278 380 ERLERAAES 388 (389)
T ss_pred HHHHHHHHh
Confidence 999988754
No 257
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.80 E-value=8.2e-18 Score=181.30 Aligned_cols=293 Identities=15% Similarity=0.084 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHhC------CCCCCcEEE--eCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCLG------GGQEDAMIF--CGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~g------~~~~~~vif--t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..++|+.+++++. .+++ +|++ | .|+++++..+..++. ..+++|| .|++..+.|+.+
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~-~v~~~~t-~G~~~al~~~~~~l~------------~~~~~Gd--~Vlv~~P~y~~~ 137 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK-RIATVQA-LSGTGALRLGFEFLK------------RFLPAGT--TVYVSNPTWPNH 137 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC-eEEEeec-cCcchHHHHHHHHHH------------HhcCCCC--EEEEcCCCchhH
Confidence 4566777777652 2444 6774 5 677777777654321 0147899 799999999999
Q ss_pred HHHHHHcCceEEEEecC--CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEe
Q 038499 195 LLSWRQSLAEVVEIGLD--DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD 269 (609)
...++..|++++.+++. .++.+|++.+++++.+. .++++++++++++||||.+.+. ++|+++|++||+++++|
T Consensus 138 ~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~--~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 215 (404)
T PTZ00376 138 VNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA--PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFD 215 (404)
T ss_pred HHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 99999999999999983 34789999999998642 1356788899999999999874 56788899999999999
Q ss_pred ccccCCccc------ccCCCCCC-CCccEEEEcCCCCCCCC-CCcEEEE---Eechhhc--cCCCCCCccCCCceEeecc
Q 038499 270 FAASGPYVE------IDVRSGQT-DGYDAIFLSTHKFLGGP-GSPGILL---MTKALYQ--LGSFPPSTCGGGTVNYVNG 336 (609)
Q Consensus 270 ~A~~~~~~~------id~~~~~~-~~~D~v~~S~hK~lggp-~g~G~L~---~~~~~~~--l~~~~p~~~ggg~v~~~~~ 336 (609)
+++..-... ..+..... ...-+++.|++|.++-| ..+|+++ .++++.. +..+...
T Consensus 216 e~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~------------ 283 (404)
T PTZ00376 216 MAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLI------------ 283 (404)
T ss_pred hhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHH------------
Confidence 996522110 01111100 11247778999999843 4599984 4554310 0111000
Q ss_pred cccccccccccccccccCCC-hhHHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeC
Q 038499 337 FNEKDTLYLEDIEERESGGT-PQVIQMIRAALAFWVKEY-------IGHEVIKKQEETYIERALERLLPNQ---NIKILG 405 (609)
Q Consensus 337 ~~~~~~~~~~~~~~r~~~gt-p~i~~~~~aal~~~~~~~-------~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~ 405 (609)
.+...++ +.+.+.+ +..++ ++. ...+.++++.++.++.+.+.|+++. ++.++.
T Consensus 284 -------------~~~~~~~~~~~~q~~--~~~~l-~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 347 (404)
T PTZ00376 284 -------------IRPMYSSPPIHGARI--ADRIL-SDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHII 347 (404)
T ss_pred -------------HhhhcCCCchHHHHH--HHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 0001112 2233321 11111 110 0123445566777888888887652 233333
Q ss_pred CCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHH
Q 038499 406 NTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSA 485 (609)
Q Consensus 406 ~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~ 485 (609)
+ ..+.+.|.-. ..++++.|.+++||.+.+
T Consensus 348 p----~gg~f~~~~~---------------------~~~~~~~L~~~~~v~v~p-------------------------- 376 (404)
T PTZ00376 348 N----QIGMFSFTGL---------------------TKEQVERLIEKYHIYLLD-------------------------- 376 (404)
T ss_pred c----CceEEEecCC---------------------CHHHHHHHHHhCCEeecC--------------------------
Confidence 2 3344444322 246677787878998762
Q ss_pred HhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 486 IQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 486 ~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+. |||++. .+.++++.++++|+.++..
T Consensus 377 ----------~~-Ris~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 377 ----------NG-RISVAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred ----------CC-eEEEec-cCHHhHHHHHHHHHHHHhc
Confidence 33 999954 6899999999999988653
No 258
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.79 E-value=2.1e-17 Score=160.71 Aligned_cols=395 Identities=17% Similarity=0.163 Sum_probs=272.5
Q ss_pred HHHHHHHHHhhccCCC-cccc--CC---CCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHH-HHH
Q 038499 51 SEKKLTWLQSQIIGKN-AEFD--SP---FGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTT-NMV 123 (609)
Q Consensus 51 ~~~~~~~~r~~~~g~~-~~~~--~p---~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~-~~~ 123 (609)
.++.++.+|+.|.... ..+. +| .-..+.||+=.++.|..|..+.+.+.+++.. |+.-....+..|...+ ..-
T Consensus 35 ~~d~l~~~Rd~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~~~D 113 (465)
T KOG3846|consen 35 GSDYLESLRDEFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWVSID 113 (465)
T ss_pred cchhHHHHHHHhcCCccccCCCCCccccCCCCCeEEEeccccccCchhhHhHHHHHHHH-HHhhhhhcccccccceeecc
Confidence 3578899999985321 0000 11 1235789999999999999999998877754 3333332233343322 222
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccc----hHHHH
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHS----NLLSW 198 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s----~~~~~ 198 (609)
+-.-..++..+|+..+ +|.++ +.-|.+++.++..+- +|. .|..|+...-.++| ....+
T Consensus 114 e~il~l~~~iVGA~e~-Evavm-NsLTvNlh~Ll~sFy---------------KPTekR~KILlE~kaFPSDhYAiesQ~ 176 (465)
T KOG3846|consen 114 EPILPLLAPIVGAQEN-EVAVM-NSLTVNLHSLLISFY---------------KPTEKRFKILLEKKAFPSDHYAIESQC 176 (465)
T ss_pred hhhhhhhhhhccCCch-hhhhH-hhhhhHHHHHHHHhc---------------CCcchhhhhhhccCCCCchHHHHHhhh
Confidence 3456778999999987 89888 788889998877662 333 34457766555554 44555
Q ss_pred HHcCceE--EEEecCC---CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 199 RQSLAEV--VEIGLDD---DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 199 ~~~G~~v--v~v~~~~---~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
+..|..+ ..+-+.+ ...+..+++.+.|.+. .+...+|+|+.++..||...|+.+|...-+..|+++-+|-||+
T Consensus 177 ~lhG~~~e~sm~~iePREGEetlRteDILd~IEkn--gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 177 KLHGISPENSMIQIEPREGEETLRTEDILDTIEKN--GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred hhcCCChHHheEEecccccccchhHHHHHHHHHhc--CCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhh
Confidence 6667653 2222222 3357778888888753 2567799999999999999999999965556799999999999
Q ss_pred CCcccccCCCCCCCCccEEEEcCCCCC-CCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 274 GPYVEIDVRSGQTDGYDAIFLSTHKFL-GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 274 ~~~~~id~~~~~~~~~D~v~~S~hK~l-ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
++.+++.+..+ ++|+.+...+|++ .|++|+|-+.+..+. .....|...||.......+|..+....+....-.+
T Consensus 255 vgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh--~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~Gf 329 (465)
T KOG3846|consen 255 VGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKH--TKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGF 329 (465)
T ss_pred hcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhh--hcchhhHHhhhccCCcchhhhhccccccCcccccc
Confidence 99999998887 9999999999998 457889999999888 55677777787555555555555555566666777
Q ss_pred cCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc-----------eEEeCCCC-CCCcceEEEE
Q 038499 353 SGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN-----------IKILGNTS-TKRQAILSFN 418 (609)
Q Consensus 353 ~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~-----------i~v~~~~~-~~r~~~~~f~ 418 (609)
+...|++...+ ++++++. .+..++.++.+..-+..|+...++...| +.|+.|.. ..|..-+++.
T Consensus 330 RiSNPpi~~v~al~~SLe~F--~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~ 407 (465)
T KOG3846|consen 330 RISNPPIIDVVALRSSLELF--AQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLY 407 (465)
T ss_pred ccCCCcHhHHHHHHhhHHHH--HHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEE
Confidence 77888876654 5566655 5566888888877777766665554322 33444432 2333333333
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
... ....|...|.+ .|+..- ..+|+.|
T Consensus 408 Fss-------------------p~~~vfqeL~k-rGv~~D---------------------------------kR~PNvI 434 (465)
T KOG3846|consen 408 FSS-------------------PTPKVFQELHK-RGVIGD---------------------------------KRRPNVI 434 (465)
T ss_pred eCC-------------------CchHHHHHHHH-cCeecc---------------------------------ccCCCce
Confidence 322 23567777755 365432 1158999
Q ss_pred EEec-CCCCCHHHHHHHHHHHHHHHHhc
Q 038499 499 RISF-PYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 499 Rls~-~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|+.. +.|||..|+-.++.+|.+++...
T Consensus 435 RvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 435 RVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred EeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 9996 89999999999999999988654
No 259
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.79 E-value=7.7e-17 Score=161.50 Aligned_cols=325 Identities=19% Similarity=0.191 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH---
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (609)
.....++++|+.+-|.-.. +.+ .||..+....++.+ .++|| .|+.++.-|......
T Consensus 62 PT~~vlE~RiAaLEGG~aa--~a~-aSG~AA~~~ai~~l----------------a~aGD--~iVss~~LYGGT~~lf~~ 120 (426)
T COG2873 62 PTTDVLEERIAALEGGVAA--LAV-ASGQAAITYAILNL----------------AGAGD--NIVSSSKLYGGTYNLFSH 120 (426)
T ss_pred chHHHHHHHHHHhhcchhh--hhh-ccchHHHHHHHHHh----------------ccCCC--eeEeeccccCchHHHHHH
Confidence 3456688899999887543 444 47776544444333 37999 788888877765543
Q ss_pred -HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 198 -WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 198 -~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
++..|.++++|+.+ |++.++++|+ ++||+|++....||-+.+.|+++|+++||++|++++||.+-+.|+
T Consensus 121 tl~~~Gi~v~fvd~~-----d~~~~~~aI~-----~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpy 190 (426)
T COG2873 121 TLKRLGIEVRFVDPD-----DPENFEAAID-----ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPY 190 (426)
T ss_pred HHHhcCcEEEEeCCC-----CHHHHHHHhC-----cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcce
Confidence 46789999999865 7999999999 799999999999999999999999999999999999999988876
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
.--.++ .|+|+|+-|..||+||-+. +|-+++.-..+.... ...++. +...+..|.. ....+..|
T Consensus 191 l~rP~~----hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~-~~rfP~---------~~~p~p~YhG-l~~~~~~g 255 (426)
T COG2873 191 LCRPIE----HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTA-NGRFPE---------FTTPDPSYHG-LVYTETFG 255 (426)
T ss_pred ecchhh----cCCCEEEEeecccccCCccccceEEEeCCcccccc-CCCCcc---------cCCCCccccc-eehhhhcc
Confidence 543333 2899999999999998753 666666544421110 000000 0111111110 01111223
Q ss_pred ChhHHHHHHHH------------HHHHHHHhcCHH---HHHHHHHHHHHHHHHHhCCCCceEEeCCCC------------
Q 038499 356 TPQVIQMIRAA------------LAFWVKEYIGHE---VIKKQEETYIERALERLLPNQNIKILGNTS------------ 408 (609)
Q Consensus 356 tp~i~~~~~aa------------l~~~~~~~~g~~---~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~------------ 408 (609)
.+.+.-.++.- -+|++ ..|.| -..+|..+++..+.+.|.++|.+.-+.-..
T Consensus 256 ~~af~~~~r~~~lRDlGa~lsPfnAfl~--lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~k 333 (426)
T COG2873 256 NAAFIIKARVQLLRDLGATLSPFNAFLL--LQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKK 333 (426)
T ss_pred cHHHHHHHHHHHHHhcccccCcHHHHHH--HhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHh
Confidence 33322211100 11221 23444 345677778889999999988775432211
Q ss_pred ---CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHH
Q 038499 409 ---TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQI 482 (609)
Q Consensus 409 ---~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~ 482 (609)
....++++|-+.+ +. -....++..| +++--.+.-|..-+ +|.+.....+++++..
T Consensus 334 yl~~g~g~vltF~~kg-g~---------------ea~~~fi~~l-~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~-- 394 (426)
T COG2873 334 YLPKGAGAVLTFGVKG-GY---------------EAGKKFIDAL-KLFSHLANIGDARSLVIHPASTTHRQLSEEEQA-- 394 (426)
T ss_pred hccCCCceEEEEEecC-hH---------------HHHHHHHHHH-HHHHhhccccccceeEecCcccchhcCCHHHHH--
Confidence 1234588888887 32 1234454444 33333344343211 2434333444443322
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
-.|+.|+.||+|++. |+++.+++-|+..++
T Consensus 395 -------~aGv~~~~IRlSVGI----Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 395 -------AAGVTPDLIRLSVGI----EDIDDIIADLEQALE 424 (426)
T ss_pred -------hcCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence 257889999999985 667777777776554
No 260
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=4e-18 Score=159.80 Aligned_cols=166 Identities=20% Similarity=0.243 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~ 201 (609)
+.++++.++++++.+.+ .++++. |+++++..++..+. ++++ .|+++...|++.. ..+...
T Consensus 2 ~~~~~~~l~~~~~~~~~-~~~~~~-~~t~a~~~~~~~~~---------------~~~~--~v~~~~~~~~~~~~~~~~~~ 62 (170)
T cd01494 2 LEELEEKLARLLQPGND-KAVFVP-SGTGANEAALLALL---------------GPGD--EVIVDANGHGSRYWVAAELA 62 (170)
T ss_pred HHHHHHHHHHHcCCCCC-cEEEeC-CcHHHHHHHHHHhC---------------CCCC--EEEEeecccceehhhHHHhc
Confidence 46789999999975554 788884 66678888887763 4566 6999999999988 777888
Q ss_pred CceEEEEecCCCCCCCH--HHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 202 LAEVVEIGLDDDGLLDI--EALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 202 G~~vv~v~~~~~g~ld~--e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
|++++.++.+.++..+. +.+++.... ++++++++++++|++|...|+++|.++|+++|+++|+|++++.+....
T Consensus 63 g~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~ 138 (170)
T cd01494 63 GAKPVPVPVDDAGYGGLDVAILEELKAK----PNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPA 138 (170)
T ss_pred CCEEEEeccCCCCccchhhhhhhhcccc----CceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccc
Confidence 99999999876554333 255444332 688999999999999999999999999999999999999999877665
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
........++|+++.|+||++|+ .+.|++++|
T Consensus 139 ~~~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 139 PGVLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 22111123789999999999998 568999875
No 261
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.79 E-value=1.3e-16 Score=162.71 Aligned_cols=341 Identities=20% Similarity=0.189 Sum_probs=219.0
Q ss_pred ccCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeC-ChHHHHHHHH--HHHhcccchhhHHHHHHhhhcCCC
Q 038499 105 YGNTHTCDS-YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCG-SGTTAAIKRL--QEVMGIAVPSILREKLIKCLRDEE 180 (609)
Q Consensus 105 ~~n~~~~~~-~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~-sGttaal~~l--~~~l~~~~~~~~~~~~~~~l~~gd 180 (609)
++|.|.-.. ..-.+..+++.++++++++..|.+ +|.+.. +|+..=..-+ ++.+.. .-..+.
T Consensus 92 f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll~Ir~YHe------------~rG~~~ 156 (496)
T COG1003 92 FANIHPFQPEEQVQGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLLAIRAYHE------------SRGEGH 156 (496)
T ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHHHHHHHHH------------HcCCCc
Confidence 456555321 123356788999999999999985 555543 3554422222 122210 012445
Q ss_pred ceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc-cCHHHHHHHH
Q 038499 181 RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY-SDTRSIARLL 259 (609)
Q Consensus 181 ~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~-~dl~~I~~la 259 (609)
|.+|++++..|..|-.++...|.+|+.|+.+++|.+|+++|++++. +++..+.+++||+ .|+. .++.+|+++.
T Consensus 157 R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~-----~~~AalMiTnPsT-~GvFE~~I~ei~~iv 230 (496)
T COG1003 157 RNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAE-----DNLAALMITNPST-LGVFEEDIREICEIV 230 (496)
T ss_pred CcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhc-----cceeEEEeccCcc-cccchhhHHHHHHHH
Confidence 6799999999999999999999999999999999999999999998 6888889988865 4777 6799999999
Q ss_pred HHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC-----CCcEEEEEechhhccCCCCCCccCCCceEee
Q 038499 260 HQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP-----GSPGILLMTKALYQLGSFPPSTCGGGTVNYV 334 (609)
Q Consensus 260 ~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp-----~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~ 334 (609)
|++|..+..|+|..-..+.+ .+++. -|.|++-++.||.|..| .|.|-+.+++.+ .. +.++--. ..
T Consensus 231 H~~Gg~vY~DGANlNA~vG~-~rPGd-~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L--~p----fLP~p~~-~~- 300 (496)
T COG1003 231 HEAGGQVYYDGANLNAIVGL-ARPGD-MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHL--AP----FLPGPVV-YH- 300 (496)
T ss_pred HHcCCEEEecCcchhhhhcc-ccccc-cccceEEeecccccccCCCCCCCCCCceehHhhc--cc----cCCCCcc-cC-
Confidence 99999999999954222211 11211 17899999999999544 236778888777 22 2222100 00
Q ss_pred ccccccccccccc-------ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCC
Q 038499 335 NGFNEKDTLYLED-------IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNT 407 (609)
Q Consensus 335 ~~~~~~~~~~~~~-------~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~ 407 (609)
....|..+ ....--.|+..++....+-+... ...|....-+...-+++|+.++|+. .+.++-..
T Consensus 301 -----~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~m--G~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~ 371 (496)
T COG1003 301 -----DVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMM--GADGLKQASEVAVLNANYIARRLKG--YYPVPYTG 371 (496)
T ss_pred -----CCccccccCCCCccceeeccccCcchHHHHHHHHHHHH--hHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCC
Confidence 00011100 01112234445544433332222 3446666666667789999999986 45553322
Q ss_pred CCCCcce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHH
Q 038499 408 STKRQAI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAI 486 (609)
Q Consensus 408 ~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~ 486 (609)
. .+..+ +.+...+ . ..+.++...+|+++|.| ||+-.-.-.+. | -
T Consensus 372 ~-~~~~HE~ild~r~--l----------~~~~Gv~~~DvAKrLlD-~GfHaPT~~FP-------l-i------------- 416 (496)
T COG1003 372 E-NRVAHECILDARP--L----------KKETGVRALDVAKRLLD-YGFHAPTMYFP-------L-I------------- 416 (496)
T ss_pred C-CcceeEEEeechH--h----------HhhcCCcHHHHHHHHHh-cCCCCCcccCc-------c-c-------------
Confidence 1 12222 2222222 1 13445889999999998 79865433221 0 0
Q ss_pred hhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 487 QKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 487 ~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
-++.+-|=..-.-|++|+|++++++..++++...
T Consensus 417 -------V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 417 -------VAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred -------cccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1467777777778999999999999999987654
No 262
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=3.5e-17 Score=173.19 Aligned_cols=312 Identities=20% Similarity=0.197 Sum_probs=190.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc
Q 038499 114 YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS 193 (609)
Q Consensus 114 ~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s 193 (609)
.+++........+++.|+++.|+. .++.++||.. ||..++..+ +++|| .|+++...|..
T Consensus 48 ~Y~R~gnPt~~~le~~la~Le~g~---~a~~~~SGma-Ai~~~l~~l---------------l~~Gd--~iv~~~~~Y~~ 106 (386)
T PF01053_consen 48 IYSRYGNPTVRALEQRLAALEGGE---DALLFSSGMA-AISAALLAL---------------LKPGD--HIVASDDLYGG 106 (386)
T ss_dssp SBTTTC-HHHHHHHHHHHHHHT-S---EEEEESSHHH-HHHHHHHHH---------------S-TTB--EEEEESSSSHH
T ss_pred ceeccccccHHHHHHHHHHhhccc---ceeeccchHH-HHHHHHHhh---------------cccCC--ceEecCCccCc
Confidence 345555666788999999999984 3444457777 565555544 47898 68888888877
Q ss_pred hHHHHH----HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC-CeEEE
Q 038499 194 NLLSWR----QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG-GFACF 268 (609)
Q Consensus 194 ~~~~~~----~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g-~~viv 268 (609)
....++ ..|+++.+++.. |+++|+++++ +++++|++..++||+..+.|+++|+++||++| ++++|
T Consensus 107 t~~~~~~~l~~~gv~v~~~d~~-----d~~~l~~~l~-----~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vV 176 (386)
T PF01053_consen 107 TYRLLEELLPRFGVEVTFVDPT-----DLEALEAALR-----PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVV 176 (386)
T ss_dssp HHHHHHHCHHHTTSEEEEESTT-----SHHHHHHHHC-----TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEE
T ss_pred chhhhhhhhcccCcEEEEeCch-----hHHHHHhhcc-----ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEe
Confidence 665544 469999998754 8999999999 68999999999999999999999999999999 99999
Q ss_pred eccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec--hhhccCCCCCCccCCCceEeecccccccccc
Q 038499 269 DFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK--ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 269 D~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~--~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
|.+.+.|+. .+++. .|+|+++.|..|+++|... .|+++++. +++ +.+..
T Consensus 177 DnT~atp~~---~~pL~-~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~--~~l~~--------------------- 229 (386)
T PF01053_consen 177 DNTFATPYN---QNPLE-LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELY--DRLRE--------------------- 229 (386)
T ss_dssp ECTTTHTTT---C-GGG-GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHH--HHHHH---------------------
T ss_pred eccccceee---eccCc-CCceEEEeeccccccCCcceeeEEEEECchhhhh--hhhcc---------------------
Confidence 999876643 22221 2799999999999997753 57888776 331 11100
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCC--C-----------CC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNT--S-----------TK 410 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~--~-----------~~ 410 (609)
..+....+.+-.. +- +.+.....+....++..+.+..+.+.|+++|.++ |+-|. + ..
T Consensus 230 ----~~~~~G~~~~p~d---a~--ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g 300 (386)
T PF01053_consen 230 ----FRRLLGATLSPFD---AW--LLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSG 300 (386)
T ss_dssp ----HHHHHT-B--HHH---HH--HHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSS
T ss_pred ----hhhhcCccchHHH---HH--HHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccc
Confidence 0011111111111 11 1111223455666777888999999999999886 65442 1 12
Q ss_pred CcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHh
Q 038499 411 RQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQ 487 (609)
Q Consensus 411 r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~ 487 (609)
..++++|.+.. +. -....+.+.| +.+.+.+.-|...+ .|.......+.++...
T Consensus 301 ~ggl~sf~l~~-~~---------------~~~~~f~~~l-~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~------- 356 (386)
T PF01053_consen 301 GGGLLSFELKG-GE---------------EAARRFLDAL-KLFSIAPSLGGVESLISHPASTSHRSLSPEERA------- 356 (386)
T ss_dssp CTSEEEEEESS-HH---------------HHHHHHHHH--SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHH-------
T ss_pred cCceeEEEecc-ch---------------hhhHhHHhhh-hhHhhhhhcCCcccccccccchhhccCChhhhh-------
Confidence 44688998886 21 0234555555 44555555554332 1322222233332211
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 488 KGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 488 ~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..|+.++.||||+|. |+.+.+++.|+..+
T Consensus 357 --~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL 385 (386)
T PF01053_consen 357 --EAGISDGLIRLSVGL----EDPDDLIADLEQAL 385 (386)
T ss_dssp --HTTS-TTEEEEE--S----S-HHHHHHHHHHHH
T ss_pred --ccCCCCCeeEEEecc----CCHHHHHHHHHHhc
Confidence 146678999999996 45555666555543
No 263
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=3e-17 Score=165.57 Aligned_cols=300 Identities=15% Similarity=0.108 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
.++..+..+++++++++.+|. . +++|+.+||.++.-.+... .+|++ .|++.+..|-...
T Consensus 30 ~YG~D~~~~~~e~~~ae~~g~--~-a~~Fv~sGT~aN~lal~~~----------------~~~~~--~vi~~~~aHi~~~ 88 (342)
T COG2008 30 VYGEDPTTNALEQRIAELFGK--E-AALFVPSGTQANQLALAAH----------------CQPGE--SVICHETAHIYTD 88 (342)
T ss_pred CCCCCHHHHHHHHHHHHHhCC--c-eEEEecCccHHHHHHHHHh----------------cCCCC--eEEEeccccceec
Confidence 344566788999999999999 3 6889989998765555433 37888 6999998887654
Q ss_pred HH--HHH-cCceEEEEecCCCCCCCHHHHHHHHhhhc--cCCCceEEEEecccCccccccCHH---HHHHHHHHhCCeEE
Q 038499 196 LS--WRQ-SLAEVVEIGLDDDGLLDIEALRSKLELYK--DAKRPILGSFSACSNVTGIYSDTR---SIARLLHQYGGFAC 267 (609)
Q Consensus 196 ~~--~~~-~G~~vv~v~~~~~g~ld~e~L~~al~~~~--~~~~~~lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vi 267 (609)
.. ... .++....+....+|.+++++++++|.... +.+.++++++ +..|.-|.++|++ +|.++||+||+.++
T Consensus 89 E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e-~~~te~GtVy~l~el~~i~~~~k~~~l~LH 167 (342)
T COG2008 89 ECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE-NTATEGGTVYPLDELEAISAVCKEHGLPLH 167 (342)
T ss_pred ccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe-eccCCCceecCHHHHHHHHHHHHHhCCcee
Confidence 21 122 23333334445689999999999987521 2233445444 4445779999865 57888999999999
Q ss_pred Eeccc---cCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 268 FDFAA---SGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 268 vD~A~---~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
.|+|- +.....++...+ ..++|+++++++|.+|.|.| .+|+.+.++. +.....
T Consensus 168 mDGAR~~nA~valg~~~~~~-~~~~D~v~~~~tK~g~~~~g-Aiv~gn~~~~--~~a~~~-------------------- 223 (342)
T COG2008 168 MDGARLANALVALGVALKTI-KSYVDSVSFCLTKGGGAPVG-AIVFGNRDFA--KRARRW-------------------- 223 (342)
T ss_pred echHHHHHHHHHcCCCHHHH-HhhCCEEEEecccCCcceee-eEEEcCHHHH--HHHHHH--------------------
Confidence 99982 221222332222 23789999999999998875 8888888883 222110
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
++..+|-..-..++.+.....+++.. ......+..+++.++.+.+...||+++..+. -.+..|...+ .
T Consensus 224 -----rK~~Ggl~~k~r~laA~~~~~l~~~~-~~~~~~Han~mA~~La~~~~~~~G~~~~~~~----~tN~vf~~l~-~- 291 (342)
T COG2008 224 -----RKRAGGLMRKARFLAAQGLYALEDDV-WRLAADHANAMAARLAEGLEAKPGVKLAFPV----ETNMVFVRLP-E- 291 (342)
T ss_pred -----HHHhcccHhhhhHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHhhhhcCCceeccCC----cccEEEEECC-h-
Confidence 11112222223344444444444332 4455667777899999999988999998763 2455566555 1
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCC-cEEEEecC
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP-GWTRISFP 503 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~-g~iRls~~ 503 (609)
...+.|.. .|+....|. +.+ .. ..+|+..+
T Consensus 292 -------------------~~i~~l~~-~~~~~~~~~---------~~~--------------------~~~~~vRfvts 322 (342)
T COG2008 292 -------------------SAIEALRL-AGALFYRGV---------LIG--------------------AHGEIVRFVTS 322 (342)
T ss_pred -------------------HHHHHHHh-hchhheeee---------ecc--------------------CCCceEEEEee
Confidence 12234422 244433211 100 01 26999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 038499 504 YYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~ 522 (609)
+-+|+++++.++..++.++
T Consensus 323 ~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 323 WATSEEDVDELVAAIKALL 341 (342)
T ss_pred ccCCHHHHHHHHHHHHHhh
Confidence 9999999999999998865
No 264
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=8.7e-17 Score=171.84 Aligned_cols=339 Identities=16% Similarity=0.145 Sum_probs=195.8
Q ss_pred CccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++....|+ -|+|..+ .|..++.|.+++.+.+.... .... . .......++++++++++|.+
T Consensus 18 g~~~~~~~g~---~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~----~--~~~~~~~~l~~~la~~~g~~-- 85 (379)
T TIGR00707 18 GAYVYDVNGK---EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV-HVSN----L--YYTEPQEELAEKLVEHSGAD-- 85 (379)
T ss_pred cCEEEeCCCC---EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc-cccc----c--cCCHHHHHHHHHHHhhCCCC--
Confidence 3444444453 2666544 35666889999988876531 1111 0 12356788999999999874
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCCceEEEECCCCccchHHHHHHcCceEE----EEecCCCC
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEERWVVFVGPHEHHSNLLSWRQSLAEVV----EIGLDDDG 214 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv----~v~~~~~g 214 (609)
+++++.+| ++++..+++++.... ...+ +++ .|++.+..||.........+.... ..+...+.
T Consensus 86 -~~~~~~sg-~~a~~~a~~~~~~~~---------~~~~~~~~--~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T TIGR00707 86 -RVFFCNSG-AEANEAALKLARKYT---------GDKGKEKK--KIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGF 152 (379)
T ss_pred -EEEEeCCc-HHHHHHHHHHHHHHh---------hccCCCCC--eEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCc
Confidence 67887445 445665555432000 0001 245 466666666654433333333221 12222221
Q ss_pred C----CCHHHHHHHHhhhccCCCceEEEEecccCcccccc-C---HHHHHHHHHHhCCeEEEecccc-CCccc--ccCCC
Q 038499 215 L----LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS-D---TRSIARLLHQYGGFACFDFAAS-GPYVE--IDVRS 283 (609)
Q Consensus 215 ~----ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~-d---l~~I~~la~~~g~~vivD~A~~-~~~~~--id~~~ 283 (609)
. -|+++|++.++ ++++++++++++|++|... + +++|.++|++||+++++|++++ .+... ..+..
T Consensus 153 ~~~~~~d~~~l~~~~~-----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~ 227 (379)
T TIGR00707 153 SYAPYNDIESLKKAID-----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEH 227 (379)
T ss_pred eeeCCCCHHHHHHHhh-----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHh
Confidence 1 18999999997 5789999988888888753 3 7899999999999999999976 32211 11111
Q ss_pred CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH
Q 038499 284 GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI 363 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~ 363 (609)
. ....|++ +++|.++++.++|++++++++ ++.+.+...+ ..+ .+.+.....+
T Consensus 228 ~-~~~~d~~--t~sK~~~~G~riG~~~~~~~~--~~~~~~~~~~----------------------~~~-~~~~~~~~aa 279 (379)
T TIGR00707 228 Y-GIEPDII--TLAKGLGGGVPIGATLAKEEV--AEAFTPGDHG----------------------STF-GGNPLACAAA 279 (379)
T ss_pred c-CCCCCEE--EEcccccCCcccEEEEEcHHH--HhhhcCCCCC----------------------CCC-CCCHHHHHHH
Confidence 1 0134655 457999955569999999887 4444321100 000 1222222223
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChH
Q 038499 364 RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGP 443 (609)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 443 (609)
.+++... + ...+.++.++++++++++|.++ +.......-.....++++.+.. ...
T Consensus 280 ~aaL~~~--~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~-------------------~~~ 334 (379)
T TIGR00707 280 LAVLEVI--E---KERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEA-------------------PCK 334 (379)
T ss_pred HHHHHHH--H---hhhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecC-------------------cHH
Confidence 3444432 1 1235566666777777766543 1111001000122334443322 256
Q ss_pred HHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 444 FVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 444 ~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.+.+.|.+ .||.++++ .++++|+++++..|++++++++++|+++
T Consensus 335 ~~~~~l~~-~Gv~v~~~---------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 335 DIVKKALE-KGLLVNCA---------------------------------GPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred HHHHHHHH-CCcEEeeC---------------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 78888865 69998842 1378999999889999999999999875
No 265
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.78 E-value=3.2e-17 Score=158.61 Aligned_cols=335 Identities=18% Similarity=0.153 Sum_probs=233.1
Q ss_pred eEEecCCCCCCC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASGRS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+-|+-|+..|.+ .+.|.++-++.+.++-+.+.+.. .-.++..+...+++.||++.+.+ |.|++ .++-.++...+
T Consensus 70 lnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvr--fIcGtq~iHk~LE~kiAqfh~rE--D~ily-pscfdANag~f 144 (417)
T KOG1359|consen 70 LNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVR--FICGTQDIHKLLESKIAQFHGRE--DTILY-PSCFDANAGAF 144 (417)
T ss_pred eeecccccccccCChHHHHHHHHHHHHhCCCcccee--EEecchHHHHHHHHHHHHHhCCC--ceEEe-ccccccchHHH
Confidence 344545555544 46788888888877655454432 33346778889999999999976 34555 47777655544
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
..+ +.|.| .|+.....|.|.+...+... ..+++|+-+|+..+.+... .+-++
T Consensus 145 eai----------------l~ped--AvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k-~r~kl 196 (417)
T KOG1359|consen 145 EAI----------------LTPED--AVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACK-MRLKL 196 (417)
T ss_pred HHh----------------cChhh--hhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhh-heEEE
Confidence 333 35777 69999999999988776432 3456788888877764211 36789
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCC---CC--CCCCccEEEEcCCCCCCCCCCcEEEEE
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVR---SG--QTDGYDAIFLSTHKFLGGPGSPGILLM 311 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~---~~--~~~~~D~v~~S~hK~lggp~g~G~L~~ 311 (609)
|+-...-++.|.+.|+++|..++++||+++++|++|+.+.....-. +. -...+|++..+..|.+||..| |+...
T Consensus 197 v~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttg 275 (417)
T KOG1359|consen 197 VVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTG 275 (417)
T ss_pred EEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccC
Confidence 9999999999999999999999999999999999998654332111 10 124689999999999998876 99999
Q ss_pred echhhcc-C-CCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 312 TKALYQL-G-SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 312 ~~~~~~l-~-~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++.+..+ + +.+|+.+. ..-.|.+++....++++++. ...+.++.+...+
T Consensus 276 p~~li~llrqr~RpylFS-------------------------nslppavV~~a~ka~dllm~----s~~~i~~~~a~~q 326 (417)
T KOG1359|consen 276 PKPLISLLRQRSRPYLFS-------------------------NSLPPAVVGMAAKAYDLLMV----SSKEIQSRQANTQ 326 (417)
T ss_pred ChhHHHHHHhcCCceeec-------------------------CCCChhhhhhhHHHHHHHHh----hHHHHHHHHHHHH
Confidence 9888331 1 11222110 12246777777777776643 3455667778888
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++++..... |+.|.+. ..||....+.+ .. ....+++.|++. ||.|-+-.....|.+
T Consensus 327 rfr~~me~a-GftIsg~----~hPI~pv~lGd-a~----------------lA~~~ad~lLk~-Gi~Vigfs~PvVP~g- 382 (417)
T KOG1359|consen 327 RFREFMEAA-GFTISGA----SHPICPVMLGD-AR----------------LASKMADELLKR-GIYVIGFSYPVVPKG- 382 (417)
T ss_pred HHHHHHHhc-CceecCC----CCCccceeccc-HH----------------HHHHHHHHHHhc-CceEEeecCCcCCCC-
Confidence 888877654 9999876 34777666655 21 345677777764 999884433222211
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
...||+.++..+|+||||++++++.++.+.
T Consensus 383 -------------------------kariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 383 -------------------------KARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred -------------------------ceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 356899998899999999999999988764
No 266
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.78 E-value=3.4e-17 Score=176.09 Aligned_cols=170 Identities=18% Similarity=0.115 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHhC------CCCCCcE--EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCLG------GGQEDAM--IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~g------~~~~~~v--ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..++|+.+++++. .+++ +| ++| +|+++++..+++.+. .+++|| .|+++.+.|+.+
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~-~i~v~iT-~Ga~~al~~~~~~l~-------------~~~pGd--~Vlv~~P~y~~~ 133 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAG-RVATVQT-PGGTGALRVGADFLK-------------RAFPDA--KVWVSDPTWPNH 133 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccC-eEEEEec-CCccHHHHHHHHHHH-------------HhCCCC--eEEECCCCcccH
Confidence 4556666666642 1344 65 777 899999998877653 136899 799999999999
Q ss_pred HHHHHHcCceEEEEec-C-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEe
Q 038499 195 LLSWRQSLAEVVEIGL-D-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~-~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD 269 (609)
...++..|++++.++. + +++.+|+++|++++++. .++++++++++++||||.+.+. ++|+++|++||+++|+|
T Consensus 134 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 211 (396)
T PRK09257 134 RAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA--PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLD 211 (396)
T ss_pred HHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 9999999999999997 3 34679999999988742 1345788889999999999884 56888999999999999
Q ss_pred ccccCCccc-----ccCCCCC-CCCccEEEEcCCCCCCCC-CCcEEEEE
Q 038499 270 FAASGPYVE-----IDVRSGQ-TDGYDAIFLSTHKFLGGP-GSPGILLM 311 (609)
Q Consensus 270 ~A~~~~~~~-----id~~~~~-~~~~D~v~~S~hK~lggp-~g~G~L~~ 311 (609)
+++..-... ..+..+. ....-+++.|++|.++.| ..+|++++
T Consensus 212 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 212 IAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred ccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 996532110 1111110 012247788999999843 45999984
No 267
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.78 E-value=1.2e-16 Score=160.25 Aligned_cols=345 Identities=14% Similarity=0.125 Sum_probs=230.7
Q ss_pred CceEEecCCCCCCC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH---
Q 038499 76 RRLTYADHTASGRS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA--- 151 (609)
Q Consensus 76 ~~~vyld~~a~g~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta--- 151 (609)
+-.||+.+-..+-+ .+.|.+++.+.+...-+..+..... .+......++++.+|++.+-+. .++|+ |.-.+
T Consensus 172 ~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNI--sG~s~~hv~LE~eLA~LHqK~a--ALlFs-SCfVANDs 246 (570)
T KOG1360|consen 172 KVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNI--SGHSKHHVRLEAELADLHQKEA--ALLFS-SCFVANDS 246 (570)
T ss_pred ceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCcccc--CCCCchhhhHHHHHHHHhcCcc--eeeee-eeeeccch
Confidence 34578744433322 3568899988876653222211111 1234556778899999999764 47775 43322
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~ 231 (609)
.+..+.+.+ ||- +|+.....|.|++...|.++++-.....+ |++.|++.|++. ..
T Consensus 247 tLftLak~l-----------------pgc--ei~SD~gNHASMI~GIrns~v~K~IFrHN-----D~~hL~~lL~~~-~~ 301 (570)
T KOG1360|consen 247 TLFTLAKKL-----------------PGC--EIFSDEGNHASMIQGIRNSRVPKHIFRHN-----DLDHLEQLLQSS-PK 301 (570)
T ss_pred HHHHHHHHC-----------------CCc--EEeccccchHHHHHHhhhcCCcceeeccC-----CHHHHHHHHHhC-CC
Confidence 344444433 444 78888999999999999988876666655 899999999753 22
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc-----ccCCCCCCCCccEEEEcCCCCCCCCCCc
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE-----IDVRSGQTDGYDAIFLSTHKFLGGPGSP 306 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~-----id~~~~~~~~~D~v~~S~hK~lggp~g~ 306 (609)
..||+|.|..+++++|.+.|+++|++++|+||++.++|+.|+.|.-. +.-+++....+|+++.+.-|.||..+
T Consensus 302 svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG-- 379 (570)
T KOG1360|consen 302 SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG-- 379 (570)
T ss_pred CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc--
Confidence 47899999999999999999999999999999999999998865321 11122223457999999999999665
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG-TPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
|++.....++ +-++.+..| . -+... .|.++.-...++.++ +...|. .++...+
T Consensus 380 GYIAat~~Lv--DmiRSyAaG-F---------------------IFTTSLPP~vl~GAleaVr~l-k~~eg~-~lR~~hq 433 (570)
T KOG1360|consen 380 GYIAATRKLV--DMIRSYAAG-F---------------------IFTTSLPPMVLAGALEAVRIL-KSEEGR-VLRRQHQ 433 (570)
T ss_pred ceehhhhhHH--HHHHHhcCc-e---------------------EEecCCChHHHHhHHHHHHHH-hhhhhH-HHHHHHH
Confidence 7888888883 333222111 0 01111 234444334444443 333343 3445566
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+...++++.|.++ |+.|+..+ .-|+-..+.+ . ....++++.|..++||.+..--....
T Consensus 434 rnv~~~kq~l~~~-GiPVi~~p----SHIiPv~vgd-a----------------~l~~~~sd~Li~~h~iYvQaINyPTV 491 (570)
T KOG1360|consen 434 RNVKYVKQLLMEL-GIPVIPNP----SHIIPVRVGD-A----------------ALAKQASDILISKHNIYVQAINYPTV 491 (570)
T ss_pred HHHHHHHHHHHHc-CCcccCCC----cceeeeeccC-H----------------HHHHHHHHHHHHhcCeEEEeccCCcc
Confidence 7788999999887 88777652 2444445544 2 24568888888899999874322221
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+. ....+||...+..|++-++.+++++..+-....
T Consensus 492 ~r--------------------------G~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 492 AR--------------------------GTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred cc--------------------------cceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 11 236799999999999999999999999887755
No 268
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=9.1e-17 Score=172.01 Aligned_cols=242 Identities=16% Similarity=0.101 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCCceEEEECCCCccchHHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~~ 197 (609)
...+..++.+.+++++|.+.....+++++||..++.+++.+++. .+ +|+ .|+++...|.+...+
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~-------------~~~~gd--~VI~p~~th~S~~kA 167 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRH-------------KRPKAK--YVIWPRIDQKSCIKA 167 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCC-------------cCCCCC--EEEEECcChHHHHHH
Confidence 46778889999999999974334677744443466666555431 01 466 799999999999999
Q ss_pred HHHcCceEEEEec--C-CCCCCCHHHHHHHHhhhccCCCceEEEEeccc-CccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 198 WRQSLAEVVEIGL--D-DDGLLDIEALRSKLELYKDAKRPILGSFSACS-NVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 198 ~~~~G~~vv~v~~--~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~s-n~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
+...|++++.|+. + +++.+|+++|+++|+.. .++..++++..++ +.+|...|+++|+++|++||+++|+|+|++
T Consensus 168 i~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~--~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg 245 (444)
T TIGR03531 168 ISTAGFEPRVIETVLDGDELTTDVEDIERAIEEI--GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYG 245 (444)
T ss_pred HHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhc--cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCc
Confidence 9999999999995 3 46789999999999831 0145555555443 455688999999999999999999999998
Q ss_pred CCcccc-cC--CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 GPYVEI-DV--RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~~~~~i-d~--~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
.+.... .+ .......+|++++|+||++..|.+.|+++++++-. ++.+...+.+
T Consensus 246 ~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el-~~~i~~~y~g----------------------- 301 (444)
T TIGR03531 246 LQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENF-IQEISKSYPG----------------------- 301 (444)
T ss_pred CcChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHH-HHHHHHhccC-----------------------
Confidence 754321 11 11111246999999999999888767777754431 2232211111
Q ss_pred cccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCC
Q 038499 351 RESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ---NIKILGN 406 (609)
Q Consensus 351 r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~ 406 (609)
+. .+++ .. .+.+.+......|++.+.++..++++++.+.|.++. |-+++..
T Consensus 302 ~~-~~s~--~~--~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~ 355 (444)
T TIGR03531 302 RA-SASP--SL--DVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDT 355 (444)
T ss_pred CC-CChH--HH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC
Confidence 00 1112 11 122222222345677888888889999998887652 4566644
No 269
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.77 E-value=1.3e-16 Score=152.79 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
.++...+.+++++|.+ .+=+| +|+-.+=..++.+++ ++|| .|++....|++...++...
T Consensus 62 pI~~F~~dlaeFlg~D---~~R~t-~GARe~KfavMhal~---------------~~gd--~vV~D~~aHYttyvAAEra 120 (382)
T COG1103 62 PIKDFLEDLAEFLGMD---EVRVT-AGAREAKFAVMHALC---------------KEGD--WVVVDSLAHYTTYVAAERA 120 (382)
T ss_pred cHHHHHHHHHHHhCCc---eeeec-ccchhhHHHHHHHhc---------------cCCC--EEEEcCcchHHHHHHHHhc
Confidence 4566677799999995 56787 899998888888886 7888 7999999999999999999
Q ss_pred CceEEEEecCC--CCCCCHHHHHHHHhhhccC--CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 202 LAEVVEIGLDD--DGLLDIEALRSKLELYKDA--KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 202 G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~--~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
|.+|..||... +..++++...+.|.+.... ..+.+.+++|+....|.+.|.+.++++|+++|+++++.+|++.|-.
T Consensus 121 gl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm 200 (382)
T COG1103 121 GLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM 200 (382)
T ss_pred CCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc
Confidence 99999999653 6789999998888754322 3478999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
+++.++. ++||++.|+||.+..-+.+|+|-++.+.
T Consensus 201 pvs~ke~---g~DFiVgSGHKsmAAs~PiGvl~~~eE~ 235 (382)
T COG1103 201 PVSGKEI---GADFIVGSGHKSMAASAPIGVLAMSEEW 235 (382)
T ss_pred ccccccc---CCCEEEecCccchhccCCeeEEeehhHH
Confidence 9999887 9999999999999877779999999887
No 270
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=6.7e-16 Score=166.04 Aligned_cols=335 Identities=17% Similarity=0.156 Sum_probs=193.2
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
++.++.+..|+ .|+|..++ |+..+.+.+++.+.+.... +.. . ........++.++++++.|.
T Consensus 29 ~G~~~~d~dg~---~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~---~~~-~---~~~~~~~~~la~~l~~~~~~-- 96 (396)
T PRK02627 29 EGARLWDDDGK---EYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI---HTS-N---LYYIEPQEELAEKLVELSGM-- 96 (396)
T ss_pred eeCEEEeCCCC---EEEECCccHHhccCCCCCHHHHHHHHHHHhhcc---ccc-c---ccCCHHHHHHHHHHHhhcCC--
Confidence 34445555554 37887653 4556789999988775431 111 0 01245677788888888765
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC-----ceEEEECCCCccchHHH-HHHcCceEEE---Ee
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE-----RWVVFVGPHEHHSNLLS-WRQSLAEVVE---IG 209 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd-----~~~Vlv~~~~h~s~~~~-~~~~G~~vv~---v~ 209 (609)
++++|+. |.++++..+++++. ..++ ++.|++....||..... ....+..... .+
T Consensus 97 -~~v~~~~-gg~eA~~~al~~a~---------------~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 97 -DKVFFCN-SGAEANEAAIKLAR---------------KYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred -CEEEECC-CcHHHHHHHHHHHH---------------HHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 3899985 44556766666431 1111 12466666555554333 3222222111 11
Q ss_pred cCCCC----CCCHHHHHHHHhhhccCCCceEEEEecccCcccc-ccC---HHHHHHHHHHhCCeEEEeccccC-Cccc--
Q 038499 210 LDDDG----LLDIEALRSKLELYKDAKRPILGSFSACSNVTGI-YSD---TRSIARLLHQYGGFACFDFAASG-PYVE-- 278 (609)
Q Consensus 210 ~~~~g----~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~-~~d---l~~I~~la~~~g~~vivD~A~~~-~~~~-- 278 (609)
...+. ..|+++|++++. +++++++++.++|++|. ..| +++|.++|++||+++|+|++++. +...
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~-----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~ 234 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAIT-----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL 234 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcC-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce
Confidence 11110 128999999996 68999999999999995 433 78999999999999999999773 2211
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
....... ...|+++ ++|.+++...+|++++++++ ++.+.+.... ...+.+.
T Consensus 235 ~~~~~~~-~~pdi~t--~sK~~~~G~rig~~~~~~~~--~~~~~~~~~~------------------------~t~~~~~ 285 (396)
T PRK02627 235 FAYQHYG-IEPDIMT--LAKGLGGGVPIGAVLAKEKV--ADVFTPGDHG------------------------STFGGNP 285 (396)
T ss_pred eeehhcC-CCCCEEE--EcchhhCCcccEEEEEcHHH--HhccCCCCCC------------------------CCCCCCH
Confidence 1111110 1346654 56999855568999999887 3443221000 0112222
Q ss_pred HHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 359 VIQ-MIRAALAFWVKEYIGHEVIKKQEETYIERALERLL----PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 359 i~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
+.+ .+.+++... +. +.+.++.+++.+++.+.|. ..+.+.... ....++++.+ +
T Consensus 286 ~~~~aa~~~l~~~--~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~-~------------ 343 (396)
T PRK02627 286 LACAAALAVIEII--EE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVR----GLGLMIGIEL-D------------ 343 (396)
T ss_pred HHHHHHHHHHHHH--hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeec----cCcEEEEEEe-c------------
Confidence 222 223333322 11 2233444444444444443 333222111 1223344433 3
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
.+...+++.|.++ ||.++++. ++++|+++++..+++++++
T Consensus 344 ------~~~~~~~~~l~~~-Gv~v~~~~---------------------------------~~~lRi~~~~~~~~~~i~~ 383 (396)
T PRK02627 344 ------RPAAEIVKKALEK-GLLINVTG---------------------------------DNVLRLLPPLIISKEEIDE 383 (396)
T ss_pred ------CcHHHHHHHHHHC-CeEEeecC---------------------------------CCEEEEECCcccCHHHHHH
Confidence 1456788888775 99988431 3679999988899999999
Q ss_pred HHHHHHHHHHh
Q 038499 514 TLEALEFIAIY 524 (609)
Q Consensus 514 ll~al~~v~~~ 524 (609)
++++|+++++.
T Consensus 384 ~~~~l~~~l~~ 394 (396)
T PRK02627 384 AVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 271
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.8e-15 Score=161.56 Aligned_cols=329 Identities=16% Similarity=0.219 Sum_probs=189.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+++.++.+..|+ .|+|..++ |-.++.|.+++.+.+..... ... . ...+...++.+.+.+..+.
T Consensus 18 ~~G~~~~d~~G~---~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~----~--~~~~~~~~la~~l~~~~~~- 86 (377)
T PRK02936 18 GKGTKVTDNNGK---TYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-VSN----L--FTNSLQEEVASLLAENSAG- 86 (377)
T ss_pred eecCEEEeCCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-ccc----c--cCCHHHHHHHHHHHhcCCC-
Confidence 445556556664 37886544 56778899999998865321 111 0 1134455555666555443
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc------------eE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA------------EV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~v 205 (609)
+.++|+++|+.+....+..+.. -+|++.+|......|.+....+...+. .+
T Consensus 87 --~~~~~~~sG~~a~~~A~~~a~~---------------~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 87 --DLVFFCNSGAEANEAALKLARK---------------HTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred --CEEEEeCCcHHHHHHHHHHHHH---------------hcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 3688887888864443322221 134332455555555555544443332 12
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccc--c
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYV--E 278 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~--~ 278 (609)
..++.+ |+++|++.+. +++++++++.+++++|...+ +++|.++|++||+++|+|+++.. +.. .
T Consensus 150 ~~~~~~-----d~~~l~~~~~-----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~ 219 (377)
T PRK02936 150 THVPFN-----DIKALKEVMN-----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL 219 (377)
T ss_pred eEeCCC-----CHHHHHHhcc-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence 222222 7899999887 57899999999999888743 88999999999999999999753 221 1
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+.+.... -..|++ +++|.+++...+|+++.++++ .+.+.+... ....+.+.
T Consensus 220 ~~~~~~~-~~~di~--t~sK~l~~G~~ig~v~~~~~~--~~~~~~~~~------------------------~~t~~~~~ 270 (377)
T PRK02936 220 FAYEQFG-LDPDIV--TVAKGLGNGIPVGAMIGKKEL--GTAFGPGSH------------------------GSTFGGNP 270 (377)
T ss_pred hHHHhhC-CCCcEE--EEcccccCCCccEEEEEcHHH--HhhccCCCC------------------------CCCCCCCH
Confidence 1111110 134655 467999843347999998887 333321100 00112222
Q ss_pred HH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 359 VI-QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 359 i~-~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
+. ..+.+++.... . +...++.++..+++.+.|.+ ++.+..+.+ ...++++.+..
T Consensus 271 ~~~aaa~a~l~~~~-~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~----~g~~~~i~~~~------------ 329 (377)
T PRK02936 271 LAMAAAKEVLQVIK-Q----PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG----KGLMIGIECTE------------ 329 (377)
T ss_pred HHHHHHHHHHHHHH-h----ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee----cceEEEEEecc------------
Confidence 22 22334443321 1 22334444445555554443 443322211 22344444332
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
....+.+.|.+ .||.+.++ ..+++|++++...+++++++
T Consensus 330 -------~~~~~~~~l~~-~gv~v~~~---------------------------------g~~~lRi~p~~~~~~~~i~~ 368 (377)
T PRK02936 330 -------EVAPVIEQLRE-EGLLVLSA---------------------------------GPNVIRLLPPLVVTKEELDQ 368 (377)
T ss_pred -------hHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEECCcccCHHHHHH
Confidence 25677777755 69988632 13789999998999999999
Q ss_pred HHHHHHHH
Q 038499 514 TLEALEFI 521 (609)
Q Consensus 514 ll~al~~v 521 (609)
++++|+++
T Consensus 369 ~i~~l~~~ 376 (377)
T PRK02936 369 AVYLLKKV 376 (377)
T ss_pred HHHHHHHh
Confidence 99999875
No 272
>PRK08637 hypothetical protein; Provisional
Probab=99.75 E-value=2.9e-16 Score=168.38 Aligned_cols=303 Identities=14% Similarity=0.088 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHhC-----CCCC--CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 123 VHEASNYIKKCLG-----GGQE--DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 123 ~~e~r~~ia~~~g-----~~~~--~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
..++|+.+++++. ..++ ++|++| +|+++++..++.++ .++|| .|++..+.|+.+.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it-~G~~~al~~~~~~l---------------~~~gd--~Vlv~~P~y~~~~ 107 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVT-NALTHGLSLVADLF---------------VDQGD--TVLLPDHNWGNYK 107 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEc-cchHHHHHHHHHHh---------------cCCCC--EEEEcCCCCccHH
Confidence 4455666665542 2222 367887 89999999988877 37888 6999999998887
Q ss_pred HHHH-HcCceEEEEecC-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHH-----hCCe
Q 038499 196 LSWR-QSLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQ-----YGGF 265 (609)
Q Consensus 196 ~~~~-~~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~-----~g~~ 265 (609)
..+. ..|++++.+++. +++.+|+++|+++++.. ..+..+++++++|+||||.+.+. ++|+++|++ |+++
T Consensus 108 ~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~-~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~ 186 (388)
T PRK08637 108 LTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAA-YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVV 186 (388)
T ss_pred HHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhh-ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 7654 579999999984 45568999999988621 01345678899999999999885 456676664 8999
Q ss_pred EEEeccccCCc----ccccC-CCC-CC-CCccE-EEEcCCCCCCCCC-CcEEEEEec------hhhccCCCCCCccCCCc
Q 038499 266 ACFDFAASGPY----VEIDV-RSG-QT-DGYDA-IFLSTHKFLGGPG-SPGILLMTK------ALYQLGSFPPSTCGGGT 330 (609)
Q Consensus 266 vivD~A~~~~~----~~id~-~~~-~~-~~~D~-v~~S~hK~lggp~-g~G~L~~~~------~~~~l~~~~p~~~ggg~ 330 (609)
+|+|+++..-. ...++ ... .. +.+.+ .+.|++|.++.|+ .+|++++.. ++ ++.+......
T Consensus 187 iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l--~~~~~~~~~~--- 261 (388)
T PRK08637 187 AVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTV--KEALEKKVKG--- 261 (388)
T ss_pred EEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHH--HHHHHHHHHH---
Confidence 99999965211 11111 111 00 12212 2348999877664 499999753 33 1111000000
Q ss_pred eEeeccccccccccccccccccc-CCChhHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhCCC---CceEE
Q 038499 331 VNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGH---EVIKKQEETYIERALERLLPN---QNIKI 403 (609)
Q Consensus 331 v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~---~~i~~~~~~l~~~~~~~L~~~---p~i~v 403 (609)
..+.. .+.+.+.+.+ +..+ +.+.... .......++..+.+.+.|... +++.+
T Consensus 262 ------------------~~~~~~~~~s~~~q~a--~~~~-l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~ 320 (388)
T PRK08637 262 ------------------LIRSNISNGPHPSQSA--VLRA-LNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQA 320 (388)
T ss_pred ------------------HhhcccCCCCcHHHHH--HHHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Confidence 00000 1223333322 1122 2111111 122223334444455556443 24555
Q ss_pred eCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHH
Q 038499 404 LGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIR 483 (609)
Q Consensus 404 ~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~ 483 (609)
..+ ..+++.|...+ + .+..++++.|.++.||.+...
T Consensus 321 ~~~----~~g~~~~~~l~-~----------------~~~~~l~~~l~~~~gv~~~~~----------------------- 356 (388)
T PRK08637 321 YPF----NSGYFMCLKLK-G----------------VDAEELRVHLLEKYGIGTIAL----------------------- 356 (388)
T ss_pred ccc----cceEEEEecCC-h----------------HHHHHHHHHHhhhcceEEEec-----------------------
Confidence 443 34555554433 1 245678888866679977621
Q ss_pred HHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 484 SAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 484 ~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++. .++++++..++.|.+++...
T Consensus 357 ----------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 357 ----------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ----------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 14789999975 67899999999998887643
No 273
>PLN02397 aspartate transaminase
Probab=99.75 E-value=2.3e-16 Score=170.84 Aligned_cols=252 Identities=15% Similarity=0.117 Sum_probs=164.0
Q ss_pred cCCCceEEEECCCCccchHHHHHHcCceEEEEec-CC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH--
Q 038499 177 RDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL-DD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT-- 252 (609)
Q Consensus 177 ~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl-- 252 (609)
.||| .|+++.+.|+.+...++..|++++.+++ +. +..+|++.+++.+.+. .++++++++++++||||.+.+.
T Consensus 140 ~pGd--~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~--~~~~~~i~~~~P~NPTG~v~s~e~ 215 (423)
T PLN02397 140 YPGS--TIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA--PDGSFVLLHACAHNPTGVDPTPEQ 215 (423)
T ss_pred CCCC--EEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHH
Confidence 5888 7999999999999999999999999997 32 4679999999888632 1467899999999999999874
Q ss_pred -HHHHHHHHHhCCeEEEeccccCCcc-c-----ccCCCCCCCC-ccEEEEcCCCCCCCC-CCcEEEE--E-echhhc--c
Q 038499 253 -RSIARLLHQYGGFACFDFAASGPYV-E-----IDVRSGQTDG-YDAIFLSTHKFLGGP-GSPGILL--M-TKALYQ--L 318 (609)
Q Consensus 253 -~~I~~la~~~g~~vivD~A~~~~~~-~-----id~~~~~~~~-~D~v~~S~hK~lggp-~g~G~L~--~-~~~~~~--l 318 (609)
++|+++|++||+++|+|+++..-.- . ..+......+ .-+++.|++|.++-| ..+|+++ + ++++.. .
T Consensus 216 l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~ 295 (423)
T PLN02397 216 WEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVK 295 (423)
T ss_pred HHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHH
Confidence 5678889999999999999653211 0 0111110011 236677999999833 3599986 3 333210 0
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHH
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY-------IGHEVIKKQEETYIERA 391 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~-------~g~~~i~~~~~~l~~~~ 391 (609)
..+... ......+++...+.+. ..+ +.+. ...+.++++.++.++.+
T Consensus 296 ~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~-L~~~~~~~~~~~~~~~~~~~~~~rr~~l 348 (423)
T PLN02397 296 SQLKLI------------------------ARPMYSNPPIHGASIV--ATI-LGDPELFSEWTKELKGMADRIISMRQKL 348 (423)
T ss_pred HHHHHH------------------------HhcccCCCcHHHHHHH--HHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011000 0001122333333221 111 1110 11456677888888999
Q ss_pred HHHhCCCCc----eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 392 LERLLPNQN----IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 392 ~~~L~~~p~----i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
.+.|+++ + +.+..+ ..+++.|.-. + .++++.|.+++||.+.+
T Consensus 349 ~~~L~~~-~~~~~~~~~~p----~gg~fl~~~l--------------------~-~~~~~~Ll~~~~V~v~~-------- 394 (423)
T PLN02397 349 YDALEAR-GSPGDWSHITK----QIGMFSFTGL--------------------N-KEQVDRMTKEYHIYMTR-------- 394 (423)
T ss_pred HHHHHhc-CCCCCCCcccC----CceEEEecCC--------------------C-HHHHHHHHHhCCEEECC--------
Confidence 9999876 4 444333 3455555432 2 34777787888998851
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.+ |+++.. .+.+.+++++++|+.+++
T Consensus 395 ---------------------------~~--Ri~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 395 ---------------------------DG--RISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ---------------------------CC--eEEEee-CCHHHHHHHHHHHHHHHh
Confidence 24 999842 688999999999999975
No 274
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=2.4e-15 Score=160.53 Aligned_cols=334 Identities=13% Similarity=0.141 Sum_probs=192.8
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+++.++....|++ |+|..+. |. .+.|.+++.+.+.....++.. ...++++.+++.+...
T Consensus 18 ~~G~~l~d~dg~~---~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~~~la~~l~~~ 82 (375)
T PRK04260 18 AEGNYLIDTDGKK---YLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNL-----------YLNSLQEEVAQKLIGD 82 (375)
T ss_pred eeeCEEEeCCCCE---EEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCc-----------cCCHHHHHHHHHHhcC
Confidence 4556666666753 7777543 56 567999998888654322211 1334566677655444
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEE-CCCCccchHHHHHHcCceE---------EE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFV-GPHEHHSNLLSWRQSLAEV---------VE 207 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~~v---------v~ 207 (609)
+++.++|++||+.+....+..+.. ...++ .|++ ....|.+....+...+.+. ..
T Consensus 83 ~~~~~~~~~SGseA~~~Al~~ar~--------------~~~~~--~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~ 146 (375)
T PRK04260 83 KDYLAFFCNSGAEANEAAIKIARK--------------ATGKQ--EIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPH 146 (375)
T ss_pred cCCEEEEcCccHHHHHHHHHHHHH--------------hcCCC--eEEEECCCcCcccHHHHhccCCcccCCCCCCCCCC
Confidence 433468887777764433322221 12223 3555 4555555555544333221 11
Q ss_pred EecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC-ccc--cc
Q 038499 208 IGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YVE--ID 280 (609)
Q Consensus 208 v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~-~~~--id 280 (609)
++.. -..|++++++++. +++.+++++.++|++|.+.+ +++|.++|+++|+++++|+++..- ... ..
T Consensus 147 ~~~~--~~~dl~~l~~~l~-----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~ 219 (375)
T PRK04260 147 FSYA--IFNDLNSVKALVN-----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA 219 (375)
T ss_pred eEEe--CCCCHHHHHHhcC-----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence 1110 0238999999886 56889999999999999866 799999999999999999997531 111 11
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI 360 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~ 360 (609)
.... ....|++ +++|.+++...+|++++++++ .+.+...... ....+++...
T Consensus 220 ~~~~-~~~pdi~--t~sK~l~~G~~ig~~~~~~~~--~~~~~~~~~~-----------------------~t~~~~~~~~ 271 (375)
T PRK04260 220 FEHY-GIEPDIF--TLAKGLANGVPVGAMLAKSSL--GGAFGYGSHG-----------------------STFGGNKLSM 271 (375)
T ss_pred hHhh-CCCCCEE--EecccccCCcceEEEEEcHHH--HhhcCCCCCC-----------------------CCCCcCHHHH
Confidence 0011 0135755 677999844458999999887 3333211000 0011223222
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 361 QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
..+.+.+.... ...-.+++++..+.+++.+.+.+...+.+..+.. ...++++.. . .
T Consensus 272 ~aa~a~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~-~------------------~ 327 (375)
T PRK04260 272 AAASATLDIML-TAGFLEQALENGNYLQEQLQKALQDKETVTTVRG----LGYMIGIET-T------------------A 327 (375)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec----cceEEEEEe-c------------------C
Confidence 22233333321 1112344455555555555555555543322211 223333333 3 1
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
+...+.+.|.+ .||.+.++ .++.+|++++..++++|+++++++|+.
T Consensus 328 ~~~~~~~~l~~-~Gi~v~~~---------------------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 328 DLSQLVEAARD-KGLIVLTA---------------------------------GTNVIRLLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred cHHHHHHHHHh-CCCEEecC---------------------------------CCCEEEEcCCCccCHHHHHHHHHHHHH
Confidence 35678888866 59988632 136799999999999999999999987
Q ss_pred H
Q 038499 521 I 521 (609)
Q Consensus 521 v 521 (609)
+
T Consensus 374 ~ 374 (375)
T PRK04260 374 V 374 (375)
T ss_pred h
Confidence 5
No 275
>PLN02368 alanine transaminase
Probab=99.74 E-value=2.3e-16 Score=169.25 Aligned_cols=247 Identities=13% Similarity=0.025 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH
Q 038499 120 TNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (609)
..+++.+.+++.+..| .+++ +|++| +|++.++..++.++. .++|| .|+++.+.|+.+...
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga~~al~~~~~~l~--------------~~pGd--~Vli~~P~Y~~y~~~ 171 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPE-LIFLT-DGASKGVMQILNAVI--------------RGEKD--GVLVPVPQYPLYSAT 171 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChh-hEEEc-ccHHHHHHHHHHHHc--------------CCCCC--EEEEeCCCCccHHHH
Confidence 3444444444444446 3454 89998 899989988877662 15888 699999999999999
Q ss_pred HHHcCceEEEEecCC--CCCCCHHHHHHHHhhhcc-CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEecc
Q 038499 198 WRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKD-AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A 271 (609)
++..|++++.++++. ++.+|+++|+++++.... ..+++++++++|+||||.+.+. ++|+++|++||+++|+|++
T Consensus 172 ~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~ 251 (407)
T PLN02368 172 ISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV 251 (407)
T ss_pred HHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 999999999999875 367999999999973211 1268999999999999999885 5678889999999999999
Q ss_pred ccCCc-----ccccCC----CCC----CCCccEEEEcCCCCC-CCC-CCcEEEEE---echhhccCCCCCCccCCCceEe
Q 038499 272 ASGPY-----VEIDVR----SGQ----TDGYDAIFLSTHKFL-GGP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 272 ~~~~~-----~~id~~----~~~----~~~~D~v~~S~hK~l-ggp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
+..-. ....+. .+. ....-+++.|++|.+ |-| ..+|++++ ++++ ++.+...
T Consensus 252 Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l--i~~~~~~--------- 320 (407)
T PLN02368 252 YQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT--VEEIYKV--------- 320 (407)
T ss_pred ccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH--HHHHHHH---------
Confidence 65311 111110 010 011346677999998 433 34899995 6666 2222111
Q ss_pred ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY-----------IGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~-----------~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
. ....+.+.+.+.+ +.+++ ... ...+.+.+..++.++.+.+.|+++||+.
T Consensus 321 ---------------~-~~~~~~~~~~Q~a--a~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 321 ---------------A-SIALSPNVSGQIF--MGLMV-NPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred ---------------h-cccCCCCcHHHHH--HHHHh-CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 0 0011222233322 22222 110 0113456677888899999999999988
Q ss_pred EeCCCCCCCcceEEEE
Q 038499 403 ILGNTSTKRQAILSFN 418 (609)
Q Consensus 403 v~~~~~~~r~~~~~f~ 418 (609)
+..+ ..+++.|.
T Consensus 382 ~~~P----~Gafy~~~ 393 (407)
T PLN02368 382 CNFT----EGAMYSFP 393 (407)
T ss_pred eCCC----CeeeEecc
Confidence 7654 34555554
No 276
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=4.5e-15 Score=152.77 Aligned_cols=342 Identities=18% Similarity=0.224 Sum_probs=219.7
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+.-|++ |+|..+. |-+.+.+.+++.++....+.-.+. + .++...++.+.+.+..+ .
T Consensus 31 G~G~~v~D~~G~~---YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~---~----~~~~~~~la~~L~~~s~-~ 99 (404)
T COG4992 31 GEGAYVWDQQGRE---YLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNL---F----YNEPQAELAEKLVELSP-F 99 (404)
T ss_pred ccccEEECCCCCE---eeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccc---c----CChHHHHHHHHHHhhCc-c
Confidence 6677777777764 9997654 556889999999988766432222 1 23456677778888887 3
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCCceEEEECCCCccchHHH-----HHH---cC-----c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEERWVVFVGPHEHHSNLLS-----WRQ---SL-----A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~~-----~~~---~G-----~ 203 (609)
. +.|+||+||+.+ +...+..-- .+. ..++..|+.-...+|.-... ++. .+ -
T Consensus 100 ~-d~vff~NSGaEA-~EaAiKlAR-------------k~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~ 164 (404)
T COG4992 100 A-DRVFFCNSGAEA-NEAALKLAR-------------KYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLP 164 (404)
T ss_pred c-cEEEEcCCcHHH-HHHHHHHHH-------------HHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCC
Confidence 3 489999888875 444333211 011 12233677766666653211 111 11 1
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.++.+|.+ |+++++++|+ ++|..|++..++-..|++.+ ++++-++|++||+++|+|+.|.+-...-
T Consensus 165 g~~~vpfn-----Di~al~~ai~-----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG 234 (404)
T COG4992 165 GFRHVPFN-----DIEALEAAID-----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG 234 (404)
T ss_pred CceecCCC-----CHHHHHHHhc-----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence 35566665 8999999999 68999999999999999977 6779999999999999999987532211
Q ss_pred cCCCCC--CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 280 DVRSGQ--TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 280 d~~~~~--~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
.+-... .-..|+++.. |.+||...+|.+++++.. ...+.|-..|... .|.|
T Consensus 235 k~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~~~--~~~~~~G~HgSTf-----------------------GGNp 287 (404)
T COG4992 235 KLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATEEI--ASAFTPGDHGSTF-----------------------GGNP 287 (404)
T ss_pred hHHHHHHhCCCCCEEEee--ccccCCccceeeEEchhh--hhcCCCCcccCCC-----------------------CcCH
Confidence 111000 0134887766 999988779999998654 2344444333211 3444
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc-eEEeCCCCCCCcceEE-EEeccCCCCCcCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN-IKILGNTSTKRQAILS-FNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~-i~v~~~~~~~r~~~~~-f~~~~~~~~~~~~~~~~~~ 435 (609)
-..+...++++.. ..+.+.++.++..++++++|.++.. +.++... ...+.+. ..+.. +
T Consensus 288 LacAv~~a~l~~l-----~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~v--RG~GLmiGiel~~-~------------ 347 (404)
T COG4992 288 LACAVALAVLEVL-----LEEGLLENVREKGEYLLQRLRELKRRYPLVKEV--RGRGLMIGIELKE-P------------ 347 (404)
T ss_pred HHHHHHHHHHHHH-----cchhHHHHHHHHHHHHHHHHHHHhhcCCceeee--ecceeEEEEEecC-c------------
Confidence 4444444455443 3456667777788888888776411 1122211 1123332 33332 1
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
....++++.|.+ .|+.+.. + .+..+|+..+.-.|++|++.++
T Consensus 348 ----~~a~~~~~~~~~-~gvL~~~----a-----------------------------~~~ViR~~PpL~i~~eei~~~~ 389 (404)
T COG4992 348 ----YRARDIVRALRE-EGVLVLP----A-----------------------------GPNVIRFLPPLVITEEEIDEAL 389 (404)
T ss_pred ----ccHHHHHHHHHH-CCeEEec----C-----------------------------CCCeEEecCCccCCHHHHHHHH
Confidence 136788888877 4988762 2 1478999999999999999999
Q ss_pred HHHHHHHHhcc
Q 038499 516 EALEFIAIYGQ 526 (609)
Q Consensus 516 ~al~~v~~~~~ 526 (609)
++++.+++...
T Consensus 390 ~~l~~~l~~~~ 400 (404)
T COG4992 390 DALERALAAAS 400 (404)
T ss_pred HHHHHHHHHhh
Confidence 99999987643
No 277
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.73 E-value=1.5e-16 Score=167.09 Aligned_cols=347 Identities=19% Similarity=0.189 Sum_probs=190.0
Q ss_pred CCChHHHHHHHHHhhcCCccC--CCCCCchhhHHH-HHHHHHHHHHHHHHhCCCCCC--cEEEeCChHHHHHHHHHHHhc
Q 038499 87 GRSLRYIENYIINNVLPFYGN--THTCDSYVGQHT-TNMVHEASNYIKKCLGGGQED--AMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~-~~~~~e~r~~ia~~~g~~~~~--~vift~sGttaal~~l~~~l~ 161 (609)
....+.|.+++...+...|+. |+.. ++.|... .++..-+++.+++++|++++. .-+=..||+.+++..+ .+|
T Consensus 30 N~~Sp~v~~al~S~l~nkyaeg~pg~r-yy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~-~aL- 106 (399)
T PF00464_consen 30 NYMSPAVREALGSDLTNKYAEGYPGKR-YYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVY-MAL- 106 (399)
T ss_dssp ----HHHHHHHTSGGGGS-TTEETTEE-SSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHH-HHH-
T ss_pred cccCHHHHHHhCCcceeeccccCCCcc-cccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHH-HHH-
Confidence 345567777776666655543 3222 3344443 455666888999999998542 1223347888655444 333
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchH---HH--H-----HHcCceEEEEecC-CCCCCCHHHHHHHHhhhcc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL---LS--W-----RQSLAEVVEIGLD-DDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~---~~--~-----~~~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~ 230 (609)
++||| .|+.-+..|.+.. .. . .....+++.++++ +++.+|.+++++.+.+
T Consensus 107 --------------l~pGD--~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~--- 167 (399)
T PF00464_consen 107 --------------LKPGD--TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE--- 167 (399)
T ss_dssp --------------T-TT---EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH---
T ss_pred --------------HhhcC--cEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh---
Confidence 48999 4776665554332 11 1 2234678888998 4789999999999987
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.+|++|++...+.+ ...|++++.++|++.|+++++|.+|.+|.+.-.+.+-....+|++++|.||.|.||.| |+++
T Consensus 168 -~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg-giI~ 243 (399)
T PF00464_consen 168 -HKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG-GIIL 243 (399)
T ss_dssp -H--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS--EEEE
T ss_pred -cCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc-eEEE
Confidence 58999888765433 6689999999999999999999998765544333332234689999999999999997 9999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccC---CChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG---GTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~---gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
.++....++.. + ...+..+.+.+...... |.|....+...++++........+...++..++
T Consensus 244 ~~~~~~~~~~~-----~----------~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~N 308 (399)
T PF00464_consen 244 TNKGSKNVDKK-----G----------KEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKN 308 (399)
T ss_dssp ES-SEEEE-TT-----S-----------EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred EcCCccccCCc-----c----------cccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 98443101100 0 00011222222222222 234343333333333321122346778888889
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++.+.+.|.+. |++|+... .....+...+.. . .+++..+.+.| ++.||.+..- .-|+
T Consensus 309 Ak~La~~L~~~-G~~v~~gg--Td~H~vlvd~~~-~---------------~~~g~~a~~~L-e~~gI~vnkn---~iP~ 365 (399)
T PF00464_consen 309 AKALAEALQER-GFKVVTGG--TDNHQVLVDLRS-F---------------GIDGKEAEKAL-EEAGIIVNKN---TIPG 365 (399)
T ss_dssp HHHHHHHHHHT-T-EEGGGS---SSSEEEEEGGG-G---------------TS-HHHHHHHH-HHTTEE-EEE-----TT
T ss_pred HHHHHHHHhhC-CcEEEECC--CCCCeEEEEecc-c---------------ccchHHHHHHH-HhcCeeeccc---ccCC
Confidence 99999999886 99998642 223333444433 1 15677777777 5679988731 1121
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHH
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP----YYMSNEEFEFTLEAL 518 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~----~~~t~eeid~ll~al 518 (609)
-.. ...+..+||... ..+.++|++.+.+.|
T Consensus 366 d~~---------------------~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 366 DRS---------------------PFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp TST---------------------TTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCC---------------------CCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 110 012578999964 345678887776654
No 278
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.73 E-value=7.2e-15 Score=157.97 Aligned_cols=346 Identities=14% Similarity=0.141 Sum_probs=202.6
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..+ -|-..+.|.+++.+++...+.. ... .......++.+.|+++++.
T Consensus 24 ~~G~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~------~~~~~~~~la~~L~~~~~~- 92 (397)
T TIGR03246 24 GEGSRVWDQQGK---EYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI-GNG------YTNEPVLRLAKKLVDATFA- 92 (397)
T ss_pred eecCEEEeCCCC---EEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc-cCc------cCCHHHHHHHHHHHhhCCC-
Confidence 455666666664 3888765 3567889999999888653211 111 1134467888899998865
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc------------eE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA------------EV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~v 205 (609)
+ .+.|+.||+.+....+-.+..... ..-.++...+|......|.+....+...+. .+
T Consensus 93 -~-~~~f~~SGseA~e~Alk~ar~~~~---------~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (397)
T TIGR03246 93 -D-KVFFCNSGAEANEAALKLARRYAL---------DKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGI 161 (397)
T ss_pred -C-EEEEeCCcHHHHHHHHHHHHHHHH---------hcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCce
Confidence 2 788888999874443322211000 000123222444454555554444443332 22
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC-cccc-
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YVEI- 279 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~-~~~i- 279 (609)
..++.+ |++++++++. +++++|+++.++++.|.+.+ +++|.++|++||+++|+|+++.+- ....
T Consensus 162 ~~~~~~-----d~~~l~~~l~-----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~ 231 (397)
T TIGR03246 162 KHAPYN-----DLAAAKALIS-----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGEL 231 (397)
T ss_pred EEeCCC-----CHHHHHHHhc-----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccc
Confidence 333332 8999999997 57899999988888887643 889999999999999999997422 1111
Q ss_pred -cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 280 -DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 280 -d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
...... -.+|+++ +.|.+||...+|++++++++ .+.+.....+ .+ ..+.|.
T Consensus 232 ~a~~~~g-v~pDi~t--~~K~lggG~pigav~~~~~i--~~~~~~~~~~-~t----------------------~~~~p~ 283 (397)
T TIGR03246 232 YAYMHYG-VTPDILT--SAKALGGGFPIGAMLTTTEI--AAHLKVGTHG-TT----------------------YGGNPL 283 (397)
T ss_pred hhhhhcC-CCCCEEE--eehhhhCCcceeEEEEcHHH--HHhccCCCcC-CC----------------------CCCCHH
Confidence 001110 1357765 56999754558999999888 3333211000 00 023333
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc-eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN-IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
......++++.. + .+.+.++.+++.+++.+.|+++.. ..++... .....++.+.+.+ ..
T Consensus 284 ~~aaa~a~l~~~--~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~-~~------------- 343 (397)
T TIGR03246 284 ACAVAGKVLDLV--N---TPELLAGVKQRHDLFVDGLEKINARYNVFSEI-RGKGLLIGAVLTE-AY------------- 343 (397)
T ss_pred HHHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEee-ecCceEEEEEEcC-ch-------------
Confidence 333333444432 1 234667777788888887765421 1111110 0112233333322 10
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
......+++.|.+ .||.+.+. .++++|+++++.+|++|+++++++
T Consensus 344 -~~~~~~~~~~l~~-~Gv~~~~~---------------------------------g~~~lR~~p~~~~t~~~i~~~~~~ 388 (397)
T TIGR03246 344 -QGKAKQFVNAAAE-EGVIALIA---------------------------------GPNVVRFAPSLVISDDDIDEGLAR 388 (397)
T ss_pred -hhHHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEeCCCCCCHHHHHHHHHH
Confidence 0134577777866 59887621 137899999999999999999999
Q ss_pred HHHHHHh
Q 038499 518 LEFIAIY 524 (609)
Q Consensus 518 l~~v~~~ 524 (609)
|++++..
T Consensus 389 l~~~l~~ 395 (397)
T TIGR03246 389 FERAIEQ 395 (397)
T ss_pred HHHHHHH
Confidence 9988754
No 279
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.72 E-value=2e-15 Score=158.00 Aligned_cols=307 Identities=19% Similarity=0.184 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
+.....+++.++++-|+.. .+.|. ||.. ||..++..+ +++|| .|+++...|.+...-+
T Consensus 62 nPT~~~lE~~~a~LEg~~~--~~afs-SGma-AI~~~~l~l---------------l~~GD--~vl~~~~~YG~t~~~~~ 120 (396)
T COG0626 62 NPTRDALEEALAELEGGED--AFAFS-SGMA-AISTALLAL---------------LKAGD--HVLLPDDLYGGTYRLFE 120 (396)
T ss_pred CccHHHHHHHHHHhhCCCc--EEEec-CcHH-HHHHHHHHh---------------cCCCC--EEEecCCccchHHHHHH
Confidence 3446678888888888763 46664 7777 566654444 58899 6888877777765443
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
+..|+++.+++.. +.+++++++.+ ++|++|++..|+|||-.+.|+++|+++||++|++++||.+.+.|
T Consensus 121 ~~l~~~gi~~~~~d~~-----~~~~~~~~~~~----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP 191 (396)
T COG0626 121 KILQKFGVEVTFVDPG-----DDEALEAAIKE----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP 191 (396)
T ss_pred HHHHhcCeEEEEECCC-----ChHHHHHHhcc----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc
Confidence 4578999988754 56677777763 48999999999999999999999999999999999999998877
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
+..-.+. .|+|+++-|..|+++|-.- .|+++.+++.. ...... ..+..
T Consensus 192 ~~q~PL~----~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~--~~~~~~------------------------~~~~~ 241 (396)
T COG0626 192 VLQRPLE----LGADIVVHSATKYLGGHSDVLGGVVLTPNEEL--YELLFF------------------------AQRAN 241 (396)
T ss_pred cccChhh----cCCCEEEEeccccccCCcceeeeEEecChHHH--HHHHHH------------------------HHHhh
Confidence 5433222 2899999999999998743 46555555541 111000 00100
Q ss_pred CCC-hhHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEE
Q 038499 354 GGT-PQVIQMIRAALAFWVK-EYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSF 417 (609)
Q Consensus 354 ~gt-p~i~~~~~aal~~~~~-~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f 417 (609)
.|+ ..... + |++. ...-.....++..+.+..+.+.|.+.|.++ |+-|.- ....+.+||
T Consensus 242 ~G~~l~p~d---A---~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf 315 (396)
T COG0626 242 TGAVLSPFD---A---WLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSF 315 (396)
T ss_pred cCCCCCHHH---H---HHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEE
Confidence 111 11111 1 1111 111233445666777888889999988885 665531 126678999
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
.+.. +. ....+.+.| +.+.+...-|..-+ .|.......+..+... -.|+.
T Consensus 316 ~l~~-~~----------------~~~~f~~~L-~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~---------~~Gi~ 368 (396)
T COG0626 316 ELKN-EE----------------AAKKFLDSL-KLFKLAESLGGVESLISHPATMTHASIPLEERA---------KAGIT 368 (396)
T ss_pred EeCC-hH----------------HHHHHHHhC-CccEEeccCCCcccccccccccCcccCCHhHHH---------hcCCC
Confidence 9886 11 234455555 45565566554332 1211111122221111 14667
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
++.||+|++.-..++=++.+-++|+
T Consensus 369 ~~LvRlSVGlEd~eDLi~Dl~~Al~ 393 (396)
T COG0626 369 DGLVRLSVGLEDVEDLIADLEQALA 393 (396)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 8999999997544444444444443
No 280
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.72 E-value=1.3e-16 Score=168.20 Aligned_cols=286 Identities=20% Similarity=0.217 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.+|+.+|++. -.|.-+|||.++..++.++ +++|| .|+++...|-|...++..
T Consensus 66 G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~---------------~~~gd--~VLv~RN~HkSv~~alil 125 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL---------------CRPGD--KVLVDRNCHKSVYNALIL 125 (417)
T ss_dssp THHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH---------------TTTTC--EEEEETT--HHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh---------------cCCCC--EEEEcCCcHHHHHHHHHH
Confidence 458899999999999973 4555599999999988877 48999 699999999999999999
Q ss_pred cCceEEEEecCCC-----CCCCH-----HHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 201 SLAEVVEIGLDDD-----GLLDI-----EALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 201 ~G~~vv~v~~~~~-----g~ld~-----e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
.|+++++++...+ +.+++ +.++++|+++.....++++++++| |..|++.|+++|+++||++|+.++||+
T Consensus 126 ~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDE 204 (417)
T PF01276_consen 126 SGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDE 204 (417)
T ss_dssp HTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-
T ss_pred cCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEc
Confidence 9999999976421 24566 999999987522212456888876 466999999999999999999999999
Q ss_pred cccCCc--ccccCCCCCCCCcc-------EEEEcCCCCCCCCCCcEEEEEechh-hccCCCCCCccCCCceEeecccccc
Q 038499 271 AASGPY--VEIDVRSGQTDGYD-------AIFLSTHKFLGGPGSPGILLMTKAL-YQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 271 A~~~~~--~~id~~~~~~~~~D-------~v~~S~hK~lggp~g~G~L~~~~~~-~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
||++-. .++.-... ..++| +++.|.||.+++....++|.++.+. +..+++
T Consensus 205 AhGah~~F~~lp~~a~-~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~------------------- 264 (417)
T PF01276_consen 205 AHGAHFGFHPLPRSAL-ALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERV------------------- 264 (417)
T ss_dssp TT-TTGGCSGGGTTCS-STTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHH-------------------
T ss_pred cccccccCCCCccchh-hccCccccccceeeeechhhcccccccceEEEecCCCcccHHHH-------------------
Confidence 987521 12211111 23778 9999999999988888999999875 210111
Q ss_pred cccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh---CCCCceEEeCCCCCCCcceE
Q 038499 341 DTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERL---LPNQNIKILGNTSTKRQAIL 415 (609)
Q Consensus 341 ~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L---~~~p~i~v~~~~~~~r~~~~ 415 (609)
...-......+|+.+-+ +-.+..++ ....| +.+.++..++++.+++++ .++++++++++..-...+
T Consensus 265 -----~~~l~~~~TTSPSY~lmASlD~a~~~m-~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~-- 335 (417)
T PF01276_consen 265 -----NEALSMHQTTSPSYPLMASLDVARAQM-EEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEG-- 335 (417)
T ss_dssp -----HHHHHHHS-SS--HHHHHHHHHHHHHH-SHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCC--
T ss_pred -----HHHHHHHcCCChHHHHHHHHHHHHHHH-hhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCcc--
Confidence 00012233445554433 22332222 01223 344455666777777777 788999999875311111
Q ss_pred EEEeccCCCCCcC----CCC------------C-----C-CCCCCCCChHHHHHHHhhhcCcEec
Q 038499 416 SFNIHSSTINSSL----GEN------------T-----K-TETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 416 ~f~~~~~~~~~~~----~~~------------~-----~-~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
+|...+ +..+.. .++ + + ..++.++++..+.+.|.++ ||++.
T Consensus 336 ~~~~~~-~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~-~I~~E 398 (417)
T PF01276_consen 336 CWDLDP-GENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREH-GIQVE 398 (417)
T ss_dssp GCB--T-T-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHT-TEE-S
T ss_pred ccccCc-cccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHc-CCEEE
Confidence 111111 111100 000 1 1 1145578899999999775 99987
No 281
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.71 E-value=1.7e-14 Score=155.43 Aligned_cols=346 Identities=17% Similarity=0.180 Sum_probs=207.7
Q ss_pred CccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++...-|+ -|+|..++ |-..+.|.+++.+.+... ..... . .......++.+.+++++|.
T Consensus 28 g~~~~~~~g~---~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~-~~~~~-----~-~~~~~~~~l~~~l~~~~~~--- 94 (401)
T TIGR01885 28 GVHVWDVEGK---RYLDFLSAYSAVNQGHCHPKIVKALTEQAQKL-TLSSR-----A-FYNDVFGEFAEYVTKLFGY--- 94 (401)
T ss_pred cCEEEeCCCC---EEEEcccCHhhccCCCCCHHHHHHHHHHHHhc-ccccc-----c-cCCHHHHHHHHHHHhhcCC---
Confidence 3444444443 37776543 334788999998887543 11111 0 1245677889999999975
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcC------------ceEE
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSL------------AEVV 206 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G------------~~vv 206 (609)
+.++|++||+.+....+-.+..... + .+.+.+++ ..|+.....||+ ....+...+ ..+.
T Consensus 95 ~~~~~~~SGs~A~e~ai~~a~~~~~----~---~~~~~~~~-~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (401)
T TIGR01885 95 DKVLPMNTGAEAVETAIKLARKWGY----K---VKGIPENQ-AIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFK 166 (401)
T ss_pred CEEEEeCccHHHHHHHHHHHHHHhh----h---hcCCCCCC-CEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCce
Confidence 2688888999874444332221000 0 00012333 367777777664 344444332 1233
Q ss_pred EEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccc--cc
Q 038499 207 EIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYV--EI 279 (609)
Q Consensus 207 ~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~--~i 279 (609)
.++.+ |+++|++++++. .+++.+++++.+.+++|.+.| +++|.++|++||+++++|+++.. +.. .+
T Consensus 167 ~~~~~-----d~~~le~~l~~~--~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~ 239 (401)
T TIGR01885 167 KIPYN-----NLEALEEALEDH--GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL 239 (401)
T ss_pred EeCCC-----CHHHHHHHHHhc--CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh
Confidence 34332 789999988642 246678889999999999987 89999999999999999999753 211 11
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
.+... ....|++++| |.++|. ..+|+++.++++ ++.+.....+ . ...+.|.
T Consensus 240 ~~~~~-~~~~di~~~g--K~l~~g~~~ig~v~~~~~i--~~~~~~~~~~----------------------~-t~~~~p~ 291 (401)
T TIGR01885 240 CVDHE-NVKPDIVLLG--KALSGGVYPVSAVLADDDV--MLTIKPGEHG----------------------S-TYGGNPL 291 (401)
T ss_pred HHhhc-CCCCCEEEee--ccccCCCCCcEEEEEcHHH--HhhccCCCCC----------------------C-CCCCCHH
Confidence 11100 1146888765 999864 348899998887 3333221100 0 0123444
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
....+.+++... +. +.+.++.+++.+++.+.|++++ ..++... .....++.+.+.. +. .
T Consensus 292 ~~~aa~a~L~~i--~~---~~l~~~~~~~~~~~~~~L~~l~-~~~~~~~-~g~g~~~~i~~~~-~~-------------~ 350 (401)
T TIGR01885 292 ACAVAVAALEVL--EE---EKLAENAEKLGEIFRDQLKKLP-KPIITEV-RGRGLLNAIVIDE-SK-------------T 350 (401)
T ss_pred HHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHhcc-CCceeEE-eecCeeEEEEecc-Cc-------------c
Confidence 444444555443 21 2355677788899999998763 2222211 1133444444433 10 0
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
......+++.|.+ .||.+.++ .++.+||++++.+|++|+++++++|
T Consensus 351 ~~~~~~l~~~l~~-~Gv~v~~~---------------------------------~~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 351 GRTAWDLCLKLKE-KGLLAKPT---------------------------------HGNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred hhHHHHHHHHHHh-CCEEEEec---------------------------------CCCEEEEeCCccCCHHHHHHHHHHH
Confidence 1235678888865 59988631 1478999999999999999999999
Q ss_pred HHHH
Q 038499 519 EFIA 522 (609)
Q Consensus 519 ~~v~ 522 (609)
++++
T Consensus 397 ~~~l 400 (401)
T TIGR01885 397 KKVI 400 (401)
T ss_pred HHHh
Confidence 8764
No 282
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=4.9e-16 Score=158.81 Aligned_cols=343 Identities=16% Similarity=0.137 Sum_probs=228.4
Q ss_pred EecCC-CCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCCh-HHHHHHHHH
Q 038499 80 YADHT-ASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSG-TTAAIKRLQ 157 (609)
Q Consensus 80 yld~~-a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sG-ttaal~~l~ 157 (609)
||..+ +.|++.+.+++.+...-+. ..+ +..-.++.....++++.+|+++|.+. .++|. .| +|.+++. -
T Consensus 146 YLGFa~~~g~ca~~~~~~~~kygl~----~cs--s~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~-mGf~TNs~~~-p 215 (519)
T KOG1357|consen 146 YLGFAQSVGPCAEASLKSFDKYGLS----RCS--SRHEAGTTEEHKELEELVARFLGVED--AIVFS-MGFATNSMNI-P 215 (519)
T ss_pred cccccccCCcCChHHHHHHHHhccc----ccc--cchhcccHHHHHHHHHHHHHhcCCcc--eEEEe-ccccccccCc-c
Confidence 44444 3467778888877654432 222 12223467888999999999999984 57775 44 2222211 1
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc--CCC--
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD--AKR-- 233 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~--~~~-- 233 (609)
. .+.+|. .|+.....|.|....+|..|+.++....+ |+++||+.|++... +++
T Consensus 216 ~----------------l~~~gs--LIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Th 272 (519)
T KOG1357|consen 216 S----------------LLGKGS--LIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTH 272 (519)
T ss_pred e----------------eecCCc--ceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcC
Confidence 1 135666 79999999999999999999999999877 77888887765321 122
Q ss_pred -c---eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc---CCC---CCCCCccEEEEcCCCCCCCC
Q 038499 234 -P---ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID---VRS---GQTDGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 234 -~---~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id---~~~---~~~~~~D~v~~S~hK~lggp 303 (609)
+ .+++.....+.-|.+.++.++.+++++|.++++.|+||+.|..... +.+ .+...+|++...+.|.+|+.
T Consensus 273 rp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~ 352 (519)
T KOG1357|consen 273 RPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA 352 (519)
T ss_pred CcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc
Confidence 1 2777788888999999999999999999999999999998766321 111 12236799999999999854
Q ss_pred CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcC---HHHH
Q 038499 304 GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIG---HEVI 380 (609)
Q Consensus 304 ~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g---~~~i 380 (609)
+ |++..++++ ++.++.. . .++-| ...-.|++.+.+..++.... .+.| -++.
T Consensus 353 G--Gyiagsk~l--id~lrt~-s--~~~~y------------------at~~sppvaqq~~ssl~~i~-G~dgt~~g~~k 406 (519)
T KOG1357|consen 353 G--GYIAGSKEL--IDYLRTP-S--PSALY------------------ATSLSPPVAQQILTSVKHIM-GEDGTNRGRQK 406 (519)
T ss_pred c--ceecCcHHH--HhhhccC-C--Cceee------------------cccCChHHHHHHHHHHHhhc-CCCcccHHHHH
Confidence 4 889999988 4433211 0 01001 11234556665555544432 2222 2455
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC
Q 038499 381 KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG 460 (609)
Q Consensus 381 ~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G 460 (609)
.++..++..+++..|+.. ++.++++.++ |++-+.+.. +. ...++.+.|+++ +|.+..+
T Consensus 407 ~~~l~~ns~yfr~~l~~~-gfivyG~~dS---pVvplll~~-~~----------------k~~~f~r~~l~~-nigvVvv 464 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKM-GFIVYGNNDS---PVVPLLLYG-PA----------------KIVAFSREMLER-NIGVVVV 464 (519)
T ss_pred HHHHHhhhHHHHHhhhcC-cEEEecCCCC---CcceeeecC-cc----------------cccHHHHHHHhc-CceEEEE
Confidence 667778888999999886 9999998654 444444444 21 123556666554 7777665
Q ss_pred cccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccccc
Q 038499 461 CACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFL 529 (609)
Q Consensus 461 ~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~ 529 (609)
...+.|.- .+.+|++.+..++.|+++++++.+..+-+..+.+.
T Consensus 465 gfPatpl~--------------------------e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~~~ 507 (519)
T KOG1357|consen 465 GFPATPLL--------------------------ESRARFCLSASHTKEDLDRALEVIDRVGDEDGVKY 507 (519)
T ss_pred eCCCchHH--------------------------HhHHHhhhcccccHHHHHHHHHHHhhhchhhccee
Confidence 55443421 25679998888999999999999999886655443
No 283
>PLN02624 ornithine-delta-aminotransferase
Probab=99.70 E-value=3e-14 Score=156.13 Aligned_cols=346 Identities=17% Similarity=0.183 Sum_probs=198.6
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..|+ -|+|..+. |-..+.|.+++.+++.... .... ........++.+.++++++.
T Consensus 65 ~G~~l~d~dG~---~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~-~~~~------~~~~~~~~~la~~L~~~~~~-- 132 (474)
T PLN02624 65 KGSRIWDPEGK---KYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLT-LSSR------AFYNDKFPEFAEYLTSMFGY-- 132 (474)
T ss_pred eeCEEEECCCC---EEEEcccchhcccCCCCCHHHHHHHHHHHHhcC-Cccc------ccCCHHHHHHHHHHHhhcCC--
Confidence 34555555554 48887543 4557899999999887531 1110 01234566788888888864
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------ceE
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------AEV 205 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~~v 205 (609)
+.++|+.+|+++.-.++-.+...... + +. .++++..|+.-...||+.. ..+...+ ..+
T Consensus 133 -~~~~f~~SGseA~e~AlklAr~~~~~---~----~g-~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~ 203 (474)
T PLN02624 133 -DMVLPMNTGAEGVETAIKLARKWGYE---K----KG-IPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGH 203 (474)
T ss_pred -CeEEEeCChHHHHHHHHHHHHHHHHh---h----cC-CCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCc
Confidence 37889988988633322111100000 0 00 0222334555555555542 2222111 112
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc--
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE-- 278 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~-- 278 (609)
..++.+ |++.|++.++.. .+++.+++++.++|++|.+.| +++|.++|++||+++|+|++|.+ +...
T Consensus 204 ~~~~~~-----d~~~l~~~l~~~--~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~ 276 (474)
T PLN02624 204 LKVDFG-----DLDALEKIFEED--GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKM 276 (474)
T ss_pred eEeCCC-----CHHHHHHHHHhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcch
Confidence 333332 789999988632 246789999999999999988 99999999999999999999873 2111
Q ss_pred --ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 279 --IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 279 --id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
.+... ...|++++| |.+|++ ..+|++++++++ +..+.+...+ . ...+
T Consensus 277 ~a~~~~~---i~pDiv~ls--K~lggG~~pigav~~~~~i--~~~~~~~~~~-~----------------------T~~g 326 (474)
T PLN02624 277 LACDWEE---VRPDVVILG--KALGGGVIPVSAVLADKDV--MLCIKPGEHG-S----------------------TFGG 326 (474)
T ss_pred hhHHhcC---CCCCEEEec--ccccCCCCcceeeeecHHH--HhHhccCCcC-C----------------------CCCC
Confidence 11111 146888875 999876 358999988877 3333222110 0 0023
Q ss_pred ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCc-eEEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 356 TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQN-IKILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 356 tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
.|.....+.+++... +. +.+.++..++.+++++.|.+ ++. +.-+. .+..++.+.+.. +.
T Consensus 327 ~pl~~aaa~aaLe~l--~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vr----g~G~~~~i~l~~-~~------ 390 (474)
T PLN02624 327 NPLASAVAMAALQVV--QD---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVR----GRGLLNAVVLNS-PK------ 390 (474)
T ss_pred CHHHHHHHHHHHHHH--Hh---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE----eeEEEEEEEecC-CC------
Confidence 333333334444432 11 23344455555555555543 332 21111 122344433322 10
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
. .......+++.|.+ .||.+.++ .++++||++++.+|++|
T Consensus 391 -----~-~~~~a~~~~~~L~e-~GV~v~p~---------------------------------~~~~lR~~p~l~~t~e~ 430 (474)
T PLN02624 391 -----L-GPVSAYDVCLKLKE-RGLLAKPT---------------------------------HDTIIRLAPPLSISEDE 430 (474)
T ss_pred -----c-ChHHHHHHHHHHHh-CCeEEecC---------------------------------CCCEEEEECCccCCHHH
Confidence 0 00124577888865 69988632 13789999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 038499 511 FEFTLEALEFIAIY 524 (609)
Q Consensus 511 id~ll~al~~v~~~ 524 (609)
+++++++|++++..
T Consensus 431 id~~l~~L~~~l~~ 444 (474)
T PLN02624 431 LQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988755
No 284
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.70 E-value=2.3e-14 Score=154.54 Aligned_cols=345 Identities=13% Similarity=0.150 Sum_probs=194.9
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..+ .|-..+.|.+++.+.+........ . .......++.+.++++.+.
T Consensus 29 ~~G~~~~d~dG~~---~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~----~---~~~~~~~~l~~~l~~~~~~- 97 (403)
T PRK05093 29 GEGSRVWDQQGKE---YIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN----V---FTNEPALRLAKKLIDATFA- 97 (403)
T ss_pred eecCEEEeCCCCE---EEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC----c---cCCHHHHHHHHHHHhhCCC-
Confidence 4456666666643 888754 356778999999888764321111 0 0123345788888888764
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc------------CceE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS------------LAEV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~------------G~~v 205 (609)
+.++|+.||+.+...++-.+.... ...-..+...+|.+....|.+....+... ...+
T Consensus 98 --~~~~~~~sGseA~e~a~klar~~~---------~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (403)
T PRK05093 98 --ERVFFANSGAEANEAAFKLARRYA---------CDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADI 166 (403)
T ss_pred --CEEEEeCchHHHHHHHHHHHHHHH---------hhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCc
Confidence 278888888886443332111100 00001233324444545555444333221 1223
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccccc
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEID 280 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~id 280 (609)
+.++.+ |++++++.+. +++++|+++.+++..|.+.+ +++|.++|++||+++|+|++++. +...-.
T Consensus 167 ~~~~~~-----d~~~l~~~l~-----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~ 236 (403)
T PRK05093 167 THVPFN-----DLAAVKAVID-----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL 236 (403)
T ss_pred EEeCCC-----CHHHHHHHhc-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 444332 7899999887 57888888854444455434 88999999999999999999773 221110
Q ss_pred C--CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 281 V--RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 281 ~--~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
. ... .-..|++ |+.|.+++...+|++++++++ .+.+.....+ ....+.|.
T Consensus 237 ~~~~~~-~~~pdi~--s~sK~l~~G~rig~vv~~~~i--~~~l~~~~~~-----------------------~t~~~~~~ 288 (403)
T PRK05093 237 FAYMHY-GVTPDIL--TSAKALGGGFPIGAMLTTAEI--ASHFKVGTHG-----------------------STYGGNPL 288 (403)
T ss_pred hhhhhc-CCCCCEE--EecccccCCcceEEEEEcHHH--HhhcCCCCCC-----------------------CCCCCCHH
Confidence 0 000 0134654 557999854459999999988 3444321110 00122333
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAI-LSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
....+.+++++. . .+.+.++.+++.+++.+.|+++. .+.+... .+..+. +.+.+.+ +.
T Consensus 289 ~~~aa~a~L~~~--~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~G~~~~~~l~~-~~------------ 348 (403)
T PRK05093 289 ACAVAEAVFDII--N---TPEVLEGVKARRQRFVDGLQKINQKYGVFSE--IRGMGLLIGAELKP-QY------------ 348 (403)
T ss_pred HHHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhhCCCeEe--EeeCceEEEEEecC-cc------------
Confidence 333334444443 1 12344566667777777776541 1111111 111233 3333322 10
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLE 516 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~ 516 (609)
.-....++..|.+ .||.+.++ .++++|+++++.+++++++.+++
T Consensus 349 --~~~~~~~~~~l~~-~Gv~v~~~---------------------------------g~~~lRl~~~~~~~~~~i~~~~~ 392 (403)
T PRK05093 349 --KGRARDFLNAAAE-EGVMVLVA---------------------------------GPDVLRFAPSLVIEEADIDEGLA 392 (403)
T ss_pred --hhHHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEeCCCCCCHHHHHHHHH
Confidence 0134577777766 49988731 13789999998899999999999
Q ss_pred HHHHHHHh
Q 038499 517 ALEFIAIY 524 (609)
Q Consensus 517 al~~v~~~ 524 (609)
+|++++..
T Consensus 393 ~l~~~l~~ 400 (403)
T PRK05093 393 RFEKAVAK 400 (403)
T ss_pred HHHHHHHH
Confidence 99998764
No 285
>PRK15029 arginine decarboxylase; Provisional
Probab=99.69 E-value=9.4e-15 Score=164.63 Aligned_cols=173 Identities=18% Similarity=0.196 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
..+.++++..|+.+|++.. .|.-||||.++.+++.++ .++|| .|+++...|-|...++..
T Consensus 205 G~I~eAq~~aA~~fgA~~t---~FlvNGST~gn~a~i~a~---------------~~~gd--~Vlv~RN~HKSv~~al~L 264 (755)
T PRK15029 205 GAFGESEKYAARVFGADRS---WSVVVGTSGSNRTIMQAC---------------MTDND--VVVVDRNCHKSIEQGLIL 264 (755)
T ss_pred cHHHHHHHHHHHHhCCCcE---EEEeCChhHHHHHHHHHh---------------cCCCC--EEEeecccHHHHHHHHHH
Confidence 4688999999999999743 444489999888877765 48999 699999999999999999
Q ss_pred cCceEEEEecCC--C---CCCC-----HHHHHHHHhhhcc-----CCCceEEEEecccCccccccCHHHHHHHHHHhCCe
Q 038499 201 SLAEVVEIGLDD--D---GLLD-----IEALRSKLELYKD-----AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGF 265 (609)
Q Consensus 201 ~G~~vv~v~~~~--~---g~ld-----~e~L~~al~~~~~-----~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~ 265 (609)
.|++++++.... . +.++ ++.++++|.++.. ..+++++++++| |..|++.|+++|+++||++|+.
T Consensus 265 ~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~ 343 (755)
T PRK15029 265 TGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDR 343 (755)
T ss_pred cCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCe
Confidence 999999996432 2 3455 9999999976421 134558888876 4669999999999999999999
Q ss_pred EEEeccccCCc--cc-cc-CCCC-----CCCCcc-EEEEcCCCCCCCCCCcEEEEEech
Q 038499 266 ACFDFAASGPY--VE-ID-VRSG-----QTDGYD-AIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 266 vivD~A~~~~~--~~-id-~~~~-----~~~~~D-~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
++||+||++-. .+ .. ..++ ...|+| +++-|.||.+++....++|.++..
T Consensus 344 llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 344 LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred EEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 99999987521 11 11 1111 114788 888999999998777788888654
No 286
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.69 E-value=5.2e-15 Score=149.77 Aligned_cols=310 Identities=16% Similarity=0.119 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHhC--------CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCLG--------GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~g--------~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..+.|+.+|+++. .+|+ .++++ +|+|++...++-.|. .||| ..+++.+.|++.
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~-~~Vv~-~G~T~ane~l~fcLa---------------dpgd--afLvPtPyY~gf 183 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPE-RVVVT-NGATSANETLMFCLA---------------DPGD--AFLVPTPYYPGF 183 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCcc-ceEEe-cccchhhHHHHHHhc---------------CCCc--eeeecCCCCCcc
Confidence 4566777777764 3566 78888 788888888887775 7999 799999999988
Q ss_pred HHHHHH-cCceEEEEecCC--CCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccCHHH---HHHHHHHhCCeEE
Q 038499 195 LLSWRQ-SLAEVVEIGLDD--DGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSDTRS---IARLLHQYGGFAC 267 (609)
Q Consensus 195 ~~~~~~-~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~dl~~---I~~la~~~g~~vi 267 (609)
..-.+. .|++++.|.... +.++++++||+++.+.+.. .+.+-+++++|+||.|.+.+-++ +..++.++++.+|
T Consensus 184 drdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI 263 (471)
T KOG0256|consen 184 DRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVI 263 (471)
T ss_pred cccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEE
Confidence 655443 599999998765 4589999999999764433 36678999999999999988554 6667789999999
Q ss_pred EeccccCCccc----cc---CCCCC--CCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccc
Q 038499 268 FDFAASGPYVE----ID---VRSGQ--TDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGF 337 (609)
Q Consensus 268 vD~A~~~~~~~----id---~~~~~--~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~ 337 (609)
+|+.+++..-. +. +.... ..+..-++.|.+|=+|-|+ ..|+++...+-+. ......
T Consensus 264 ~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vv-saA~km------------- 329 (471)
T KOG0256|consen 264 SDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVV-SAATKM------------- 329 (471)
T ss_pred eehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHH-HHHHHH-------------
Confidence 99986642111 11 11110 1133467889999999775 4899998766521 111100
Q ss_pred ccccccccccccccccCCChhHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcce
Q 038499 338 NEKDTLYLEDIEERESGGTPQVIQMIRAAL---AFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAI 414 (609)
Q Consensus 338 ~~~~~~~~~~~~~r~~~gtp~i~~~~~aal---~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~ 414 (609)
.++ ...+...+...+.+ ..+. ......-..|.+....++.+.|+++ ||..+.. ..++
T Consensus 330 ------------ssf-~~vSs~tQ~~la~LLSD~~f~--~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s----~AGl 389 (471)
T KOG0256|consen 330 ------------SSF-GLVSSQTQYLLASLLSDEEFT--REYLRENNKRLRIRHRYIVEGLKAL-GIPCLKS----NAGL 389 (471)
T ss_pred ------------hhc-cCCcHHHHHHHHHHhchHHHH--HHHHHHHHHHHHHHHHHHHhhHHhc-CCceeec----CCee
Confidence 000 11223333322221 1111 1123445566666677888888887 8888765 4678
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
|+|.-.. ..- ....+...-++.+.+.+.-++.+.+|.+|- .+ -
T Consensus 390 F~wvDlr-~lL---------~s~tfe~El~Lw~~i~~~vklnlSpG~s~~---C~------------------------E 432 (471)
T KOG0256|consen 390 FCWVDLR-KLL---------TSLTFEGELELWERILDNVKLNLSPGSSCH---CH------------------------E 432 (471)
T ss_pred EEEEEhH-Hhc---------CcCChHHHHHHHHHHHHhhccccCCCCcce---ec------------------------C
Confidence 8887543 110 011122233566666676799999997765 12 2
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
|||+|++|.. +.++.++-.++.|+.++.
T Consensus 433 pGWFRvcFAn-~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 433 PGWFRVCFAN-MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CCeEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 7999999963 455555658888888777
No 287
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.69 E-value=9.4e-15 Score=149.14 Aligned_cols=326 Identities=16% Similarity=0.097 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 118 HTTNMVHEASNYIKKCLGGGQE--DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 118 ~~~~~~~e~r~~ia~~~g~~~~--~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
+..++...+++.....+..++. ..|++| +|.|.++..+++.+ +++|| .|++..+.+++.+
T Consensus 101 G~peLl~fik~h~~~~ih~p~~~~wdiiit-~G~t~~l~~~l~~~---------------~N~gd--~vlie~~ty~~AL 162 (472)
T KOG0634|consen 101 GIPELLLFIKDHNRPTIHAPPYKNWDIIIT-NGNTDGLFKVLRTL---------------INRGD--HVLIEEYTYPSAL 162 (472)
T ss_pred CcHHHHHHHHHhccccccCCCCCCceEEEe-cCCchHHHHHHHHh---------------hcCCC--ceEEecccchHHH
Confidence 3445555555543333333322 378898 78888999998887 48899 8999999999999
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC----CCce-EEEEecccCccccccCHH---HHHHHHHHhCCeEE
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA----KRPI-LGSFSACSNVTGIYSDTR---SIARLLHQYGGFAC 267 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~----~~~~-lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vi 267 (609)
.+.+..|++++.|++|.+| +++|.|++.+...... ++++ +..+...+||||...+++ +|.+||++|++++|
T Consensus 163 ~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 163 QSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred HhccccCceEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 9999999999999998877 7999999999764432 4565 778999999999998864 69999999999999
Q ss_pred EeccccCCccc-------c----------------cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC
Q 038499 268 FDFAASGPYVE-------I----------------DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS 324 (609)
Q Consensus 268 vD~A~~~~~~~-------i----------------d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~ 324 (609)
.|+.+..-... . ++..++.+|..+-.-|++|.++....+|++.+++.+ ++.+
T Consensus 242 eDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~--l~ri--- 316 (472)
T KOG0634|consen 242 EDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLF--LKRI--- 316 (472)
T ss_pred ecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHH--HHHH---
Confidence 99986532111 0 011112234334455899999844569999999876 3332
Q ss_pred ccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHhCC-CCc
Q 038499 325 TCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKE--YIGHEVIKKQEETYIERALERLLP-NQN 400 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~-~p~ 400 (609)
...++. -..+...+.+.+ .+.+..|..+ ...+..++......+..+..+|.+ +|.
T Consensus 317 l~~ae~---------------------~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~ 375 (472)
T KOG0634|consen 317 LDLAEV---------------------ATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPK 375 (472)
T ss_pred hhhcce---------------------eecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 111111 001111222322 3333334221 011233333333444455555543 343
Q ss_pred --eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCC-hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChh
Q 038499 401 --IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLH-GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 401 --i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~ 477 (609)
+++..| ..+.|.++-.+ -...+ +...++ .+++...+..++||.+..|..+..-....
T Consensus 376 ~~~~~~~P----~aGmFiwv~i~-~~~~~--------~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s------- 435 (472)
T KOG0634|consen 376 SVCEYHPP----KAGMFIWVEIP-YINFD--------TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESS------- 435 (472)
T ss_pred CeeEEecC----CcceEEEEEec-ccccc--------cccchHHHHHHHHHHHHHCCeEEecCceeEEcCccC-------
Confidence 455544 56777666553 11000 111133 44555555567899999887665321110
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
-.+-++|+++.+. ..|+++..++.+..++.+
T Consensus 436 ---------------~~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 436 ---------------WSKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ---------------CCcceEEEEeecC-CHHHHHHHHHHHHHHHHH
Confidence 0124899999754 667888888877777654
No 288
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.68 E-value=3.7e-14 Score=162.07 Aligned_cols=310 Identities=12% Similarity=0.092 Sum_probs=203.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
.+.+.-+.+-+.++.++++.|.+.. +..+. .++|++..+++.+.. ...+++..|+|++..||..
T Consensus 103 isQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~-d~atA~aEa~~~a~~--------------~~~~~~~~vlv~~~~hP~~ 166 (939)
T TIGR00461 103 ISQGRLEALLNFQTVVSDLTGLPVA-NASLL-DEGTAAAEAMALSFN--------------VSKKKANKFFVAKDLHPQT 166 (939)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCChh-hhhcc-chhhHHHHHHHHHHH--------------hhcCCCCEEEECCCCCcch
Confidence 4556778888999999999999866 44454 466666665555432 1222233799999999998
Q ss_pred HHHHH----HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWR----QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~----~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...++ ..|.+|+.++ +++|++.+ ++..+++. ..|.+|.+.|+++|++++|++|++++++.
T Consensus 167 ~~v~~t~a~~~g~~v~~~~--------~~~l~~~~-------~~~~v~~q-~Pn~~G~ied~~~i~~~~h~~gal~~~~a 230 (939)
T TIGR00461 167 KSVLHTRAKPFGIEVIVVD--------CSDIKKAV-------DVFGCLLQ-YPATDGSILDYKQLIDALHSHKSLVSVAA 230 (939)
T ss_pred HHHHHHHHHhcCcEEEEEc--------HHHHhhcC-------CEEEEEEE-CCCCCeEEecHHHHHHHHHHcCCEEEEEe
Confidence 87766 4688988874 44555443 24444444 45788999999999999999999999965
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCC-----CCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFL-----GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~l-----ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
-........+..++ |+|+++.+.++|. |||. .|++.+++++ .+.++....|.. .+...........+.
T Consensus 231 d~~al~ll~~Pge~---GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~l--~r~lPgrivG~s-~D~~G~~~~~l~Lqt 303 (939)
T TIGR00461 231 DLMALTLLTPPGHY---GADIVLGSSQRFGVPMGYGGPH-AAFFAVKDEY--NRKMPGRIVGVS-KDALGNTALRLALQT 303 (939)
T ss_pred chHHhCCcCCHHHc---CCcEEeeCCCccCCCCCCCCCc-eeeeeecHhh--HhhCCCCceeEE-ecCCCCccceeeccc
Confidence 43322222222233 8999987777663 5666 7999999998 556655444421 111000000001222
Q ss_pred ccccccccCCChhHHHH-----HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec
Q 038499 346 EDIEERESGGTPQVIQM-----IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~-----~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~ 420 (609)
.....|.+.+|+||... +++++-.......|.+.|.++...++.++.+.|.+ .|+++..+ +....+.+...
T Consensus 304 ReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~---~fF~~~~v~~~ 379 (939)
T TIGR00461 304 REQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINK---TWFDTLTVKVG 379 (939)
T ss_pred ccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCC---CccceEEEEeC
Confidence 22345666788776432 22332122234567889999999999999999988 58988754 12222333322
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
. .+...+.+.|.+ .||.++.. ..+.+++
T Consensus 380 ~------------------~~~~~i~~~~~~-~gi~l~~~---------------------------------~~~~i~~ 407 (939)
T TIGR00461 380 N------------------GISSELLKAAEE-FNINLRAV---------------------------------DTTTVGI 407 (939)
T ss_pred C------------------CCHHHHHHHHHH-CCCeeeec---------------------------------CCCEEEE
Confidence 1 246788888866 59987721 1368999
Q ss_pred ecCCCCCHHHHHHHHHHHH
Q 038499 501 SFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~ 519 (609)
|++.++|++|++.+++++.
T Consensus 408 s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 408 ALDETTTKADVENLLKVFD 426 (939)
T ss_pred EeecCCCHHHHHHHHHHhc
Confidence 9999999999999999995
No 289
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.67 E-value=1.4e-14 Score=146.16 Aligned_cols=343 Identities=17% Similarity=0.200 Sum_probs=224.3
Q ss_pred CCCC--ChHHHHHHHHHhhcCCccCC--CCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHh
Q 038499 85 ASGR--SLRYIENYIINNVLPFYGNT--HTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVM 160 (609)
Q Consensus 85 a~g~--~~~~v~~ai~~~~~~~~~n~--~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l 160 (609)
++|| .|+.|++...+.+..+.+.. -.+.|+.+........++++.++++++.+.+..|+|+.+|+|+...++..-|
T Consensus 10 saGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nL 89 (365)
T COG1932 10 SAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNL 89 (365)
T ss_pred CCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhh
Confidence 3355 46788888888887664411 1123456677788999999999999999998899999999998777765544
Q ss_pred cccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc--eEEEEecCC---CCCCCHHHHHHHHhhhccCCCce
Q 038499 161 GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA--EVVEIGLDD---DGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~--~vv~v~~~~---~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
+.......|.....+..+...+ +..+- .+..+.... ....+++... +. ++..
T Consensus 90 ---------------l~~~~~~yv~~g~Ws~~a~~eA-~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-----~~~a 146 (365)
T COG1932 90 ---------------LGKRGTDYVDTGAWSEFAIKEA-KKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-----DNDA 146 (365)
T ss_pred ---------------hcccCceeEeeeehhHhHHHHH-HHhcccccccccceeccCccCCCChhhcc--cC-----CCcc
Confidence 1222100355554444433221 22332 222222111 1233444332 22 3344
Q ss_pred EEEEecccCccccccCH-HHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 236 LGSFSACSNVTGIYSDT-RSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl-~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
.|.+|+..+.+|+-.+. ..+.. +.++++|.+..+...++|+.. +|++.++.+|.+| |.|.++++++++
T Consensus 147 yv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iDvsk-----~dviyagaQKnlG-paGltvvIvr~~ 215 (365)
T COG1932 147 YVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSRPIDVSK-----YDVIYAGAQKNLG-PAGLTVVIVRPD 215 (365)
T ss_pred EEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcCCCChhH-----cceEEEehhhccC-ccceEEEEEcHH
Confidence 58899988999998762 22221 288999999999999999975 5999999999998 878999999999
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF-WVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~-~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
+ +.+...... +....|...........||++.......+.| |++...|.+.+.++.++.++.+.+
T Consensus 216 ~--l~r~~~~~~------------P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~ 281 (365)
T COG1932 216 L--LERAESYTL------------PSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYD 281 (365)
T ss_pred H--HhcccccCC------------chHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9 555533310 1112233333444556788887765444443 466788999999999999999999
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.+.+.+-+.-+-.....+.-+++|.+.. .. ++..++.+.. + .|...-.| |+.
T Consensus 282 ~id~s~fy~~~v~~~~RS~mnV~f~~~~-~~---------------ld~~fv~eae-~-~gl~~lkG--------hr~-- 333 (365)
T COG1932 282 WIDKSDFYRNLVAKANRSRMNVTFTLVD-AE---------------LDKGFVAEAE-A-AGLIYLKG--------HRS-- 333 (365)
T ss_pred HHHhCCccccccchhhccceeEEEEcCc-HH---------------HHHHHHHHHH-H-cCCceecc--------ccC--
Confidence 9988754443333233445677777765 32 4444554444 3 35544322 322
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+|.+|+|+...+..++++.+++.|++..+.
T Consensus 334 ---------------------vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 334 ---------------------VGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ---------------------CCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 456999999999999999999999987654
No 290
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.67 E-value=5.5e-14 Score=151.54 Aligned_cols=344 Identities=15% Similarity=0.135 Sum_probs=196.6
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+++.++.+..|+ .|+|..+ .|-..+.|.+++.+++...... ... .......++.+.++++.+.
T Consensus 28 ~~G~~~~d~dG~---~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~~~------~~~~~~~~la~~l~~~~~~- 96 (406)
T PRK12381 28 GEGSRLWDQQGK---EYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-GNG------YTNEPVLRLAKKLIDATFA- 96 (406)
T ss_pred eecCEEEeCCCC---EEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccc-cCc------cCCHHHHHHHHHHHhhCCC-
Confidence 455666666664 3888765 4666789999999988653211 111 1123456788888888754
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEE-CCCCccchHHHHHHcCce------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFV-GPHEHHSNLLSWRQSLAE------------ 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~~------------ 204 (609)
+.++|+.||+++....+-.+.... .....++.. .|+. ....|......+...+..
T Consensus 97 --~~v~~~~sGseA~e~Alk~ar~~~---------~~~~~~~r~-~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 164 (406)
T PRK12381 97 --DRVFFCNSGAEANEAALKLARKYA---------HDRYGSHKS-GIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPD 164 (406)
T ss_pred --CeEEEcCCcHHHHHHHHHHHHHHH---------hhcCCCCCC-eEEEECCCcCCcchhHHhhcCCcccccCCCCCCCC
Confidence 379999888886333332221100 000112222 4554 444444444344333311
Q ss_pred EEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc-----cCHHHHHHHHHHhCCeEEEeccccC-Cccc
Q 038499 205 VVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY-----SDTRSIARLLHQYGGFACFDFAASG-PYVE 278 (609)
Q Consensus 205 vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~-----~dl~~I~~la~~~g~~vivD~A~~~-~~~~ 278 (609)
+..++. .|+++|++.+. +++.+++++ |.+++|-+ ..+++|.++|++||+++|+|+++.. +...
T Consensus 165 ~~~~~~-----~d~~~l~~~l~-----~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G 233 (406)
T PRK12381 165 IRHAAY-----NDLNSASALID-----DQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG 233 (406)
T ss_pred eeEeCC-----CCHHHHHHhcc-----CCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc
Confidence 222222 37899999887 578888886 55666543 2378899999999999999999742 2211
Q ss_pred --ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 279 --IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 279 --id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
....... -..|++ ++.|.+||...+|++++++++ ++.+.+...+ . ...+.
T Consensus 234 ~~~~~~~~~-v~pDi~--t~sK~l~gG~~ig~~~~~~~~--~~~~~~~~~~-~----------------------t~~~~ 285 (406)
T PRK12381 234 ELYAYMHYG-VTPDVL--TTAKALGGGFPIGAMLTTEKC--ASVMTVGTHG-T----------------------TYGGN 285 (406)
T ss_pred chhhhHhhC-CCCCEE--EehhhhhCCCceEEEEEcHHH--HhhcCCCCCC-C----------------------CCCCC
Confidence 0000110 135664 566999755558999999888 4444221110 0 01233
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAI-LSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~ 434 (609)
|.......+++++. + .+.+.++.+++.+++.+.|+++. ...++.. ....+. +.+.+.. +.
T Consensus 286 pl~~aaa~a~l~~l--~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--vrg~Gl~~~~~l~~-~~---------- 347 (406)
T PRK12381 286 PLASAVAGKVLELI--N---TPEMLNGVKQRHDWFVERLNTINARYGLFSE--IRGLGLLIGCVLNA-EY---------- 347 (406)
T ss_pred HHHHHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEE--EecCeEEEEEEecC-ch----------
Confidence 33333344445443 1 23456677777778877776541 1111111 011133 3333222 10
Q ss_pred CCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 038499 435 ETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFT 514 (609)
Q Consensus 435 ~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~l 514 (609)
.-....+.+.|.+ .||.+.+. .++.+|+++++.+|++|++++
T Consensus 348 ----~~~~~~~~~~l~~-~Gv~v~~~---------------------------------g~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 348 ----AGKAKQISQEAAK-AGVMVLIA---------------------------------GPNVVRFAPALNISEEEITTG 389 (406)
T ss_pred ----hhHHHHHHHHHHH-CCcEEeeC---------------------------------CCCEEEEeCCccCCHHHHHHH
Confidence 0024567777765 59988621 136899999998999999999
Q ss_pred HHHHHHHHHhc
Q 038499 515 LEALEFIAIYG 525 (609)
Q Consensus 515 l~al~~v~~~~ 525 (609)
+++|++++...
T Consensus 390 ~~~l~~~l~~~ 400 (406)
T PRK12381 390 LDRFARACERF 400 (406)
T ss_pred HHHHHHHHHHH
Confidence 99999988653
No 291
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=2.6e-13 Score=145.43 Aligned_cols=343 Identities=15% Similarity=0.124 Sum_probs=196.0
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..+ .|-..+.|.+++.+++.... ..... ...+...++.+.+.+..+.
T Consensus 25 ~~G~~~~d~dG~---~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~~~------~~~~~~~~la~~l~~~~~~- 93 (395)
T PRK03715 25 GKGSWLYDHNGK---RYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSPA------FYNEPMAKLAGLLTQHSCF- 93 (395)
T ss_pred eecCEEEECCCC---EEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-ccccc------ccCHHHHHHHHHHhhccCC-
Confidence 445566556664 4888764 35667889999988876432 11110 1123344455555544322
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEE---EEecCCC-
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVV---EIGLDDD- 213 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv---~v~~~~~- 213 (609)
+.++|+.||+.+.... +++... . ....+++...+|......|.+....+...+.... ..|....
T Consensus 94 --~~v~f~~SGseA~e~A-ik~ar~-~--------~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~ 161 (395)
T PRK03715 94 --DKVFFANSGAEANEGA-IKLARK-W--------GRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGF 161 (395)
T ss_pred --CEEEEeCCcHHHHHHH-HHHHHH-H--------hhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCc
Confidence 3789998888863333 332210 0 0001223222455555566665555554443211 1111110
Q ss_pred ---CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC-cccc--cCCC
Q 038499 214 ---GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YVEI--DVRS 283 (609)
Q Consensus 214 ---g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~-~~~i--d~~~ 283 (609)
...|+++|++.+. +++.+++++.+++..|.+.| +++|.++|++||+++|+|+++++- ...- -...
T Consensus 162 ~~~~~~d~~~l~~~l~-----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~ 236 (395)
T PRK03715 162 PKAELNDIASVEKLIT-----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYEL 236 (395)
T ss_pred eeeCCchHHHHHHHcC-----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhh
Confidence 1247899999886 57889999999999999987 999999999999999999998731 1110 0011
Q ss_pred CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH
Q 038499 284 GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI 363 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~ 363 (609)
.. -.+|+++++ |.+||...+|.+++++++ . ...+...+ ++ ..|.|...+..
T Consensus 237 ~g-v~PDi~t~g--K~lg~G~p~~av~~~~~i--~-~~~~~~~~-~T----------------------~~g~pl~~aaa 287 (395)
T PRK03715 237 SG-IEPDIMTLG--KGIGGGVPLAALLAKAEV--A-VFEAGDQG-GT----------------------YNGNPLMTAVG 287 (395)
T ss_pred cC-CCCceeeeh--hhhhCCcceEEEEEcccc--c-cccCCCcC-CC----------------------CCCCHHHHHHH
Confidence 11 145887665 999875557888888887 2 11111000 00 12344444444
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 364 RAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
.++++.+ + .+.+.++.+++.+++.+.|+++ .++. +-+ ...++.+.+.. .
T Consensus 288 la~L~~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG-----~Glm~~i~l~~-~---------------- 340 (395)
T PRK03715 288 VAVISQL--L---APGFLEGVRARGEYLKEKLLELSEERGLEGERG-----EGLLRALLLGK-D---------------- 340 (395)
T ss_pred HHHHHHH--H---hccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc-----ceeEEEEEecC-c----------------
Confidence 4555544 2 2345566677777777766542 1222 211 23444444433 1
Q ss_pred CChHHHHHHHhhh--cCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDL--FGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 440 l~~~~v~~~L~~~--~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
....+.+.+.++ .||.+.+. .+..+|++++..+|++|++.++++
T Consensus 341 -~~~~~~~~~~~~~~~Gi~~~~~---------------------------------~~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 341 -IGPQIVEKARDMQPDGLLLNAP---------------------------------RPNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred -hHHHHHHHHHhccCCCEEEeec---------------------------------CCCEEEEeCCcccCHHHHHHHHHH
Confidence 123444444321 28876521 136799999999999999999999
Q ss_pred HHHHHHh
Q 038499 518 LEFIAIY 524 (609)
Q Consensus 518 l~~v~~~ 524 (609)
|++++..
T Consensus 387 l~~~l~~ 393 (395)
T PRK03715 387 LRSVLDK 393 (395)
T ss_pred HHHHHHh
Confidence 9998865
No 292
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=5.1e-14 Score=152.58 Aligned_cols=358 Identities=16% Similarity=0.126 Sum_probs=200.6
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..+. |-..+.|.+++.+++.... .... .....+...++.+.|.+.+...
T Consensus 31 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~ 101 (423)
T PRK05964 31 AEGAYLYLADGR---ELIDAISSWWVATHGHNHPYIDQAIREQLDRLD-HVIF-----AGFTHEPAERLAQRLVALTPGG 101 (423)
T ss_pred ccccEEEeCCCC---EEEEcchhHHhccCCCCCHHHHHHHHHHHhhCC-Cccc-----cccCCHHHHHHHHHHHHhCCCC
Confidence 455666666664 48997644 6667899999998886531 1111 0012344556777888887533
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc-C------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-L------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G------------~~ 204 (609)
.+ .+.|+.||+.+ +...+++-- ... ...-+++. ..|+.-...||+....+... + ..
T Consensus 102 ~~-~v~f~~sGseA-~e~A~klar-~~~-------~~~~~~~r-~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~ 170 (423)
T PRK05964 102 LD-HVFFSDSGSVA-VEVALKMAL-QYW-------RNRGEPGR-SRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE 170 (423)
T ss_pred CC-EEEEeCCcHHH-HHHHHHHHH-HHH-------HhcCCCCC-cEEEEEcCCcCCccHHHHhcCCCccccccccCcCCC
Confidence 33 89999888886 333322210 000 00001233 35776666677654433221 1 12
Q ss_pred EEEEecCCC--CCCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cc
Q 038499 205 VVEIGLDDD--GLLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PY 276 (609)
Q Consensus 205 vv~v~~~~~--g~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~ 276 (609)
+..++...+ ...++++|++.+.+. .+++..+++.. +++..|...+ +++|.++|++||+++|+|+++.+ +.
T Consensus 171 ~~~~~~~~~d~~~~~~~~l~~~l~~~--~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr 248 (423)
T PRK05964 171 QVTAPFPPDGYEQATLDALEALLEKH--AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGR 248 (423)
T ss_pred CEEeCCCcchhHHHHHHHHHHHHHhC--CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 233333221 112378888888632 14566777776 5788888875 78999999999999999999853 22
Q ss_pred ccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 VEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 ~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
... -.... .-.+|+++++ |+++|+ ..+|+++.++++ .+.+.+.. .++. ...
T Consensus 249 ~G~~~a~~~~-~v~pDi~~~~--K~l~gG~~p~~av~~~~~i--~~~~~~~~-~~~~--------------------~~~ 302 (423)
T PRK05964 249 TGTLFACEQA-GVSPDIMCLS--KGLTGGYLPLAATLCTAEI--FEAFYSDD-RAKA--------------------FMH 302 (423)
T ss_pred CcchhHHHhc-CCCCCeeeee--hhhhcCcccceEEEEcHHH--HHhhhcCC-cccc--------------------ccc
Confidence 110 00111 0145877665 999876 468999999888 33332110 0000 001
Q ss_pred CCC--hhHHH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 354 GGT--PQVIQ--MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 354 ~gt--p~i~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
.+| .+.++ ...+++..+ +. +.+.++..++.+++.+.|+++.+...+... .....++.+.+.. ..
T Consensus 303 ~~T~~~np~~~aaa~a~l~~l--~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-rg~Gl~~~i~l~~-~~----- 370 (423)
T PRK05964 303 SPSYTANPLACAAANASLDLF--ED---EPVLERVAALSAGLAEGLEPFRDLPGVADV-RVLGAIGAVELDR-PV----- 370 (423)
T ss_pred CCCCCcCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEe-ecccEEEEEEecc-Cc-----
Confidence 122 22233 233344433 21 234566667777777766554222111110 0122344454433 10
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
. ......+.+.|.+ .||.+.+. .+.+|+++++.+|++
T Consensus 371 ------~--~~~~~~l~~~l~~-~Gv~v~~~----------------------------------~~~lR~~p~l~~t~e 407 (423)
T PRK05964 371 ------L--ERDGPALRAFALE-RGVLLRPL----------------------------------GNTIYLMPPYIITAE 407 (423)
T ss_pred ------c--hhHHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEeCCcccCHH
Confidence 0 0024567777765 59988621 257999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 038499 510 EFEFTLEALEFIAIY 524 (609)
Q Consensus 510 eid~ll~al~~v~~~ 524 (609)
|+|++++++++++++
T Consensus 408 dId~~v~~l~~al~~ 422 (423)
T PRK05964 408 ELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998865
No 293
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.66 E-value=9.7e-15 Score=150.84 Aligned_cols=158 Identities=22% Similarity=0.259 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH---
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR--- 199 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~--- 199 (609)
...+++.++++-|+.. .++|. ||..+ +..++..+ +++|+ .|+.....|......++
T Consensus 79 ~~~le~~iaal~ga~~--~l~fs-SGmaA-~~~al~~L---------------~~~g~--~iV~~~~~Y~gT~~~l~~~~ 137 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH--ALLFS-SGMAA-ITVALLHL---------------LPAGD--HIVATGDVYGGTLRILRKFL 137 (409)
T ss_pred hHHHHHHHHHHhCCce--EEEec-ccHHH-HHHHHHHh---------------cCCCC--cEEEeCCCcccHHHHHHHHH
Confidence 4567888999999874 35564 88875 44444444 36777 67777777877665544
Q ss_pred -HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 200 -QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 200 -~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
..|++...+..+ ++++++++++ +++++|++..|+||+..+.|+++|.++||++|+++|||.+-+.|+.
T Consensus 138 ~~~gie~~~vd~~-----~~~~~~~~i~-----~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~- 206 (409)
T KOG0053|consen 138 PKFGGEGDFVDVD-----DLKKILKAIK-----ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN- 206 (409)
T ss_pred HHhCceeeeechh-----hHHHHHHhhc-----cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-
Confidence 468899888776 7889999998 6899999999999999999999999999999999999999777632
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KAL 315 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~ 315 (609)
.+.-++ |+|+++-|..||++|-.- .|.++.+ .++
T Consensus 207 ~~pL~l---GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~ 243 (409)
T KOG0053|consen 207 QDPLPL---GADIVVHSATKYIGGHSDVIGGSVVLNSEEL 243 (409)
T ss_pred cChhhc---CCCEEEEeeeeeecCCcceeeeEEecCcHHH
Confidence 222233 799999999999998754 5788886 444
No 294
>PLN00144 acetylornithine transaminase
Probab=99.66 E-value=2.3e-13 Score=145.37 Aligned_cols=343 Identities=17% Similarity=0.123 Sum_probs=193.2
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..|+ -|+|..++ |-..+.|.+++.+++.... .... . ..+....++.+.+.+..+.
T Consensus 5 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~--~----~~~~~~~~la~~l~~~~~~-- 72 (382)
T PLN00144 5 KGCKLYDVEGK---EYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA-HVSN--V----YHTIPQVELAKRLVASSFA-- 72 (382)
T ss_pred eccEEEeCCCC---EEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC-Cccc--c----ccCHHHHHHHHHHHhcCCC--
Confidence 44556666664 38887543 5567899999999887531 1111 0 1123345566667666542
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-C----ceEEEECCCCccchH-HHHHHcCc---------
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-E----RWVVFVGPHEHHSNL-LSWRQSLA--------- 203 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d----~~~Vlv~~~~h~s~~-~~~~~~G~--------- 203 (609)
+.|.|+.|||++.-..+-.+..... +. ....+ + ++.|+.-...||+.. .++...+-
T Consensus 73 -~~v~f~~sGseA~e~AlklAr~~~~----~~----~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 143 (382)
T PLN00144 73 -DRVFFCNSGTEANEAAIKFARKYQR----VR----APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEP 143 (382)
T ss_pred -CeEEEeCCcHHHHHHHHHHHHHHHh----cc----CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCC
Confidence 3899998998863222211111000 00 00001 0 234665555555543 33322111
Q ss_pred ---eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC-
Q 038499 204 ---EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP- 275 (609)
Q Consensus 204 ---~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~- 275 (609)
.+..++.+ |+++|++.+.. +++.++++...+|+.|...+ +++|.++|++||+++|+|++++..
T Consensus 144 ~~~~~~~~~~~-----d~~~l~~~~~~----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g 214 (382)
T PLN00144 144 LMPGVTFVEYG-----NLEAARKLIQK----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG 214 (382)
T ss_pred CCCCeEEeCCC-----CHHHHHHhcCC----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 12333322 78999988863 46788888888999666543 678999999999999999997642
Q ss_pred ccc--c--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 276 YVE--I--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 276 ~~~--i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
... . +.... ..|++ ++.|.+++...+|++++++++ .+.+.+...+.
T Consensus 215 r~g~~~~~~~~~~---~PDi~--t~sK~l~~G~pig~v~~~~~~--~~~~~~~~~~~----------------------- 264 (382)
T PLN00144 215 RTGYLWAHEAYGV---EPDIM--TLAKPLAGGLPIGAVLVTEKV--ASAINPGDHGS----------------------- 264 (382)
T ss_pred ccchHhhhhhcCC---CCCEE--EecccccCCcceEEEEEcHHH--HhccCCCCCCC-----------------------
Confidence 221 1 11111 35744 456999866668999999888 34443211100
Q ss_pred ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 352 ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 352 ~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
...+.|-......+.+.+.. +..-.+.+.+..+.+.+.+.+.+.+.|.+ .+.+ .+.+.+....
T Consensus 265 T~~~~pl~~aaa~a~l~~i~-~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg------~G~~~~l~l~--------- 328 (382)
T PLN00144 265 TFAGGPLVCNAALAVLDKIS-KPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG------VGLLVGIQLD--------- 328 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhhCCCceeeec------CceEEEEEec---------
Confidence 01233333333444555542 11112333333333444444444444432 2222 2333333223
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
.....+...+.+ .||.+.++. ....+|++++...+++|
T Consensus 329 ---------~~~~~~~~~~~~-~Gv~i~~~~--------------------------------~~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 329 ---------VPAGPLVDACRD-SGLLVLTAG--------------------------------KGDVVRLVPPLVISEAE 366 (382)
T ss_pred ---------CccHHHHHHHHH-CCeEEeecC--------------------------------CCCEEEEeCCCccCHHH
Confidence 134567777765 599987531 12689999998889999
Q ss_pred HHHHHHHHHHHHHhc
Q 038499 511 FEFTLEALEFIAIYG 525 (609)
Q Consensus 511 id~ll~al~~v~~~~ 525 (609)
++.++++|++++...
T Consensus 367 i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 367 LEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988653
No 295
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.2e-13 Score=142.50 Aligned_cols=282 Identities=18% Similarity=0.118 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCcE-EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 118 HTTNMVHEASNYIKKCLGGGQEDAM-IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 118 ~~~~~~~e~r~~ia~~~g~~~~~~v-ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
....+..++-.+++.+++++++ .+ .-| +|.++++.+.... ++.+.... ++-++|.++++...|.+...
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~-~~g~~t-~G~Ses~l~~~k~--------~~~~r~~~-k~I~~p~iv~~~~v~~a~eK 185 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSD-SCGCGT-VGGSESGLAAKKS--------YRNRRKAQ-KGIDKPNIVTPQNVHAAFEK 185 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCcc-ccCccc-cccchHHHHHHHH--------HHHHHHhc-cCCCCccccchHHHHHHHHH
Confidence 4678888999999999999865 22 222 3444443322222 23332222 34456789999988888888
Q ss_pred HHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH-hCCeEEEeccccC
Q 038499 197 SWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAASG 274 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~-~g~~vivD~A~~~ 274 (609)
..+..+.+++.|++++ +..+|+..+.+.++ .+|++++.+.++.|+|.+.|+++|.+++-+ +++.+++|++.+.
T Consensus 186 ~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~-----eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~Gg 260 (491)
T KOG1383|consen 186 AARYFEVELREVPLDEGDYRVDPGKVVRMID-----ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGG 260 (491)
T ss_pred HHhhEEEEEEeeeccccceEecHHHHHHHhc-----cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcc
Confidence 8888999999999995 78999999999999 689999999999999999999999999998 9999999998665
Q ss_pred Cccc--------ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC--CCCCccCCCceEeecccccccccc
Q 038499 275 PYVE--------IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS--FPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 275 ~~~~--------id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~--~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
...+ +|++. .++..+..+.||+-..|.|+|+++-+.+-.+-.+ ....+.||-+..+.
T Consensus 261 Fi~p~~~~~~~~fdFr~---p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~T---------- 327 (491)
T KOG1383|consen 261 FINPAGYLNEEEFDFRV---PGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPT---------- 327 (491)
T ss_pred ccccccccCccccccCC---CCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcc----------
Confidence 4442 23322 4778899999999888999898877654411111 12233444331111
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
-...++|. .+++. .+++.- ....|+.+..+++.+.+.++++.+++++++.+++. |.++|.... ..
T Consensus 328 ----lngSR~g~-~va~~-wa~~~~--lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk------p~vs~~~~~-s~ 392 (491)
T KOG1383|consen 328 ----LNGSRPGS-QVAAQ-WAALMS--LGEEGYRENTQNIVETARKLREGIENIKGIKIVGK------PLVSFILFG-SN 392 (491)
T ss_pred ----cccCCccc-HHHHH-HHHHHH--hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC------CcEEEEEcc-CC
Confidence 11122222 22222 222221 24567888888999999999999999999999987 667777766 21
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
.++--++...|. .+|..+.
T Consensus 393 --------------~~~i~elsd~l~-~~GW~ln 411 (491)
T KOG1383|consen 393 --------------DVNIFELSDLLR-KKGWILN 411 (491)
T ss_pred --------------ccchhhhhHHHH-hcCcCcc
Confidence 144556777774 4688776
No 296
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.63 E-value=2.8e-13 Score=151.30 Aligned_cols=328 Identities=15% Similarity=0.099 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WR 199 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~ 199 (609)
....++++..|+.+|++. ..|+-||||.++..++.++ +++|| .|+++...|-|+... +.
T Consensus 174 G~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~---------------~~~Gd--~VLvdRN~HKSv~hgaLi 233 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL---------------LTPGD--LVLFDRNNHKSNHHGALI 233 (720)
T ss_pred hHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHh---------------cCCCC--EEEeecccHHHHHHHHHH
Confidence 458899999999999974 3454599999988887776 48999 799999999999985 88
Q ss_pred HcCceEEEEecCC--C---CCCCHHH-----HHHHHhhhcc----CCC-ceEEEEecccCccccccCHHHHHHH-HHHhC
Q 038499 200 QSLAEVVEIGLDD--D---GLLDIEA-----LRSKLELYKD----AKR-PILGSFSACSNVTGIYSDTRSIARL-LHQYG 263 (609)
Q Consensus 200 ~~G~~vv~v~~~~--~---g~ld~e~-----L~~al~~~~~----~~~-~~lv~~s~~sn~TG~~~dl~~I~~l-a~~~g 263 (609)
..|+.++++.... . |.++.+. ++++|.++.. ..+ .++++++++ |..|++.|++.|+++ +|.++
T Consensus 234 LsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~ 312 (720)
T PRK13578 234 QAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD 312 (720)
T ss_pred HcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC
Confidence 9999999997543 2 3456544 8999876410 113 478888876 567999999999998 68888
Q ss_pred CeEEEeccccCCccccc----CCCC-CCCCcc----EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEee
Q 038499 264 GFACFDFAASGPYVEID----VRSG-QTDGYD----AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYV 334 (609)
Q Consensus 264 ~~vivD~A~~~~~~~id----~~~~-~~~~~D----~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~ 334 (609)
.++||+||++-....+ +.+. ...|+| +++-|.||.+++....++|.++... ++..+ .++
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~--i~g~~---------~~v 380 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH--IKGQA---------RYC 380 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc--ccccc---------ccC
Confidence 9999999875221111 1111 123678 9999999999987777888887655 22100 000
Q ss_pred cccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh-CCCCceEEeCCCCCCC
Q 038499 335 NGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERL-LPNQNIKILGNTSTKR 411 (609)
Q Consensus 335 ~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L-~~~p~i~v~~~~~~~r 411 (609)
++......-......+|+.+-+ +-.+..+. ....|.+ +.+...+++..+++.+ +.+++++++.+.....
T Consensus 381 ------~~~r~~~al~m~qSTSPsY~LmASLDva~~~m-~~~~G~~-l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~ 452 (720)
T PRK13578 381 ------PHKRLNNAFMLHASTSPFYPLFAALDVNAKMH-EGESGRR-LWMECVKLGIEARKLILARCKLIRPFIPPVVDG 452 (720)
T ss_pred ------CHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH-HHhhCHH-HHHHHHHHHHHHHHHHHHhCCCeeecccccccc
Confidence 0000111011223344544332 22222222 1223444 4455666777788877 7778888885421100
Q ss_pred ------------cceEEEEeccCCCCCc-----------CC-----CCCCC---CC----CCCCChHHHHHHHhhhcCcE
Q 038499 412 ------------QAILSFNIHSSTINSS-----------LG-----ENTKT---ET----DKPLHGPFVATLLNDLFGIQ 456 (609)
Q Consensus 412 ------------~~~~~f~~~~~~~~~~-----------~~-----~~~~~---~~----~~~l~~~~v~~~L~~~~GI~ 456 (609)
.-.-+|.+.+ +..+. .+ -.+.+ .. ..++.+..+.+.|.+. ||+
T Consensus 453 ~~~~~~~~~~~~~~~~~w~~~p-~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~-gI~ 530 (720)
T PRK13578 453 KPWQDYPTEQIASDLRFFSFEP-GEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLREN-GIV 530 (720)
T ss_pred cccccCchhhhccccccccccc-CccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHc-CCE
Confidence 0000111111 10000 00 00011 11 2245578888988665 998
Q ss_pred eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 457 ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 457 v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+.- |. ...+-+-++...|++++++++++|.++.+.
T Consensus 531 ~E~---~d------------------------------~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 531 PEK---CD------------------------------LNSILFLLTPAEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred EEe---cC------------------------------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 761 11 244555556668999999999999988664
No 297
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.63 E-value=9.6e-13 Score=141.93 Aligned_cols=348 Identities=17% Similarity=0.143 Sum_probs=195.2
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++... ...+.. ....+...++.+++.+.+..+
T Consensus 24 ~~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~lae~l~~~~~~~ 94 (412)
T TIGR02407 24 AKGSTLWDEDGKE---YIDFFAGAGALNYGHNNPKLKQALIDYLADD-GIIHSL-----DMATEAKREFLETFNEIILKP 94 (412)
T ss_pred cccCEEEeCCCCE---EEEcccchhhccCCCCCHHHHHHHHHHHhhc-cceecc-----ccCcHHHHHHHHHHHHhccCc
Confidence 4556677777753 9998654 667899999999988642 111111 012344556667777764222
Q ss_pred --CCCcEEEe-CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC-----------
Q 038499 138 --QEDAMIFC-GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL----------- 202 (609)
Q Consensus 138 --~~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G----------- 202 (609)
..+.+.|+ .||+.+ +...+++-- .. .| |+.|+.-...||+... +....+
T Consensus 95 ~~~~~~~~f~~~sGseA-~e~AlklAr-------------~~-tg-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 158 (412)
T TIGR02407 95 RGLDYKVQFPGPTGTNA-VESALKLAR-------------KV-TG-RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVP 158 (412)
T ss_pred cCCCceEEEeCCCchHH-HHHHHHHHh-------------hh-cC-CCeEEEECCCcCCchHHHHHhcCCcccccCCCCC
Confidence 11246664 578875 333333211 01 23 2256665555555432 222211
Q ss_pred -ceEEEEecCCCC---CCCHHHHHHHHhhhccC-CCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc
Q 038499 203 -AEVVEIGLDDDG---LLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 203 -~~vv~v~~~~~g---~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~ 273 (609)
..++.+|.+... .-+++.+++.+.++... +++..+++..+.+..|.+.+ +++|.++|++||+++|+|++++
T Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 238 (412)
T TIGR02407 159 LSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA 238 (412)
T ss_pred CCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 133444432210 12467788888642111 25678889999999998644 7789999999999999999976
Q ss_pred C-Ccc----cccCCCCCCCCccEEEEcCCCCCCC-CCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 274 G-PYV----EIDVRSGQTDGYDAIFLSTHKFLGG-PGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 274 ~-~~~----~id~~~~~~~~~D~v~~S~hK~lgg-p~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
+ |.. ..+.... ..|+++++ |++|+ ...+|++++++++ ..+.+...+ ++
T Consensus 239 G~GRtG~~~a~~~~~v---~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~~~~~~-~T----------------- 292 (412)
T TIGR02407 239 GCGRTGTFFSFEPAGI---EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWKPGEHN-GT----------------- 292 (412)
T ss_pred CCCccchhHHhcccCC---CCCEEEec--hhccCCccceeEEEEchhh---hccCCCccC-CC-----------------
Confidence 2 211 1111111 45887765 99985 4458999998875 122211110 00
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL----PNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
..|.|.......+.++.++. .+.+.++.+++.+++.++|+ .++++.. .. .....++++.+.+ .
T Consensus 293 -----~~gnpl~~aaa~a~l~~~i~----~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~-~v--rg~Gl~~~l~l~~-~ 359 (412)
T TIGR02407 293 -----FRGNNLAFVTATAALEYYWS----DDAFEKAVQRKSEIIQERLDRIVAEYPELIK-QV--RGRGLMQGIECGD-G 359 (412)
T ss_pred -----CCccHHHHHHHHHHHHHHhc----ccHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ee--ecceeEEEEEecC-h
Confidence 02333333333455553222 23445555556666655554 3443211 11 0122333444433 1
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
.....+.+.+.+ .||.+.+.. + .++.+|++++
T Consensus 360 ----------------~~~~~~~~~~~~-~Gv~v~~~~----~---------------------------~~~~lr~~p~ 391 (412)
T TIGR02407 360 ----------------DLAGKIAKAAFE-NGLIIETSG----P---------------------------NDEVIKLLPP 391 (412)
T ss_pred ----------------HHHHHHHHHHHH-CCCEEeccC----C---------------------------CCCEEEEECC
Confidence 124567777765 599886310 1 1367999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 038499 504 YYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~ 523 (609)
..+|++|+++++++|+++++
T Consensus 392 l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 392 LTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999875
No 298
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.63 E-value=2.3e-13 Score=151.86 Aligned_cols=318 Identities=15% Similarity=0.091 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR 199 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (609)
+....++++.+|+.+|++. ..|+-||||.++..++.++ +.+|| .|+++...|-|+..++.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~---------------~~~Gd--~VLvdRN~HKSv~haLi 253 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYS---------------APAGS--TVLIDRNCHKSLTHLMM 253 (714)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHh---------------cCCCC--EEEeecccHHHHHHHHH
Confidence 3457899999999999974 3555599999888877765 48999 79999999999999999
Q ss_pred HcCceEEEEecCC--C---CCCC-----HHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 200 QSLAEVVEIGLDD--D---GLLD-----IEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 200 ~~G~~vv~v~~~~--~---g~ld-----~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
..|+.++++.... . |.++ .+.++++|.++....+|+.++++++ |..|++.|++.|+++||.++ ++||
T Consensus 254 lsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvD 330 (714)
T PRK15400 254 MSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFD 330 (714)
T ss_pred HcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEE
Confidence 9999999997543 2 2445 8999999986533334557777776 67899999999999999887 6899
Q ss_pred ccccCCcc--c-c-cCCCCCCCCc---c--EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccc
Q 038499 270 FAASGPYV--E-I-DVRSGQTDGY---D--AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 270 ~A~~~~~~--~-i-d~~~~~~~~~---D--~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
+||++-.. + . +..++. .+. | +++-|.||.+++..-.++|.++..+ +
T Consensus 331 EAwgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v---d--------------------- 385 (714)
T PRK15400 331 SAWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV---N--------------------- 385 (714)
T ss_pred ccchhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCCC---C---------------------
Confidence 99875211 1 1 112221 233 5 8999999999987666666554322 0
Q ss_pred cccccccccccccCCChhH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc------eEEeCCCCCCCc
Q 038499 341 DTLYLEDIEERESGGTPQV--IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN------IKILGNTSTKRQ 412 (609)
Q Consensus 341 ~~~~~~~~~~r~~~gtp~i--~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~------i~v~~~~~~~r~ 412 (609)
+......-......+|+. ++.+-.+.+++ ....| +.+.+...+++..+++.+.++++ ++++.+......
T Consensus 386 -~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m-~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~ 462 (714)
T PRK15400 386 -EETFNEAYMMHTTTSPHYGIVASTETAAAMM-KGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTT 462 (714)
T ss_pred -HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH-Hhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccc
Confidence 000000011122334543 33333333332 11234 44555666777888888887777 777754311000
Q ss_pred ceEEEEeccCCCCCcC---------CCC-------CC--CC----CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 413 AILSFNIHSSTINSSL---------GEN-------TK--TE----TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~---------~~~-------~~--~~----~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
. +|...+ +..+.+ .-+ +. +. .+.++.+..+.+.| +++||.+.- |
T Consensus 463 ~--~w~~~p-~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L-~e~gI~~E~---~------- 528 (714)
T PRK15400 463 E--CWPLRS-DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYL-DEHGIVVEK---T------- 528 (714)
T ss_pred h--hcccCc-cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHH-HHcCCEEEe---c-------
Confidence 0 122111 111100 000 10 11 12467788899998 557998861 1
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
....+=+-++...|++++++++++|.++.+..
T Consensus 529 -----------------------d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~~ 560 (714)
T PRK15400 529 -----------------------GPYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (714)
T ss_pred -----------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 13456666777799999999999999886653
No 299
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.63 E-value=8.2e-13 Score=147.49 Aligned_cols=316 Identities=15% Similarity=0.102 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.+|+.+|++. ..|+-||||.++..++.++ +++|| .|+++...|-|+..++..
T Consensus 195 G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~---------------~~~Gd--~VLvdRN~HKSv~~aLil 254 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYA---------------APAGS--TLLIDRNCHKSLAHLLMM 254 (713)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHh---------------cCCCC--EEEeecccHHHHHHHHHH
Confidence 457889999999999974 3454589999888887765 48999 799999999999999999
Q ss_pred cCceEEEEecCC--C---CCCCH-----HHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeE-EEe
Q 038499 201 SLAEVVEIGLDD--D---GLLDI-----EALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFA-CFD 269 (609)
Q Consensus 201 ~G~~vv~v~~~~--~---g~ld~-----e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~v-ivD 269 (609)
.|+.++++.... . |.++. +.++++|.++....+|+.++++++ +..|++.|++.|+++| |+.+ +||
T Consensus 255 sga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvD 330 (713)
T PRK15399 255 SDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFD 330 (713)
T ss_pred cCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEe
Confidence 999999997543 2 34555 999999987543345678888877 6789999999999999 6766 699
Q ss_pred ccccCCc--cc--ccCCCCCC-CCccEE---EEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccc
Q 038499 270 FAASGPY--VE--IDVRSGQT-DGYDAI---FLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKD 341 (609)
Q Consensus 270 ~A~~~~~--~~--id~~~~~~-~~~D~v---~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (609)
+||++-. .+ .+..++.. .+.|.+ +-|.||.+++....++|.++..+ ..+++
T Consensus 331 EAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v-d~~~~-------------------- 389 (713)
T PRK15399 331 SAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY-DEETF-------------------- 389 (713)
T ss_pred ccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC-CHHHH--------------------
Confidence 9987521 12 11122211 145766 88999999988777888876532 00000
Q ss_pred ccccccccccccCCChhHH--HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc------eEEeCCCCCCCcc
Q 038499 342 TLYLEDIEERESGGTPQVI--QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN------IKILGNTSTKRQA 413 (609)
Q Consensus 342 ~~~~~~~~~r~~~gtp~i~--~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~------i~v~~~~~~~r~~ 413 (609)
...-......+|+.. +.+-.+.+++ ....| +.+.++..+++..+++.+.++.+ ++++.+.......
T Consensus 390 ----n~a~~m~~STSPsY~LmASLD~a~~~m-~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~ 463 (713)
T PRK15399 390 ----NEAFMMHTSTSPSYPIVASVETAAAML-RGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAE 463 (713)
T ss_pred ----HHHHHHHcCCCcHHHHHHHHHHHHHHH-Hhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCcc
Confidence 000111223345433 3333333332 11234 34455666677778888877655 5676542111111
Q ss_pred eEEEEeccCCCCCc-----------CC-----CCCCC--C----CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 414 ILSFNIHSSTINSS-----------LG-----ENTKT--E----TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 414 ~~~f~~~~~~~~~~-----------~~-----~~~~~--~----~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
+|.+.+ +..+. .+ -.+.+ . .+.++++..+.+.| +++||++.- |.
T Consensus 464 --~w~l~p-~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L-~e~gI~~E~---~d------- 529 (713)
T PRK15399 464 --CWPVAP-GEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFL-DERGIVVEK---TG------- 529 (713)
T ss_pred --ceecCC-CcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHH-HHcCCEEEe---cC-------
Confidence 122211 11100 00 00111 1 13367888999998 456998861 11
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
...+=+-++...|++++++++++|.++.+.
T Consensus 530 -----------------------~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 530 -----------------------PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred -----------------------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 245666667778999999999999988654
No 300
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.63 E-value=9.2e-13 Score=135.58 Aligned_cols=401 Identities=13% Similarity=0.090 Sum_probs=247.5
Q ss_pred CCCCCcchHHHHHHHHHhhcc-CCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHH
Q 038499 43 SVPKSISSSEKKLTWLQSQII-GKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTN 121 (609)
Q Consensus 43 ~~~r~~~~~~~~~~~~r~~~~-g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~ 121 (609)
++|-.++..++.++-+.+-+. |. +....|. |.-|-.++-+-+.++.-|...-....|-+. ......++
T Consensus 45 ~aPe~pE~~~~Il~D~ekiI~PGi-tHw~hP~------fhAyfpa~~s~~siladmLs~~i~~vGFtW----~ssPa~TE 113 (511)
T KOG0628|consen 45 KAPEKPESWEDILGDLEKIIMPGI-THWQHPH------FHAYFPAGNSYPSILADMLSGGIGCVGFTW----ASSPACTE 113 (511)
T ss_pred CCCCChhhHHHHHHHHHHHccCCC-cccCCCc------eeeEccCccchHHHHHHHHhccccccccee----ecCcchHH
Confidence 444445556777777776664 32 3333332 334444444445555545433322112111 12334566
Q ss_pred HHHHHHHHHHHHhCCC---------CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC----------Cce
Q 038499 122 MVHEASNYIKKCLGGG---------QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE----------ERW 182 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~---------~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g----------d~~ 182 (609)
+..-.-+|++++++.+ ++.-|+. ++.+.+.+-.++.+.. .....++.+ .+-
T Consensus 114 LE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~---------~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 114 LEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAART---------EKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred HHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHH---------HHHHHhhcCCCcccchhhhhhh
Confidence 6667778888888753 2224555 4777776666655432 122222322 134
Q ss_pred EEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC-ceEEEEecccCccccccCHHHHHHHHHH
Q 038499 183 VVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR-PILGSFSACSNVTGIYSDTRSIARLLHQ 261 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~-~~lv~~s~~sn~TG~~~dl~~I~~la~~ 261 (609)
++.+++..|.|...++...|++++.++.+.+..++.+.|+++|.++...+- |-+++.+-.++.+....++.+|..+|++
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE 263 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh
Confidence 889999999999999999999999999999889999999999998766554 4467777777778888999999999999
Q ss_pred hCCeEEEeccccCCccc-ccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccC--CCCCCccCCCceEeecc
Q 038499 262 YGGFACFDFAASGPYVE-IDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLG--SFPPSTCGGGTVNYVNG 336 (609)
Q Consensus 262 ~g~~vivD~A~~~~~~~-id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~--~~~p~~~ggg~v~~~~~ 336 (609)
+|+|++||+|+++...- ..++.+ +.+.+|.+.+.+|||+..-..+..|++++...... +..|.+.-+....+..
T Consensus 264 ~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~- 342 (511)
T KOG0628|consen 264 EGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAP- 342 (511)
T ss_pred cCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCC-
Confidence 99999999998754321 112211 12467999999999987666788899888741000 1222221111100000
Q ss_pred cccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH---HHHHHHHHHhCCCCceEEeCCCCCCCcc
Q 038499 337 FNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE---TYIERALERLLPNQNIKILGNTSTKRQA 413 (609)
Q Consensus 337 ~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~---~l~~~~~~~L~~~p~i~v~~~~~~~r~~ 413 (609)
.-.|+. -...+|+ ++.-.+......|.+.++++++ ++++.+.+.+.+-+.+++..+ ...+
T Consensus 343 --Dyrhwq-ipl~rRf-----------RSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~---~~lg 405 (511)
T KOG0628|consen 343 --DYRHWQ-IPLGRRF-----------RSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK---RILG 405 (511)
T ss_pred --Cccccc-cccccch-----------hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc---cccc
Confidence 000111 0111222 2222222224456666655544 467777777888889999876 5789
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
.++|+..+ .. ...+.+.+.+++.-.|...+-. +.
T Consensus 406 LvcFRlk~-~N---------------~~ne~Ll~~in~~g~i~l~~~~---------l~--------------------- 439 (511)
T KOG0628|consen 406 LVCFRLKG-DN---------------EINEALLNRLNSSGRIHLVPAS---------LH--------------------- 439 (511)
T ss_pred eeEEeecC-Cc---------------HHHHHHHHHHHhcCcEEEEEee---------ec---------------------
Confidence 99999987 21 2345667777765555554211 10
Q ss_pred CCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhcccc
Q 038499 494 KPGWTRISF-PYYMSNEEFEFTLEALEFIAIYGQRF 528 (609)
Q Consensus 494 ~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~~~~ 528 (609)
..-.+|+.+ +..++++++++..+.|.+.+......
T Consensus 440 gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 440 GKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 135799998 56778889999999999998875544
No 301
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1e-12 Score=142.91 Aligned_cols=359 Identities=15% Similarity=0.111 Sum_probs=199.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++... ...+. +....+...++.++|+++++..
T Consensus 32 ~~G~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~-~~~~~-----~~~~~~~~~~la~~L~~~~~~~ 102 (433)
T PRK08117 32 GEGCYYYGVDGK---EYLDFTSGIAVANVGHRHPKVVQAIKEQADKL-MHGPS-----GVIYYESILKLAEELAEITPGG 102 (433)
T ss_pred eeeeEEEeCCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhc-cCccc-----cccCCHHHHHHHHHHHHhCCCC
Confidence 344555555564 38887654 346788999999988653 11111 1112345677888898888433
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC-------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL-------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~ 204 (609)
. +.+.|+.||+.+....+-.+.. + .|.+.+|.+....|.+........+ ..
T Consensus 103 ~-~~v~f~~SGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~ 166 (433)
T PRK08117 103 L-DCFFFSNSGAEAIEGALKLAKH--------------V-TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS 166 (433)
T ss_pred C-CEEEEeCcHHHHHHHHHHHHHH--------------h-cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC
Confidence 3 3899988898864433322211 1 2222244444444554443322111 11
Q ss_pred EEEEecCCCCC------------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDDDGL------------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~~g~------------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..+|...... -++++|++.+++....+++.+|++..+....|.+.| +++|.++|++||+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~ 246 (433)
T PRK08117 167 VYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIF 246 (433)
T ss_pred cEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 33343321110 156677777753212246778999999999999988 99999999999999999
Q ss_pred eccccCC-ccccc--CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 269 DFAASGP-YVEID--VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 269 D~A~~~~-~~~id--~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
|+++++- ..... ..... -.+|+ .++.|.+|+...+|++++++++ .+.+.....+ ++
T Consensus 247 DEv~tG~gr~G~~~~~~~~g-v~pDi--~t~sK~lg~G~pigav~~~~~i--~~~~~~~~~~-~T--------------- 305 (433)
T PRK08117 247 DEVQTGFGRTGEWFAAQTFG-VVPDI--MTIAKGIASGLPLSAVVASKEL--MEQWPLGSHG-TT--------------- 305 (433)
T ss_pred ecchhccCccccchhHhhcC-CCCCE--eehhhhccCCCcceeEEEcHHH--HhhccCCCCC-CC---------------
Confidence 9998742 11100 01110 12465 4667999865558999999888 3333221110 00
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcce-EEEEeccCC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAI-LSFNIHSST 423 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~-~~f~~~~~~ 423 (609)
..+.|.......++++.. + .+.+.++.+++.+++.+.|.++. ...+... ....+. +.+.+.. +
T Consensus 306 -------~~~np~~~aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~--vrg~Gl~~gi~~~~-~ 370 (433)
T PRK08117 306 -------FGGNPVACAAALATLEVI--K---EEKLLDNANEMGAYALERLEVLKEKHPVIGD--VRGIGLMIGIEIVD-P 370 (433)
T ss_pred -------CCcCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHHHhcCCceee--eecCCcEEEEEEec-C
Confidence 023333333334444433 1 12345566666666666665431 0111111 112222 2333322 1
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
.. .........+.+.+.+ .||.+.+. . + ..+.+|++++
T Consensus 371 ~~----------~~~~~~~~~~~~~l~~-~Gv~~~~~---g-~---------------------------~~~~lRl~p~ 408 (433)
T PRK08117 371 DG----------EPDGDAVEKILDKCLE-KGLLFYLC---G-N---------------------------AGNVLRMIPP 408 (433)
T ss_pred CC----------CcchHHHHHHHHHHHH-CCCEEeec---C-C---------------------------CCCEEEEeCC
Confidence 00 0000123456677755 59877531 0 1 1378999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q 038499 504 YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+|++|+++++++|.++++..
T Consensus 409 ~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 409 LTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987653
No 302
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.61 E-value=2.6e-13 Score=143.70 Aligned_cols=328 Identities=13% Similarity=0.080 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~ 201 (609)
+.++++.+++++|.+ .+++|.+|+. |++.+. .++ ++||| +| ++.+|.....+ ....
T Consensus 73 ~~~lE~~va~~~G~~---~av~v~sGT~-Al~ll~-~l~--------------l~pGD--eV--psn~~f~Tt~ahIe~~ 129 (450)
T TIGR02618 73 FYHLERTVRELYGFK---YVVPTHQGRG-AENLLS-QIA--------------IKPGD--YV--PGNMYFTTTRYHQEKN 129 (450)
T ss_pred HHHHHHHHHHHHCCC---eEEEcCCHHH-HHHHHH-HhC--------------CCCcC--EE--CCceeHHHHHHHHHhC
Confidence 567889999999986 6788866666 677654 333 58999 45 55677555544 5778
Q ss_pred CceEEEEecC----------CCCCCCHHHHHHHHhhhccCCCceEEEEecccCcc-cccc---CHHHHHHHHHHhCCeEE
Q 038499 202 LAEVVEIGLD----------DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVT-GIYS---DTRSIARLLHQYGGFAC 267 (609)
Q Consensus 202 G~~vv~v~~~----------~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~---dl~~I~~la~~~g~~vi 267 (609)
|+..+.++.+ .+|.+|+++|+++|+.. ...+++++.+..++|.. |... ++++|.++|++||+.+|
T Consensus 130 Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~-~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 130 GATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV-GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred CeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc-cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 8876666443 36899999999999842 11245577777777865 7884 47899999999999999
Q ss_pred EeccccCCc-----------ccccCCCC---CCCCccEEEEcCCCCCCCCCCcEEEEEech-hhc-cCCCCCCccCCCce
Q 038499 268 FDFAASGPY-----------VEIDVRSG---QTDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQ-LGSFPPSTCGGGTV 331 (609)
Q Consensus 268 vD~A~~~~~-----------~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~-l~~~~p~~~ggg~v 331 (609)
.|+|+.++. ...++.+. -...+|.+++|.||-.++|.| |+|+++++ ++. .+.....+ + |..
T Consensus 209 ~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~-e-G~~ 285 (450)
T TIGR02618 209 YDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF-E-GMP 285 (450)
T ss_pred EEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc-C-Ccc
Confidence 999987742 11112100 013679999999999999986 88886654 321 11111111 1 110
Q ss_pred EeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCC
Q 038499 332 NYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKR 411 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r 411 (609)
..|.- .+.-.++++.-+.+.+.. ...++.....+++.+.|.+. |+.+..+..
T Consensus 286 ---------------------tyGgl--a~r~~~ala~gL~e~~~~-~y~~~r~~~a~~La~~L~~~-Gvpv~~p~g--- 337 (450)
T TIGR02618 286 ---------------------SYGGL--AGRDMEAMAIGIREAVDY-EYIEHRVKQVRYLGDKLKAA-GVPIVEPVG--- 337 (450)
T ss_pred ---------------------ccCch--hhhhHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHC-CCcccCCCC---
Confidence 01110 110112222222232222 33444455688889999887 888865532
Q ss_pred cceEEEEe----ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHh
Q 038499 412 QAILSFNI----HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQ 487 (609)
Q Consensus 412 ~~~~~f~~----~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~ 487 (609)
++..|.- .| .. ...-.....++..|....||-..- .|..+++.+++..+
T Consensus 338 -gh~V~vda~~~lp-h~-----------~~~~~p~~al~~~ly~~~gir~~e-------~g~~~~~~~~~~~~------- 390 (450)
T TIGR02618 338 -GHAVFLDARRFLP-HI-----------PQDQFPAQSLAASIYVETGVRSME-------RGIVSAGRNNVTGE------- 390 (450)
T ss_pred -cceEEEEhHHhCC-CC-----------ChhhChHHHHHHHHHHHhCccEEe-------ecceecccCCCCCc-------
Confidence 3333331 11 11 011134566777777777875331 11122222211111
Q ss_pred hCCCCCCC--cEEEEecC-CCCCHHHHHHHHHHHHHHHHhcccccCCCccccc
Q 038499 488 KGYVGVKP--GWTRISFP-YYMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIK 537 (609)
Q Consensus 488 ~~~~~~~~--g~iRls~~-~~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~ 537 (609)
-..+ ..+|+.++ ---|.+.+|++.++|..+.++....- -|.|-+.
T Consensus 391 ----~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~-g~~~~~e 438 (450)
T TIGR02618 391 ----HHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIR-GLKMVYE 438 (450)
T ss_pred ----ccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcC-ceEEeec
Confidence 0112 68999985 22378999999999999998765432 4555443
No 303
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.61 E-value=1.1e-12 Score=142.73 Aligned_cols=348 Identities=15% Similarity=0.163 Sum_probs=205.3
Q ss_pred CCC-ccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC
Q 038499 64 GKN-AEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG 136 (609)
Q Consensus 64 g~~-~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~ 136 (609)
+.+ .++.+..|+ -|+|..++ |-..+.|.+++.+++.... +...+ .......++.+.|.+.+..
T Consensus 70 ~~G~~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~---~~~~~----~~~~~~~~lae~L~~~~p~ 139 (459)
T PRK11522 70 AGGLNTLVDTQGQ---EFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP---LHSQE----LLDPLRAMLAKTLAALTPG 139 (459)
T ss_pred ccCeEEEEECCCC---EEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc---ccccc----cCCHHHHHHHHHHHHhCCC
Confidence 445 566666664 38997544 5567899999998886431 11111 1234456677777777654
Q ss_pred CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcCc------------
Q 038499 137 GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSLA------------ 203 (609)
Q Consensus 137 ~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G~------------ 203 (609)
+.+ .+.|+.|||.+ +...+++-- ... -+.| +..|+.....||+... .....+-
T Consensus 140 ~~~-~v~f~~SGsEA-ve~AlklAr-~~t----------~~~g-r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~ 205 (459)
T PRK11522 140 KLK-YSFFCNSGTES-VEAALKLAK-AYQ----------SPRG-KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLP 205 (459)
T ss_pred CCC-EEEEeCCchHH-HHHHHHHHH-HHh----------ccCC-CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCC
Confidence 433 79999888886 333322210 000 0123 2246666656665432 2222221
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhc-cCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYK-DAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYV 277 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~-~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~ 277 (609)
.+..+|. -|++++++++.... ..+++..+++..+....|.+.| ++++.++|++||+++|+|+++.+ |-.
T Consensus 206 ~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 206 GFRHVPF-----GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCcccCC-----CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 1122222 16788888886421 1235678899999999999988 89999999999999999999853 211
Q ss_pred cc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCC--CCccCCCceEeecccccccccccccccccc
Q 038499 278 EI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFP--PSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 278 ~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~--p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.- -....+ -.+|++++ .|.+||. ..+|.+++++++. +.+. +...+ + -
T Consensus 281 G~~~a~e~~g-v~PDivt~--gK~lggG~~Pigav~~~~~i~--~~~~~~~~~~~-~----------------------T 332 (459)
T PRK11522 281 GKMFACEHEN-VQPDILCL--AKALGGGVMPIGATIATEEVF--SVLFDNPFLHT-T----------------------T 332 (459)
T ss_pred chhhhhhccC-CCCCEEEe--chhhhCCCccceeEEEcHHHH--HHhccCCcccC-C----------------------C
Confidence 10 011110 13588765 5999874 2478888888873 2221 11000 0 0
Q ss_pred cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----Cc-e-EEeCCCCCCCcceEEEEeccCCCCC
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QN-I-KILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~-i-~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
..|.|...+...+.++... .+.+.++.+++.+++.+.|+++ |. + ++-+ +..++.+.+.. .
T Consensus 333 ~~gnp~~~Aaala~L~~i~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG-----~Gl~~giel~~-~--- 398 (459)
T PRK11522 333 FGGNPLACAAALATINVLL-----EQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARG-----KGMLMAIEFVD-N--- 398 (459)
T ss_pred CCCCHHHHHHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEe-----ceeEEEEEecC-c---
Confidence 1234444444455555442 2345667777777777777653 31 1 2222 23444454443 1
Q ss_pred cCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 427 SLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
.....+.+.|.+ .||.+.+.. + ....+|+.++..+
T Consensus 399 -------------~~~~~i~~~l~~-~Gvl~~~~~----~---------------------------~~~~lr~~Ppl~~ 433 (459)
T PRK11522 399 -------------EIGYNFASEMFR-QRVLVAGTL----N---------------------------NAKTIRIEPPLTL 433 (459)
T ss_pred -------------hHHHHHHHHHHH-CCeEEEecC----C---------------------------CCCEEEEECCccC
Confidence 124567777766 599886210 0 1368999999999
Q ss_pred CHHHHHHHHHHHHHHHHhccc
Q 038499 507 SNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 507 t~eeid~ll~al~~v~~~~~~ 527 (609)
|++|+++++++++++++...+
T Consensus 434 t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 434 TIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876543
No 304
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.61 E-value=2.1e-12 Score=139.72 Aligned_cols=339 Identities=15% Similarity=0.144 Sum_probs=196.9
Q ss_pred ccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 038499 67 AEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED 140 (609)
Q Consensus 67 ~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~ 140 (609)
.++.+..|+ .|+|..++ |-..+.|.+++.+++.... .++. + ...+...++.+.+.+.+....+
T Consensus 67 ~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~--~~~~-~----~~~~~~~~lAe~L~~~~p~~~~- 135 (442)
T TIGR03372 67 NTLIDTQGN---EFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQP--LHSQ-E----LLDPLRALLAKTLAALTPGKLK- 135 (442)
T ss_pred eEEEECCCC---EEEECCccHHhhhcCCCCHHHHHHHHHHHHhCC--Cccc-c----cCCHHHHHHHHHHHHhCCCCcC-
Confidence 456566664 49997544 5667899999999886542 1111 1 1134456677777777754433
Q ss_pred cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------ceEEE
Q 038499 141 AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------AEVVE 207 (609)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~~vv~ 207 (609)
.+.|+.|||.+ +...+++--. . .-+.| +..|++....||... ..+...+ ..+..
T Consensus 136 ~v~f~~SGsEA-~e~AlklAr~-~----------t~~~g-r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~ 202 (442)
T TIGR03372 136 YSFFCNSGTES-VEAALKLAKA-Y----------QSPRG-KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHH 202 (442)
T ss_pred EEEEeCCchHH-HHHHHHHHHH-H----------HhhcC-CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEE
Confidence 78999888886 3333222100 0 00123 235666666566543 2222211 11233
Q ss_pred EecCCCCCCCHHHHHHHHhhhc-cCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccccc--
Q 038499 208 IGLDDDGLLDIEALRSKLELYK-DAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEI-- 279 (609)
Q Consensus 208 v~~~~~g~ld~e~L~~al~~~~-~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~i-- 279 (609)
+|.+ |++++++.+++.. ..+++..+++..+....|.+.| +++|.++|++||+++|+|+++.+ |-..-
T Consensus 203 ~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~ 277 (442)
T TIGR03372 203 VAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF 277 (442)
T ss_pred eCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch
Confidence 4332 6778877775311 1245778889999988999988 89999999999999999999853 22111
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCC--CCccCCCceEeecccccccccccccccccccCCC
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFP--PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~--p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
-..... -.+|++++ .|.+||. ..+|.+++++++ .+.+. +...++ -..|.
T Consensus 278 a~e~~g-v~PDivt~--gK~lg~G~~Pigavv~~~~i--~~~~~~~~~~~~~-----------------------T~~gn 329 (442)
T TIGR03372 278 ACEHEG-VQPDILCL--AKALGGGVMPIGATIATEAV--FSVLFDNPFLHTT-----------------------TFGGN 329 (442)
T ss_pred hhhhcC-CCCCeeee--hhhhcCCcccceEEEecHHH--HHhhhccCccccC-----------------------CCCCC
Confidence 011110 13588775 5999864 247888888887 33321 111000 01344
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CC-ce-EEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQ-NI-KILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p-~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
|--.+...+.++.. +. +.+.++.+++.+++++.|++ .| .+ ++-+ +..++.+.+.. +
T Consensus 330 p~~~Aaa~a~L~~i--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG-----~Gl~~giel~~-~------- 391 (442)
T TIGR03372 330 PLACAAALATINEL--LE---KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARG-----KGLLMAIEFRD-N------- 391 (442)
T ss_pred HHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec-----ceEEEEEEeCC-h-------
Confidence 44444445555554 22 23445555556666655543 33 21 2322 23444444433 1
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
.....+.+.|.+ .||.+... . + .+..+|+.++..+|++|
T Consensus 392 ---------~~~~~i~~~l~~-~Gvl~~~~---~-~---------------------------~~~~lr~~Ppl~~t~~~ 430 (442)
T TIGR03372 392 ---------EIGYAFAKELFQ-QNILVAGT---L-N---------------------------NAKSIRIEPPLTITIEQ 430 (442)
T ss_pred ---------HHHHHHHHHHHH-CCcEEeec---C-C---------------------------CCCEEEEECCcccCHHH
Confidence 124567777866 59988621 0 1 13689999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 511 FEFTLEALEFI 521 (609)
Q Consensus 511 id~ll~al~~v 521 (609)
++++++++++.
T Consensus 431 id~~~~~l~~~ 441 (442)
T TIGR03372 431 CALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 305
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=4.8e-13 Score=142.07 Aligned_cols=327 Identities=14% Similarity=0.082 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~ 201 (609)
+.++++.+++++|.+ .+++|.||+. |++.+ ..++ +++|| +| ++.+|.....+ ....
T Consensus 80 ~~~LE~~vAe~lG~e---~aV~v~sGTa-Al~ll-~~l~--------------v~pGd--~V--p~n~~f~Tt~ahI~~~ 136 (460)
T PRK13237 80 FYHLEETVQEYYGFK---HVVPTHQGRG-AENLL-SRIA--------------IKPGQ--YV--PGNMYFTTTRYHQELN 136 (460)
T ss_pred HHHHHHHHHHHHCCC---eEEEeCCHHH-HHHHH-HHhC--------------CCCcC--EE--CCccchHhhHHHHHhC
Confidence 567889999999996 5788867776 46654 3343 57898 43 66667665555 5667
Q ss_pred CceEEEEec----------CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcc-cccc---CHHHHHHHHHHhCCeEE
Q 038499 202 LAEVVEIGL----------DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVT-GIYS---DTRSIARLLHQYGGFAC 267 (609)
Q Consensus 202 G~~vv~v~~----------~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~---dl~~I~~la~~~g~~vi 267 (609)
|+..+-+.. ..+|.+|+++|+++|++. ...++.++.+..++|.. |... ++++|.++|++||+.+|
T Consensus 137 Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~-~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 137 GGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV-GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred CcEEEeeecccccccccCCCCCCCcCHHHHHHHhccc-cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 885554431 236899999999999842 12355677777778887 6665 67999999999999999
Q ss_pred EeccccCCcc-----------cccCC----CCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh-c-cCCCCCCccCCCc
Q 038499 268 FDFAASGPYV-----------EIDVR----SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY-Q-LGSFPPSTCGGGT 330 (609)
Q Consensus 268 vD~A~~~~~~-----------~id~~----~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~-~-l~~~~p~~~ggg~ 330 (609)
.|+|++.+.. ...+. +. ....|.+++|+||.++++.| |+++++++-. + ++.+...+.|--+
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~-~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG~~t 293 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEM-FSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEGMPS 293 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhc-cCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCCCcC
Confidence 9999887622 11111 00 12579999999999998875 8888886542 1 1112112111100
Q ss_pred eEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCC
Q 038499 331 VNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTK 410 (609)
Q Consensus 331 v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~ 410 (609)
.|.. .+--.++++.-+.+....+.+ ++.....+++.+.|.+. |+.|..|.
T Consensus 294 -----------------------ygg~--~grd~~alAvgl~E~~~~~y~-~~ri~~~~~l~~~L~~~-Gvpv~~p~--- 343 (460)
T PRK13237 294 -----------------------YGGM--AGRDMEAMAIGIEESVQYEYI-EHRVGQVRYLGEKLLAA-GVPIVEPV--- 343 (460)
T ss_pred -----------------------CCCh--hhhHHHHHHhHHHhhchHHHH-HHHHHHHHHHHHHHHHC-CCceecCC---
Confidence 1111 010012222222233333333 34445678888888775 88888763
Q ss_pred CcceEEEEe----ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec-cCcccCChhhhhhcCCChhHHHHHHHH
Q 038499 411 RQAILSFNI----HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR-GGCACAGPYGHHLLDLDEAQSYQIRSA 485 (609)
Q Consensus 411 r~~~~~f~~----~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~-~G~~ca~p~~~~ll~i~~~~~~~~~~~ 485 (609)
.++-.|+- .| .. ...-.....++..|....||-.. -|. .+++.+++..+
T Consensus 344 -ggH~v~vda~~~lp-h~-----------~~~~~p~~al~~~ly~~~GiR~~e~g~--------~~~~~~~~~~~----- 397 (460)
T PRK13237 344 -GGHAVFLDARRFLP-HL-----------PQDQFPAQALAAELYIESGVRSMERGI--------VSAGRDPKTGE----- 397 (460)
T ss_pred -CceEEEEEhHHhCC-CC-----------CcccChHHHHHHHHHHHhCcCeEeecc--------eecccCCCCCc-----
Confidence 23333331 11 10 01113456777777777787532 122 22222211111
Q ss_pred HhhCCCCCCC--cEEEEecC-CCCCHHHHHHHHHHHHHHHHhcccccCCCcccccC
Q 038499 486 IQKGYVGVKP--GWTRISFP-YYMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKT 538 (609)
Q Consensus 486 ~~~~~~~~~~--g~iRls~~-~~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~~ 538 (609)
-..+ ..+|+.++ ---|.+.+|++.++|..+.++.... +-|.|-+..
T Consensus 398 ------~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~-~g~~~~~ep 446 (460)
T PRK13237 398 ------NHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHREDI-RGLRFVYEP 446 (460)
T ss_pred ------cCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhhc-CCeEEeecC
Confidence 0112 68999985 2238899999999999999876543 345554443
No 306
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.60 E-value=3.6e-12 Score=138.04 Aligned_cols=356 Identities=16% Similarity=0.107 Sum_probs=192.2
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+++.++.+..|+ -|+|..++ |-..+.|.+++.+++.... ..+. .........++.+.|.+.+...
T Consensus 22 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~ 92 (420)
T TIGR00700 22 AEGAILEDVDGN---RLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT-HTCF-----MVTPYEGYVALAEKLNRIAPGS 92 (420)
T ss_pred eeeeEEEeCCCC---EEEECccCHHhccCCCCCHHHHHHHHHHHHhcc-Cccc-----cccCChHHHHHHHHHHHhCCCC
Confidence 455666666665 38997654 5667899999998886531 1111 0011233455666777776532
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G-------------~ 203 (609)
..+.+.|+.+||++ +...+++-- .. .|.+ .|+.-...||+.. .+....+ -
T Consensus 93 ~~~~v~f~~sGseA-~e~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 156 (420)
T TIGR00700 93 GPKKSVFFNSGAEA-VENAVKIAR-------------SY-TGRP-GVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAP 156 (420)
T ss_pred CCCEEEEeCCcHHH-HHHHHHHHH-------------Hh-cCCC-cEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCC
Confidence 22379999888885 333333210 01 2322 4555555555443 2222111 1
Q ss_pred eEEEEecCCCC-------CC----CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 204 EVVEIGLDDDG-------LL----DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 204 ~vv~v~~~~~g-------~l----d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
.+..++..... .. +++++++.+......+++..+++..+...+|.+.+ +++|.++|++||+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~ 236 (420)
T TIGR00700 157 EVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIA 236 (420)
T ss_pred CcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 22333332100 01 25567776631112256778999999999999877 78899999999999999
Q ss_pred eccccCC-ccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 269 DFAASGP-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 269 D~A~~~~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
|+++..- ... ..+... .-..|+++ +.|.+++...+|++++++++ .+.+.+...+ .+
T Consensus 237 DEV~tg~gr~g~~~a~~~~-~~~pDi~~--lsK~l~~G~pig~v~~~~~i--~~~~~~~~~~-~T--------------- 295 (420)
T TIGR00700 237 DEVQTGFARTGAMFACEHE-GPEPDLIT--TAKSLADGLPLSGVTGRAEI--MDAPAPGGLG-GT--------------- 295 (420)
T ss_pred EecccCCcccchhHHHhhc-CCCCCEEE--eeccccCCcceEEEEecHHH--HhhcCCCCcC-CC---------------
Confidence 9997642 221 111111 01357665 56999865668999999988 4444322111 00
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh----CCCCceEEeCCCCCCCcceEEEEecc
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL----LPNQNIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L----~~~p~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
..+.|-......+++++. +..+ +.++.+++.+++.+.| ..+|.+.-+.. ...++.+.+..
T Consensus 296 -------~~~~pl~~aaa~a~l~~l--~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg----~G~~~~i~~~~ 359 (420)
T TIGR00700 296 -------YAGNPLACAAALAVLAII--ESEG---LIERARQIGRLVTDRLTTLKAVDPRIGDVRG----LGAMIAVELVD 359 (420)
T ss_pred -------CCcCHHHHHHHHHHHHHH--Hhcc---HHHHHHHHHHHHHHHHHHHHhhCCCEEEeec----cceEEEEEEec
Confidence 123332223333444443 2222 3334444444444444 33444322222 23344443322
Q ss_pred CCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEe
Q 038499 422 STINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls 501 (609)
.... .........+.+.+.+ .||.+.++..+ .+++||+
T Consensus 360 -~~~~---------~~~~~~~~~l~~~~~~-~Gv~i~p~~~f-------------------------------~~~lRl~ 397 (420)
T TIGR00700 360 -PGTT---------EPDAGLAERIATAAHA-AGLLLLTCGMF-------------------------------GNIIRFL 397 (420)
T ss_pred -CCCC---------CccHHHHHHHHHHHHH-CCeEEeccCCC-------------------------------CCEEEEE
Confidence 1000 0000013345555544 69998754211 2689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q 038499 502 FPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 502 ~~~~~t~eeid~ll~al~~v~~ 523 (609)
++...+++++++++++|.+++.
T Consensus 398 p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 398 PPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCCcCHHHHHHHHHHHHHHhh
Confidence 9877899999999999998763
No 307
>PRK06541 hypothetical protein; Provisional
Probab=99.60 E-value=1.6e-12 Score=141.82 Aligned_cols=373 Identities=13% Similarity=0.072 Sum_probs=200.2
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... +... .+ ...+...++.+.+.+.+..+
T Consensus 41 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~---~~~~--~~-~~~~~~~~la~~l~~~~p~~ 111 (460)
T PRK06541 41 GEGCYIWDDRGKR---YLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA---FFPL--WS-YAHPPAIELAERLAALAPGD 111 (460)
T ss_pred CcccEEEeCCCCE---EEECCccHHhccCCCCCHHHHHHHHHHHhhCc---Cccc--cc-cCCHHHHHHHHHHHHhCCCC
Confidence 5566677776753 8997654 5667899999998886431 1100 01 11234556677777776543
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~ 203 (609)
-+ .+.|+.||+.+ +...+++ .... + ..=+++ +..|+.-...||+.. ......| .
T Consensus 112 ~~-~v~f~~sGseA-ve~AlklAr~~~-----~----~~g~~~-r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 179 (460)
T PRK06541 112 LN-RVFFTTGGSEA-VESAWKLAKQYF-----K----LTGKPG-KHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVP 179 (460)
T ss_pred cC-EEEEcCCcHHH-HHHHHHHHHHHH-----H----hcCCCC-ccEEEEEcCcccCcchhhhcCcCChhhccccCCCCC
Confidence 33 89999888886 3322222 1100 0 000122 224555554555433 2221111 1
Q ss_pred eEEEEecCCCC-----CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeE
Q 038499 204 EVVEIGLDDDG-----LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFA 266 (609)
Q Consensus 204 ~vv~v~~~~~g-----~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~v 266 (609)
.+..++..... .-+ ++.+++.+.+. ..+++.+++++.+++..|.+.+ +++|.++|++||+++
T Consensus 180 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~ll 258 (460)
T PRK06541 180 GGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE-GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLL 258 (460)
T ss_pred CcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 23334322110 012 36677777531 1135668888888999999988 899999999999999
Q ss_pred EEeccc-cCCccccc--CCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 267 CFDFAA-SGPYVEID--VRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 267 ivD~A~-~~~~~~id--~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
|+|+++ ++|-..-- ....+ -..|++++ .|.++|.. .+|.+++++++. +.+.+.. +...
T Consensus 259 I~DEV~tGfGR~G~~~a~~~~g-v~PDivt~--gK~l~~G~~pigav~~~~~i~--~~~~~~~-~~~~------------ 320 (460)
T PRK06541 259 VSDEVICAFGRLGEMFGCERFG-YVPDIITC--AKGITSGYSPLGAMIASDRLF--EPFLDGP-TMFL------------ 320 (460)
T ss_pred EEechhhCCCcCchhhhhhhcC-CCCCEEEe--cccccCCccceeEEEEcHHHH--HHhhcCC-Cccc------------
Confidence 999998 44422111 11110 13587764 69998643 479999998883 3332110 0000
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccC
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
...-..|.|...+...+.+..+ + .+.+.++.+++.+++.+.|+++....+++.. .....++.+.+..
T Consensus 321 ------~~~T~~gnp~~~aaala~l~~l--~---~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-rg~Gl~~~ie~~~- 387 (460)
T PRK06541 321 ------HGYTFGGHPVSAAVALANLDIF--E---REGLLDHVRDNEPAFRATLEKLLDLPIVGDV-RGDGYFYGIELVK- 387 (460)
T ss_pred ------cCCCCCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHhhcCCCeEEE-EecceEEEEEEec-
Confidence 0000123333333334444433 1 2245567777777777777654221111110 0122344444322
Q ss_pred CCCCcCCCCCCCCCCC---CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 423 TINSSLGENTKTETDK---PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~---~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
+.... .+.... ......+.+.|.+ .||.+.+. +. ....+|
T Consensus 388 ~~~~~-----~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-----~~--------------------------g~~~lr 430 (460)
T PRK06541 388 DKATK-----ETFTDDESERLLRGFLSPALFE-AGLYCRAD-----DR--------------------------GDPVVQ 430 (460)
T ss_pred Ccccc-----cCCcchhhhhhHHHHHHHHHHh-CCeEEEec-----CC--------------------------CCCEEE
Confidence 10000 000000 0011245666766 59988731 00 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
|+++..+|++|+++++++|++++...+
T Consensus 431 l~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 431 LAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987654
No 308
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=4.9e-12 Score=137.42 Aligned_cols=358 Identities=15% Similarity=0.057 Sum_probs=197.2
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++..... .+. ...+.....++.+.|.+.++..
T Consensus 30 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~-----~~~~~~~~~~la~~L~~~~p~~ 100 (443)
T PRK08360 30 AENAKVWDIEGN---EYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH-YTP-----IYGFPVEPLLLAEKLIEIAPGD 100 (443)
T ss_pred cceeEEEECCCC---EEEEccccHhhcccCCCCHHHHHHHHHHHHhccC-ccc-----cccCcHHHHHHHHHHHHhCCCC
Confidence 445556666664 38997654 55678999999988865311 111 0111234556777788887654
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcCc------------e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSLA------------E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G~------------~ 204 (609)
-+ .|.|+.|||.+ +...+++-- .. .|.+ .|+.-...||+. ..++...+. .
T Consensus 101 ~~-~v~f~~sGsEA-ve~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 163 (443)
T PRK08360 101 NP-KVSFGLSGSDA-NDGAIKFAR-------------AY-TKRR-KILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSD 163 (443)
T ss_pred CC-EEEEcCCHHHH-HHHHHHHHH-------------Hh-cCCC-eEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCC
Confidence 33 79999888886 333333210 01 2222 455555444443 333322221 2
Q ss_pred EEEEecCCCCC------------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDDDGL------------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~~g~------------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..++...... -+++.+++.+.+....+++..++++..+|++|.+.+ +++|.++|++||+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 243 (443)
T PRK08360 164 VHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVV 243 (443)
T ss_pred cEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 33444322100 134556666653222257889999988899999876 77899999999999999
Q ss_pred eccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 269 DFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 269 D~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
|+++.. +...- ...... ...|++++ .|.+++...+|++++++++ .+.+.....+ .
T Consensus 244 DEv~~g~gr~G~~~a~~~~~-~~pDiitl--sK~l~~G~pigav~~~~~i--~~~~~~~~~~-~---------------- 301 (443)
T PRK08360 244 DEVQSGLGRTGKWFAIEHFG-VEPDIITL--GKPLGGGLPISATIGRAEI--MDSLPPLAHA-F---------------- 301 (443)
T ss_pred eccccCCCcCccchhhhhcC-CCCCEEEe--cccccCCceeEEEEEcHHH--HhhhcCCCCC-C----------------
Confidence 999763 22211 000110 13577755 7999854458999999887 3343221000 0
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEeccCCC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
...+.|.....+.+++..+.. +.+.++.+++.+++++.|+++. ...+++.. ..+..++.+.+.. +.
T Consensus 302 ------T~~~~p~~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rg~Gl~~gie~~~-~~ 368 (443)
T PRK08360 302 ------TLSGNPVASAAALAVIEEIEE-----KNLLKRAEKLGNYTKKRLEEMKKKHELIGDV-RGIGLMIGVDLVK-DR 368 (443)
T ss_pred ------CCCcCHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEEEec-CC
Confidence 012333333333444444321 2345566666666666654320 11111111 1122333333322 10
Q ss_pred CCcCCCCCCCCCCC-CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 425 NSSLGENTKTETDK-PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 425 ~~~~~~~~~~~~~~-~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
. .+.. .-....+...|.+ .||.+... ....+|++++
T Consensus 369 ~---------~~~~~~~~~~~~~~~l~~-~Gi~~~~~---------------------------------~~~~lr~~P~ 405 (443)
T PRK08360 369 E---------TKERAYEEAAKVVWRAWE-LGLIVTFF---------------------------------SGNVLRIQPP 405 (443)
T ss_pred c---------ccCccHHHHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEeCC
Confidence 0 0000 0113456666755 59887521 1367999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q 038499 504 YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+|++|++++++++++++...
T Consensus 406 l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 406 LTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 309
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.59 E-value=3.7e-12 Score=136.97 Aligned_cols=349 Identities=14% Similarity=0.115 Sum_probs=191.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... +.... ..++...++.++|.+..+..
T Consensus 29 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~----~~~~~~~~la~~L~~~~~~~ 98 (408)
T PRK04612 29 GQGSRVWDDQGRE---YLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW---HTSNV----FYSAPPLKLAEELVTASRFA 98 (408)
T ss_pred eeeCEEEECCCCE---EEEcCccHhhccCCCCCHHHHHHHHHHHHhcc---ccccc----cCCHHHHHHHHHHHhhCCCC
Confidence 5566677777753 8997644 5667899999998886531 11100 11233445666676665432
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA------------ 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~------------ 203 (609)
+.+.|+.||+++. ...+++ .... . ..=++..+..|+.-...||+.. ..+...+-
T Consensus 99 --~~v~f~~sGseA~-e~AlklAr~~~------~---~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 166 (408)
T PRK04612 99 --EKVFLCNSGTEAN-EAAIKLVRKWA------S---SQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPG 166 (408)
T ss_pred --CEEEEcCchHHHH-HHHHHHHHHHH------H---hhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCC
Confidence 4899998888863 322222 1100 0 0001112335666555555543 33322221
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc-cC----HHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY-SD----TRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~-~d----l~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
.+..++. -|++++++++.. +++.++++. |.+.+|-+ .+ +++|.++|++||+++|+|+++++-...
T Consensus 167 ~~~~~~~-----~d~~~l~~~~~~----~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 236 (408)
T PRK04612 167 GFRYVDF-----NDVEALEAAMAG----GDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT 236 (408)
T ss_pred CceEcCC-----CCHHHHHHhhCC----CCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 1122222 278999988862 344555555 45555544 32 788999999999999999997632111
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
-.+-.....++...+.++.|.+|+...+|++++++++ .+.+.....+ . ...+.|.
T Consensus 237 G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~--~~~~~~~~~~-~----------------------t~~~~p~ 291 (408)
T PRK04612 237 GTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKV--AETMQFGAHG-T----------------------TFGGNPL 291 (408)
T ss_pred CchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHH--HhhhcCCCcC-C----------------------CCCCCHH
Confidence 1111100113333344556999865568999988877 3333221100 0 0123333
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
...++.+.+... + .+.+.++.+++.+++.+.|+++. ...+++.. ..+..++.+.+.+ ..
T Consensus 292 ~~aaa~a~L~~~--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~v-rg~Gl~~~i~~~~-~~------------- 351 (408)
T PRK04612 292 AAAVARVALRKL--A---SPQIAANVARQSAALRAGLEALNAEFGVFAQV-RGRGLMLGAVLAP-AH------------- 351 (408)
T ss_pred HHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHHHhhCCCeeee-eccceEEEEEecC-ch-------------
Confidence 334444444443 2 23456667777777777765431 11122111 0122333443332 10
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
.-....+.+.+.+ .||.+.+. .++.+|+.+++..|++|+++++++
T Consensus 352 -~~~a~~i~~~l~~-~Gvlv~~~---------------------------------g~~~lRl~Ppl~it~eeid~~l~~ 396 (408)
T PRK04612 352 -AGQAGAILDLAAE-HGLLLLQA---------------------------------GPDVLRFVPALNLTDAELADGLAR 396 (408)
T ss_pred -hhHHHHHHHHHHH-CCeEEeeC---------------------------------CCCEEEEcCCccCCHHHHHHHHHH
Confidence 0124567777765 59988621 136899999999999999999999
Q ss_pred HHHHHHh
Q 038499 518 LEFIAIY 524 (609)
Q Consensus 518 l~~v~~~ 524 (609)
|++++..
T Consensus 397 l~~~l~~ 403 (408)
T PRK04612 397 LRLALAD 403 (408)
T ss_pred HHHHHHH
Confidence 9998865
No 310
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.58 E-value=4.3e-12 Score=137.70 Aligned_cols=357 Identities=12% Similarity=0.073 Sum_probs=188.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-.++.|.+++.+++... ...... ... .....++.+.+.+..+.+
T Consensus 30 ~~G~~l~d~dG~---~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~-~~~~~~--~~~---~~~~~~la~~l~~~~~~~ 100 (425)
T PRK08088 30 AENCRVWDVEGR---EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKL-SHTCFQ--VLA---YEPYLELCEKMNQKVPGD 100 (425)
T ss_pred eeeCEEEeCCCC---EEEEcCCchhhcCCCCCCHHHHHHHHHHHhhC-CCcccc--ccC---CHHHHHHHHHHHHhCCCC
Confidence 334445455553 48887654 556888999998888653 111110 000 122346666777777654
Q ss_pred CCCcEEEeCChHHH---HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc-----------
Q 038499 138 QEDAMIFCGSGTTA---AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA----------- 203 (609)
Q Consensus 138 ~~~~vift~sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~----------- 203 (609)
..+.++|+.||+++ |++++... .++++ +|.+.+..|..........+-
T Consensus 101 ~~~~~~f~~sGsea~e~Alklar~~----------------~~r~~--iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 101 FAKKTLLVTTGSEAVENAVKIARAA----------------TKRSG--VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHH----------------hCCCe--EEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 32378888899984 44442211 12233 555554444444333322110
Q ss_pred --eEEE--EecCCCCCCC----HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecc
Q 038499 204 --EVVE--IGLDDDGLLD----IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 204 --~vv~--v~~~~~g~ld----~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A 271 (609)
.+.. +|.+.++ ++ +++|++.+....+.+++.++++.......|.+.+ +++|.++|++||+++|+|++
T Consensus 163 ~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev 241 (425)
T PRK08088 163 PGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEV 241 (425)
T ss_pred CCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 0111 2222221 22 5568887752112246778888877777787766 78899999999999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
++.....-.+......+.+.-+.|++|.+++...+|++++++++ ++.+..... .
T Consensus 242 ~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~--~~~~~~~~~------------------------~ 295 (425)
T PRK08088 242 QTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEV--MDAIAPGGL------------------------G 295 (425)
T ss_pred ccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHH--HhhcCCCCC------------------------C
Confidence 77421111111110012222246667999855568999999888 444432110 0
Q ss_pred ccCCChhHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh----CCCCceEEeCCCCCCCcceEEEEeccCCCCC
Q 038499 352 ESGGTPQVIQM-IRAALAFWVKEYIGHEVIKKQEETYIERALERL----LPNQNIKILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 352 ~~~gtp~i~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L----~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
...+.+.+.+. +.+.+... ..+.+.++.+++.+++.+.| ...|.+.-+.. ...++++.+.. +...
T Consensus 296 ~t~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g----~G~~~~l~l~~-~~~~ 365 (425)
T PRK08088 296 GTYAGNPIACAAALAVLKVF-----EQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG----LGAMIAIELFE-DGDH 365 (425)
T ss_pred CCCCcCHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec----cceEEEEEEec-CCCC
Confidence 11122233222 22222221 12233333344444444433 33444322211 13344444422 1100
Q ss_pred cCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 427 SLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
..........+.+.+.+ .||.+.++.. .++.+|++++..+
T Consensus 366 --------~~p~~~~~~~l~~~~~~-~Gv~~~~~~~-------------------------------~~~~iRl~~~~~~ 405 (425)
T PRK08088 366 --------SKPNAKLTAQIVARARD-KGLILLSCGP-------------------------------YYNVLRILVPLTI 405 (425)
T ss_pred --------CCCCHHHHHHHHHHHHh-CCCEEecCCC-------------------------------CCCEEEEECCCCc
Confidence 00001224567777765 5988763211 1378999999899
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 038499 507 SNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 507 t~eeid~ll~al~~v~~~ 524 (609)
|++|++..+++|+++++.
T Consensus 406 t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 406 EDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 311
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.58 E-value=4.1e-12 Score=137.42 Aligned_cols=356 Identities=15% Similarity=0.146 Sum_probs=196.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++... ..++. .....+...++.+.+.+.....
T Consensus 29 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~-----~~~~~~~~~~la~~l~~~~p~~ 99 (421)
T PRK09792 29 AENATLKDVEGN---EYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQF-THTAY-----QIVPYESYVTLAEKINALAPVS 99 (421)
T ss_pred ccccEEEeCCCC---EEEEccCchhhhcCCCCCHHHHHHHHHHHHhc-cCccc-----CccCCHHHHHHHHHHHHhCCCC
Confidence 455666666665 38998654 667889999999888653 11111 1111233455666677776532
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G-------------~ 203 (609)
..+.+.|+.||+.+ +...+++.- .. .|. +.|+.-...||+... .....+ .
T Consensus 100 ~~~~~~f~~sGseA-~e~AlklAr-------------~~-tgr-~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~ 163 (421)
T PRK09792 100 GQAKTAFFTTGAEA-VENAVKIAR-------------AH-TGR-PGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPG 163 (421)
T ss_pred CCceEEEeCChHHH-HHHHHHHHH-------------Hh-cCC-CeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCC
Confidence 22378898888886 333322210 01 232 256665555555432 221111 1
Q ss_pred eEEEEecCC--CCC---CCHHHHHHHHhhhccCCCceEEEEecccCcccccc-C---HHHHHHHHHHhCCeEEEeccccC
Q 038499 204 EVVEIGLDD--DGL---LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS-D---TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 204 ~vv~v~~~~--~g~---ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~-d---l~~I~~la~~~g~~vivD~A~~~ 274 (609)
.+..++... ++. -+++++++.+.+....+++.+++++..++++|... | +++|.++|++||+++|+|+++..
T Consensus 164 ~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg 243 (421)
T PRK09792 164 SVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG 243 (421)
T ss_pred CcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 133344322 211 13477787776311124678999999999999875 6 78899999999999999999764
Q ss_pred C-ccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 275 P-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 275 ~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
- ... ..+... ....|+++ +.|.+++...+|++++++++ .+.+.+...+ +
T Consensus 244 ~gr~G~~~a~~~~-~~~pDi~t--~gK~l~~G~pigav~~~~~i--~~~~~~~~~~-~---------------------- 295 (421)
T PRK09792 244 FARTGKLFAMDHY-ADKPDLMT--MAKSLAGGMPLSGVVGNANI--MDAPAPGGLG-G---------------------- 295 (421)
T ss_pred CCCCCchhHHHhc-CCCCcEEE--eehhhcCCCceEEEEEcHHH--HhccCCCCcC-C----------------------
Confidence 2 211 111111 12457654 46999866668999999888 3343221110 0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 352 ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 352 ~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
...|.|-......+.+.++. + +.+.++.+++.+++.+.|+. +|.+ ... ..+..++++.+.. +..
T Consensus 296 T~~gnpl~~aaa~a~l~~l~-~----~~~~~~~~~~g~~l~~~l~~l~~~~p~v---~~v-rG~Gl~~~ie~~~-~~~-- 363 (421)
T PRK09792 296 TYAGNPLAVAAAHAVLNIID-K----ESLCERANQLGQRLKNTLIDAKESVPAI---AAV-RGLGSMIAAEFND-PQT-- 363 (421)
T ss_pred CCCCCHHHHHHHHHHHHHHH-h----hhHHHHHHHHHHHHHHHHHHHHHhCCCc---cee-cccceEEEEEecC-Ccc--
Confidence 01233333333344454442 1 23444555555555555543 4432 110 0122334444333 110
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
..........+...+.+ .||.+.+ + ++ .++.+|+.+++..+
T Consensus 364 -------~~~~~~~~~~l~~~~~~-~Gv~i~~---~-g~---------------------------~~~~irl~P~l~i~ 404 (421)
T PRK09792 364 -------GEPSAAIAQKIQQRALA-QGLLLLT---C-GA---------------------------YGNVIRFLYPLTIP 404 (421)
T ss_pred -------CCcchHHHHHHHHHHHH-CCcEEee---c-CC---------------------------CCCEEEEeCCCcCC
Confidence 00000124556666655 5998852 1 11 13789999998899
Q ss_pred HHHHHHHHHHHHHHHH
Q 038499 508 NEEFEFTLEALEFIAI 523 (609)
Q Consensus 508 ~eeid~ll~al~~v~~ 523 (609)
++|+++++++|.+++.
T Consensus 405 ~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 405 DAQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998874
No 312
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1e-11 Score=134.27 Aligned_cols=356 Identities=17% Similarity=0.145 Sum_probs=196.0
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|++ |+|..++ |-..+.|.+++.+++..... ... .....+...++.+.+.+.+...
T Consensus 29 ~~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~-----~~~~~~~~~~la~~l~~~~p~~ 99 (425)
T PRK07495 29 AENAEIWDKEGRR---YIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-TCH-----QVVPYENYVRLAERLNALVPGD 99 (425)
T ss_pred eeecEEEeCCCCE---EEEccccHHhhccCCCCHHHHHHHHHHHhhccC-ccc-----CccCCHHHHHHHHHHHHhCCCC
Confidence 5556677777753 9997654 66788999999998865321 110 0112334556777777777543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G-------------~ 203 (609)
..+.+.|+.|||.+ +...+++-- .. .|. +.|+.-...||.... .....+ .
T Consensus 100 ~~~~v~f~~SGseA-~e~AlklAr-------------~~-tgr-~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 163 (425)
T PRK07495 100 FAKKTIFVTTGAEA-VENAVKIAR-------------AA-TGR-SAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMP 163 (425)
T ss_pred CCCEEEECCchHHH-HHHHHHHHH-------------Hh-hCC-CeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCC
Confidence 22379999888886 333322210 01 222 246655555554432 211111 1
Q ss_pred eEEEEecCCC-CCCC----HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC
Q 038499 204 EVVEIGLDDD-GLLD----IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 204 ~vv~v~~~~~-g~ld----~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~ 274 (609)
.++.+|.+.+ ..++ ++++++.+.+....+++.++++..+...+|.+.+ +++|.++|++||+++|+|+++..
T Consensus 164 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG 243 (425)
T PRK07495 164 DVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG 243 (425)
T ss_pred CeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence 3444554321 1122 4455666642112246778888887777886643 77899999999999999999763
Q ss_pred CcccccCCCCCCC--CccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 275 PYVEIDVRSGQTD--GYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 275 ~~~~id~~~~~~~--~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
-...-.+-..... .+|++++ .|.+++...+|++++++++ .+.+.+...+ . .
T Consensus 244 ~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G~pigav~~~~~i--~~~~~~~~~~-~----------------------T 296 (425)
T PRK07495 244 FARTGKLFAMEHHEVAADLTTM--AKGLAGGFPLAAVTGRAEI--MDAPGPGGLG-G----------------------T 296 (425)
T ss_pred CCcCCCceeecccCCCCCEEee--hhhhcCCccceEEEEcHHH--HhccCCCCcC-C----------------------C
Confidence 2111111111111 3465554 6999865568999999888 3443321110 0 0
Q ss_pred cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
..+.|.......++++++ +. +.+.++.+++.+++.++|++ .|.+ ++.+. .-++.+.+.+ ..
T Consensus 297 ~~~~pl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-----Gl~~~iel~~-~~--- 362 (425)
T PRK07495 297 YGGNPLGIAAAHAVLDVI--EE---EDLCERANQLGNRLKQRLASLRETVPEIADIRGP-----GFMNAVEFND-AD--- 362 (425)
T ss_pred CCCCHHHHHHHHHHHHHH--Hh---chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-----ceEEEEEEec-CC---
Confidence 123333333334555544 21 23445555566666555543 3432 22222 2233333322 11
Q ss_pred CCCCCCCCCCCC--CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 428 LGENTKTETDKP--LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 428 ~~~~~~~~~~~~--l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.... -....+.+.+.+ .|+.++.. . + ..+.+||..++.
T Consensus 363 --------~~~~~~~~~~~~~~~~~~-~Gvl~~~~---g-~---------------------------~~~~~r~~Ppl~ 402 (425)
T PRK07495 363 --------SGLPSAEFANRVRLKALE-KGLILLTC---G-V---------------------------HGNVIRFLAPIT 402 (425)
T ss_pred --------CCCccHHHHHHHHHHHHH-CCeEEeec---C-C---------------------------CCCEEEEeCCCc
Confidence 0000 013456666655 59887521 1 1 136899999999
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 038499 506 MSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 506 ~t~eeid~ll~al~~v~~~~ 525 (609)
.|++|+++++++|+++++..
T Consensus 403 it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 403 IQDDVFAEALDILEASILEA 422 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988653
No 313
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=1.1e-13 Score=132.31 Aligned_cols=290 Identities=17% Similarity=0.134 Sum_probs=186.4
Q ss_pred HHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEE
Q 038499 128 NYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVE 207 (609)
Q Consensus 128 ~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~ 207 (609)
..++.--+..++ .|.. |-|+.+.|..+++... .||.. .|+..|+.|..+...+...+++|+.
T Consensus 76 ~a~~~dkpLt~d-nic~-GvGsDE~ID~iiR~~c---------------~PGke-KIl~cPPtysMY~v~A~iNd~eVvk 137 (375)
T KOG0633|consen 76 DALAQDKPLTSD-NICV-GVGSDELIDLIIRCVC---------------DPGKE-KILDCPPTYSMYVVDAAINDAEVVK 137 (375)
T ss_pred hhcccCCCCCcc-ceEE-ecCcHHHHHHHHhhee---------------cCCcc-ceeecCCcceeEEEEeecCCceEEE
Confidence 333333455554 6666 5999999999988764 67844 5888888887766666778999999
Q ss_pred EecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh-CCeEEEeccccCCc-ccccCCCCC
Q 038499 208 IGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPY-VEIDVRSGQ 285 (609)
Q Consensus 208 v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~-g~~vivD~A~~~~~-~~id~~~~~ 285 (609)
+|.++++.++.+++.+.++.+ ..+|++++++|.||||.+...+.|.++++.- +.++++|+|+--.. +.-.| ++.
T Consensus 138 vpl~pdF~lnvdai~evl~~d---s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~-~lV 213 (375)
T KOG0633|consen 138 VPLNPDFSLNVDAIAEVLELD---SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRM-KLV 213 (375)
T ss_pred ecCCCCccccHHHHHHHHhcc---ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccc-hHh
Confidence 999999999999999999853 4789999999999999999999999988764 79999999943110 11111 111
Q ss_pred CCCccE-EEEcCCCCCCCCC-CcEEEEEechhhc-cCCC-CCCccCCCceEeecccccccccccccccccccCCChhHHH
Q 038499 286 TDGYDA-IFLSTHKFLGGPG-SPGILLMTKALYQ-LGSF-PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ 361 (609)
Q Consensus 286 ~~~~D~-v~~S~hK~lggp~-g~G~L~~~~~~~~-l~~~-~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~ 361 (609)
...... +.-+++|-+|-.+ .+|+-+.+..+.+ +.++ .|+ |+..
T Consensus 214 ~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPY---------------------------------NiS~ 260 (375)
T KOG0633|consen 214 KKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPY---------------------------------NISV 260 (375)
T ss_pred HhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCc---------------------------------cccc
Confidence 112333 4447889887322 2788887777632 1111 111 1111
Q ss_pred H-HHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 362 M-IRAALAFWV-KEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 362 ~-~~aal~~~~-~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
. -.+|++..- .+..-++..+..+.+.+.++.+.|.++|++. +.++ ...+++...+.+ +. .
T Consensus 261 ~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg---~daNFiLi~v~~-~~-------------n 323 (375)
T KOG0633|consen 261 AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGG---SDANFILIEVTG-GD-------------N 323 (375)
T ss_pred hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCc---ccccEEEEEEcC-CC-------------c
Confidence 1 122333221 1112345566666667788889999888775 2233 133455555554 21 1
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
.+ ...+...+.-+.|+.+|- ++... + -.|++||+.+ |+||.+.+++.+
T Consensus 324 ~~-akkly~q~at~~gVvVRf-------rgse~-~--------------------c~G~lRitvG---t~EentvL~k~~ 371 (375)
T KOG0633|consen 324 GM-AKKLYKQDATKMGVVVRF-------RGSEE-G--------------------CKGYLRITVG---TPEENTVLMKCL 371 (375)
T ss_pred HH-HHHHHHHHHHhcceEEEE-------cCCcc-c--------------------cceeEEEEcC---CcccchHHHHHH
Confidence 12 233444444567999981 11110 0 2589999999 999999999999
Q ss_pred HHH
Q 038499 519 EFI 521 (609)
Q Consensus 519 ~~v 521 (609)
+.+
T Consensus 372 K~~ 374 (375)
T KOG0633|consen 372 KQF 374 (375)
T ss_pred Hhh
Confidence 875
No 314
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=8.5e-12 Score=135.87 Aligned_cols=356 Identities=15% Similarity=0.107 Sum_probs=192.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.+. ..... .....+...++.+++.+.+...
T Consensus 45 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~~~-----~~~~~~~~~~la~~l~~~~p~~ 115 (443)
T PRK06058 45 AGGGIVEDVDGN---RLIDLGSGIAVTSVGNSAPRVVEAVREQVARF-THTCF-----MVTPYEGYVAVAEQLNRLTPGD 115 (443)
T ss_pred eeeeEEEeCCCC---EEEEcCcchhhhccCCCCHHHHHHHHHHHHhc-cCccc-----cccCCHHHHHHHHHHHHhCCCC
Confidence 344555555554 48998653 556789999999988653 11111 1112344556777788877543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G-------------~ 203 (609)
..+.+.|+.+|+.+ +...+++-- .. .|.. .|+.-...||+.. ..+...+ .
T Consensus 116 ~~~~v~f~~sGseA-~e~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~ 179 (443)
T PRK06058 116 HEKRSALFNSGAEA-VENAVKIAR-------------SY-TGRQ-AVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAP 179 (443)
T ss_pred CCCEEEEeCCcHHH-HHHHHHHHH-------------Hh-hCCC-eEEEECCCcCcChHHHHhhcCCCcccccccCCCCC
Confidence 22378999889775 333333210 01 1222 4665555555543 2222111 1
Q ss_pred eEEEEecCCCC------CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCe
Q 038499 204 EVVEIGLDDDG------LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGF 265 (609)
Q Consensus 204 ~vv~v~~~~~g------~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~ 265 (609)
.+..++..... ..+ ++.+++.+. .+++..+++...+...|.+.| +++|.++|++||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 180 EVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG----ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CceEcCCCcccccccccccchHHHHHHHHHHHHHhhC----CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 22333321110 011 122233332 146778888877777787765 78999999999999
Q ss_pred EEEeccccCC-cccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 266 ACFDFAASGP-YVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 266 vivD~A~~~~-~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
+|+|+++.+. ...- -....+ -..|+++++ |.+||...+|++++++++ .+.+.+...+ ++
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~g-v~PDiv~~g--K~l~~G~Pi~av~~~~~i--~~~~~~~~~~-~T------------ 317 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEG-IVPDLITTA--KGIAGGLPLSAVTGRAEI--MDAPHPGGLG-GT------------ 317 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcC-CCCCEEEEc--ccccCCCccEEEEEcHHH--HhhccCCCCC-CC------------
Confidence 9999997632 1110 001110 135888885 999865568999999988 3444322111 11
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEecc
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
..|.|-......+++... + .+.+.++.+++.+++.+.|+++. ...+++.. .....++.+.+..
T Consensus 318 ----------~~gnpl~~aaa~a~L~~~--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~ 381 (443)
T PRK06058 318 ----------YGGNPVACAAALAAIETI--E---EDDLVARARQIEALMTDRLRALAAEDDRIGDV-RGRGAMIAIELVK 381 (443)
T ss_pred ----------CCCCHHHHHHHHHHHHHH--H---HcCHHHHHHHHHHHHHHHHHHHHhhCCcEEee-eccceEEEEEEec
Confidence 123333333334444433 1 23455666666677777665431 11111111 0123444444433
Q ss_pred CCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEe
Q 038499 422 STINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls 501 (609)
+.. ..........+.+.+.+ .||.+.++. + .++++|+.
T Consensus 382 -~~~---------~~~~~~~~~~l~~~~~~-~Gv~~~~~~----~---------------------------~~~~lr~~ 419 (443)
T PRK06058 382 -PGT---------TEPDAELTKALAAAAHA-AGVIVLTCG----T---------------------------YGNVIRLL 419 (443)
T ss_pred -CCC---------CCCcHHHHHHHHHHHHH-CCeEEeccC----C---------------------------CCCEEEEE
Confidence 100 00000012345555555 599887431 1 02689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Q 038499 502 FPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 502 ~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++..|++|+++++++|++++++
T Consensus 420 Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 420 PPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CCCccCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 315
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=8.7e-12 Score=134.89 Aligned_cols=354 Identities=14% Similarity=0.096 Sum_probs=195.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.+. ...... ........++.+.+.+.+...
T Consensus 29 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~la~~l~~~~p~~ 99 (421)
T PRK06777 29 AENATLWDVEGR---EYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQF-THTAYQ-----IVPYASYVTLAERINALAPID 99 (421)
T ss_pred eecCEEEeCCCC---EEEEcccCHHhhccCCCCHHHHHHHHHHHhhc-cccccc-----ccCChHHHHHHHHHHHhCCCC
Confidence 445666666664 48997654 567788999999888753 111110 011223445667777776532
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHHcCc-------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQSLA------------- 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~G~------------- 203 (609)
..+.+.|+.|||.+ +...+++-- .. .|. +.|+.-...||+.... ....+-
T Consensus 100 ~~~~~~f~~sGseA-~e~AlklAr-------------~~-tgr-~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~ 163 (421)
T PRK06777 100 GPAKTAFFTTGAEA-VENAVKIAR-------------AY-TGR-PGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPG 163 (421)
T ss_pred CCceEEEeCCcHHH-HHHHHHHHH-------------Hh-hCC-CeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCC
Confidence 22378999888886 333322210 01 222 2466555555554322 221121
Q ss_pred eEEEEecCCC--C---CCCHHHHHHHHhhhccCCCceEEEEecccCccccc-cC---HHHHHHHHHHhCCeEEEeccccC
Q 038499 204 EVVEIGLDDD--G---LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY-SD---TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 204 ~vv~v~~~~~--g---~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~-~d---l~~I~~la~~~g~~vivD~A~~~ 274 (609)
.+..++.... + ..+++++++.+.+....+++..+++..+.+..|.. .| +++|.++|++||+++|+|+++..
T Consensus 164 ~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg 243 (421)
T PRK06777 164 SIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTG 243 (421)
T ss_pred CcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 1222222211 1 12366778777532122467788899888888965 44 78999999999999999999763
Q ss_pred C-cccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 275 P-YVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 275 ~-~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
- ...- ..... ....|+++ +.|.+++...+|++++++++ .+.+.+...+ +
T Consensus 244 ~gr~g~~~~~~~~-~~~pDiv~--~sK~l~~G~pigav~~~~~i--~~~~~~~~~~-~---------------------- 295 (421)
T PRK06777 244 FARTGKLFAMEYY-DVKPDLIT--MAKSLGGGMPISAVVGRAEV--MDAPAPGGLG-G---------------------- 295 (421)
T ss_pred CccCCchhhhhhc-CCCCCEEe--eehhhcCCCceEEEEEcHHH--HhccCCCCCC-C----------------------
Confidence 2 2111 11111 01357664 57999855558999999888 3444322110 0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 352 ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 352 ~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
...+.|.......++++.. + .+.+.++.+++.+++.+.|+++ |.+.-+.+ ...++.+.+.. +.
T Consensus 296 T~~~~p~~~aaa~a~L~~~--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg----~G~~~~i~~~~-~~--- 362 (421)
T PRK06777 296 TYAGNPLAVAAALAVLDVI--A---EEKLCQRALILGAHLVEVLEKAKASCPAIVDIRA----RGSMVAVEFND-PQ--- 362 (421)
T ss_pred CCCcCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecC----ceEEEEEEEec-Cc---
Confidence 0123333333334444433 2 2455666777777777777553 43322222 23344332322 10
Q ss_pred CCCCCCCCCCCC-C-ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 428 LGENTKTETDKP-L-HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 428 ~~~~~~~~~~~~-l-~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.+.. . -...+.+.+.+ .||.+.++..+ .+++||.+++.
T Consensus 363 --------~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~-------------------------------g~~lr~~ppl~ 402 (421)
T PRK06777 363 --------TGKPSPEFTRQYQRQALE-EGLLLLSCGVH-------------------------------GNVIRFLYPLT 402 (421)
T ss_pred --------cCCccHHHHHHHHHHHHh-CCeEEeecCCC-------------------------------CCEEEEeCCCC
Confidence 0000 0 12334444444 69998754211 26899999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 038499 506 MSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 506 ~t~eeid~ll~al~~v~~ 523 (609)
.|++++++++++|++.+.
T Consensus 403 i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 403 IPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999988763
No 316
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.57 E-value=2.4e-12 Score=141.54 Aligned_cols=372 Identities=14% Similarity=0.068 Sum_probs=198.2
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..+ .|-..+.|.+++.+++.... ..+.. . ...++...++.+.|.+.+...
T Consensus 78 ~~G~~l~D~dG~---~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~-~~~~~---~-~~~~~~~~~lae~L~~~~~~~ 149 (504)
T PLN02760 78 SEGSYVYDINGK---KYLDALAGLWCTALGGSEPRLVAAATEQLNKLP-FYHSF---W-NRTTKPSLDLAKELLEMFTAR 149 (504)
T ss_pred eeeeEEEECCCC---EEEEcCcCHHhcccCCCCHHHHHHHHHHHhhcc-ceecc---c-ccCcHHHHHHHHHHHhhcCCC
Confidence 455666666664 3888654 35667899999999886531 11110 0 112344566777777775422
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce------------E
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE------------V 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------v 205 (609)
.-+.+.|+.||+++... ++++.- ... ...-.++.+.+|......|.+........|.. +
T Consensus 150 ~~~~v~f~~SGsEA~e~-AlKlAr-~~~-------~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~ 220 (504)
T PLN02760 150 KMGKVFFTNSGSEANDT-QVKLVW-YYN-------NALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFV 220 (504)
T ss_pred CCCEEEEeCChHHHHHH-HHHHHH-HHH-------HhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCc
Confidence 22378999888886333 333210 000 00002333324444445555544343323321 2
Q ss_pred EEEecCCC------C-------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 206 VEIGLDDD------G-------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 206 v~v~~~~~------g-------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
..++.... + ....++|++.+.+ ...+++..+++..+....|.+.| +++|.++|++||+++|+
T Consensus 221 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~ 299 (504)
T PLN02760 221 LHTDCPHYWRFHLPGETEEEFSTRLADNLENLILK-EGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIA 299 (504)
T ss_pred EEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHh-cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEe
Confidence 22221110 0 0112457776642 11245778889988888899988 99999999999999999
Q ss_pred ecccc-CCccccc--CCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 269 DFAAS-GPYVEID--VRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 269 D~A~~-~~~~~id--~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
|+++. +|-...- ..... -.+|+++++ |.+||.. .+|.+++++++ .+.+.+.....+...
T Consensus 300 DEV~TGfGRtG~~~a~e~~g-v~PDivtlg--K~lggG~~PigAv~~~~~i--~d~~~~~~~~~~~~~------------ 362 (504)
T PLN02760 300 DEVICAFGRLGTMFGCDKYN-IKPDLVSLA--KALSSAYMPIGAVLVSPEI--SDVIHSQSNKLGSFA------------ 362 (504)
T ss_pred cchhhCCcccchhhHHHhcC-CCCcEEEec--ccccCCccccceEeecHHH--HhhhhcccccccCcc------------
Confidence 99984 4332210 01110 135877765 9997642 46888899888 333321100000000
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
......|.|...+...+.++... .+.+.++.+++.+++++.|+++....+++.. .....++.+.+.. ..
T Consensus 363 ----h~~T~~gnPl~~Aaala~Le~i~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~-~~ 431 (504)
T PLN02760 363 ----HGFTYSGHPVSCAVALEALKIYK-----ERNIPEHVNKIAPRFQDGIKAFSGSPIIGEI-RGTGLILGTEFVD-NK 431 (504)
T ss_pred ----cCCCCCCCHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhcCCCeeeE-EeCceEEEEEEec-CC
Confidence 00011234444444455555442 1245566667777777766543211111110 0122233333322 11
Q ss_pred CCcCCCCCCCCCCCCC----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 425 NSSLGENTKTETDKPL----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
. .....- -...+.+.+.+ .||.+++. ...+|+
T Consensus 432 ~---------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~----------------------------------g~~lrl 467 (504)
T PLN02760 432 S---------PNDPFPAEWGVGAYFGAECKK-RGMLVRVA----------------------------------GDNIMM 467 (504)
T ss_pred c---------ccccccchhHHHHHHHHHHHh-CCcEEEec----------------------------------CCEEEE
Confidence 0 000000 03346666655 59887621 246899
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++++.+|++|++++++++++++...
T Consensus 468 ~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 468 SPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988664
No 317
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.56 E-value=1e-11 Score=131.81 Aligned_cols=352 Identities=17% Similarity=0.143 Sum_probs=206.6
Q ss_pred ceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH
Q 038499 77 RLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTT 150 (609)
Q Consensus 77 ~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtt 150 (609)
...|+|..+. |-..+.|.+++.+++..+. .+++... .++...++.+++.+.+..+..+.++|+.+||.
T Consensus 55 G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~-h~~~~~~-----~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGae 128 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN-HTHTRDL-----YYEPYVELAEKLTALAPGSGLKKVFFGNSGAE 128 (447)
T ss_pred CCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh-cccCCcc-----cchhHHHHHHHHHHhCCcccCCeEEecCCcHH
Confidence 3469998873 5567899999999887652 2333211 12455667777777777643347888888888
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHc-------------CceEEEEecCCC--C
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQS-------------LAEVVEIGLDDD--G 214 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~-------------G~~vv~v~~~~~--g 214 (609)
+ +...+++-- .-.|.. .|+.-...||.. ..+.... ...|..+|.... +
T Consensus 129 A-~E~AiKiAr--------------~~Tgr~-~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~ 192 (447)
T COG0160 129 A-VEAAIKIAR--------------AYTGRP-GVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRC 192 (447)
T ss_pred H-HHHHHHHHH--------------HHhCCC-cEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccC
Confidence 6 333333210 012222 355555555543 3333221 123666665431 1
Q ss_pred ----------CCCHHHHHHHHhhhc-cCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 215 ----------LLDIEALRSKLELYK-DAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 215 ----------~ld~e~L~~al~~~~-~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.-..+.++..+.... ...++..+++..++...|.+.| ++++.++|++||+++|+|++|.+-..--
T Consensus 193 p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG 272 (447)
T COG0160 193 PFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG 272 (447)
T ss_pred cccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 113344566554322 2235679999999999999977 7889999999999999999987532221
Q ss_pred cCCCCCCC--CccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 280 DVRSGQTD--GYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 280 d~~~~~~~--~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
.|-..+.. ..|+++++ |.+|+...+|.++.++++ .+ ..|...++. ..|.|
T Consensus 273 ~~fa~E~~gv~PDivt~a--K~ig~G~Pl~avv~r~ei--~~-~~~g~~~~T-----------------------f~GNp 324 (447)
T COG0160 273 KMFAFEHFGVEPDIVTLA--KSLGGGLPLSAVVGRAEI--MD-WPPGGHGGT-----------------------FGGNP 324 (447)
T ss_pred cchhhhhcCCCCCEEEec--ccccCCCceeEEeccHHh--cc-cCCcccCCC-----------------------CCcCH
Confidence 22221111 46998887 999886668999999998 33 322221111 13444
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
--.+...+.++. +..+.+.++..++.++++++|.++. ...+++.. ...+.+...-...+.. + ..
T Consensus 325 va~Aaa~AvL~v-----ie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV--RG~Glm~giE~v~d~~------t--~~ 389 (447)
T COG0160 325 VACAAALAVLDV-----IEEENLLERAAELGEYLRDRLEELQEKHPLIGDV--RGLGLMIGVELVKDRD------T--KE 389 (447)
T ss_pred HHHHHHHHHHHH-----HHHccHHHHHHHHHHHHHHHHHHHHhhcCceecc--cccceEEEEEEecCCC------C--CC
Confidence 333333444442 2234677788888888888886531 22244442 2223333222210100 0 00
Q ss_pred CCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 038499 437 DKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLE 516 (609)
Q Consensus 437 ~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~ 516 (609)
-..-....++..+.+ .|+.+.+ |. + ..+.+||..+...|++++|.+++
T Consensus 390 p~~~~~~~i~~~~~~-~Glil~~---~G-~---------------------------~~nviRi~PPL~is~e~~d~~l~ 437 (447)
T COG0160 390 PDAELAAKIVARAFE-RGLLLLT---CG-P---------------------------HGNVLRILPPLTISDEELDEGLD 437 (447)
T ss_pred CCHHHHHHHHHHHHH-cCCEEec---cC-C---------------------------CCcEEEEeCCcccCHHHHHHHHH
Confidence 000124567777766 4876652 22 1 14899999999999999999999
Q ss_pred HHHHHHHhc
Q 038499 517 ALEFIAIYG 525 (609)
Q Consensus 517 al~~v~~~~ 525 (609)
+|++++...
T Consensus 438 il~~al~~~ 446 (447)
T COG0160 438 ILEEALKEA 446 (447)
T ss_pred HHHHHHHhh
Confidence 999988653
No 318
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.55 E-value=4.1e-12 Score=137.91 Aligned_cols=349 Identities=17% Similarity=0.091 Sum_probs=190.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..+. |-.++.|.+++.+++.... +. . .......++++.|++.+...
T Consensus 37 ~~G~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~--~----~~~~~~~~lae~l~~~~~~~ 104 (423)
T TIGR00713 37 GKGAYLYDVDGN---EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT---SY--G----APTEAEILLAKEIISRVPSV 104 (423)
T ss_pred ccCCEEEeCCCC---EEEEccccccccccCCCCHHHHHHHHHHHHhCC---cC--C----CCCHHHHHHHHHHHHhCCcc
Confidence 444555555554 48887643 5667899999999886421 11 0 11234577888888888653
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHH--cCc-----------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQ--SLA----------- 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~--~G~----------- 203 (609)
+.|+|+.+|+.+ +..++++.. .....+ .|++....||..... +.. .+.
T Consensus 105 --~~v~~~~sGseA-~e~Alk~ar-------------~~~gr~--~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 166 (423)
T TIGR00713 105 --EMVRFVNSGTEA-TMSAVRLAR-------------GYTGRD--KIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGV 166 (423)
T ss_pred --cEEEEeCCHHHH-HHHHHHHHH-------------HhhCCC--EEEEEcCCCCCChhhhhccccCcccccCCCCCCCC
Confidence 379999777775 433333210 011223 566666666664322 211 111
Q ss_pred ------eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc
Q 038499 204 ------EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 204 ------~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~ 273 (609)
.+..++. -|+++|++++++. .++++++++....+.+|.+.+ +++|.++|++||+++|+|+++.
T Consensus 167 ~~~~~~~~~~~~~-----~d~~~l~~~i~~~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 239 (423)
T TIGR00713 167 PEDFAKLTLVLPY-----NDLEALEEVFEEY--GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT 239 (423)
T ss_pred CcccccceEEeCC-----CCHHHHHHHHHHc--CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 1122221 2799999998742 246777777644444898877 6889999999999999999986
Q ss_pred CCcccccC-CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 274 GPYVEIDV-RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 274 ~~~~~id~-~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
........ ........|++ ++.|.+++...+|++++++++ .+.+.+. +.. ....
T Consensus 240 g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~~~~i--~~~~~~~---~~~------------------~~~~ 294 (423)
T TIGR00713 240 GFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGGRREI--MERLAPE---GPV------------------YQAG 294 (423)
T ss_pred ccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeEHHHH--HHhhCcC---CCe------------------eecc
Confidence 43211000 00000134654 577999854458999999888 3444321 000 0000
Q ss_pred c-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 353 S-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 353 ~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
. .+.|.......++++... +..-.+.+.+....+++.+.+.+.+.+-+ .+.+ ...++.+.+..+...
T Consensus 295 T~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~-----~g~~~~v~~~~~~~~----- 363 (423)
T TIGR00713 295 TLSGNPLAMAAGLATLKLLD-EEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR-----VGSMFSLFFTEEEVT----- 363 (423)
T ss_pred CCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----eccEEEEEEecCCCC-----
Confidence 1 122222333344444431 11123455555555555555555554211 1222 223444333220000
Q ss_pred CCCCCC-CCCCC---hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 431 NTKTET-DKPLH---GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 431 ~~~~~~-~~~l~---~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
+.. ....+ ...+++.|.+ .||.+.++. .+.+|+++. +
T Consensus 364 ---~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~~l~~~--~ 404 (423)
T TIGR00713 364 ---NYADAKKSDTELFAKFFHEMLD-KGVFLPPSQ---------------------------------FEACFLSAA--H 404 (423)
T ss_pred ---ChhhhhcccHHHHHHHHHHHHH-CCeEEecCC---------------------------------ccceeeECC--C
Confidence 000 00011 2256667766 599876321 245788875 6
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 038499 507 SNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 507 t~eeid~ll~al~~v~~~ 524 (609)
|++|+++++++|++++..
T Consensus 405 t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 405 TEEDIENTIEAAEEVFAE 422 (423)
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999988754
No 319
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.54 E-value=1.1e-11 Score=134.66 Aligned_cols=363 Identities=11% Similarity=0.071 Sum_probs=199.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++......+.. . ...+...++.++|.+++...
T Consensus 38 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-----~-~~~~~~~~la~~L~~~~p~~ 108 (445)
T PRK09221 38 AEGMYYTDADGRK---ILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAF-----Q-MGHPLAFELAERLAELAPGG 108 (445)
T ss_pred ccccEEEeCCCCE---EEEccccHhhccCCCCCHHHHHHHHHHHHhccCcccc-----c-cCCHHHHHHHHHHHHhCCCC
Confidence 5567777777754 9998654 567789999999888653111110 0 11234456777788877533
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G------------~ 203 (609)
.+ .|.|+.||+.+ +...+++ .... ..-..+.+..|+.-...||+... ++...| .
T Consensus 109 ~~-~v~f~~sGseA-ve~AlklAr~~~----------~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~ 176 (445)
T PRK09221 109 LD-HVFFTNSGSES-VDTALKIALAYH----------RARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLP 176 (445)
T ss_pred CC-EEEEeCCcHHH-HHHHHHHHHHHH----------HhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCC
Confidence 33 89999888885 3333222 1100 00011123356665556665432 121111 1
Q ss_pred eEEEEecCC---C---C-------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeE
Q 038499 204 EVVEIGLDD---D---G-------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFA 266 (609)
Q Consensus 204 ~vv~v~~~~---~---g-------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~v 266 (609)
.+..++... . + ...++++++.+... ..+++.+|++..+....|.+.| +++|.++|++||+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~ll 255 (445)
T PRK09221 177 GVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH-DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILL 255 (445)
T ss_pred CCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 233343221 0 0 01245777777632 1145778899999999999988 999999999999999
Q ss_pred EEecccc-CCccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 267 CFDFAAS-GPYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 267 ivD~A~~-~~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
|+|++++ +|-.. ....... -..|+++++ |.++|. ..+|.+++++++. +.+... .. .. .
T Consensus 256 I~DEV~tG~GRtG~~~~~~~~g-v~PDi~~~g--K~l~gG~~Pi~av~~~~~i~--~~~~~~-~~-~~-----------~ 317 (445)
T PRK09221 256 IFDEVITGFGRLGAAFAAERFG-VTPDIITFA--KGLTNGAIPMGAVIASDEIY--DAFMQG-PE-YA-----------I 317 (445)
T ss_pred EEeehhhCCCcCchhhHHHhcC-CCCCEEEec--cccccCcccceeeEEcHHHH--HhhccC-cc-cc-----------c
Confidence 9999975 33211 1111110 134877665 888653 2368888888873 333210 00 00 0
Q ss_pred ccccccccccc-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceE-EEEec
Q 038499 343 LYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAIL-SFNIH 420 (609)
Q Consensus 343 ~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~-~f~~~ 420 (609)
.+ ..... .|.|-......+.+..+ + .+.+.++.+++.+++++.|+++.+...++.. ...+.+ .+.+.
T Consensus 318 ~~----~~~~T~~~~pl~~aaa~a~L~~i--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v--rg~Gl~~~v~~~ 386 (445)
T PRK09221 318 EF----FHGYTYSAHPVACAAGLATLDIY--R---EEDLFERAAELAPYFEDAVHSLKGLPHVIDI--RNIGLVAGIELA 386 (445)
T ss_pred cc----ccccCCCcCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHhhccCCCEEEE--ecCceEEEEEEe
Confidence 00 00011 12332233333444433 2 1245677788888888877665222111111 112222 22222
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
. .. .+.......+.+.|.+ .||.++.+ ...+|+
T Consensus 387 ~-~~-----------~~~~~~~~~~~~~~~~-~Gv~~~~~----------------------------------~~~lr~ 419 (445)
T PRK09221 387 P-RP-----------GAPGARGYEAFMKCFE-KGLLVRYT----------------------------------GDTIAL 419 (445)
T ss_pred c-cc-----------ccccchHHHHHHHHHH-CCeEEeec----------------------------------CCEEEE
Confidence 2 10 0000123467777765 59988621 257999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++++.+|++|+++++++|++++..
T Consensus 420 ~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 420 SPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998864
No 320
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=3e-12 Score=124.89 Aligned_cols=323 Identities=16% Similarity=0.113 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEE-CCCCccchHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFV-GPHEHHSNLL 196 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~ 196 (609)
-..+.+.+...+.+-+|-+-. ++|.+| +|+..+...+...++-. ...|+...|+. -.++|-++..
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalT-nGSQs~fFYlfNlF~G~------------~sdG~~k~illPLaPeYiGY~d 142 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALT-NGSQSAFFYLFNLFAGR------------RSDGTEKKILLPLAPEYIGYAD 142 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeec-CCccchHHHHHHHhcCc------------cCCCcceeEeeccChhhccccc
Confidence 456677777788888886532 389998 89999999888887632 13344334444 3566666554
Q ss_pred HHHHcCceEEE---EecCC----CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeE
Q 038499 197 SWRQSLAEVVE---IGLDD----DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFA 266 (609)
Q Consensus 197 ~~~~~G~~vv~---v~~~~----~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~v 266 (609)
....-.+=|.. +.+.+ ..++|.++|. +. +.+-++++|-|.||||.+.. +.+|.+++++||+.+
T Consensus 143 ~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~-----e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPl 215 (417)
T COG3977 143 AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG-----ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPL 215 (417)
T ss_pred cccCccceeeccCCcccccccceeeccCHHHcc--cc-----cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcE
Confidence 33221111111 11222 2477888765 33 57889999999999999955 556778899999999
Q ss_pred EEeccccCCcccccCCCCCC-CC-ccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 267 CFDFAASGPYVEIDVRSGQT-DG-YDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 267 ivD~A~~~~~~~id~~~~~~-~~-~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
++|.|++.|.-.+.+..... .+ --+.++|.+|. |-|+ .+|+++.+++++ ..+... .+.+...
T Consensus 216 iIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane~vi--qaitnm---n~iisLa--------- 280 (417)
T COG3977 216 IIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKVI--QAITNM---NGIISLA--------- 280 (417)
T ss_pred EEecccCCCCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEccHHHH--HHHHhc---cceeeec---------
Confidence 99999998876654443211 22 34778899998 4464 499999999983 222111 0110000
Q ss_pred ccccccccccCCChhHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccC
Q 038499 344 YLEDIEERESGGTPQVIQ-MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
+.| .| |++.+ ++..+--..+.+++=..-.+++.+...+.++..+-+. .+.+..+ ...||+|....
T Consensus 281 -----p~~--~G-~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~iHkp----EGAIFlWLWf~- 346 (417)
T COG3977 281 -----PGR--MG-PAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHKP----EGAIFLWLWFK- 346 (417)
T ss_pred -----CCC--cc-HHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceeeecC----Ccceeehhhhc-
Confidence 011 11 23322 1211111111232222333444444455555555543 4566655 45788777665
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
+ .+++..++.++|.. .|+.+.+|..+- .|++++... ...++|+|.
T Consensus 347 d--------------LPItt~~LYq~LKa-~Gvl~VPG~~FF-------pGl~~ewpH-------------~hqC~Rmn~ 391 (417)
T COG3977 347 D--------------LPITTEELYQRLKA-RGVLMVPGHYFF-------PGLDKEWPH-------------THQCMRMNY 391 (417)
T ss_pred c--------------CCCCHHHHHHHHHh-CeEEEecccccC-------CCCCCCCCC-------------ccceEEEec
Confidence 2 34788999999965 599999887554 233332222 358999997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 503 PYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 503 ~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
. -++++++.-+++|.+.+++.+.
T Consensus 392 ~--~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 392 V--PEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHh
Confidence 5 4889999999999888877553
No 321
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=4e-11 Score=130.49 Aligned_cols=356 Identities=15% Similarity=0.094 Sum_probs=195.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... ..+.. ....+...++.+.|++.+...
T Consensus 31 a~G~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~ 101 (445)
T PRK08593 31 GYGATLTDVDGK---TYIDLLASASSQNVGHAPPRVVEAIKAQADKFI-HYTPA-----YMYHEPLVRLAKKLCELAPGD 101 (445)
T ss_pred eeeCEEEeCCCC---EEEECCccHHhhcCCCCCHHHHHHHHHHHHhcc-Ccccc-----ccCCHHHHHHHHHHHHhCCCC
Confidence 445556666664 38887543 5567899999998886431 11110 012344567778888887543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G-------------~ 203 (609)
..+.|.|+.||+.+.-..+-.+.. . .|.+ .|+.-...||. ....+...+ .
T Consensus 102 ~~~~v~f~~SGseA~e~AiklAr~--------------~-tgr~-~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~ 165 (445)
T PRK08593 102 FEKRVTFGLSGSDANDGIIKFARA--------------Y-TGRP-YIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLP 165 (445)
T ss_pred CCCEEEECCchHHHHHHHHHHHHH--------------h-hCCC-eEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCC
Confidence 223899998888863333221211 1 2322 45554444444 333332222 1
Q ss_pred eEEEEecCCC-----CCCC-------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 204 EVVEIGLDDD-----GLLD-------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 204 ~vv~v~~~~~-----g~ld-------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
.++.++.... +..+ ++++++.+.+....+++.+|++..+.+..|.+.| +++|.++|++||+++|
T Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI 245 (445)
T PRK08593 166 GFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFA 245 (445)
T ss_pred CcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 2344443221 0111 2445544432111246789999999999999877 8899999999999999
Q ss_pred Eecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 268 FDFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 268 vD~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
+|+++. ++...- ...... -..|++++ .|.+||...+|++++++++ .+.+.+...+
T Consensus 246 ~DEv~tg~GrtG~~~a~~~~g-v~pDi~t~--gK~l~~G~p~gav~~~~~i--~~~~~~~~~~----------------- 303 (445)
T PRK08593 246 VDDIQQGLGRTGKWSSISHFN-ITPDLMSF--GKSLAGGMPMSAIVGRKEI--MESLEAPAHL----------------- 303 (445)
T ss_pred EechhhCCCcCchHHHHHhcC-CCCCEeee--cccccCCcccEEEEEcHHH--HhhhccCCCC-----------------
Confidence 999974 332211 001110 13577655 5999764457999999888 3333211000
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEEe
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFNI 419 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~~ 419 (609)
.-..+.|-......+.++.+. .+.+.++.+++.+++.+.|++ .|.+ .+-+ ....+.+.+
T Consensus 304 ------~T~~~~pl~~aaa~a~l~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG-----~Gl~~gi~l 367 (445)
T PRK08593 304 ------FTTGANPVSCAAALATIDMIE-----DESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRG-----YGLSIGIDI 367 (445)
T ss_pred ------CCCCCCHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEec-----cceEEEEEE
Confidence 001233433333344444432 123455666666666666653 3322 1111 112223333
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. .... ..........+...|.+ .||.+.+. ....+|
T Consensus 368 ~~-~~~~--------~~~~~~~~~~~~~~~~~-~Gv~~~~~---------------------------------~~~~lr 404 (445)
T PRK08593 368 VS-DKKL--------KTRDNEAALKICNYCFE-HGVVIIAV---------------------------------AGNVLR 404 (445)
T ss_pred ec-CCCc--------CCCcHHHHHHHHHHHHH-CCeEEecc---------------------------------CCCEEE
Confidence 22 1000 00000113456667755 59887521 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+++.+|++|++++++++++++...
T Consensus 405 ~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 405 FQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988764
No 322
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=5.6e-11 Score=129.20 Aligned_cols=349 Identities=16% Similarity=0.120 Sum_probs=191.2
Q ss_pred CccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... ..... ........++.+.|.+.+..+..
T Consensus 45 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~ 115 (441)
T PRK05769 45 GVWVEDVDGN---VYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFL-HYSLT-----DFYYEPAVELAERLVEIAPGGFE 115 (441)
T ss_pred eEEEEeCCCC---EEEECCCchhhcccCCCCHHHHHHHHHHHHhcc-CccCc-----ccCCHHHHHHHHHHHHhCCCCCC
Confidence 3444444453 48998654 4456889999988886431 11110 01123456677778777753222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------ceE
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL-------------AEV 205 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G-------------~~v 205 (609)
+.|.|+.|||.+.-.++-.+.. . .|.+ .|+.-...||+.. ..+...+ ..+
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~--------------~-tgr~-~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~ 179 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARY--------------H-TGRK-YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGV 179 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHH--------------H-hCCC-eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCe
Confidence 3899998888863332221111 1 2322 4665555555443 2222211 123
Q ss_pred EEEecCCCCC-------------CCHHHHHHHH-hhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 206 VEIGLDDDGL-------------LDIEALRSKL-ELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 206 v~v~~~~~g~-------------ld~e~L~~al-~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
..++...... -+++.+++.+ +.....+++.+|++..+....|.+.| +++|.++|++||+++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli 259 (441)
T PRK05769 180 IHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLI 259 (441)
T ss_pred EEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 3443321100 0133455523 21111246778899999888999988 9999999999999999
Q ss_pred EeccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 268 FDFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 268 vD~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
+|+++++ +... ....... -..|+++++ |.+|+...+|++++++++ .... +...+ ++
T Consensus 260 ~DEv~tG~gr~G~~~a~~~~g-v~pDivt~~--K~l~~G~p~gav~~~~~i--~~~~-~~~~~-~T-------------- 318 (441)
T PRK05769 260 DDEVQTGMGRTGKMFAIEHFG-VEPDIITLA--KAIAGGLPLGAVIGRAEL--MFLP-PGSHA-NT-------------- 318 (441)
T ss_pred EechhhCCCcccceehhhccC-CCCCEEEEc--ccccCCcccEEEEEehhh--hhcC-CCCCC-CC--------------
Confidence 9999773 2221 1111111 135888765 988865557999999887 2221 11100 00
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEEe
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFNI 419 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~~ 419 (609)
..|.|.......++++.+ + . .+.++.+++.+++++.|++ .+-+ ++.+ +..++.+.+
T Consensus 319 --------~~g~p~~~aaa~a~L~~l--~---~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg-----~G~~~~i~~ 379 (441)
T PRK05769 319 --------FGGNPVAAAAALATLEEL--E---E-GLLENAQKLGEYLRKELKELKEKYEFIGDVRG-----LGLMIGVEL 379 (441)
T ss_pred --------CCcCHHHHHHHHHHHHHH--H---H-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec-----ceEEEEEEe
Confidence 123333333333444443 2 1 4455666666666666644 3321 1211 223444333
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. +.. .........+.+.+.+ .||.+.+. ....+|
T Consensus 380 ~~-~~~----------~~~~~~~~~~~~~~~~-~Gil~~~~---------------------------------~~~~lr 414 (441)
T PRK05769 380 VK-DRK----------EPDPKLRDKVLYEAFK-RGLLLLGA---------------------------------GKSAIR 414 (441)
T ss_pred cc-CCc----------cccHHHHHHHHHHHHh-CCcEEecC---------------------------------CCCEEE
Confidence 32 100 0000013456666655 59887521 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++++.+|++|++++++++++++..
T Consensus 415 ~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 415 IIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 323
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=3e-11 Score=130.95 Aligned_cols=348 Identities=18% Similarity=0.164 Sum_probs=193.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|++ |+|..++ |-.++.|.+++.+++... ...+.. ...+....++.+.+.+.+..+
T Consensus 28 ~~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~lae~l~~~~~~~ 98 (425)
T PRK09264 28 AKGSWLYDEDGKE---YIDFFAGAGALNYGHNNPVLKQALIDYLQRD-GITHGL-----DMHTTAKREFLETFEETILKP 98 (425)
T ss_pred eecCEEEeCCCCE---eeecccchhhccCCCCCHHHHHHHHHHHHhc-cccccc-----ccCcHHHHHHHHHHHHhhcCC
Confidence 4456666666653 8897544 667899999999888642 122211 011234556666777765322
Q ss_pred C--CCcEEEe-CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHc---------C--
Q 038499 138 Q--EDAMIFC-GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQS---------L-- 202 (609)
Q Consensus 138 ~--~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~---------G-- 202 (609)
. ++.+.|+ .||+.+ +...+++.- .. +|.+ .|+.-...||+.. .++... +
T Consensus 99 ~~~~~~~~f~~~sGseA-~e~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~ 162 (425)
T PRK09264 99 RGLDYKVQFTGPTGTNA-VEAALKLAR-------------KV-TGRT-NIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVP 162 (425)
T ss_pred cCCCceEEEeCCCHHHH-HHHHHHHHH-------------Hh-cCCC-eEEEECCccCCccHHHHHhcCCcccccCCCCC
Confidence 1 1256664 578875 333333210 01 2322 4665555555543 222211 1
Q ss_pred -ceEEEEecCCC--C-CCCHHHHHHHHhhhccC-CCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc
Q 038499 203 -AEVVEIGLDDD--G-LLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 203 -~~vv~v~~~~~--g-~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~ 273 (609)
..+..+|.... . .-|+++|++.+.+.... +++.++++..+....|.+.+ +++|.++|++||+++|+|++++
T Consensus 163 ~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 242 (425)
T PRK09264 163 LNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA 242 (425)
T ss_pred CCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh
Confidence 13455554321 0 12678888888643211 25678889988888887653 8899999999999999999986
Q ss_pred C-Ccc----cccCCCCCCCCccEEEEcCCCCCCC-CCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 274 G-PYV----EIDVRSGQTDGYDAIFLSTHKFLGG-PGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 274 ~-~~~----~id~~~~~~~~~D~v~~S~hK~lgg-p~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
+ |-. ..+.... ..|+++++ |.+++ ...+|++++++++ . .+.+...+ ++
T Consensus 243 G~GrtG~~~~~~~~~v---~PDi~t~~--K~l~~~G~pigav~~~~~i--~-~~~~~~~~-~T----------------- 296 (425)
T PRK09264 243 GCGRTGTFFSFERAGI---TPDIVTLS--KSISGYGLPMALVLIKPEL--D-VWKPGEHN-GT----------------- 296 (425)
T ss_pred CCccccHHHHHhhcCC---CCCEEEec--cccCCCccceEEEEEchhh--h-ccCCCccC-CC-----------------
Confidence 3 111 1111111 45877665 99985 3347999998776 1 22111110 00
Q ss_pred ccccccCCChhHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceE-EEEecc
Q 038499 348 IEERESGGTPQVIQMIRAAL-AFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAIL-SFNIHS 421 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal-~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~-~f~~~~ 421 (609)
..|.|.-.....+++ .++ ..+.+.++.+++.+++.++|++ .|.+ + .. ....+.+ .+.+.+
T Consensus 297 -----~~gnp~~~aaa~a~l~~~~-----~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~-~~--vrg~Gl~~~i~l~~ 362 (425)
T PRK09264 297 -----FRGNNLAFVTATAALEEYW-----SDDAFEKEVKAKGELVRERLEEIAAKYPGL-G-AE--VRGRGMMQGIDFGD 362 (425)
T ss_pred -----CCCCHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHHHHhCCCc-e-ec--ceecccEEEEEecC
Confidence 123332222222333 222 1234556666666666666543 3322 1 11 1112333 333332
Q ss_pred CCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEe
Q 038499 422 STINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls 501 (609)
. .....+.+.+.+ .||.+.+.. . ....+|++
T Consensus 363 -~----------------~~~~~l~~~~~~-~Gv~~~~~~-------~------------------------~~~~lr~~ 393 (425)
T PRK09264 363 -G----------------ELAGKIAAEAFE-NGLIIETSG-------P------------------------EDEVVKLL 393 (425)
T ss_pred -h----------------HHHHHHHHHHHH-CCCEEeccC-------C------------------------CCCEEEEe
Confidence 1 124567777765 599886321 0 13689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 502 FPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 502 ~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+++.+|++|+++++++|+++++..
T Consensus 394 p~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 394 PPLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654
No 324
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=4.4e-11 Score=129.38 Aligned_cols=358 Identities=14% Similarity=0.068 Sum_probs=199.6
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.+.. .... ...+.+...++.+.+.+.+..+
T Consensus 33 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~ 103 (429)
T PRK06173 33 ADGVMITLKDGRR---LIDGMSSWWAALHGYNHPRLNAAATNQLAKMS-HIMF-----GGFTHEPAVELAQKLLEILPPS 103 (429)
T ss_pred ceeeEEEcCCCCE---EEEccchHHhccCCCCCHHHHHHHHHHHHhcC-Cccc-----cccCCHHHHHHHHHHHhhCCCC
Confidence 4455666666643 9997654 5677899999998886531 1111 0112344566777787777543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G-------------~ 203 (609)
-+ .|.|+.||+++ +...+++--. .. ...-+++. ..|+.-...||.. ..++...+ .
T Consensus 104 ~~-~v~f~~sGseA-ve~AlklAr~-~~-------~~~g~~~r-~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 172 (429)
T PRK06173 104 LN-KIFFADSGSVA-VEVAMKMALQ-YQ-------QAKGEVQR-TKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLP 172 (429)
T ss_pred cC-EEEEeCCchHH-HHHHHHHHHH-HH-------HHhCCCCC-cEEEEECCCcCCcchhhhccCCCchhhhhcccccCC
Confidence 33 89999888886 3322222100 00 00001333 3566656556553 22221111 1
Q ss_pred eEEEEecCCC------CCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCCeEEEeccc
Q 038499 204 EVVEIGLDDD------GLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 204 ~vv~v~~~~~------g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~A~ 272 (609)
.+..+|.... ..-+++.|++.+..+ .+++..+++... +...|.+.+ +++|.++|++||+++|+|+++
T Consensus 173 ~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~--~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~ 250 (429)
T PRK06173 173 VQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK--GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA 250 (429)
T ss_pred CCeEeCCCCcccchhHHHHHHHHHHHHHHhC--CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh
Confidence 1233332110 011466777887632 245778888875 788888755 678999999999999999998
Q ss_pred cC-Cccccc--CCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 273 SG-PYVEID--VRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 273 ~~-~~~~id--~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
.+ |...-- ....+ -..|++++ .|.++|.. .++.+++++++. +.+.+... +...
T Consensus 251 tG~GrtG~~~a~~~~g-v~PDiv~~--gK~l~gG~~p~~a~~~~~~i~--~~~~~~~~--~~~~---------------- 307 (429)
T PRK06173 251 TGFGRTGKLFALEHAG-VVPDIMCI--GKALTGGYLTLSATITTEAIA--QTICSGEA--KCFM---------------- 307 (429)
T ss_pred cCCCcCCcchHHHhcC-CCCCEEEe--ehhhhCCccccceEEecHHHH--HHHhcCCC--Cccc----------------
Confidence 53 211100 01111 14588874 69997652 468888888873 22211000 0000
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcC
Q 038499 349 EERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSL 428 (609)
Q Consensus 349 ~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~ 428 (609)
...-..|.|...+...++++.... . .+.++.+++.+++.+.|+++.+...++.. ..+..++.+.+.. .
T Consensus 308 ~~~T~~g~p~~~aaa~a~l~~i~~--~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~v-Rg~Gl~~~iel~~-~----- 375 (429)
T PRK06173 308 HGPTFMANPLACAIAAESIRLLLE--S---PWQQNIQRIEAQLKQELAPAAEFDSVAEV-RVLGAIGVVEMKE-P----- 375 (429)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHh--C---CHHHHHHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEeCC-c-----
Confidence 000012344444444555555422 1 23556666667777766543222212111 0133455555543 2
Q ss_pred CCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCH
Q 038499 429 GENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSN 508 (609)
Q Consensus 429 ~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ 508 (609)
.....+.+.|.+ .||.+++. ...+|+.+++..|+
T Consensus 376 -----------~~~~~i~~~l~e-~Gi~v~~~----------------------------------g~~l~~~Ppl~it~ 409 (429)
T PRK06173 376 -----------VNMATLQPRFVE-HGIWVRPF----------------------------------GKLVYIMPPFIISP 409 (429)
T ss_pred -----------ccHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEeCCccCCH
Confidence 134678888866 59988621 15799999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 038499 509 EEFEFTLEALEFIAIY 524 (609)
Q Consensus 509 eeid~ll~al~~v~~~ 524 (609)
+|+++++++|++++..
T Consensus 410 ~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 410 DELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 325
>PRK12403 putative aminotransferase; Provisional
Probab=99.51 E-value=6.2e-11 Score=129.42 Aligned_cols=229 Identities=17% Similarity=0.056 Sum_probs=132.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++..... .. ...........++.++++++++..
T Consensus 43 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~---~~--~~~~~~~~~~~~lae~L~~~~p~~ 114 (460)
T PRK12403 43 GEGLHLWDNDGK---RYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY---YN--MFFHTTHPAVIELSELLFSLLPGH 114 (460)
T ss_pred ceeeEEEeCCCC---EEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC---ee--cccccCCHHHHHHHHHHHHhCCCC
Confidence 556677777765 49996543 56778999999998875311 10 000112345667888888888744
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCC-CccchHHHHHHcCce-----------E
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPH-EHHSNLLSWRQSLAE-----------V 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~-~h~s~~~~~~~~G~~-----------v 205 (609)
-+ .++|+.||+++.-. .+++.-. .. . ..=++++ .+|+.-.. .|.+....+...|.+ +
T Consensus 115 ~~-~v~f~~SGseA~e~-AiklAr~-~~---~----~~g~~~r-~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~ 183 (460)
T PRK12403 115 YS-HAIYTNSGSEANEV-LIRTVRR-YW---Q----VLGKPQK-KIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDV 183 (460)
T ss_pred cC-EEEEeCCcHHHHHH-HHHHHHH-HH---H----hhCCCCC-cEEEEECCCcCcccHhhhhcCCCccccccCCCCCCC
Confidence 33 78998888886333 3332200 00 0 0002222 24444333 355544444433322 2
Q ss_pred EEEecCCC----CC--------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEe
Q 038499 206 VEIGLDDD----GL--------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFD 269 (609)
Q Consensus 206 v~v~~~~~----g~--------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD 269 (609)
..++.... .. .++++|++.+.+ ...+++..|++..+....|.+.| +++|.++|++||+++|+|
T Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~-~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~D 262 (460)
T PRK12403 184 AHIDEPYWYANGGELTPAEFGRRAALQLEEKILE-LGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCAD 262 (460)
T ss_pred EEeCCCcccccccCCChHHHHHHHHHHHHHHHHH-hCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 33331110 01 113556666542 11245678889988888899888 899999999999999999
Q ss_pred ccccCC-cccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechh
Q 038499 270 FAASGP-YVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKAL 315 (609)
Q Consensus 270 ~A~~~~-~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~ 315 (609)
+++++- -... -....+. ..|++++ .|.+||.. .+|.+++++++
T Consensus 263 EV~tGfGRtG~~~a~e~~gv-~PDiv~~--gK~lggG~~Piga~v~~~~i 309 (460)
T PRK12403 263 EVIGGFGRTGEWFAHEHFGF-EPDTLSI--AKGLTSGYVPMGGLVLSKRI 309 (460)
T ss_pred ccccCCCcCchhhhhhhcCC-CCCeEEE--cccccccccceEEEEECHHH
Confidence 998532 2111 0111111 3588875 59998653 57888888887
No 326
>PRK07678 aminotransferase; Validated
Probab=99.51 E-value=4.8e-11 Score=130.06 Aligned_cols=370 Identities=12% Similarity=0.088 Sum_probs=197.7
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++......+. . ...+...++.+.|.++++..
T Consensus 36 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---~----~~~~~~~~lae~l~~~~~~~ 105 (451)
T PRK07678 36 AEGAWVTDIQGN---RYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL---T----QSHEPAIKLAEKLNEWLGGE 105 (451)
T ss_pred eeeeEEEeCCCC---EEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc---c----cCCHHHHHHHHHHHHhCCCC
Confidence 445666666664 38997654 66778999999888865311111 0 11234556777888887653
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~~ 204 (609)
+.+.|+.||+.+.-.++-.+.... . ..=+++. ..|+.-...||+.. .+....+ ..
T Consensus 106 --~~v~f~~sGseA~e~AlklAr~~t------~---~~g~~~r-~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 173 (451)
T PRK07678 106 --YVIFFSNSGSEANETAFKIARQYH------A---QKGEPHR-YKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPG 173 (451)
T ss_pred --CEEEEeCCcHHHHHHHHHHHHHHH------H---hcCCCCC-cEEEEECCCcCCccHHHhhcCCCcccccccCCCCCC
Confidence 379999888886322221111100 0 0001233 35665555555533 2222111 12
Q ss_pred EEEEecCCCCCC---------C---HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDDDGLL---------D---IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~~g~l---------d---~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..++....... | ++.+++.+.. ...+++..+++..+....|.+.| ++++.++|++||+++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~ 252 (451)
T PRK07678 174 FLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW-ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLIS 252 (451)
T ss_pred CEEeCCCccccccccCChHHHHHHHHHHHHHHHHh-cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 333332211111 1 2335666642 11246778888888888888876 78899999999999999
Q ss_pred ecccc-CCccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 269 DFAAS-GPYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 269 D~A~~-~~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
|+++. ++-.. .-....+ -.+|+++++ |.+||. ..+|.+++++++. +.+.+... .+.+.
T Consensus 253 DEV~tGfGRtG~~~~~~~~g-v~PDivt~g--K~lggG~~Pi~av~~~~~i~--~~~~~~~~-~~~~~------------ 314 (451)
T PRK07678 253 DEVICGFGRTGKAFGFMNYG-VKPDIITMA--KGITSAYLPLSATAVKKEIY--EAFKGKGE-YEHFR------------ 314 (451)
T ss_pred eehhhcCCcCchhHHHHhcC-CCCCEEEee--cccccCCcceeEEEEcHHHH--HHHhccCc-ccccc------------
Confidence 99974 33221 0111111 146988875 999875 3589999999883 33322100 00000
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh----CCCCce-EEeCCCCCCCcceEEEEe
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL----LPNQNI-KILGNTSTKRQAILSFNI 419 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L----~~~p~i-~v~~~~~~~r~~~~~f~~ 419 (609)
...-..|.|-..+...+.++.. +.. .+.++.+++.+++.+.| .+.+.+ ++.+ +..++.+.+
T Consensus 315 ----h~~T~~gnp~~~aaa~a~l~~l--~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg-----~Gl~~~i~~ 380 (451)
T PRK07678 315 ----HVNTFGGNPAACALALKNLEIM--ENE---NLIERSAQLGELLLEQLKEELGEHPLVGDIRG-----KGLLVGIEL 380 (451)
T ss_pred ----cCCCCCcCHHHHHHHHHHHHHH--HhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEe-----eceEEEEEE
Confidence 0001133444444445555544 222 34445555555555555 334322 1222 234444444
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. +... ......-....+...|.+ .||.+.+.. |.... ....+|
T Consensus 381 ~~-~~~~-------~~~~~~~~a~~i~~~l~~-~Gv~~~~~g----~~v~~-----------------------~~~~lr 424 (451)
T PRK07678 381 VN-DKET-------KEPADNDKVASVVAACKE-KGLIIGKNG----DTVAG-----------------------YNNVLT 424 (451)
T ss_pred ec-CCcc-------cCcCchHHHHHHHHHHHH-CCcEEeecC----ccccC-----------------------CCCEEE
Confidence 32 1000 000000113466777766 599886310 10000 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++++.+|++|++++++++++++..
T Consensus 425 l~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 425 LSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865
No 327
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.50 E-value=9.9e-11 Score=127.88 Aligned_cols=359 Identities=15% Similarity=0.134 Sum_probs=188.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++.... +... .........++.+.|.+++...
T Consensus 43 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~---~~~~~~~~~~la~~L~~~~p~~ 113 (451)
T PRK06918 43 ANGALVTDVDGN---QYIDFAGAIGTINVGHSHPKVKEALHKQVDQYI---HTGF---NVMMYEPYIELAEKLAALAPGS 113 (451)
T ss_pred ccccEEEeCCCC---EEEEcCCchhhcCCCCCCHHHHHHHHHHHHhcc---Cccc---cccccHHHHHHHHHHHHhCCCC
Confidence 445566666664 38997654 5667899999998886531 1110 0012344567777888887643
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G-------------~ 203 (609)
..+.+.|+.|||.+ +...+++-- .. .|.+ .|+.-...||+.. ..+...+ .
T Consensus 114 ~~~~v~f~~sGseA-~e~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~ 177 (451)
T PRK06918 114 FDKKVLFLNSGAEA-VENAVKIAR-------------KY-TKRQ-GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAP 177 (451)
T ss_pred CCCEEEEcCCcHHH-HHHHHHHHH-------------HH-hCCC-cEEEECCCcCccchhhhhhcCCCccccccCCCCCC
Confidence 32389999888886 333322210 01 1222 4555555555443 2222111 1
Q ss_pred eEEEEecCC-----CCCC-------CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 204 EVVEIGLDD-----DGLL-------DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 204 ~vv~v~~~~-----~g~l-------d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
.+..+|... .+.. .++.+++.+......+++..+++...+...|.+.+ +++|.++|++||+++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI 257 (451)
T PRK06918 178 EVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFV 257 (451)
T ss_pred CcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 133333221 1110 02234443321111245667778777766787655 6789999999999999
Q ss_pred EeccccCC-ccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 268 FDFAASGP-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 268 vD~A~~~~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
+|+++... ... ..+.... ...|++ ++.|.+++...+|++++++++ .+.+.+...+ ++
T Consensus 258 ~DEV~tg~gr~g~~~a~~~~~-v~pDi~--t~sK~l~~G~pig~v~~~~~i--~~~~~~~~~~-~T-------------- 317 (451)
T PRK06918 258 ADEIQTGFARTGKYFAIEHFD-VVPDLI--TVSKSLGAGVPISGVIGRKEI--MDESAPGELG-GT-------------- 317 (451)
T ss_pred EeccccCcCccCceehhHhcC-CCCCEE--eeehhhcCCCccEEEEEcHHH--HhccCCCCcC-cC--------------
Confidence 99996532 222 1111111 125755 567999865668999999888 3443222110 00
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEec
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~ 420 (609)
..+.|-......+++++. +. +.+.++.+++.+++.++|++ .|.+.-+. ....++.+...
T Consensus 318 --------~~g~~l~~aaa~a~l~~i--~~---~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr----g~G~~~~~~~~ 380 (451)
T PRK06918 318 --------YAGSPLGCAAALAVLDII--EK---ENLNDRAIELGKVVMNRFEEMKNKYNCIGDVR----GLGAMCAFELV 380 (451)
T ss_pred --------CCcCHHHHHHHHHHHHHH--HH---CCHHHHHHHHHHHHHHHHHHHHhhCCCceeec----cceeEEEEEEc
Confidence 122332233333444433 22 22334444555555555543 33221111 12334444332
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
.+... . .........+.+.+.+ .||.+.++..+ .+++|+
T Consensus 381 ~~~~~-~--------~~~~~~~~~l~~~~~~-~Gvlv~~~~~~-------------------------------~~~lrl 419 (451)
T PRK06918 381 QDRKT-K--------EPDKTLTANICKEANK-RGLLLLSAGTY-------------------------------GNVIRV 419 (451)
T ss_pred cCCCc-C--------CCcHHHHHHHHHHHHH-CCeEEeecCCC-------------------------------CCEEEE
Confidence 10100 0 0000113445555555 69998754211 268999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++++..|+++++.++++|++++...
T Consensus 420 ~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 420 LMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHHH
Confidence 9988889999999999999988653
No 328
>PRK06062 hypothetical protein; Provisional
Probab=99.50 E-value=8.3e-11 Score=128.11 Aligned_cols=351 Identities=15% Similarity=0.081 Sum_probs=194.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... ..+.. ...+...++.+.|.+....+
T Consensus 42 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~~~~------~~~~~~~~lae~L~~~~p~~ 111 (451)
T PRK06062 42 AEGSYVWDYEGR---RYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC-TVAPA------HANDARSEAARLIAERAPGD 111 (451)
T ss_pred ceeeEEEECCCC---EEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcC-CcCCc------cCCHHHHHHHHHHHHhCCCC
Confidence 344555555554 49998654 5667899999998886531 11110 12344566777787877543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc-----------eE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA-----------EV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~-----------~v 205 (609)
-+ .|.|+.||+.+ +...+++-. .. .| |..|+.-...||... ......+. .+
T Consensus 112 ~~-~v~f~~SGsEA-ve~AlklAr-------------~~-tg-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 174 (451)
T PRK06062 112 LS-KVFFTNGGADA-NEHAVRMAR-------------LH-TG-RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGV 174 (451)
T ss_pred CC-EEEEcCChHHH-HHHHHHHHH-------------Hh-hC-CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCC
Confidence 33 89999888885 333333211 01 23 224655555555443 33322211 12
Q ss_pred EEEecCCCCC------CC-------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 206 VEIGLDDDGL------LD-------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 206 v~v~~~~~g~------ld-------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
..++...... -| +++|++.++.. ..+++..|++..+....|.+.| +++|.++|++||+++|+
T Consensus 175 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~ 253 (451)
T PRK06062 175 VHFFGPFLYRSEFHATTEEEECERALAHLERVIELE-GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIA 253 (451)
T ss_pred EEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEe
Confidence 2232211110 12 67788888531 1145778899999888899988 89999999999999999
Q ss_pred eccccCCcccccC---CCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCc-cCCCceEeeccccccccc
Q 038499 269 DFAASGPYVEIDV---RSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPST-CGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 269 D~A~~~~~~~id~---~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~-~ggg~v~~~~~~~~~~~~ 343 (609)
|+++++....-.+ .... -.+|++++ .|.+||.. .+|.+++++++ .+.+.... ..+.+
T Consensus 254 DEV~tGfGRtG~~~a~~~~g-v~PDi~t~--gK~lggG~~Pigav~~~~~i--~~~~~~~~~~~~~T------------- 315 (451)
T PRK06062 254 DEVMAGFGRTGKWFAIEHFG-VVPDLITF--AKGVNSGYVPLGGVAISEAI--AATFADRPYPGGLT------------- 315 (451)
T ss_pred eccccCCCcCcHHHHHHhcC-CCCCeeee--chhhhcCCcCcEEEEEcHHH--HHHhccCCCCCCCC-------------
Confidence 9997742111011 1111 14587766 49998742 47888889887 33332110 00111
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHHHhC----CCCce-EEeCCCCCCCcceEEE
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI-ERALERLL----PNQNI-KILGNTSTKRQAILSF 417 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~-~~~~~~L~----~~p~i-~v~~~~~~~r~~~~~f 417 (609)
..|.|...+...+.++.. +.. .+.++.+++. +++.+.|+ ..|.+ .+-+ ...++.+
T Consensus 316 ---------~~gnpl~~Aaa~a~L~~l--~~~---~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG-----~Gl~~gv 376 (451)
T PRK06062 316 ---------YSGHPLACAAAVATINAM--EEE---GIVENAARIGAEVLGPGLRELAERHPSVGEVRG-----LGVFWAL 376 (451)
T ss_pred ---------CCCCHHHHHHHHHHHHHH--Hhc---CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEec-----cccEEEE
Confidence 123444444445555544 222 2344444444 34444443 34322 2222 1223333
Q ss_pred EeccCCCCCcCCCCCCCCCCCCC--------ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 418 NIHSSTINSSLGENTKTETDKPL--------HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l--------~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
.+.. +.. ...++ ....+.+.|.+ .||.+.+.
T Consensus 377 e~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~----------------------------- 415 (451)
T PRK06062 377 ELVA-DRE----------TREPLAPYGASSAAMAAVKAACKE-RGLLPFVN----------------------------- 415 (451)
T ss_pred EEcc-ccc----------ccCCCcccchhhHHHHHHHHHHHH-CCcEEeec-----------------------------
Confidence 3322 100 00001 13456667755 58886520
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+.+|+++++.+|++|+++++++++++++..
T Consensus 416 -----~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 416 -----GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred -----CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 2579999999999999999999999988754
No 329
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.50 E-value=3.8e-11 Score=130.46 Aligned_cols=364 Identities=13% Similarity=0.061 Sum_probs=199.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++....-.+.. + ..++...++.+.+++.+...
T Consensus 35 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-----~-~~~~~~~~la~~l~~~~p~~ 105 (442)
T PRK13360 35 AKGMYYTTHDGR---RVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF-----Q-MGHPKAFELANRIAEIAPGG 105 (442)
T ss_pred eeeeEEEeCCCC---EEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC-----C-cCCHHHHHHHHHHHHhCCCC
Confidence 556677777775 39998654 677899999999888653111110 0 11233456777788877533
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHc---------C---c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQS---------L---A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~---------G---~ 203 (609)
-+ .|.|+.|||++ +...+++ .... ..-..+.|..|+.-...||.... ++... + .
T Consensus 106 ~~-~v~f~~sGseA-~e~AlklAr~~~----------~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~ 173 (442)
T PRK13360 106 LN-HVFFTNSGSES-VDTALKIALAYH----------RARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLP 173 (442)
T ss_pred CC-EEEEeCCcHHH-HHHHHHHHHHHH----------HhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCC
Confidence 33 89999888886 3332222 1100 00011123356665556665432 22111 1 1
Q ss_pred eEEEEecCCC-----CC--------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeE
Q 038499 204 EVVEIGLDDD-----GL--------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFA 266 (609)
Q Consensus 204 ~vv~v~~~~~-----g~--------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~v 266 (609)
.+..+|...+ .. -.+++|++++... ..+++.+|++..+....|.+.| +++|.++|++||+++
T Consensus 174 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~ll 252 (442)
T PRK13360 174 GVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILL 252 (442)
T ss_pred CCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 2333443211 00 0246778877531 1245678899999999999988 999999999999999
Q ss_pred EEecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 267 CFDFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 267 ivD~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
|+|+++. +|...- -..... -..|++++ .|.++|. ..+|.+++++++. +.+......+.
T Consensus 253 I~DEv~tG~GrtG~~~a~~~~g-v~PDivt~--gK~l~gG~~P~gav~~~~~i~--~~~~~~~~~~~------------- 314 (442)
T PRK13360 253 IFDEVITGFGRLGAPFAAQYFG-VTPDLLTC--AKGLTNGAIPMGAVFVSSEIH--DAFMQGPEAGI------------- 314 (442)
T ss_pred EEechhhCCCCCccchhhhhcC-CCCceeee--eeccccCccceEEEEEcHHHH--HHhhcCCcccc-------------
Confidence 9999984 432211 111110 13587765 5999753 2368888888873 22211000000
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceE-EEEecc
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAIL-SFNIHS 421 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~-~f~~~~ 421 (609)
.++ ......|.|...+...+++..+ +. +.+.++.+++.+++.+.|+++.....+++. ...+.+ .+.+.+
T Consensus 315 ~~~---~~~T~~g~pl~~aaa~a~L~~l--~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v--rG~Gl~~~~~l~~ 384 (442)
T PRK13360 315 EFF---HGYTYSGHPLACAAALATLDLY--ER---EGLLTRAARLAPYWEDALHSLRDAPHVIDI--RNLGLVGAVELAP 384 (442)
T ss_pred ccc---cCCCCCCCHHHHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHhhcCCCeeee--eccceEEEEEEec
Confidence 000 0001123344444445555544 22 235566667777777777643221111111 111222 222222
Q ss_pred CCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEe
Q 038499 422 STINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRIS 501 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls 501 (609)
.. .+..-....+...|.+ .||.++.+ ...+|++
T Consensus 385 -~~-----------~~~~~~~~~~~~~l~~-~Gvl~~~~----------------------------------~~~lr~~ 417 (442)
T PRK13360 385 -RD-----------GKPGKRAYEVFLKCFE-KGLMIRYT----------------------------------GDILALS 417 (442)
T ss_pred -CC-----------CCcchhHHHHHHHHHH-CCcEEEec----------------------------------CCEEEEe
Confidence 10 0000123466666755 59987621 2579999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Q 038499 502 FPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 502 ~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++.+|++|+|+++++|+++++.
T Consensus 418 Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 418 PPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred CCCccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 330
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.50 E-value=1.3e-11 Score=130.43 Aligned_cols=311 Identities=20% Similarity=0.204 Sum_probs=168.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
.+.+.-+.+-+....++++.|.+....-+. .|++++-..+..+.. .....+..|+++...|+.+
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdvaNaSly--d~atA~aEa~~ma~r--------------~~~~~~~~vlv~~~~hP~~ 167 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVANASLY--DGATAAAEAMLMAVR--------------ATKRKRNKVLVPESLHPQT 167 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE-SEBS--SCCHHHHHHHHHHHH--------------HHTT---EEEEETTS-CHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCC--ChhHHHHHHHHHHHH--------------hcccCCcEEEEcCCcChhh
Confidence 456677888899999999999974312223 345543333333221 1112223799999999999
Q ss_pred HHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
....+. .|++++.++.++++..| . +++..|.+.+|+ ..|.+.|+++|++++|++|+++++ +
T Consensus 168 ~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~-----~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ 232 (429)
T PF02347_consen 168 RAVLRTYAAPLGIEIVEVPLDEDGTTD--------D-----DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-G 232 (429)
T ss_dssp HHHHHHHCCHCCEEEEEE-BBTTCSB---------S-----TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-C
T ss_pred HHHHHHhhhhCCeEEEEecccccCCcc--------c-----cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-e
Confidence 875543 58999999988877766 3 688899998885 669999999999999999999887 6
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCC-----CCcEEEEEechhhccCCCCCCccCCCceEeecc-cccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP-----GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNG-FNEKDTLY 344 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp-----~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~-~~~~~~~~ 344 (609)
+.-.... + +++-...|+|+++.+ ||-||.| .+.|++.+++++ .+.++-...| -+++ .++ .......+
T Consensus 233 ad~~aL~-~-l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l--~r~lPGRiVG-~t~D-~~G~~~~~ltLq 305 (429)
T PF02347_consen 233 ADPNALG-G-LKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDL--VRQLPGRIVG-QTKD-ADGKRAFVLTLQ 305 (429)
T ss_dssp GGCCGCC-T-C--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGG--GGGS-S-EEE-EEEB-CCCSCCEEEE-G
T ss_pred cCHHHHh-C-cCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhh--hhhCCCceec-cccc-ccccceeeeccc
Confidence 5221100 0 111112288999665 7777544 127999999998 4555433222 1111 000 00001111
Q ss_pred cccccccccCCChhHH-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEe
Q 038499 345 LEDIEERESGGTPQVI-----QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~-----~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~ 419 (609)
......|.+-.|.||. -.+++++-+......|+..+.++....+.|+.++|+++.++.+.++ .++-|++
T Consensus 306 tREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~------~f~e~v~ 379 (429)
T PF02347_consen 306 TREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNP------FFFEFVV 379 (429)
T ss_dssp GGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSS------SBSSEEE
T ss_pred cccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC------Cceeeee
Confidence 1222233444555552 2223333333345678999999999999999999998744433221 3333333
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. . ....+.+ |.++ +|.-. . ...+. ..+.+-
T Consensus 380 ~~-~-----------------~~~~~~~-l~~~-~~~~g--l------~~~~~---------------------~~~~~l 410 (429)
T PF02347_consen 380 VF-S-----------------KDKEVEE-LLKR-GIEGG--L------NLRYP---------------------DDGALL 410 (429)
T ss_dssp EE-S-----------------S-HHHHH-HHHT-T------E------EEGGG----------------------SSEEE
T ss_pred ec-C-----------------CcHHHHH-HHHH-HHhcC--C------Ccccc---------------------CCCeEE
Confidence 33 1 1123333 3332 33221 0 00010 146899
Q ss_pred EecCCCCCHHHHHHHHHHH
Q 038499 500 ISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al 518 (609)
+++.--.|++|+|++++++
T Consensus 411 i~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 411 ICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EE--TT--HHHHHHHHH--
T ss_pred EEccCCCCHHHHHHHHhcC
Confidence 9999999999999999874
No 331
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.49 E-value=1.6e-11 Score=130.18 Aligned_cols=361 Identities=19% Similarity=0.178 Sum_probs=220.4
Q ss_pred ccCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeC-ChHHH---HHHHHHHHhcccchhhHHHHHHhhhcCC
Q 038499 105 YGNTHTCDS-YVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCG-SGTTA---AIKRLQEVMGIAVPSILREKLIKCLRDE 179 (609)
Q Consensus 105 ~~n~~~~~~-~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~-sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~g 179 (609)
++|.|.-.- ....+..++..++++.+.+..|.+ .+.|.+ +|+.. ++..+ ++... .-..|
T Consensus 565 fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~~I-RaY~~------------~kge~ 628 (1001)
T KOG2040|consen 565 FANIHPFAPVEQAQGYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLRVI-RAYLE------------SKGEG 628 (1001)
T ss_pred hccCCCCCchHHHhhHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHHHH-HHHHH------------hccCC
Confidence 456665321 123345678888999999999985 556654 34433 33322 22210 12456
Q ss_pred CceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccccc-CHHHHHHH
Q 038499 180 ERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS-DTRSIARL 258 (609)
Q Consensus 180 d~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~-dl~~I~~l 258 (609)
-|.+.+++-..|..|-.++.+.|.+|+.|..+.+|.+|+.+|+++.+++. ++...+.++.|++. |+.. .+++++++
T Consensus 629 hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~--~~Laa~MvTYPST~-GvfE~~i~d~cd~ 705 (1001)
T KOG2040|consen 629 HRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHK--DNLAALMVTYPSTH-GVFEEGIDDICDI 705 (1001)
T ss_pred cceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhh--hhhheeEEeccccc-ccccccHHHHHHH
Confidence 67789999999999999999999999999999999999999999988643 45667788888755 7774 59999999
Q ss_pred HHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC-----CCcEEEEEechhhccCCCCCCccCCCceEe
Q 038499 259 LHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP-----GSPGILLMTKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 259 a~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp-----~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
.|+||.-+..|+|.--..+.+ .+++ .-|.|+.-+..||.|.-| .|.|-+.+++.+. |..++...|..
T Consensus 706 iHehGGQVYlDGANMNAqVGl-c~pG-d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLa------pfLP~HpVvs~ 777 (1001)
T KOG2040|consen 706 IHEHGGQVYLDGANMNAQVGL-CRPG-DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA------PFLPSHPVVSP 777 (1001)
T ss_pred HHhcCCEEEecCCCccceecc-cCCc-cccccceeecccceeeecCCCCCCCCCccchhhhcc------ccCCCCCccCC
Confidence 999999999999843322222 1121 227899999999998322 3467788887772 22222111100
Q ss_pred ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA 413 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~ 413 (609)
. ..+++.-... -..--.|+..|+.+..+-+.+. ...|...--+-..-+++|+.++|+..-.+-..+.. ..-.-
T Consensus 778 ~---~~~~~~~~gs-VsaaP~Gsa~ILpISwaYikmM--G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~-~~vaH 850 (1001)
T KOG2040|consen 778 G---RPEDTSPVGS-VSAAPWGSALILPISWAYIKMM--GSGGLKDASKIAILNANYMAKRLESHYKILFRGEN-GLVAH 850 (1001)
T ss_pred C---CCCCCCCccc-eeccCCCcceeehhHHHHHHHh--cccccchhhHHHhhhhHHHHHHHhhccceeEecCC-cceee
Confidence 0 0000000000 0001124444555444444443 34455444444455688999999875333222221 11111
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
-|.+...+ -. ....+...+|+++|.| ||+-.-.-+. |
T Consensus 851 EFIlD~r~-fK-----------~~agieavDvAKRL~D-YgFHaPTmsw---P--------------------------- 887 (1001)
T KOG2040|consen 851 EFILDLRP-FK-----------KTAGIEAVDVAKRLMD-YGFHAPTMSW---P--------------------------- 887 (1001)
T ss_pred eeeeechh-hc-----------cccCCcHHHHHHHHHh-ccCCCCcccc---c---------------------------
Confidence 12222222 11 1234788999999987 7876543221 1
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHh------c--------ccccCCCcccccCCcee
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIY------G--------QRFLPLYNFNIKTGTWC 542 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~------~--------~~~~p~y~~~~~~~~w~ 542 (609)
-+|.+-|-..-.-+.+|+|++++++..+-++ | .++.|.-.-+..+..|-
T Consensus 888 V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~~~~v~s~~Wd 950 (1001)
T KOG2040|consen 888 VAGTLMIEPTESEDKAELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHPLEDVTSDNWD 950 (1001)
T ss_pred cCCceEeccCccccHHHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCCHHHhhhhccC
Confidence 1467777777777899999999999776543 2 13556666667777776
No 332
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=2.6e-11 Score=119.83 Aligned_cols=343 Identities=19% Similarity=0.210 Sum_probs=220.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhH-HHHHHHHHHHHHHHHHhCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQ-HTTNMVHEASNYIKKCLGG 136 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~-~~~~~~~e~r~~ia~~~g~ 136 (609)
+.+.++.+|-|++ |+|+-+. |-+.+.|.+++++.....+- .++ -..+...+..+.+.+++|.
T Consensus 48 a~g~~vwD~eGk~---ylDflsaysaVnqGhchpki~~aLqeq~~kLtl--------ssrafYnd~~~~f~~~vt~lf~~ 116 (427)
T KOG1402|consen 48 AKGSRVWDPEGKE---YLDFLSAYSAVNQGHCHPKIIKALQEQADKLTL--------SSRAFYNDVLGEFAEYVTKLFGY 116 (427)
T ss_pred cCCcEEECCCccc---hhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhh--------hhHHHhhhhHHHHHHHHHHhcCc
Confidence 5668888998875 7776533 56789999999988875421 122 1356678889999999999
Q ss_pred CCCCcEEEeCChHHHHHHHH---HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH----------HHHHHcCc
Q 038499 137 GQEDAMIFCGSGTTAAIKRL---QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL----------LSWRQSLA 203 (609)
Q Consensus 137 ~~~~~vift~sGttaal~~l---~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~----------~~~~~~G~ 203 (609)
+ .|+-+.+|+.+ ...+ ++-++... +.+ |.++..|+.....+|+-. .+|+..|-
T Consensus 117 ~---kvlpmnTGaEa-~Eta~KLaR~wgy~~---------K~i-p~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp 182 (427)
T KOG1402|consen 117 D---KVLPMNTGAEA-VETACKLARKWGYRK---------KNI-PKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGP 182 (427)
T ss_pred c---eeeecccchhH-HHHHHHHHHHHHHhh---------ccC-CccceeEEEecccccCceeeeEEecCCcchhhccCC
Confidence 5 67777778664 3333 33333211 112 333334554444444321 24544442
Q ss_pred ----eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCC
Q 038499 204 ----EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 204 ----~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~ 275 (609)
.+..||.+ |.++|+.+|++ ++...+.+...+..-|++.| ++++.++|.+|++++|.|+.|.+-
T Consensus 183 ~~P~~~~~v~Y~-----d~eale~~l~~----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl 253 (427)
T KOG1402|consen 183 FLPGVVDKVPYG-----DAEALEVALKS----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGL 253 (427)
T ss_pred CCCCcceeeccC-----CHHHHHHHhcC----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcc
Confidence 24455554 89999999986 67888999999999999987 788999999999999999998753
Q ss_pred ccc-----ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 276 YVE-----IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 276 ~~~-----id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
... .|.... ..|++++. |.++|. .....++..+++ ...++|...|...
T Consensus 254 ~RTGk~la~d~env---~PDivilg--KalSGG~~Pvsavl~~~~i--m~~~~pgeHgsTy------------------- 307 (427)
T KOG1402|consen 254 ARTGKLLACDYENV---RPDIVILG--KALSGGVYPVSAVLADDDI--MLNIKPGEHGSTY------------------- 307 (427)
T ss_pred cccCcEEEeehhhc---CCCeEEEe--ccccCCeeeeEEEEecHHH--HhccCCCcccccc-------------------
Confidence 322 233222 56999886 888543 446777778888 4456665443222
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce--EEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI--KILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i--~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
.|.|--....-|+++.. -.+.+.++...+.+.++.+|.+++.= .++... ..|.-+....+.+ .
T Consensus 308 ----ggNpLg~~vaiAalevi-----~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~V-RGrGl~~ai~i~~-~---- 372 (427)
T KOG1402|consen 308 ----GGNPLGCAVAIAALEVI-----VEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEV-RGRGLLNAIVINP-S---- 372 (427)
T ss_pred ----CCChHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccccccchhhee-eccceEEEEEecc-c----
Confidence 23333333334555544 34678889999999999999876421 011111 1132333333433 1
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
.....+..+++-.|.+ .|..+. |+ | ...||++.+..++
T Consensus 373 --------~~~~~~aw~~cl~lk~-~g~LAk-------pt-H-------------------------~~IiRfaPPL~I~ 410 (427)
T KOG1402|consen 373 --------KTSGQDAWDVCLALKE-NGLLAK-------PT-H-------------------------GNIIRFAPPLVIS 410 (427)
T ss_pred --------cccchhHHHHHHcccc-cccccC-------CC-C-------------------------CCeEEecCCcccC
Confidence 1222456677777755 477665 21 2 3689999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 038499 508 NEEFEFTLEALEFIAI 523 (609)
Q Consensus 508 ~eeid~ll~al~~v~~ 523 (609)
++|++.-+++|+..+.
T Consensus 411 e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 411 EEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988753
No 333
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.48 E-value=1.7e-11 Score=124.69 Aligned_cols=317 Identities=17% Similarity=0.152 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH---hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV---MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~---l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
..+.+.++|+..++++|.+++ +|+..||.+...+.-++.. .|.... .+-|...++...+++-+.|--..
T Consensus 67 ~l~Gipe~r~l~a~llgv~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~-------~~PW~~~~~vKfLCPvPGYDRHF 138 (425)
T PF12897_consen 67 GLDGIPEARELFAELLGVPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGS-------ETPWCKEEKVKFLCPVPGYDRHF 138 (425)
T ss_dssp -SS--HHHHHHHHHHHTS-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT--------SS-GGGSS--EEEEEES--HHHH
T ss_pred ccCChHHHHHHHHHHhCCCHH-HEEEeccchHHHHHHHHHHHHhcCCCCC-------CCCchhccCceEEecCCCchHHH
Confidence 345588999999999999998 8998877666544433221 121100 01133445557888888887777
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce-EEEEecccCccccccCHHHHHHHHH----HhCCeEEEec
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI-LGSFSACSNVTGIYSDTRSIARLLH----QYGGFACFDF 270 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~-lv~~s~~sn~TG~~~dl~~I~~la~----~~g~~vivD~ 270 (609)
..++..|++.+.||++++| .|++.+++.+.++ +..| +.++.--+||||+++.-+-+.+++. ..+..++||.
T Consensus 139 ai~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D---~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN 214 (425)
T PF12897_consen 139 AITEHFGIEMIPVPMTEDG-PDMDMVEELVAED---PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN 214 (425)
T ss_dssp HHHHHCT-EEEEEEEETTE-E-HHHHHHHTHTS---TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred HHHHhhCcEEEecCCCCCC-CCHHHHHHHHhcC---CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence 8888999999999999988 6999999998653 5667 8888999999999998666666653 4689999999
Q ss_pred cccCCcccccC--CC----------CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccc
Q 038499 271 AASGPYVEIDV--RS----------GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 271 A~~~~~~~id~--~~----------~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
|+++-+..-+. .. .+..+.-+++.|.+|.-....|++++..+++. +..+...
T Consensus 215 AY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~N--l~~~~~~-------------- 278 (425)
T PF12897_consen 215 AYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEAN--LAWIKKH-------------- 278 (425)
T ss_dssp TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHH--HHHHHHH--------------
T ss_pred CceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHH--HHHHHHH--------------
Confidence 98875541111 10 01123457788999998755678898888776 2221100
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHH--------HHHHHHHhC-CCCceEEeCCCC
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEETY--------IERALERLL-PNQNIKILGNTS 408 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~~l--------~~~~~~~L~-~~p~i~v~~~~~ 408 (609)
-.....| |+-+..++-+ .|+ ++.. |++.-.+++.++ .+.+.+.|. .. ++--+..+
T Consensus 279 ----------~~~~tIg-pdKvNQLRHv-rff-~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P- 343 (425)
T PF12897_consen 279 ----------LSVQTIG-PDKVNQLRHV-RFF-KDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKP- 343 (425)
T ss_dssp ----------HHHH-S----HHHHHHHH-HHH-HSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE----
T ss_pred ----------hcCceeC-ccHHHHHHHH-HHh-cChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCC-
Confidence 0001112 2222222322 222 2333 443333332222 334455565 32 34333321
Q ss_pred CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhh
Q 038499 409 TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQK 488 (609)
Q Consensus 409 ~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~ 488 (609)
...-+++|.+.+ + ....++++..+ .||.+.+-.+.- ||+...
T Consensus 344 -~GGYFIsld~~~-G-----------------~AkrvV~lake-AGV~LT~AGAtf-Pyg~DP----------------- 385 (425)
T PF12897_consen 344 -KGGYFISLDVLD-G-----------------TAKRVVELAKE-AGVALTPAGATF-PYGKDP----------------- 385 (425)
T ss_dssp -SBSS-EEEEEST-T------------------HHHHHHHHHH-TTEE---TTTTS-GGG--T-----------------
T ss_pred -CCceEEEEecCC-C-----------------hHHHHHHHHHH-hCceeCCCCCCC-CCCCCC-----------------
Confidence 234567787877 3 47888888855 699998733333 677643
Q ss_pred CCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 489 GYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 489 ~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.+..|||+.. |-+.+|++..++.+.-.+
T Consensus 386 -----~D~nIRiAPS-~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 386 -----RDSNIRIAPS-YPSLEELETAMDVFATCV 413 (425)
T ss_dssp -----TS-EEEE--S-SS-HHHHHHHHHHHHHHH
T ss_pred -----CCCcEEecCC-CCCHHHHHHHHHHHHHHH
Confidence 2478999986 468999999888876654
No 334
>PRK07482 hypothetical protein; Provisional
Probab=99.47 E-value=1.1e-10 Score=127.43 Aligned_cols=367 Identities=15% Similarity=0.083 Sum_probs=198.6
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... ..+.. ....++...++.+.|.+.+..+
T Consensus 39 a~G~~l~D~dG~~---ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~-~~~~~----~~~~~~~~~~lAe~L~~~~p~~ 110 (461)
T PRK07482 39 GEGIRITDAQGRR---YIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA-YYHTY----VGHGTEASITLSKRIIDRAPAG 110 (461)
T ss_pred eeeeEEEECCCCE---EEEcccchhhhcCCCCCHHHHHHHHHHHHhcC-ccccc----cccCCHHHHHHHHHHHHhCCCC
Confidence 5556777777753 9998766 5667899999999887531 11110 0112345566777788877543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-H--------HH-cC---ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-W--------RQ-SL---AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~--------~~-~G---~~ 204 (609)
-+ .+.|+.|||++ +...+++.-. .. ...-.++ |..|+.-...||..... . +. .+ ..
T Consensus 111 ~~-~v~f~~sGSEA-ve~AlKlAr~-~~-------~~~g~~~-r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~ 179 (461)
T PRK07482 111 MS-KVYYGLSGSDA-NETQIKLVWY-YN-------NVLGRPE-KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIAR 179 (461)
T ss_pred cC-EEEEeCchHHH-HHHHHHHHHH-HH-------HhcCCCC-CceEEEecCccCCccHhhhhccCCchhhhccCCCCCC
Confidence 33 89999888886 3333332200 00 0000122 33566666666653321 1 11 01 12
Q ss_pred EEEEecCC--C----C-------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDD--D----G-------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~--~----g-------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++... . + .-++++|++.+.+. ..+++..|++..+....|.+.+ +++|.++|++||+++|
T Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI 258 (461)
T PRK07482 180 VLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE-GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLI 258 (461)
T ss_pred CEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc-CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEE
Confidence 22332221 1 0 01467778777421 1145778888888888888865 6789999999999999
Q ss_pred EeccccCC-ccc--ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASGP-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+. -.. .-....+ -.+|+++++ |.++|.. .+|.+++++++. +.+.......+...
T Consensus 259 ~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~--~~~~~~~~~~~~~~----------- 322 (461)
T PRK07482 259 ADEVVTGFGRLGSMFGSDHYG-IEPDLITVA--KGLTSAYAPLSGSIVGEKVW--DVLEQGSDEHGAIG----------- 322 (461)
T ss_pred EeccccCCCcCcchhhHHhcC-CCCCEEEEc--cccccCccccceeeecHHHH--HHHhcccccCCccc-----------
Confidence 99996642 211 0011110 145999986 9997753 578888888873 22211000000000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCce-EEeCCCCCCCcceEEEE
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL----PNQNI-KILGNTSTKRQAILSFN 418 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i-~v~~~~~~~r~~~~~f~ 418 (609)
...-..|.|--.+...+.++.+ +. +.+.++.+++.+++.+.|. +.|.+ .+.+ +..++.+.
T Consensus 323 -----h~~T~~gnpl~~Aaa~a~L~~~--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG-----~Glm~gie 387 (461)
T PRK07482 323 -----HGWTYSGHPICAAAALANLDIL--ER---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRG-----VGMLAAVE 387 (461)
T ss_pred -----cCCCCCcCHHHHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee-----ceeEEEEE
Confidence 0000123333333334444443 22 2344455555555555554 44432 2222 22333333
Q ss_pred eccCCCCCcCCCCCCCCCCCCCC-----hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPLH-----GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
+.. +. ....+.+ ...+...+.+ .||.++.+.
T Consensus 388 l~~-~~----------~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~~-------------------------------- 423 (461)
T PRK07482 388 FVA-DR----------DDRTPFDPALKIGPQVSAAALE-RGVIARAMP-------------------------------- 423 (461)
T ss_pred ecc-CC----------CcCCCCChhhHHHHHHHHHHHH-CCcEEecCC--------------------------------
Confidence 322 10 0000111 2456666765 598876321
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
....+|+.+++.+|++|+++++++++++++..
T Consensus 424 ~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 424 HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 02579999999999999999999999988764
No 335
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.46 E-value=5.8e-11 Score=125.48 Aligned_cols=210 Identities=15% Similarity=0.143 Sum_probs=132.9
Q ss_pred CCCccccCCCCCCceEEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..+ .|-..+.|.+++.+++.... +....+ ..+...++.+.++++.+.
T Consensus 13 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~---~~~~~~----~~~~~~~la~~l~~~~~~- 81 (364)
T PRK04013 13 GEGIYVWDSQGR---RYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV---VAGPMF----EHEEKEEMLEELSKWVNY- 81 (364)
T ss_pred eecCEEEECCCC---EEEEcccChhhccCCCCCHHHHHHHHHHHHhcC---CccCCc----CCHHHHHHHHHHHhhcCC-
Confidence 455666666665 3888754 35667889999999887542 111111 134456677888888764
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH--------cCc-----e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ--------SLA-----E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~--------~G~-----~ 204 (609)
+.++|+.|||.+ +...+++.. ..+| +..|++....||+....... .+. .
T Consensus 82 --~~v~~~~SGseA-~e~Alklar--------------~~~g-r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~ 143 (364)
T PRK04013 82 --EYVYMGNSGTEA-VEAALKFAR--------------LYTG-RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPG 143 (364)
T ss_pred --CEEEEeCchHHH-HHHHHHHHH--------------HHhC-CCEEEEECCccccCchhhccCCCCcccccCCCCCCCC
Confidence 378999788775 554444432 1133 22577777767765422211 111 2
Q ss_pred EEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccccc-C---HHHHHHHHHHhCCeEEEeccccCCccc--
Q 038499 205 VVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS-D---TRSIARLLHQYGGFACFDFAASGPYVE-- 278 (609)
Q Consensus 205 vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~-d---l~~I~~la~~~g~~vivD~A~~~~~~~-- 278 (609)
+..++.+ |++++++.+. +++..+++.......|.+. | +++|.++|++||+++|+|+++++-...
T Consensus 144 ~~~~~~~-----d~~~l~~~i~-----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~ 213 (364)
T PRK04013 144 FKHIPFN-----DVEAAKEAIT-----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKF 213 (364)
T ss_pred cEEecCC-----CHHHHHHHhc-----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCch
Confidence 3333332 6888998887 5788999998888878765 4 889999999999999999997742111
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
...... .-..|+++++ |.+||...+|.++.++++
T Consensus 214 ~a~~~~-gv~PDiv~~g--K~lggG~P~~a~~~~~~~ 247 (364)
T PRK04013 214 LAIEHY-KVEPDIVTMG--KGIGNGVPVSLTLTNFDV 247 (364)
T ss_pred hHHHhc-CCCCCEEEec--ccccCCceeEEEEecccc
Confidence 011111 0145888875 999875557777777665
No 336
>PRK06105 aminotransferase; Provisional
Probab=99.45 E-value=1.2e-10 Score=127.24 Aligned_cols=373 Identities=13% Similarity=0.073 Sum_probs=200.7
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-.++.|.+++.+++... ...+.. +........++.+.|.+.+..+
T Consensus 37 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~-~~~~~~----~~~~~~~~~~lae~L~~~~p~~ 108 (460)
T PRK06105 37 GEGIYVYDDAGKR---YIEGMAGLWSVALGFSEQRLVEAAARQMKKL-PFYHTF----SHKSHGPVIDLAEKLVAMAPVP 108 (460)
T ss_pred eeEEEEEECCCCE---EEEcchhHHhccCCCCCHHHHHHHHHHHHhC-CCeecc----cccCCHHHHHHHHHHHHhCCCC
Confidence 4556666667753 9997654 456789999999988653 111110 0012344566778888887543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G------------~~ 204 (609)
-+ .|.|+.||+.+ +...+++.-. .. . .+ -.++.+ .|+.-...||+ ...++...+ ..
T Consensus 109 ~~-~v~f~~SGseA-ve~AlKlar~-~~---~---~~-g~t~r~-~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~ 177 (460)
T PRK06105 109 MS-KVFFTNSGSEA-NDTVVKLVWY-YN---N---AL-GRPEKK-KIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDR 177 (460)
T ss_pred CC-EEEEeCCcHHH-HHHHHHHHHH-HH---H---hc-CCCCCc-EEEEecCccCCcchhheeccCCcccccccCCCCCC
Confidence 33 89999888886 3333333100 00 0 00 012332 45554444544 333222111 11
Q ss_pred EEEEecCCCCC-------------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDDGL-------------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~g~-------------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++...... ..++++++.+.. ...+++..|++.......|.+.+ +++|.++|++||+++|
T Consensus 178 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~-~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI 256 (460)
T PRK06105 178 ILHTGCPHYYRFGLPGESEEAFATRLANELEALILA-EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLV 256 (460)
T ss_pred CEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHH-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEE
Confidence 22232211000 124667777742 11146778889888888899887 8999999999999999
Q ss_pred Eecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++. +|-..- -..... -.+|+++++ |.+||. ..+|.+++++++. +.+.+.....+...
T Consensus 257 ~DEv~tG~GRtG~~f~~~~~~-v~PDi~~~g--K~lggG~~P~~av~~~~~i~--~~~~~~~~~~~~~~----------- 320 (460)
T PRK06105 257 ADEVICGFGRTGNMFGCETFG-IKPDILVMS--KQLSSSYQPLSAVLMNEKVY--DPIADESGKIGTFG----------- 320 (460)
T ss_pred EeccccCCCcCchhhhHHhcC-CCCCeeeee--cccccCcccceEEEEcHHHH--HHHhcccccCcccc-----------
Confidence 999974 432210 011110 145888765 999864 2478889998873 22221100000000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
...-..|.|-......+.++... .+.+.++.+++.+++.+.|+++....+++.. ..+..++.+.+.. +
T Consensus 321 -----h~~T~~gnpl~~aaa~a~L~~i~-----~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~-~ 388 (460)
T PRK06105 321 -----HGFTASGHPVAAAVALENLAIIE-----ERDLVGNAAERGARLQARLRALADHPLVGEV-RGVGLIAAVELVA-D 388 (460)
T ss_pred -----cCCCCCCCHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHhhcCCCeEEE-EecceEEEEEEec-C
Confidence 00011234444444445555542 2245566666677776666554221111110 0122333333322 1
Q ss_pred CCCcCCCCCCCCCCCCC----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 424 INSSLGENTKTETDKPL----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. .+..+. ....+...+.+ .||.+.+. .+.+|
T Consensus 389 ~~---------~~~~~~~~~~~a~~i~~~~~~-~Gvl~~~~----------------------------------g~~i~ 424 (460)
T PRK06105 389 KA---------TKTPFEPPGKVGARANAAAHE-HGVISRAM----------------------------------GDTLA 424 (460)
T ss_pred cc---------cCCCCCchhHHHHHHHHHHHH-CCeEEEec----------------------------------CCEEE
Confidence 00 000000 12356666655 58887621 15799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhcccc
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIYGQRF 528 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~~~~~ 528 (609)
+++++..|++|++++++++.++++....+
T Consensus 425 l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 425 FCPPLIITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998776543
No 337
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=3.7e-10 Score=123.06 Aligned_cols=361 Identities=16% Similarity=0.160 Sum_probs=197.0
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... ..... + .......++.+.+.+.++..
T Consensus 43 a~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~----~-~~~~~~~~lAe~L~~~~p~~ 113 (453)
T PRK06943 43 GEGAWLYDRDGRR---YLDAISSWWVNLFGHANPRINAALKDQLDTLE-HAMLA----G-CTHEPAIELAERLAALTGGT 113 (453)
T ss_pred cccCEEEeCCCCE---EEEcchHHHHhcCCCCCHHHHHHHHHHHHhcC-Ccccc----c-cCCHHHHHHHHHHHHhCCCC
Confidence 5566677777753 9998654 6678999999999886531 11110 0 11234456777777777643
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~~ 204 (609)
-+ .+.|+.+||.+ +...+++-- .. +..+ -.++ +..|+.-...||+.. .++...| ..
T Consensus 114 ~~-~v~f~~sGseA-ve~AlKlA~-~~---~~~r----g~~~-r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~ 182 (453)
T PRK06943 114 LG-HAFFASDGASA-VEIALKMSF-HA---WRNR----GRGD-KREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRH 182 (453)
T ss_pred CC-EEEEeCCCHHH-HHHHHHHHH-HH---HHHh----CCCC-CCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCC
Confidence 33 79999888886 333322210 00 0000 0123 335666666666543 2222111 12
Q ss_pred EEEEecCCC-C-----------CCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDD-G-----------LLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~-g-----------~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++.... + .-+++++++.+..+ .+++..|++.. ++...|.+.+ ++++.++|++||+++|
T Consensus 183 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI 260 (453)
T PRK06943 183 AHVVASPDARGARPGETAADVAARALADVRRLFAER--AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLI 260 (453)
T ss_pred CEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC--CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 333432211 0 01356777777632 24677888887 4777888765 6789999999999999
Q ss_pred EeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+ |-... -....+ -..|+++++ |.++|.. .+|.+++++++. +.+.+....+.
T Consensus 261 ~DEV~TG~GRtG~~fa~~~~g-v~PDivt~g--Kgl~gG~~Pi~av~~~~ei~--~~~~~~~~~~~-------------- 321 (453)
T PRK06943 261 ADEIAVGCGRTGTFFACEQAG-VWPDFLCLS--KGISGGYLPLSLVLSRDAIF--AAFYDDDVTRG-------------- 321 (453)
T ss_pred eechhhCCCCCcchhHHHhCC-CCCCeEeee--hhhccCcccceEEEEcHHHH--HhhcccCccCC--------------
Confidence 9999653 32211 001110 146999886 9998763 589999999883 33321100000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC---CCceE-EeCCCCCCCcceEEEEe
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP---NQNIK-ILGNTSTKRQAILSFNI 419 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~---~p~i~-v~~~~~~~r~~~~~f~~ 419 (609)
+. ...-..|.|--.....+.++.+ +. +.+.++.+++.+++.+.|++ .+.+. +-+ +..++.+.+
T Consensus 322 ~~---~~~T~~gnpl~~aaa~a~L~~i--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG-----~Gl~~gvel 388 (453)
T PRK06943 322 FL---HSHSYTGNPLACRAALATLDLF--AE---DDVLARNARKSARLRAALAPLAAHPQVRHLRQ-----RGTIFAFDV 388 (453)
T ss_pred cc---CCCCCCCCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEec-----cccEEEEEE
Confidence 00 0000123333333334444443 22 23445555555666655543 34432 222 223333333
Q ss_pred ccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 420 HSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
..+.. .. .-....+.+.+.+ .||.+.+. ...+|
T Consensus 389 ~~~~~-----------~~-~~~~~~i~~~~~~-~Gll~~~~----------------------------------g~~l~ 421 (453)
T PRK06943 389 ALDGD-----------AA-RTFSRRFFEAALE-RELLLRPI----------------------------------GTTVY 421 (453)
T ss_pred ccCCC-----------cc-hHHHHHHHHHHHH-CCcEEEec----------------------------------CCEEE
Confidence 32010 00 0013456666655 58887621 14689
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++++.-+|++|+++++++|+++++..
T Consensus 422 ~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 422 LMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988653
No 338
>PRK07036 hypothetical protein; Provisional
Probab=99.45 E-value=8.8e-11 Score=128.37 Aligned_cols=369 Identities=12% Similarity=0.070 Sum_probs=195.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++....-... .+....+...++.+.+.+.+..+
T Consensus 40 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-----~~~~~~~~~~~lae~L~~~~p~~ 111 (466)
T PRK07036 40 AEGIYVTDADGR---RYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTP-----FGDMTNAPAAELAAKLAELAPGD 111 (466)
T ss_pred CceeEEEECCCC---EEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccc-----ccccCCHHHHHHHHHHHHhCCCC
Confidence 445566666665 49998655 66778999999988864311110 00012334556777777776543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~~ 204 (609)
-+ .|.|+.|||++ +...+++-- ... .. + -+++ |..|+.-...||... ......+ ..
T Consensus 112 ~~-~v~f~~sGseA-ve~AlklAr-~~~---~~---~-g~t~-r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~ 180 (466)
T PRK07036 112 LN-HVFLTTGGSTA-VDSALRFVH-YYF---NV---R-GRPA-KKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDL 180 (466)
T ss_pred cC-EEEEeCCchHH-HHHHHHHHH-HHH---Hh---c-CCCC-ccEEEEEcCccCCccHhhhcccCCCcccccccCCCCC
Confidence 33 89999888885 333322210 000 00 0 0122 335665555555433 2222111 11
Q ss_pred EEEEecCCC----CCC--------CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDDD----GLL--------DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~~----g~l--------d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..++.... ... .++.+++.+.. ...+++..|++..+....|.+.| +++|.++|++||+++|+
T Consensus 181 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~ 259 (466)
T PRK07036 181 VHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS-LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYIS 259 (466)
T ss_pred cEEecCCcccccccCCChHHHHHHHHHHHHHHHHH-cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 333332210 011 13445555542 12246778899999888899887 88999999999999999
Q ss_pred eccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 269 DFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 269 D~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
|+++.+ |-.. .-+.....-.+|+++++ |.++|.. .+|.+++++++. +.+.+....+.. +
T Consensus 260 DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~Pi~av~~~~~i~--~~~~~~~~~~~~-------------~ 322 (466)
T PRK07036 260 DEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQPLGAVIISERLL--DVISGPNAKGNV-------------F 322 (466)
T ss_pred eechhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccccEEEEEcHHHH--HHHhcccCcCcc-------------c
Confidence 999753 3221 11110000145888775 9998752 479999998883 332211000000 0
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---Cce-EEeCCCCCCCcceEEEEec
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNI-KILGNTSTKRQAILSFNIH 420 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i-~v~~~~~~~r~~~~~f~~~ 420 (609)
. ...-..|.|-..+...+.++.+ + .+.+.++.+++.+++.+.|+.+ |.+ ++.+ ...++.+.+.
T Consensus 323 ~---~~~T~~gnpl~~aaa~a~Le~i--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG-----~Gl~~~ve~~ 389 (466)
T PRK07036 323 T---HGFTYSGHPVACAAALKNIEIM--E---REGLCEHVREVGPYFEERLASLRELPLVGDVRG-----DHLMACVECV 389 (466)
T ss_pred c---cCCCCCCCHHHHHHHHHHHHHH--H---hCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-----eceEEEEEEc
Confidence 0 0000123343333334444443 2 2235556666666666666443 322 1222 2233333332
Q ss_pred cCCCCCcCCCCCCCCCCCCC----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 421 SSTINSSLGENTKTETDKPL----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
. +. +.++... ....+...+.+ .||.+++. .+
T Consensus 390 ~-~~---------~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~----------------------------------~~ 424 (466)
T PRK07036 390 A-DK---------GSKALLPEDIAIGQRIDRHCQE-RGLLVRPL----------------------------------EH 424 (466)
T ss_pred c-Cc---------cccCCCCchhHHHHHHHHHHHH-CCcEEeec----------------------------------CC
Confidence 2 10 0000000 12456666655 58887621 14
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhccc
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~~~~~~ 527 (609)
.+|+++++.+|++|++++++++.++++...+
T Consensus 425 ~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 425 LCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 6899999899999999999999998877533
No 339
>PRK05965 hypothetical protein; Provisional
Probab=99.45 E-value=1.1e-10 Score=127.41 Aligned_cols=370 Identities=13% Similarity=0.045 Sum_probs=199.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++......... .+ ...+...++.+.|.+.+..+
T Consensus 35 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~-~~~~~~~~lae~L~~~~p~~ 106 (459)
T PRK05965 35 AKGATLTDASGH---QLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGY----FH-FGSEPAIRLAAKLAERAPGS 106 (459)
T ss_pred eeEeEEEECCCC---EEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccc----cc-cCCHHHHHHHHHHHhhCCCC
Confidence 445666666664 49998765 556789999999988653111110 00 11234456777777776533
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHc---------C---ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQS---------L---AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~---------G---~~ 204 (609)
.+ .+.|+.+||++ +...+++.- ... ...=+++ |..|+.-...||... .+.... + ..
T Consensus 107 ~~-~v~f~~sGSEA-ve~AlKlAr-~~~-------~~~g~~~-r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~ 175 (459)
T PRK05965 107 LN-HVYFTLGGSDA-VDSAVRFIR-HYW-------NATGRPS-KKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPW 175 (459)
T ss_pred cC-EEEEeCChhHH-HHHHHHHHH-HHH-------HhcCCCC-ccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCC
Confidence 33 89999888886 333333210 000 0000122 335665555555543 221111 1 11
Q ss_pred EEEEecCC--C--CCCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDD--D--GLLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~--~--g~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..++... . ..-| ++++++.+.+. ..+++..+++..++...|.+.| +++|.++|++||+++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~ 254 (459)
T PRK05965 176 QHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL-GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVA 254 (459)
T ss_pred CEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 23333211 0 0012 35677777531 1135678888888888888866 67899999999999999
Q ss_pred eccccCC-ccc--ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 269 DFAASGP-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 269 D~A~~~~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
|+++.+. -.. .-....+ -..|+++++ |.++|.. .+|.+++++++. +.+.+.....+.+.
T Consensus 255 DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~--~~~~~~~~~~~~~~------------ 317 (459)
T PRK05965 255 DEVITGFGRTGPLFACEAEG-VVPDLMTVA--KGLTSGYVPMGAVLMSDHVY--QGIADGAGAAAPVG------------ 317 (459)
T ss_pred echhccCccCchhhhHhhcC-CCCCeEEec--hhhccCCcceeEEEEcHHHH--HHHhcccccccccc------------
Confidence 9997642 221 1111111 145999886 9998763 689999999983 22211100000000
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
...-..|.|--.+...+.++.+ + .+.+.++.+++.+++.+.|+++....+++.. ..+..++.+.+.. +.
T Consensus 318 ----h~~T~~gnpl~~Aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~gie~~~-~~ 386 (459)
T PRK05965 318 ----HGYTYSAHPVSAAVGLEVLRLY--H---EGGLLANGQKAGPRFAAGLDALRAHPLVGDV-RGRGLLGALELVA-DK 386 (459)
T ss_pred ----ccCCCCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHhhccCCCEEEE-eecceEEEEEEec-cc
Confidence 0000123343333334444443 2 2345566677777777777654211111111 0122233333322 10
Q ss_pred CCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 425 NSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
. ...+. ....+...+.+ .||.+++. ....+|
T Consensus 387 ~----------~~~~~~~~~~~~~~i~~~~~~-~Gll~~~~---------------------------------g~~~i~ 422 (459)
T PRK05965 387 A----------TKTPFDAALDPADRIFDRAYA-NGLVFRAF---------------------------------GDGVLG 422 (459)
T ss_pred c----------ccCCCCchhHHHHHHHHHHHh-CCeEEEec---------------------------------CCcEEE
Confidence 0 00000 13456666655 59988621 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+++-+|++|++++++++.+++...
T Consensus 423 ~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 423 FAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 340
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=1.4e-10 Score=125.17 Aligned_cols=352 Identities=13% Similarity=0.059 Sum_probs=193.8
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++.... ..... ..+.....++.+.+.+.++..
T Consensus 29 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~ 99 (422)
T PRK05630 29 TDGVFLTLEDGS---TVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS-HVMFG-----GLTHEPAIKLTRKLLNLTDNG 99 (422)
T ss_pred ceeeEEEECCCC---EEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCC-CcccC-----CcCCHHHHHHHHHHHhhCCCC
Confidence 555666666664 49997654 6677899999999887531 11110 011234566777777776533
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------- 202 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------- 202 (609)
- +.+.|+.|||++ +...+++ .... . ..-.++ |..|+.-...||... .++...+
T Consensus 100 ~-~~v~f~~SGseA-~e~AlklAr~~~--~-------~~g~~~-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 167 (422)
T PRK05630 100 L-DHVFYSDSGSVS-VEVAIKMALQYS--K-------GQGHPE-RTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTL 167 (422)
T ss_pred c-CEEEEeCCcHHH-HHHHHHHHHHHH--H-------hcCCCC-CcEEEEECCCcCCccHHHhccCCCcccccccccccC
Confidence 3 389999899886 2222221 1100 0 000122 335666666666532 2222111
Q ss_pred ceEEEEecCCCCCCC-------HHHHHHHHhhhccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCCeEEEec
Q 038499 203 AEVVEIGLDDDGLLD-------IEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 203 ~~vv~v~~~~~g~ld-------~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~ 270 (609)
..+..+|.......+ .+++++.+. +++..+++... ....|.+.| +++|.++|++||+++|+|+
T Consensus 168 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DE 242 (422)
T PRK05630 168 PEQIFAPAPPVRGSSPQEISEYLRSLELLID-----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADE 242 (422)
T ss_pred CCCeEcCCCcccCCChHHHHHHHHHHHHHHh-----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 122334332111112 234444444 46778888874 777788754 6789999999999999999
Q ss_pred cccCCcccccCCC--CCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 271 AASGPYVEIDVRS--GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 271 A~~~~~~~id~~~--~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
++.+-...-.+-. ...-..|++++ .|.++|. ..+|++++++++. +.+.... +.+...
T Consensus 243 v~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~i~--~~~~~~~-~~~~~~--------------- 302 (422)
T PRK05630 243 IATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFMSFAATLCTDKVA--QLISTPN-GGGALM--------------- 302 (422)
T ss_pred ceeCCCcCchhhHHHhcCCCCCeeee--echhhcCccccceeeccHHHH--HHHhccC-CCCccc---------------
Confidence 9753211111100 00013588865 5999653 2368888888873 2221100 000000
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC---CCceE-EeCCCCCCCcceEEEEeccCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP---NQNIK-ILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~---~p~i~-v~~~~~~~r~~~~~f~~~~~~ 423 (609)
...-..|.|...+...++++... . +...++.+++.+++.+.|+. .|.+. +- .+..++.+.+.. +
T Consensus 303 -h~~T~~g~Pla~aaa~aaL~~l~--~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vR-----g~Gl~~~ie~~~-~ 370 (422)
T PRK05630 303 -HGPTFMANPLACAVAHASLEIIE--T---GMWRKQVKRIEAELIAGLSPLAHLPGVADVR-----VLGAIGVVEMEQ-P 370 (422)
T ss_pred -cCCCCcCCHHHHHHHHHHHHHHH--h---CcHHHHHHHHHHHHHHHHHHhhcCCCeeeee-----ccccEEEEEECC-c
Confidence 00011244545555555565542 2 13344666666666665543 33221 11 133455555543 1
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
.....+.+.+.+ .|+.+++. ...+|+.++
T Consensus 371 ----------------~~~~~~~~~~~~-~Gl~~~~~----------------------------------g~~l~~~Pp 399 (422)
T PRK05630 371 ----------------VDMEEATQAAVD-HGVWLRPF----------------------------------GRLVYVMPP 399 (422)
T ss_pred ----------------ccHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEECC
Confidence 124567777766 59988621 157899999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 038499 504 YYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~~ 524 (609)
+-.|++|+++++++|++++..
T Consensus 400 L~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 400 YITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ccCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 341
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.45 E-value=1.7e-10 Score=124.63 Aligned_cols=352 Identities=13% Similarity=0.070 Sum_probs=195.8
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++......... ....+...++.+.+++.++.+
T Consensus 32 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~------~~~~~~~~~la~~L~~~~p~~ 102 (428)
T PRK07986 32 AEGCELILADGR---RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG------GITHPPAIELCRKLVAMTPQP 102 (428)
T ss_pred eeeeEEEeCCCC---EEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc------ccCCHHHHHHHHHHHhhCCCC
Confidence 445566666664 49997654 567789999999888754211110 012234566777777777543
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------- 202 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------- 202 (609)
- +.+.|+.||+++ +...+++ .... .....+ +..|+.-...||+.. .+....+
T Consensus 103 ~-~~v~f~~SGsEA-ve~AlklAr~~~----------~~~g~~-r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 169 (428)
T PRK07986 103 L-ECVFLADSGSVA-VEVAMKMALQYW----------QAKGEP-RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYL 169 (428)
T ss_pred c-CEEEEeCCcHHH-HHHHHHHHHHHH----------HhcCCC-CcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCC
Confidence 3 389999888886 3322222 1100 000122 335666565566532 2221111
Q ss_pred ceEEEEecCCC------CCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCCeEEEecc
Q 038499 203 AEVVEIGLDDD------GLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 203 ~~vv~v~~~~~------g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~A 271 (609)
..++.++.... ..-|++++++.+... .+++.+|++... +...|.+.+ +++|.++|++||+++|+|++
T Consensus 170 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~--~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv 247 (428)
T PRK07986 170 PENLFAPAPQSRFDGEWDERDIAPFARLMAAH--RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEI 247 (428)
T ss_pred CCCEEECCCCcccchhhHHHHHHHHHHHHHhC--CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 11223332110 012567888888632 235667777764 666676533 78999999999999999999
Q ss_pred ccCCcccccC---CCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 272 ASGPYVEIDV---RSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 272 ~~~~~~~id~---~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
+.+-...-.+ .... -..|++++ .|.++|. ..+|.+++++++ .+.+.+... +. +.
T Consensus 248 ~tG~GrtG~~fa~~~~g-v~PDi~t~--gK~l~gG~~p~~av~~~~~i--~~~~~~~~~--~~--~~------------- 305 (428)
T PRK07986 248 ATGFGRTGKLFACEHAG-IAPDILCL--GKALTGGTMTLSATLTTREV--AETISNGEA--GC--FM------------- 305 (428)
T ss_pred ccCCccCCCeeeecccC-CCCCEEEe--chhhhCCcccCcchhchHHH--HHHhhcCCC--Cc--cc-------------
Confidence 7532111111 1110 13588864 6999765 357888888887 333321100 00 00
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceE-EeCCCCCCCcceEEEEeccCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIK-ILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~-v~~~~~~~r~~~~~f~~~~~~ 423 (609)
...-..|.|...+...+.++.... +.+.++.+++.+++.+.|.++ +.+. +-+ +..++.+.+.. +
T Consensus 306 -~~~T~~g~p~~~aaa~a~L~~i~~-----~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg-----~Gl~~~ve~~~-~ 373 (428)
T PRK07986 306 -HGPTFMGNPLACAVANASLSLLES-----GDWQQQVAAIEAQLREELAPLRDAPMVADVRV-----LGAIGVVETTR-P 373 (428)
T ss_pred -cCCCCCcCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEec-----cceEEEEEeCC-c
Confidence 000012444444444555555421 134556666666666666543 3321 111 22344444433 1
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
.....+.+.|.+ .||.+++. ...+|+..+
T Consensus 374 ----------------~~~~~~~~~l~~-~Gl~~~~~----------------------------------g~~i~~~Pp 402 (428)
T PRK07986 374 ----------------VNMAALQRFFVE-QGVWIRPF----------------------------------GKLIYLMPP 402 (428)
T ss_pred ----------------ccHHHHHHHHHH-CCcEEEec----------------------------------CCEEEEeCC
Confidence 134567777765 59988621 157999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 038499 504 YYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~~ 524 (609)
+..|++|+++++++|.++++.
T Consensus 403 l~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 403 YIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999998754
No 342
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.44 E-value=4.1e-13 Score=137.02 Aligned_cols=174 Identities=24% Similarity=0.251 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH---
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--- 195 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--- 195 (609)
......++++.+++++|.+ ..+|+.+||.++.-.+ +++ .+|++ .|++....|....
T Consensus 27 ~D~~~~~l~~~i~~l~g~e---~a~f~~sGT~An~~al-~~~---------------~~~~~--~vi~~~~aHi~~~E~g 85 (290)
T PF01212_consen 27 EDPTTARLEERIAELFGKE---AALFVPSGTMANQLAL-RAH---------------LRPGE--SVICADTAHIHFDETG 85 (290)
T ss_dssp SSHHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHH-HHH---------------HHTTE--EEEEETTEHHHHSSTT
T ss_pred CChhHHHHHHHHHHHcCCC---EEEEeCCCChHHHHHH-HHH---------------HhcCC--ceeccccceeeeeccc
Confidence 3566788999999999996 4468878888755444 333 25676 6888887776433
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc-cCCCceEEEEecccCcc-ccccC---HHHHHHHHHHhCCeEEEec
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK-DAKRPILGSFSACSNVT-GIYSD---TRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~-~~~~~~lv~~s~~sn~T-G~~~d---l~~I~~la~~~g~~vivD~ 270 (609)
......|++++.++.+++|.+|+++|++++.... +..++++|++++++|.. |.+.+ +++|.++||+||+.++.|+
T Consensus 86 a~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDG 165 (290)
T PF01212_consen 86 AIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDG 165 (290)
T ss_dssp HHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEE
T ss_pred hhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEeh
Confidence 2234589999999977779999999999998632 23468899999998874 77776 5678899999999999999
Q ss_pred cc---cCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 271 AA---SGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 271 A~---~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
|- +..+....++++. .++|++.+|++|.+|.|.| ++|+.+++.
T Consensus 166 ARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-avl~~~~~~ 211 (290)
T PF01212_consen 166 ARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-AVLAGNKEF 211 (290)
T ss_dssp TTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-EEEEESHHH
T ss_pred hhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-eEEEechHH
Confidence 82 2222222222221 3789999999999998886 999999986
No 343
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.44 E-value=2.4e-10 Score=123.99 Aligned_cols=201 Identities=19% Similarity=0.154 Sum_probs=123.3
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |-..+.|.+++.+++... ++.. ..++...++.+.+.+.+.. . +.+.|+.+|+.+
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~---~~~~------~~~~~~~~la~~l~~~~p~-~-~~v~f~~sGseA- 121 (428)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAITEAAENG---VLYG------TPTELEIEFAKMLKEAIPS-L-EKVRFVNSGTEA- 121 (428)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhC---CccC------CCCHHHHHHHHHHHHhCCC-C-cEEEEeCCHHHH-
Confidence 48887543 456788999998888642 1111 0123345667777777652 2 489999888886
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc-------------------eEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA-------------------EVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~-------------------~vv~v~~~~ 212 (609)
+...+++-- .. .|.+ .|+.-...||+.. ..+...+. .+..++.
T Consensus 122 ~e~AlklAr-------------~~-tgr~-~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (428)
T PRK12389 122 VMTTIRVAR-------------AY-TGRT-KIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-- 184 (428)
T ss_pred HHHHHHHHH-------------Hh-hCCC-EEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC--
Confidence 333333210 01 2322 4555555555533 33322221 1112221
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccC-CCCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDV-RSGQTD 287 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~-~~~~~~ 287 (609)
-|++++++.+.++. +++..+++....+..|.+.| +++|.++|++||+++|+|+++.+.-..... .....-
T Consensus 185 ---~d~~~l~~~l~~~~--~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv 259 (428)
T PRK12389 185 ---NDIEALKEALDKWG--DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV 259 (428)
T ss_pred ---CCHHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC
Confidence 27899999886431 45778889989999999988 899999999999999999998754111000 000001
Q ss_pred CccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 288 GYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 288 ~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
..|++++ .|.+||...+|.+++++++
T Consensus 260 ~PDivt~--gK~lggG~Pi~av~~~~~i 285 (428)
T PRK12389 260 EPDLTAL--GKIIGGGLPIGAYGGRKDI 285 (428)
T ss_pred CCCeeee--chhhcCCCceeEEeEHHHH
Confidence 4587665 5999875557888999888
No 344
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=1.2e-10 Score=127.16 Aligned_cols=367 Identities=14% Similarity=0.107 Sum_probs=196.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++..... .+. .+ ..++...++.+.|++++...
T Consensus 45 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~----~~-~~~~~~~~lae~L~~~~p~~ 115 (460)
T PRK06916 45 GEGRKLYDVNGN---EYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH-STL----LG-LANVPSILLAEKLIEVVPEG 115 (460)
T ss_pred ccccEEEeCCCC---EEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC-ccc----cc-cCCHHHHHHHHHHHHhCCCC
Confidence 445556665664 49997643 67788999999998875321 111 01 11234566777788877543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G------------~~ 204 (609)
.+ .+.|+.||+++ +...+++--. .. .. . =.++.+ .|+.-...||+... ++...| ..
T Consensus 116 ~~-~v~f~~SGseA-ve~AlklAr~-~~---~~---~-g~tgr~-~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~ 184 (460)
T PRK06916 116 LK-KVFYSDSGATA-VEIAIKMAFQ-YW---QN---K-GKPKKQ-RFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFE 184 (460)
T ss_pred CC-EEEEeCCcHHH-HHHHHHHHHH-HH---Hh---c-CCCCCc-EEEEECCcCCcccHHhHhccCCcccccccCCCCCC
Confidence 33 89999888886 3322222100 00 00 0 023333 56655555555432 222211 12
Q ss_pred EEEEecCC------CC------CCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDD------DG------LLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~------~g------~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..+|... .+ .-+++++++.++.. .+++..+++.. +....|.+.+ +++|.++|++||+++|
T Consensus 185 ~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI 262 (460)
T PRK06916 185 AIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK--HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFI 262 (460)
T ss_pred CEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC--CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 33343221 00 11356677777532 24567878877 5777788765 6789999999999999
Q ss_pred EeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+ |-... -....+ -..|+++++ |.++|.. .+|.+++++++. +.+.+.....+...
T Consensus 263 ~DEV~TG~GRtG~~~a~~~~g-v~PDiv~~g--K~l~gG~~Pi~av~~~~ei~--~~~~~~~~~~~~~~----------- 326 (460)
T PRK06916 263 TDEVATGFGRTGKMFACEHEN-VTPDIMTAG--KGLTGGYLPIAITVTTDEIY--NAFYGDYEEQKTFF----------- 326 (460)
T ss_pred eechhhCCCcCchhhHHHhcC-CCCCeeeee--hhhhcCccccceeeecHHHH--HHhhccccccCccc-----------
Confidence 9999753 21110 000010 145888764 9887663 589999999883 22211100000000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
...-..|.|-......+.++.+ + .+.+.++.+++.+++.+.|+++....+++.. ..+..++.+.+.. +
T Consensus 327 -----~~~T~~gnpl~~aaa~a~l~~l--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Glm~giel~~-~ 394 (460)
T PRK06916 327 -----HGHSYTGNPLGCAVALANLELY--E---KTNLIEQVARKTEYVATQLEDLFALKHVGDI-RQLGLMVGIELVK-N 394 (460)
T ss_pred -----cCCCCCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHhhcCCCeEEe-ecCCceeeEEeec-c
Confidence 0000123333333334444443 2 2335566667777777776554221111111 0122333333322 1
Q ss_pred CCCcCCCCCCCCCCCC---CC-hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE
Q 038499 424 INSSLGENTKTETDKP---LH-GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR 499 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~---l~-~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR 499 (609)
.. .+..+ .. ...+...+.+ .||.+.+. ...+|
T Consensus 395 ~~---------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~----------------------------------g~~l~ 430 (460)
T PRK06916 395 KE---------TKEPFEWTERVGVQVCKRSRE-LGMLTRPL----------------------------------GNTIV 430 (460)
T ss_pred cc---------cccCCCchhhHHHHHHHHHHH-CCeEEEec----------------------------------CCEEE
Confidence 00 00000 01 2456666655 59887621 25789
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 500 ISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 500 ls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+.+++.+|++|+++++++++++++.
T Consensus 431 ~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 431 FMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865
No 345
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=4.6e-10 Score=122.39 Aligned_cols=359 Identities=15% Similarity=0.062 Sum_probs=196.5
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+++.++.+..|+ -|+|..++ |-..+.|.+++.+++.... ..+.. ........++.+.+.+.++..
T Consensus 42 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~ 112 (457)
T PRK05639 42 GFGALIEDVDGN---VFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ-HSMIG-----YTHSERAIRVAEKLAEISPIE 112 (457)
T ss_pred eecCEEEeCCCC---EEEECCcCHHhhccCCCCHHHHHHHHHHHHhcc-ccccC-----ccCCHHHHHHHHHHHhhCCCC
Confidence 344455555554 48998643 5567899999998886531 11111 111234456777787877643
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL-------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G-------------~ 203 (609)
.+ .|.|+.|||.+ +...+++-- .-.|. +.|+.-...||+.. .+....+ .
T Consensus 113 ~~-~v~f~~SGsEA-~e~AlklAr--------------~~tgr-~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 175 (457)
T PRK05639 113 NP-KVLFGLSGSDA-VDMAIKVSK--------------FSTRR-PWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMP 175 (457)
T ss_pred cC-EEEEeCchHHH-HHHHHHHHH--------------HhcCC-CeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCC
Confidence 33 89999888886 333333210 01222 25666555555533 2222111 1
Q ss_pred eEEEEecCCCCC--------CCHH--------HHHHHHhhh-ccCCCceEEEEecccCccccccC----HHHHHHHHHHh
Q 038499 204 EVVEIGLDDDGL--------LDIE--------ALRSKLELY-KDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQY 262 (609)
Q Consensus 204 ~vv~v~~~~~g~--------ld~e--------~L~~al~~~-~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~ 262 (609)
.++.+|...... -+.+ .|++.+... ...+++..+++.......|.+.| +++|.++|++|
T Consensus 176 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~ 255 (457)
T PRK05639 176 NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH 255 (457)
T ss_pred CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 244555432110 1222 344444211 11256778899988888898766 67899999999
Q ss_pred CCeEEEeccccCCcccccC---CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccc
Q 038499 263 GGFACFDFAASGPYVEIDV---RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNE 339 (609)
Q Consensus 263 g~~vivD~A~~~~~~~id~---~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~ 339 (609)
|+++|+|+++.+....-.+ ...+ -.+|++++ .|.+||..++|++++++++ .+.. . + ..
T Consensus 256 g~llI~DEv~tG~GrtG~~~a~~~~g-v~PDiv~~--gK~l~gG~pi~av~~~~~i--~~~~-~---~-~~--------- 316 (457)
T PRK05639 256 GILLVMDEVQTGIGRTGKWFASEWFE-VKPDLIIF--GKGVASGMGLSGVIGRKEL--MDLT-S---G-SA--------- 316 (457)
T ss_pred CCEEEEechhhccCcCchHHHHHhcC-CCCCEEEe--chhhcCCCcceeEEehHHH--Hhhc-C---C-Cc---------
Confidence 9999999997632111111 1111 14688885 5999876667999999998 3311 1 0 00
Q ss_pred ccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC-CceEEeCCCCCCCcceEEEE
Q 038499 340 KDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN-QNIKILGNTSTKRQAILSFN 418 (609)
Q Consensus 340 ~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~-p~i~v~~~~~~~r~~~~~f~ 418 (609)
.....|.|-..+...+.++.+. .+.+.++.+++.+++++.|+++ .+..+++.. ..+..++.+.
T Consensus 317 ----------~~T~~g~p~~~aaa~a~l~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V-rG~Gl~~gve 380 (457)
T PRK05639 317 ----------LLTPAANPVISAAAEATLEIIE-----EENLLKNALKVGEFIKKRLLEMKESFEVIGDV-RGKGLMIGVE 380 (457)
T ss_pred ----------ccCCCcCHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHHHHHHhCCCEEee-ccceeEEEEE
Confidence 0001244444444445555442 2234455555666666666542 111122211 0122233333
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
+.. +.. .........+.+.+.+ .|+.+.+. +. .+..+
T Consensus 381 ~~~-~~~----------~~~~~~~~~~~~~~~~-~Gv~~~~~----g~---------------------------~~~~l 417 (457)
T PRK05639 381 IVK-ENG----------KPDPELTGKICWRAFE-LGLILPSY----GM---------------------------FGNVI 417 (457)
T ss_pred Eec-CCC----------CCCHHHHHHHHHHHHh-CCeEEeec----CC---------------------------CCCEE
Confidence 322 110 0000113456666766 59988631 00 13689
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 499 RISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 499 Rls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
|+.+++..|++|++.+++++++++....
T Consensus 418 r~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 418 RITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987754
No 346
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.44 E-value=3.9e-10 Score=122.15 Aligned_cols=355 Identities=14% Similarity=0.083 Sum_probs=191.8
Q ss_pred CccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++.+..|++ |+|..++ |-..+.|.+++.+++... ...... +. ......++.+.+.+.++..-
T Consensus 36 G~~l~d~dG~~---ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~-~~~~~~-~~----~~~~~~~la~~l~~~~~~~~- 105 (427)
T TIGR00508 36 GVELTLDDGRR---LIDGMSSWWAAIHGYNHPRLNAAAQKQIDKM-SHVMFG-GF----THKPAIELCQKLVKMTPNAL- 105 (427)
T ss_pred eeEEEeCCCCE---EEEccchHHHhcCCCCCHHHHHHHHHHHHhc-CCcccc-cc----CCHHHHHHHHHHHhhCCCCC-
Confidence 34455555643 8887643 566788999998887643 111110 01 11234556677777775433
Q ss_pred CcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc-------------e
Q 038499 140 DAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA-------------E 204 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~-------------~ 204 (609)
+.+.|+.+|+++ +...+++ +.... ..=.++. ..|+.-...||+.. ..+...+- .
T Consensus 106 ~~v~f~~sGseA-~e~AlklAr~~~~---------~~~~~~r-~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~ 174 (427)
T TIGR00508 106 DCVFLADSGSVA-VEVALKMALQYWQ---------AKGEKNR-QKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPE 174 (427)
T ss_pred CEEEEeCCcHHH-HHHHHHHHHHHHH---------hhCCCCc-cEEEEEcCCcCCccHhhhcccCCcccccccccccCCC
Confidence 389999888886 3322222 11000 0001222 24666555566543 22222121 1
Q ss_pred EEEEecCCC------CCCCHHHHHHHHhhhccCCCceEEEEecc-cCcccccc----CHHHHHHHHHHhCCeEEEecccc
Q 038499 205 VVEIGLDDD------GLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYS----DTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 205 vv~v~~~~~------g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~----dl~~I~~la~~~g~~vivD~A~~ 273 (609)
+..++.... ..-|++++++.+.+. .+++.+|++... +...|.+. .+++|.++|++||+++|+|+++.
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~--~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~t 252 (427)
T TIGR00508 175 QIFAPAPQNRFDEEWNEEAITPLAKLMELH--SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIAT 252 (427)
T ss_pred CeEcCCCCccccchhHHHHHHHHHHHHHhc--CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 112221110 011567777787632 135667788775 66666643 37889999999999999999974
Q ss_pred C-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 274 G-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 274 ~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
+ |...- -..... -..|++++ .|.++|.. .++.++.++++. +.+.....+. + . .
T Consensus 253 G~Gr~G~~~~~~~~~-v~pDi~~~--gK~l~gG~~p~~a~~~~~~~~--~~~~~~~~~~----~-----------~---~ 309 (427)
T TIGR00508 253 GFGRTGKLFACEHAG-VVPDILCV--GKALTGGYMTLSATVTTDKVA--QTISSGEAGC----F-----------M---H 309 (427)
T ss_pred CCCcCCccchhhhcC-CCCCEEEe--chhhhcCcccceEEEEcHHHH--HHHhcCCCCc----c-----------c---c
Confidence 3 22111 010111 14587775 69987653 467888887772 2222110000 0 0 0
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
..-..|.|...+.+.+++..+. . +.+.++.+++.+++.+.|+++.....++.. .....++.+.+.. +
T Consensus 310 ~~T~~g~p~~~aaa~a~l~~l~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-rg~G~~~~i~~~~-~------ 376 (427)
T TIGR00508 310 GPTFMGNPLACAVAEASLAILL--E---GEWQKQVSAIENQLKRELSPLRKNPVVKDV-RVLGAIGVVEMYK-P------ 376 (427)
T ss_pred CCCCCcCHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHhhcCCCEEeE-eccccEEEEEECC-c------
Confidence 0001234444444555555442 1 123466666777777776554211111110 1134555555543 2
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
.....+.+.|.+ .||.+.+. ...+|++++..+|++
T Consensus 377 ----------~~~~~~~~~l~~-~Gv~~~~~----------------------------------~~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 377 ----------VNVEELQKKFVE-QGVWIRPF----------------------------------GKLIYVMPPYIITTE 411 (427)
T ss_pred ----------cCHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEECCCCCCHH
Confidence 235678888866 59987621 146899999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 038499 510 EFEFTLEALEFIAIY 524 (609)
Q Consensus 510 eid~ll~al~~v~~~ 524 (609)
|++++++++++++++
T Consensus 412 ~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 412 QLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998753
No 347
>PRK06149 hypothetical protein; Provisional
Probab=99.44 E-value=6.4e-10 Score=131.90 Aligned_cols=346 Identities=14% Similarity=0.113 Sum_probs=192.1
Q ss_pred EEecCCCC----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 79 TYADHTAS----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 79 vyld~~a~----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
-|+|..++ |-..+.|.+++.+++.... ..+. . ......++.+++++++...-+ .+.|+.||+.+.-.
T Consensus 586 ~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~--~~~~---~---~~~~~~elae~L~~~~p~~~~-~v~f~~SGsEA~e~ 656 (972)
T PRK06149 586 SYLDMVNNVTVLGHGHPRLAAAAARQWSLLN--TNSR---F---HYAAVAEFSERLAALAPDGLD-TVFLVNSGSEANDL 656 (972)
T ss_pred EEEECCCCccccCCCCHHHHHHHHHHHHhcc--cccc---c---cCHHHHHHHHHHHHhCCCCcC-EEEEeCCchHHHHH
Confidence 47877643 4467889999988876432 1111 1 124556778888888843333 78999899886333
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------c-eEEEEecCC--CC---C
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------A-EVVEIGLDD--DG---L 215 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~-~vv~v~~~~--~g---~ 215 (609)
++-.+.. . .|.+ .|++-...||+.. .+....+ . .+..++... .+ .
T Consensus 657 AlklAr~--------------~-tgr~-~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~ 720 (972)
T PRK06149 657 AIRLAWA--------------A-SGRR-DVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRG 720 (972)
T ss_pred HHHHHHH--------------h-cCCC-eEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCC
Confidence 3322211 1 2322 3555554555432 2111100 0 122332221 11 1
Q ss_pred CC-----HHHHHHHHhhhc-cCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCcccc---cC
Q 038499 216 LD-----IEALRSKLELYK-DAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVEI---DV 281 (609)
Q Consensus 216 ld-----~e~L~~al~~~~-~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~i---d~ 281 (609)
.+ .+++++.++... ..+++..+++..+....|.+.+ +++|.++|++||+++|+|+++. +|-..- ..
T Consensus 721 ~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~ 800 (972)
T PRK06149 721 ADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGF 800 (972)
T ss_pred cccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhh
Confidence 12 345555553211 1245678888888888899988 8999999999999999999984 433221 11
Q ss_pred CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH
Q 038499 282 RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ 361 (609)
Q Consensus 282 ~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~ 361 (609)
...+ -.+|++++ .|.+||...+|++++++++ .+.+.+. + . + -. ...|.|-..+
T Consensus 801 e~~g-v~PDivt~--gK~lg~G~Pl~av~~~~~i--~~~~~~~---~-~-------------~----~s-T~~gnP~~~a 853 (972)
T PRK06149 801 EQQG-VVPDIITM--AKGMGNGHPLGAVITRREI--AEALEAE---G-Y-------------F----FS-STGGSPVSCR 853 (972)
T ss_pred hhcC-CCCCEEEe--cccccCCeeeEEEEEcHHH--HhhhccC---C-c-------------c----cC-CCCCCHHHHH
Confidence 1111 14688866 5999876668999999988 3333210 0 0 0 00 0134554444
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 362 MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
...+.++... .+.+.++.+++.+++++.|++ .|-+..+. .+..++.+.+.. +... ...
T Consensus 854 aala~L~~i~-----~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr----G~Gl~~gvel~~-~~~~--------~~~ 915 (972)
T PRK06149 854 IGMAVLDVLR-----EEKLQENARRVGDHLKARLEALADRHPLIGAVH----GMGLYLGVELVR-DRQT--------LEP 915 (972)
T ss_pred HHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe----ecceEEEEEEec-Cccc--------CCC
Confidence 4455555442 234555666666666666654 33221111 122233333322 1000 000
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
.......+++.|.+ .||.+.+. +. .++.+||..++.+|++|+++++++
T Consensus 916 ~~~~~~~i~~~l~~-~Gvl~~~~-------g~------------------------~~~vl~~~Ppl~it~~~id~~~~~ 963 (972)
T PRK06149 916 ATEETAAICDRLLE-LGVIMQPT-------GD------------------------HLNILKIKPPLCLDRESADFFVDM 963 (972)
T ss_pred ChHHHHHHHHHHHh-CCeEEeec-------CC------------------------CCCEEEEECCCcCCHHHHHHHHHH
Confidence 00113467777766 59988731 11 136899999999999999999999
Q ss_pred HHHHHHhcc
Q 038499 518 LEFIAIYGQ 526 (609)
Q Consensus 518 l~~v~~~~~ 526 (609)
|++++..++
T Consensus 964 l~~~l~~~~ 972 (972)
T PRK06149 964 LDRVLTEGW 972 (972)
T ss_pred HHHHHHhhC
Confidence 999987653
No 348
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.44 E-value=4.8e-10 Score=122.10 Aligned_cols=363 Identities=15% Similarity=0.117 Sum_probs=191.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... ..+. ....++...++.+.|.+++...
T Consensus 28 ~~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~ 98 (442)
T TIGR00709 28 AQGCWVTDVEGKE---YLDFLAGAGTLALGHNHPNMKQKILDYLQSGL-PLHT-----LDLTTPLKDAFIEALLNIIPKR 98 (442)
T ss_pred ccccEEEeCCCCE---EEEccccHhhhcCCCCCHHHHHHHHHHHHhcc-Cccc-----cccCcHHHHHHHHHHHHhCCCc
Confidence 5566777777753 8997644 6678899999998886421 1111 1112345566777888877532
Q ss_pred -CCCcE-EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------
Q 038499 138 -QEDAM-IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------ 202 (609)
Q Consensus 138 -~~~~v-ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------ 202 (609)
....+ +++.||+.+ +...+++-- .. .| |+.|+.-...||+.. ..+...+
T Consensus 99 ~~~~~~~f~~~sGsEA-~e~AlklAr-------------~~-tg-r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~ 162 (442)
T TIGR00709 99 KMDYKLQFPGPSGADA-VEAAIKLAK-------------TY-TG-RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLM 162 (442)
T ss_pred CCCccEEEeCCCHHHH-HHHHHHHHH-------------Hh-cC-CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCC
Confidence 11244 444578775 333333210 01 23 235666555555543 2332222
Q ss_pred ceEEEEecCCCCCC--------CHHH----HHHHHhhh-ccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCe
Q 038499 203 AEVVEIGLDDDGLL--------DIEA----LRSKLELY-KDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGF 265 (609)
Q Consensus 203 ~~vv~v~~~~~g~l--------d~e~----L~~al~~~-~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~ 265 (609)
..+..++....... +.+. +++.+... ...+++..+++..+.+..|.+.+ +++|.++|++||++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~l 242 (442)
T TIGR00709 163 PGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIK 242 (442)
T ss_pred CCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 12333433221111 1222 33333210 01135677788888888887754 67899999999999
Q ss_pred EEEeccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 266 ACFDFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 266 vivD~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
+|+|+++.+ +... ....... -..|++++ .|.+++...+|+++++++. +.+.+...+ ++
T Consensus 243 lI~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~--gK~l~~G~Pigav~~~~~~---~~~~~~~~~-~T------------ 303 (442)
T TIGR00709 243 LILDEVQAGFGRSGTMFAFEHAG-IEPDFVVM--SKAVGGGLPLAVLLIAPEF---DAWQPAGHT-GT------------ 303 (442)
T ss_pred EEEeccccCCCCCCchhHHHHcC-CCCcEEEE--cccccCCcccEEEEEchHH---hccCCCcCC-CC------------
Confidence 999999764 3221 1111111 14588885 5999875568999998774 122111110 00
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEecc
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
..|.|-......+++..+ + .+.+.++.+++.+++.+.|+++. ...+++.. ......+.+.+..
T Consensus 304 ----------~~gnpla~aaa~a~L~~i--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~Gl~~~ie~~~ 367 (442)
T TIGR00709 304 ----------FRGNQLAMVTGTEALNYW--K---DDNLAQNAQERGERITSFLDDMIKEHPCIGNV-RGRGLMQGIMIVD 367 (442)
T ss_pred ----------CCcCHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEEEcc
Confidence 123333333333444333 2 22345566666666666665421 11111111 0122333443332
Q ss_pred CCCCCcCCCCCCCCCCCC----CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 422 STINSSLGENTKTETDKP----LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~----l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
+.. +.+..... -....+...+.+ .||.+.+... ..+.
T Consensus 368 -~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~-------------------------------~~~~ 408 (442)
T TIGR00709 368 -ERQ------SKDATGAYPRDCELAAAIQGACFE-NGLLLETGGR-------------------------------EGEV 408 (442)
T ss_pred -Ccc------cccccccCCcchHHHHHHHHHHHH-CCeEEeecCC-------------------------------CCCE
Confidence 100 00000000 013456666655 5998763110 1368
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+|+.++..+|++|++++++++++++...
T Consensus 409 l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 409 FRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988764
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=4.2e-10 Score=122.85 Aligned_cols=352 Identities=14% Similarity=0.058 Sum_probs=191.5
Q ss_pred CccccCCCCCCceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED 140 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~ 140 (609)
+.++.+..|+ -|+|..+. |-..+.|.+++.+++.... +... ...++...++.+.++++++...+
T Consensus 63 G~~l~D~dG~---~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~----~~~~~~~~~lae~L~~~~p~~~~- 131 (459)
T PRK06082 63 GIYIEDVDGK---KYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLP---FSPR----RFTNETAIECAEKLTEIAGGELN- 131 (459)
T ss_pred eeEEEECCCC---EEEEcccHhhcccCCCCHHHHHHHHHHHHhCC---CccC----ccCCHHHHHHHHHHHHhCCCCCC-
Confidence 3344444443 48887632 4567889999998886531 1110 11235567788888888864333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc------------eEEEE
Q 038499 141 AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA------------EVVEI 208 (609)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v 208 (609)
.+.|+.+|+.+ +..++++.. .. .|...+|......|......+...|. .+..+
T Consensus 132 ~v~f~~sGseA-ve~AlklAr-------------~~-tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~ 196 (459)
T PRK06082 132 RVLFAPGGTSA-IGMALKLAR-------------HI-TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERI 196 (459)
T ss_pred EEEECCCcHHH-HHHHHHHHH-------------Hh-cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEe
Confidence 89999888775 443333221 01 22222444455555554444433221 12333
Q ss_pred ecCCC-----CCC------CHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccC
Q 038499 209 GLDDD-----GLL------DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 209 ~~~~~-----g~l------d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~ 274 (609)
+.... ... ++++|++.+.+. +++.+|++..+.+..+.+.| +++|.++|++||+++|+|+++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG 273 (459)
T PRK06082 197 PPAVSYRGAFPDADGSDVHYADYLEYVIEKE---GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNG 273 (459)
T ss_pred CCCcccccccCChhHHHHHHHHHHHHHHhcC---CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 32110 011 135577777532 35678888888776443455 78999999999999999999764
Q ss_pred CcccccC---CCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 275 PYVEIDV---RSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 275 ~~~~id~---~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
....-.+ ...+ -..|++++ .|.+||.. .+|.+++++++. ...... . ..
T Consensus 274 ~GRtG~~fa~e~~g-v~PDiv~~--gKgl~gG~~P~~av~~~~~i~--~~~~~~-~----------------------~~ 325 (459)
T PRK06082 274 MGRTGEWFTHQAYG-IEPDILCI--GKGLGGGLVPIAAMITKDKYN--TAAQIS-L----------------------GH 325 (459)
T ss_pred CCccchhhHhHhhC-CCCCEEEe--cccccCCCCcceEEEEcHHHH--hhccCC-C----------------------CC
Confidence 2111111 1111 14688875 59998753 478888888872 111100 0 00
Q ss_pred cccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 351 RESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 351 r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
....|.|-..+...+.++.+ +. +.+.++.+++.+++.+.|+++. ...+++.. ..+..++.+.+.. +..
T Consensus 326 ~T~~gnpl~~aaa~a~L~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rG~Gl~~~ve~~~-~~~---- 394 (459)
T PRK06082 326 YTHEKSPLGCAAALATIEVI--EQ---EGLLEKVKADSQFMRERLLEMKAKYPLIGDV-RGIGLLWGVELVT-DRH---- 394 (459)
T ss_pred CCCCcCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHhhCCCeeee-eeccceeEEEEcc-Ccc----
Confidence 01123343334444555544 21 2355566666666666665431 11111111 0122334444432 100
Q ss_pred CCCCCCCCCC--CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC
Q 038499 430 ENTKTETDKP--LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS 507 (609)
Q Consensus 430 ~~~~~~~~~~--l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t 507 (609)
.... .....+...+.+ .|+.+.+. ..+.+|++.++.+|
T Consensus 395 ------~~~~~~~~~~~~~~~~~~-~Gvl~~~~---------------------------------~~~~i~~~Ppl~it 434 (459)
T PRK06082 395 ------TKERAYDEAEAVLYRCLN-NGLSFKVS---------------------------------QGNVIQLSPPLIIT 434 (459)
T ss_pred ------ccCccHHHHHHHHHHHHh-CCCEEEec---------------------------------CCCEEEEeCCCccC
Confidence 0000 012345555655 58887621 03689999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 038499 508 NEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 508 ~eeid~ll~al~~v~~~~ 525 (609)
++|++++++++++++...
T Consensus 435 ~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 435 REELTQALAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988764
No 350
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.43 E-value=1.3e-10 Score=127.09 Aligned_cols=364 Identities=16% Similarity=0.134 Sum_probs=197.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... +.. ..+ ..++...++.+.+.+.+...
T Consensus 36 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~---~~~--~~~-~~~~~~~~lae~L~~~~p~~ 106 (466)
T PRK07030 36 GEGVWLEDFEGK---RYLDAVSSWWVNVFGHANPRINQRIKDQVDQLE---HVI--LAG-FSHEPVIELSERLVKITPPG 106 (466)
T ss_pred eeccEEEECCCC---EEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcC---Ccc--ccc-cCCHHHHHHHHHHHHhCCCC
Confidence 556667666664 49997644 5667899999998886531 110 001 12344566777788877533
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc------------e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA------------E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~------------~ 204 (609)
.+ .|.|+.||+.+ +...+++--. . ...+ -.++. ..|+.-...||... .++...+- .
T Consensus 107 ~~-~v~f~~sGsEA-ve~AlKlAr~-~---~~~~----g~t~r-~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~ 175 (466)
T PRK07030 107 LS-RCFYADNGSSA-IEVALKMSFH-Y---WRNR----GKPRK-KRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLD 175 (466)
T ss_pred cC-EEEEeCCcHHH-HHHHHHHHHH-H---HHHh----CCCCC-cEEEEECCCcCcccHHHHhccCCccccccCCccCCC
Confidence 33 89999888886 2222222100 0 0000 01232 24555555555543 33322111 1
Q ss_pred EEEEecCCC-----C-------CCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDD-----G-------LLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~-----g-------~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..+|.... + .-+++++++.+.+. .+++..+++.. ++...|.+.+ +++|.++|++||+++|
T Consensus 176 ~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~--~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI 253 (466)
T PRK07030 176 TIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH--HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLI 253 (466)
T ss_pred CEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC--CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 233332211 1 01356677777632 24667878887 5777788765 6789999999999999
Q ss_pred EeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+ |-..- -..... -..|+++++ |.++|.. .+|.+++++++. +.+.......+.
T Consensus 254 ~DEV~TGfGRtG~~~a~~~~g-v~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~--~~~~~~~~~~~~------------- 315 (466)
T PRK07030 254 HDEIAVGFGRTGTMFACEQAG-IRPDFLCLS--KALTGGYLPLAAVLTTDTVY--QAFYDDYPTLRA------------- 315 (466)
T ss_pred EeehhhCcCccccchHHHhcC-CCCCEEeee--hhccCCcccceEEEecHHHH--HHHhcccccccc-------------
Confidence 9999653 22111 001110 145999885 9998763 589999999883 222110000000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceE-EeCCCCCCCcceEEEEe
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIK-ILGNTSTKRQAILSFNI 419 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~-v~~~~~~~r~~~~~f~~ 419 (609)
+. ...-..|.|--..+..+.++.+ + .+.+.++.+++.+++.+.|+++ |.+. +.+ +...+.+.+
T Consensus 316 ~~---h~~T~~gnpla~aaa~a~L~~i--~---~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG-----~Gl~~gie~ 382 (466)
T PRK07030 316 FL---HSHSYTGNPLACAAALATLDIF--E---QDNVIENNRALARRMAEATAHLADHPHVAEVRQ-----TGMILAIEM 382 (466)
T ss_pred cc---cCCCCCCCHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEe-----ceeEEEEEe
Confidence 00 0000123333333334444443 2 2345566677777777766543 3221 221 223333333
Q ss_pred ccCCCCCcCCCCCCCCCCCC-C---ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 420 HSSTINSSLGENTKTETDKP-L---HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~-l---~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
.. +.. .+..+ . ....+.+.+.+ .|+.+++. .
T Consensus 383 ~~-~~~---------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~----------------------------------g 417 (466)
T PRK07030 383 VQ-DKA---------SKTPYPWQERRGLKVYQHALE-RGALLRPL----------------------------------G 417 (466)
T ss_pred cc-Ccc---------ccccCcchhHHHHHHHHHHHH-CCeEEEec----------------------------------C
Confidence 22 100 00000 0 12356666655 58887621 2
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+|+.+++.+|++|++.++++++++++..
T Consensus 418 ~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 418 SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999875
No 351
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=6.8e-11 Score=118.37 Aligned_cols=353 Identities=19% Similarity=0.227 Sum_probs=210.2
Q ss_pred CChHHHHHHHHHhhcCCccC--CCCCCchhhHHHHHH-HHHHHHHHHHHhCCCCCC---cEEEeCChHHHHHHHHHHHhc
Q 038499 88 RSLRYIENYIINNVLPFYGN--THTCDSYVGQHTTNM-VHEASNYIKKCLGGGQED---AMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n--~~~~~~~~~~~~~~~-~~e~r~~ia~~~g~~~~~---~vift~sGttaal~~l~~~l~ 161 (609)
.....|+|++-..+...|.. |+.. |+.|...-+. ..-++++..+.+|.+++. +|-- =||+.+++.....+
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~R-YYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp-~SGSPANfavYtal-- 126 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGAR-YYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQP-YSGSPANFAVYTAL-- 126 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCccc-ccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeecc-CCCCchhhHHHhhh--
Confidence 45678999998888877744 4432 4455544433 334566677889998773 2222 27888877665544
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HH----HHcCceEE-----EEecCC-CCCCCHHHHHHHHhhhcc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SW----RQSLAEVV-----EIGLDD-DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~----~~~G~~vv-----~v~~~~-~g~ld~e~L~~al~~~~~ 230 (609)
++|++| |+--+..+...+. .+ +..-+.-+ ...+|+ +|.||.|.|++....
T Consensus 127 --------------l~Ph~R--iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~--- 187 (477)
T KOG2467|consen 127 --------------LKPHER--IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL--- 187 (477)
T ss_pred --------------cCCCCe--eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh---
Confidence 478885 6654444333221 11 21112111 223564 789999999988775
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
-||++++.- .+-.-...|..++-++|.+.|++++.|-||-.|.+.-.+-+...+.+|+|+++.||.+-||.| |+++
T Consensus 188 -frPk~iiaG--~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsLRGPRg-~mIF 263 (477)
T KOG2467|consen 188 -FRPKLIIAG--TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSLRGPRG-AMIF 263 (477)
T ss_pred -cCCcEEEec--cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccccCCcc-eeEE
Confidence 478875542 234457789999999999999999999998766555444444446889999999999999996 8888
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh-HHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ-VIQMIRAALAFWVKEY--IGHEVIKKQEETY 387 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~-i~~~~~aal~~~~~~~--~g~~~i~~~~~~l 387 (609)
.++.. +...|-. |-. +-|. .++..-..-. -....|..| .++. ++..+++. -.+....++..++
T Consensus 264 yRkGv---k~~~~k~-g~~-i~yd----lE~kINfaVF-P~lQGGPHNhtIaa----lAvALkQa~tpefk~Yq~qV~~N 329 (477)
T KOG2467|consen 264 YRKGV---KSIKPKQ-GKE-ILYD----LEDKINFAVF-PGLQGGPHNHTIAA----LAVALKQAMTPEFKEYQKQVLKN 329 (477)
T ss_pred EeccC---CcCCCCC-CCc-ceec----hhhhhhhhcc-ccccCCCCcchHHH----HHHHHHhhCCHHHHHHHHHHHHH
Confidence 88876 1222111 111 1110 0000000000 011223222 2222 22223333 2455677788888
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++.+.++|.+. |++++.....++ .+.+.+.+ .++++..+-+.| +.-+|.+.-...+. .
T Consensus 330 akala~~l~~~-Gy~lvtgGTDnH--lvLvDLr~----------------~G~dGarvE~vl-e~~~I~~NKNtvpG-D- 387 (477)
T KOG2467|consen 330 AKALASALISR-GYKLVTGGTDNH--LVLVDLRP----------------KGVDGARVEKVL-ELCHIALNKNTVPG-D- 387 (477)
T ss_pred HHHHHHHHHHc-CceEecCCccce--EEEEeccc----------------cCCchHHHHHHH-HHhhhhhcCCcCCC-C-
Confidence 88888888876 888886532222 23333333 236776666666 66677655321111 0
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC----HHHHHHHHHHHHHHHHhc
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS----NEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t----~eeid~ll~al~~v~~~~ 525 (609)
...+.|+.|||.-+..+| ++|++++.+-|...++-.
T Consensus 388 ----------------------~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i~ 427 (477)
T KOG2467|consen 388 ----------------------KSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKIA 427 (477)
T ss_pred ----------------------ccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHHH
Confidence 112358999998765443 788888888887766543
No 352
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.43 E-value=5.4e-10 Score=122.00 Aligned_cols=229 Identities=13% Similarity=0.085 Sum_probs=136.0
Q ss_pred HHHHHHHHHhhccCCC-ccc--cCCC-----------CC-----CceEEecCCCC------CCChHHHHHHHHHhhcCCc
Q 038499 51 SEKKLTWLQSQIIGKN-AEF--DSPF-----------GK-----RRLTYADHTAS------GRSLRYIENYIINNVLPFY 105 (609)
Q Consensus 51 ~~~~~~~~r~~~~g~~-~~~--~~p~-----------g~-----~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~ 105 (609)
..+.+++.++.+||-- ..+ ..|. |. ...-|+|+.++ |-.++.|.+++.+++....
T Consensus 53 S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~ 132 (474)
T PLN02482 53 SEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT 132 (474)
T ss_pred HHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC
Confidence 5677888888888632 111 1111 11 13458887543 4456899999999886532
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEE
Q 038499 106 GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVF 185 (609)
Q Consensus 106 ~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vl 185 (609)
+.. . ......++.+.|.+.+.. . +.+.|+.|||.+.... +++-. .. .|.+ .|+
T Consensus 133 ---~~~-----~-~~~~~~~lAe~l~~~~p~-~-~~v~f~~SGsEA~e~A-lklAR-------------~~-tgr~-~Ii 185 (474)
T PLN02482 133 ---SFG-----A-PCLLENVLAEMVIDAVPS-V-EMVRFVNSGTEACMGV-LRLAR-------------AY-TGRE-KII 185 (474)
T ss_pred ---CCC-----C-CCHHHHHHHHHHHHhCCC-C-CEEEEeCChHHHHHHH-HHHHH-------------Hh-cCCC-EEE
Confidence 111 0 123455667777777753 2 4899998888863333 22210 01 2322 465
Q ss_pred ECCCCccchHHH-HHHc--C-----------c------eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 186 VGPHEHHSNLLS-WRQS--L-----------A------EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 186 v~~~~h~s~~~~-~~~~--G-----------~------~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
.-...||..... +... + . .+..++.+ |+++|++.+.++ .+++.+|++..+...
T Consensus 186 ~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~--~~~iAavI~Epv~g~ 258 (474)
T PLN02482 186 KFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEAN--KGEIAAVILEPVVGN 258 (474)
T ss_pred EECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhC--CCceEEEEECCCCCC
Confidence 555555553211 1110 0 0 11222222 789999988742 245778899999888
Q ss_pred cccccC----HHHHHHHHHHhCCeEEEeccccCCcccccC-CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 246 TGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDV-RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 246 TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~-~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
.|.+.| +++|.++|++||+++|+|+++.+.-...-. .....-..|++++ .|.+||...+|.++.++++
T Consensus 259 ~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~ei 331 (474)
T PLN02482 259 SGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRREI 331 (474)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcHHH
Confidence 999877 457999999999999999998532111000 0000013587665 5999875557888999888
No 353
>PRK07481 hypothetical protein; Provisional
Probab=99.42 E-value=7.3e-10 Score=120.79 Aligned_cols=365 Identities=15% Similarity=0.106 Sum_probs=192.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++......... .+ ..+....++.++|.+.++..
T Consensus 31 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~-~~~~~~~~lae~L~~~~~~~ 102 (449)
T PRK07481 31 GDGVYVYDIDGK---KLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTF----DG-TTHPRAIELSYELIDMFAPE 102 (449)
T ss_pred ccccEEEeCCCC---EEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecc----cc-cCCHHHHHHHHHHHHhcCCC
Confidence 556667776675 39998653 556788999999888653111000 01 12344566777788887422
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G------------~~ 204 (609)
.-+.+.|+.||+++ +...+++-- ... + ..-+++ |..|+.-...||+... +....+ ..
T Consensus 103 ~~~~v~f~~sGsEA-ve~AlklAr-~~~---~----~~g~~~-r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g 172 (449)
T PRK07481 103 GMRRVFFSSGGSDS-VETALKLAR-QYW---K----VRGQPE-RTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPG 172 (449)
T ss_pred CCCEEEEcCchHHH-HHHHHHHHH-HHH---H----hcCCCC-CcEEEEECCCcCCcchhhhccCCCcccccccCCCCCC
Confidence 22389999888885 333322210 000 0 000123 3356655555555332 221111 12
Q ss_pred EEEEecCCC-----CCCCHHHH--------HHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDD-----GLLDIEAL--------RSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~-----g~ld~e~L--------~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++.... +..|++++ ++.|.. ...+++..|++..++...|.+.+ +++|.++|++||+++|
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~-~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI 251 (449)
T PRK07481 173 CFHVETPWLYRNPFTEQDPEELARICARLLEREIAF-QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLI 251 (449)
T ss_pred CEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh-cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 333332210 00134443 343431 11246778899988888898876 7889999999999999
Q ss_pred EeccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+ +-.. .-..... -.+|+++++ |.++|.. .+|.+++++++. +.+.+.....+...
T Consensus 252 ~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~--~~~~~~~~~~~~~~----------- 315 (449)
T PRK07481 252 ADEVVTGFGRTGSWFGSRGWG-VKPDIMCLA--KGITSGYVPLGATMVNARIA--DAFEANADFGGAIM----------- 315 (449)
T ss_pred EeehhhCcCcCchhhHhhhcC-CCCCEEEEe--ecccCCCcCceEEEEcHHHH--HHHhccCccccccc-----------
Confidence 9999663 2211 0011110 145888885 9998652 479999998873 23221100000000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEE
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFN 418 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~ 418 (609)
...-..|.|-..+...+.++.+. .+.+.++.+++.+++.+.|++ .|-+ ++.+ +...+.+.
T Consensus 316 -----h~~T~~gnpl~~aaa~a~L~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-----~Glm~gi~ 380 (449)
T PRK07481 316 -----HGYTYSGHPVACAAALATLDIVV-----REDLPANAAKRGAYLLEGLQPLKERFELVGDVRG-----KGLMLALD 380 (449)
T ss_pred -----cCCCCCCCHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEee-----cceEEEEE
Confidence 00001233333333344444331 234455555666666655544 3322 1222 22233333
Q ss_pred eccCCCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
+.. +.. ...+. ....+...+.+ .||.+++.
T Consensus 381 l~~-~~~----------~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~--------------------------------- 415 (449)
T PRK07481 381 LVA-DKA----------TREPIDPSKGYANAVADVARE-NGVLVRPS--------------------------------- 415 (449)
T ss_pred ecc-ccc----------ccCCCCchhHHHHHHHHHHHh-CCeEEEec---------------------------------
Confidence 322 100 00011 12456666655 58887621
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
...+||+.++.+|++|+|++++++++++..
T Consensus 416 -g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 416 -GTKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 135899999889999999999999999865
No 354
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.42 E-value=2.7e-10 Score=123.24 Aligned_cols=206 Identities=16% Similarity=0.095 Sum_probs=121.3
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|..++ |-..+.|.+++.+++.... +.. ..+....++.+.+.+.++...+ .|.|+.||+.+.
T Consensus 54 ~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~------~~~~~~~~la~~L~~~~~~~~~-~v~f~~SGsEA~ 123 (433)
T PRK00615 54 TFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SYG------LTSEQEILFAEELFSYLGLEDH-KIRFVSSGTEAT 123 (433)
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CCC------CCCHHHHHHHHHHHHhCCCCcC-EEEEeCchHHHH
Confidence 48887644 5567899999998886431 110 1123455677777777764333 899998888863
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH----HHHHHcCce---EEEE---e-cCCC----CCCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL----LSWRQSLAE---VVEI---G-LDDD----GLLD 217 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~----~~~~~~G~~---vv~v---~-~~~~----g~ld 217 (609)
...+++-- .. .|.. .|+.-...||+.. ......+-. .... + .... ..-|
T Consensus 124 -e~AiklAr-------------~~-tgr~-~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (433)
T PRK00615 124 -MTAVRLAR-------------GI-TGRS-IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYND 187 (433)
T ss_pred -HHHHHHHH-------------Hh-hCCC-EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCC
Confidence 33332210 01 2322 4555454455432 111111100 0000 0 0000 0127
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCccccccCH----HHHHHHHHHhCCeEEEeccccCCcccc-c-CCCCCCCCccE
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT----RSIARLLHQYGGFACFDFAASGPYVEI-D-VRSGQTDGYDA 291 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl----~~I~~la~~~g~~vivD~A~~~~~~~i-d-~~~~~~~~~D~ 291 (609)
+++|++.+.+.. +++.+|++..+....|.+.|. ++|.++|++||+++|+|+++.+--... - ..... -..|+
T Consensus 188 ~~~l~~~l~~~~--~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~g-v~PDi 264 (433)
T PRK00615 188 FQIFQTVMNSLG--HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYH-VKPDI 264 (433)
T ss_pred HHHHHHHHHhcC--CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcC-CCCCe
Confidence 899999886421 467788999998888998884 599999999999999999985321110 0 00010 14588
Q ss_pred EEEcCCCCCCCCCCcEEEEEechh
Q 038499 292 IFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 292 v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
+++ .|.+||...+|++++++++
T Consensus 265 ~~~--gK~lggG~p~~av~~~~~i 286 (433)
T PRK00615 265 TVY--GKILGGGLPAAAVVAHKSI 286 (433)
T ss_pred EEE--cccccCCcceeeeeecHHH
Confidence 765 6999864447888999888
No 355
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.42 E-value=3.6e-11 Score=129.36 Aligned_cols=237 Identities=17% Similarity=0.204 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++.+..|+.+|++.. .|.-|||+.++..++.++ +++|| .|+++...|-|+...+..
T Consensus 70 G~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~---------------~~~GD--~VLvdRN~HKSi~~glil 129 (557)
T COG1982 70 GPIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAV---------------LTPGD--KVLVDRNCHKSIHHGLIL 129 (557)
T ss_pred ccHHHHHHHHHHHhCCCce---EEEECCccHHHHHHHHhh---------------cCCCC--EEEecCCccHHHHHHHHH
Confidence 3578999999999999754 444489999888888776 48999 799999999999999999
Q ss_pred cCceEEEEecCCC------CCCCHHHHHHHHhhhccCCCc-eEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 201 SLAEVVEIGLDDD------GLLDIEALRSKLELYKDAKRP-ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 201 ~G~~vv~v~~~~~------g~ld~e~L~~al~~~~~~~~~-~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
.|+..+++....+ |.++.+.+.+++.++ +.. |+++++++ +-.|+..++++|.+.+|++++|+.+|+++.
T Consensus 130 aGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~---~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~ 205 (557)
T COG1982 130 AGATPVYLEPSRNPLYGIIGGIPLETFKEALLAH---PDAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHP 205 (557)
T ss_pred cCCceEEecCCCCccccccCCCCHHHHHHHHHhC---hhhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCc
Confidence 9999999865432 579999999988764 333 77777765 467999999999999999999999999987
Q ss_pred CCcccccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEech-hhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 GPYVEIDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~~~~~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
+....-++.+. ...+.|+++-|.||.+++..-..+|.+++. . ++. ......-.
T Consensus 206 ~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~--~~~----------------------~r~nea~~ 261 (557)
T COG1982 206 AHFDFSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRA--VNH----------------------ERFNEALM 261 (557)
T ss_pred ccccccccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCcc--CCH----------------------HHHHHHHH
Confidence 64333333221 124789999999999997766778887763 2 110 00000011
Q ss_pred cccCCChhHH--HHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHhCCCCceEEeCCC
Q 038499 351 RESGGTPQVI--QMIRAALAFWVKEYIGHEVI---KKQEETYIERALERLLPNQNIKILGNT 407 (609)
Q Consensus 351 r~~~gtp~i~--~~~~aal~~~~~~~~g~~~i---~~~~~~l~~~~~~~L~~~p~i~v~~~~ 407 (609)
....++|+.. +.+-+|-.+ ....|.... .....+.++.+++....++++.++.+.
T Consensus 262 ~h~STSPsY~l~ASlD~Ar~~--~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 262 MHQSTSPSYPLMASLDVARMQ--EGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred HHccCCchHHHHHHHHHHHHh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 2223445433 222222111 123343332 455666788888888888889888875
No 356
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.42 E-value=8.6e-10 Score=120.56 Aligned_cols=361 Identities=15% Similarity=0.116 Sum_probs=190.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++......... .. ......++.+.+.+.+...
T Consensus 53 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~--~~----~~~~~~~lae~L~~~~p~~ 123 (472)
T PRK08742 53 GEGAWLVGHDGR---RYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA--GF----THEPAVQLAEQLLAIAPRQ 123 (472)
T ss_pred cccCEEEeCCCC---EEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc--cc----CCHHHHHHHHHHHHhCCCc
Confidence 445555555564 39997644 567789999998887643111110 01 1233456777777776431
Q ss_pred ----CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc--------
Q 038499 138 ----QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA-------- 203 (609)
Q Consensus 138 ----~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~-------- 203 (609)
.-+.|.|+.|||.+. ...+++ .... ...-+++ +..|+.-...||+.. .++...+.
T Consensus 124 ~~~~~~~~v~f~~sGSEAv-E~AlKlAr~~~---------~~~g~~~-r~~ii~~~~syHG~t~gals~~~~~~~~~~~~ 192 (472)
T PRK08742 124 DGRAPLSKVFYADNGSAGV-EVALKMAFHYF---------HNRGEHR-RTRFIALENGYHGETIGALAVGDIPLYRRVYA 192 (472)
T ss_pred ccCCCCCEEEEeCCchHHH-HHHHHHHHHHH---------HhcCCCC-CcEEEEECCCcCCCchhhhhccCCcccccccC
Confidence 123899998888862 222222 1100 0000122 235666555565543 22222111
Q ss_pred ----eEEEEecCCC-----C-------CCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHh
Q 038499 204 ----EVVEIGLDDD-----G-------LLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQY 262 (609)
Q Consensus 204 ----~vv~v~~~~~-----g-------~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~ 262 (609)
.+..++.... + ..+++.+++.+.+ ..+++..+++.. ..+..|.+.+ ++++.++|++|
T Consensus 193 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~ 270 (472)
T PRK08742 193 PLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ--SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH 270 (472)
T ss_pred CCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc
Confidence 2233333211 1 0135677777753 124667777877 4777788765 67899999999
Q ss_pred CCeEEEeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccc
Q 038499 263 GGFACFDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 263 g~~vivD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
|+++|+|+++.+ |-... -....+ -..|+++++ |.+||.. .+|.+++++++. +.+.+.... +.
T Consensus 271 gillI~DEV~TGfGRtG~~~a~e~~g-v~PDiv~~g--Kgl~gG~~Plaav~~~~ei~--~~~~~~~~~-~~-------- 336 (472)
T PRK08742 271 GAFLIADEIATGFGRTGTLFACEQAG-VMPDLLCLS--KGLTGGFLPLSAVLATQQLY--DAFLDDSRE-RA-------- 336 (472)
T ss_pred CCEEEEechhhCCCCCccchHHHhcC-CCCCEEEEc--ccccCCCCCcceeeccHHHH--HHhhccCcc-Cc--------
Confidence 999999999763 32210 011110 146999886 9997653 589999998883 222110000 00
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH---hCCCCce-EEeCCCCCCCcce
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER---LLPNQNI-KILGNTSTKRQAI 414 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~---L~~~p~i-~v~~~~~~~r~~~ 414 (609)
+. ...-..|.|--.+...+.++.+ +. +.+.++.+++.+++.+. +++.|.+ .+.+ +...
T Consensus 337 -----~~---h~~T~~gnpl~~Aaa~a~L~~i--~~---~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG-----~Gl~ 398 (472)
T PRK08742 337 -----FL---HSHSYTGNPLACAAALATLDIF--AD---DDVIARNQPTAARMTQLAAQIGEHPHVADVRQ-----AGMV 398 (472)
T ss_pred -----cC---cCCCCCccHHHHHHHHHHHHHH--HH---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEec-----cceE
Confidence 00 0000123333333334445544 22 22334444444444443 3334432 2222 2223
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCC-----hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLH-----GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
+.+.+.. +.. ...... ...+.+.+.+ .||.+++.
T Consensus 399 ~giel~~-~~~----------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~----------------------------- 437 (472)
T PRK08742 399 VAFELTR-GGN----------KRTPFPPAARVGLHAYRAALA-RGVVLRPL----------------------------- 437 (472)
T ss_pred EEEEecc-Ccc----------ccccCCchhHHHHHHHHHHHH-CCeEEEec-----------------------------
Confidence 3333332 110 000111 2356666655 59988621
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+.|||.+++..|++|+++++++|+++++.
T Consensus 438 -----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 438 -----GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred -----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 257999999999999999999999998865
No 357
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.42 E-value=1.9e-10 Score=120.12 Aligned_cols=220 Identities=18% Similarity=0.187 Sum_probs=141.7
Q ss_pred CCCccccCCCCCCceEEecCCCC-CC-----ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS-GR-----SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~-g~-----~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.++++.+..|++ |.||..+ || .++.|.+++.+.+..-. + .|. .++..-++.+.|.+.++.-
T Consensus 42 g~Ga~l~DvDGn~---YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-------~-fg~-Pte~Ei~~Aell~~~~p~~ 109 (432)
T COG0001 42 GKGAYLTDVDGNE---YIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-------S-FGA-PTELEVELAELLIERVPSI 109 (432)
T ss_pred ccCCeEEeCCCCE---eeehhccCcccccCCCCHHHHHHHHHHHHhcC-------C-CCC-CCHHHHHHHHHHHHhcCcc
Confidence 4556666666653 8888744 33 47889999998886421 1 121 2344556668888888764
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-c--Cc-----------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ-S--LA----------- 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-~--G~----------- 203 (609)
+.|-|+.|||.|.+..+--+.+ .-.-| .|+.-.-.||.....+.. . |+
T Consensus 110 --e~vrfvnSGTEAtmsAiRlARa--------------~TgR~--kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv 171 (432)
T COG0001 110 --EKVRFVNSGTEATMSAIRLARA--------------YTGRD--KIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV 171 (432)
T ss_pred --cEEEEecchhHHHHHHHHHHHH--------------hhCCC--eEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCC
Confidence 2789998999986655533322 11222 466655556655544432 2 11
Q ss_pred ------eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc
Q 038499 204 ------EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 204 ------~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~ 273 (609)
.+..+|.+ |++++++++++. .++...|++..+...-|.+.| +++|.++|++||+++|+|+...
T Consensus 172 p~~~a~~ti~~~yN-----D~~al~~~~~~~--g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT 244 (432)
T COG0001 172 PADVAKHTLVLPYN-----DLEALEEAFEEY--GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT 244 (432)
T ss_pred ChhhhccEEEecCC-----CHHHHHHHHHHc--CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh
Confidence 24445554 899999999853 246778888888888899887 6679999999999999999865
Q ss_pred CCccccc-CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC
Q 038499 274 GPYVEID-VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS 324 (609)
Q Consensus 274 ~~~~~id-~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~ 324 (609)
+.-.... ......-..|+.+++ |.+||...+|++-.++++ .+.+.|.
T Consensus 245 GFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~ei--M~~~~p~ 292 (432)
T COG0001 245 GFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRAEI--MEQLAPL 292 (432)
T ss_pred hcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHHHH--HhhhCCC
Confidence 4322211 001000124665554 999988889999999999 5555443
No 358
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.41 E-value=1.7e-10 Score=125.10 Aligned_cols=205 Identities=15% Similarity=0.124 Sum_probs=121.6
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|..++ |-.++.|.+++.+++.... +. + .......++.+++.+.+.. .+ .+.|+.+|+.+.
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~---~~--~----~~~~~~~~la~~L~~~~~~-~~-~v~~~~sGseA~ 119 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL---SF--G----APTELEVELAELVIELVPS-IE-MVRMVNSGTEAT 119 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC---cC--C----CCCHHHHHHHHHHHHhCCC-CC-EEEEecCHHHHH
Confidence 47787543 4678899999998886521 11 1 1123455777888877642 33 788987777753
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcCc------------eEEEEecC--CCCCCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSLA------------EVVEIGLD--DDGLLD 217 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G~------------~vv~v~~~--~~g~ld 217 (609)
...+-.+.. ....+ .|+.....||+... .+...|. ..+.+..+ ..-.-|
T Consensus 120 e~Aik~a~~--------------~~g~~--~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 183 (426)
T PRK00062 120 MSAIRLARG--------------YTGRD--KIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYND 183 (426)
T ss_pred HHHHHHHHH--------------HhCCC--eEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCC
Confidence 333322221 11122 45655555665432 2221110 00001000 000137
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccCCCCC--CCCccE
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ--TDGYDA 291 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~--~~~~D~ 291 (609)
++++++.+.+. .+++.++++......+|.+.| +++|.++|++||+++|+|+++.+.... .+-... .-..|+
T Consensus 184 ~~~l~~~i~~~--~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g-~~~~~~~~~~~pDi 260 (426)
T PRK00062 184 LEAVEELFEEY--GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA-LGGAQGYYGVTPDL 260 (426)
T ss_pred HHHHHHHHHhC--CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC-CccHHHHhCCCcch
Confidence 89999988642 246778899988888999988 899999999999999999998732111 110000 012465
Q ss_pred EEEcCCCCCCCCCCcEEEEEechh
Q 038499 292 IFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 292 v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
+ ++.|.+++...+|++++++++
T Consensus 261 ~--~~gK~l~~G~p~ga~~~~~~i 282 (426)
T PRK00062 261 T--TLGKIIGGGLPVGAFGGRREI 282 (426)
T ss_pred H--hhhhHhhCCCcceeeeEHHHH
Confidence 4 556999864447888888887
No 359
>PRK07480 putative aminotransferase; Validated
Probab=99.41 E-value=6.9e-10 Score=121.06 Aligned_cols=360 Identities=13% Similarity=0.009 Sum_probs=192.6
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++... ++.... . ........++.+.|++.++.+
T Consensus 39 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~---~~~~~~-~-~~~~~~~~~lae~L~~~~p~~ 110 (456)
T PRK07480 39 AEGVYLWDSEGN---KILDGMAGLWCVNVGYGRKELADAAARQMREL---PYYNTF-F-KTTHPPAIELAAKLAEVAPPG 110 (456)
T ss_pred ceeeEEEeCCCC---EEEEccchHHHhcCCCCCHHHHHHHHHHHHhc---CCcccc-c-ccCCHHHHHHHHHHHHhCCCC
Confidence 555666666675 39998654 666789999999888653 111000 0 012345667778888887643
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc------------e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA------------E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~------------~ 204 (609)
-+ .+.|+.||+++. ...+++.- ... .. .=+++ +..|+.-...||+.. ..+...|. .
T Consensus 111 ~~-~v~f~~SGseA~-e~AlklAr-~~~---~~----~g~~~-r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~ 179 (456)
T PRK07480 111 FN-HVFFTNSGSEAN-DTVLRMVR-HYW---AL----KGKPQ-KKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPG 179 (456)
T ss_pred cC-EEEEeCCcHHHH-HHHHHHHH-HHH---Hh----cCCCC-CcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCC
Confidence 33 899998888863 22222210 000 00 00123 335666555555532 22221111 1
Q ss_pred EEEEecCCCC----CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 205 VVEIGLDDDG----LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 205 vv~v~~~~~g----~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+..++..... ..+ +++|++.+.+ ...+++..|++..++...|.+.+ +++|.++|++||+++|+
T Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~ 258 (456)
T PRK07480 180 IVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE-LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVA 258 (456)
T ss_pred CeecCCCcccccccCCChHHHHHHHHHHHHHHHHh-cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2222211100 001 3566655532 11246778889888888899877 78999999999999999
Q ss_pred ecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCC--CCC-ccCCCceEeeccccccc
Q 038499 269 DFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSF--PPS-TCGGGTVNYVNGFNEKD 341 (609)
Q Consensus 269 D~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~--~p~-~~ggg~v~~~~~~~~~~ 341 (609)
|+++. +|-... -....+ -..|+++++ |.++|.. .+|.+++++++. +.+ .+. ...++|
T Consensus 259 DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--K~l~gG~~Pi~av~~~~~i~--~~~~~~~~~~~~~~T----------- 322 (456)
T PRK07480 259 DEVICGFGRTGEWFGSQHFG-IKPDLMTIA--KGLTSGYIPMGAVGVGDRVA--EVLIEEGGEFNHGFT----------- 322 (456)
T ss_pred echhhCCCcCcchhhhhhcC-CCCCeeeee--hhhccCCccceEEEEcHHHH--HHHhcCCCCcccCCC-----------
Confidence 99975 322210 111111 135887775 9998642 478888888873 222 110 000111
Q ss_pred ccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHhCC---CCce-EEeCCCCCCCcceEE
Q 038499 342 TLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQE-ETYIERALERLLP---NQNI-KILGNTSTKRQAILS 416 (609)
Q Consensus 342 ~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~-~~l~~~~~~~L~~---~p~i-~v~~~~~~~r~~~~~ 416 (609)
..|.|-..+...+.++.. +.. .+.++. +++.+++.+.|++ .|.+ .+-+ ...++.
T Consensus 323 -----------~~gnpl~~Aaa~a~L~~l--~~~---~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG-----~Glm~g 381 (456)
T PRK07480 323 -----------YSGHPVAAAVALANLRIL--RDE---GIVERVRDDTGPYLQKRLRELADHPLVGEVRG-----VGLVGA 381 (456)
T ss_pred -----------CCcCHHHHHHHHHHHHHH--HhC---CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEe-----ecceEE
Confidence 134444444445555544 222 233344 2445555555543 3321 2222 122333
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCC----hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLH----GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~----~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+.+.. +.. ....+.. ...+...+.+ .||.+.+.
T Consensus 382 ie~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-------------------------------- 418 (456)
T PRK07480 382 IELVK-DKA---------TRERFEAGGGVGTICRDHCFA-NGLIMRAV-------------------------------- 418 (456)
T ss_pred EEEec-ccc---------ccccCcchhhHHHHHHHHHHH-CCcEEeec--------------------------------
Confidence 33322 100 0000111 2345555655 58887520
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+.+|+++++.+|++|+++++++|++++...
T Consensus 419 --~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 419 --GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1568999999999999999999999988764
No 360
>PRK07483 hypothetical protein; Provisional
Probab=99.40 E-value=1.1e-09 Score=119.15 Aligned_cols=372 Identities=14% Similarity=0.098 Sum_probs=194.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... ..+.. ....+...++.+.|.+++...
T Consensus 19 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~ 89 (443)
T PRK07483 19 GEGIYLIDATGK---RYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLA-YAHTS-----FFTTEPAEALADRLVAAAPAG 89 (443)
T ss_pred ceEEEEEeCCCC---EEEEcCccHhhhccCCCCHHHHHHHHHHHHhcc-Ccccc-----ccCCHHHHHHHHHHHHhCCCC
Confidence 555667666665 39997653 5667899999999886531 11111 011334556777787776533
Q ss_pred CCCcEEEeCChHHHHHHHHHHH-hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC------------c
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEV-MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL------------A 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~-l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G------------~ 203 (609)
.+ .+.|+.|||.+ +...+++ .... + ..-+++ +..|+.-...||... .+....| .
T Consensus 90 ~~-~v~f~~sGsEA-ve~AlklAr~~~-----~----~~g~~~-r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~ 157 (443)
T PRK07483 90 LE-HVYFVSGGSEA-VEAALKLARQYF-----V----EIGQPQ-RRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLI 157 (443)
T ss_pred CC-EEEEcCCcHHH-HHHHHHHHHHHH-----H----hcCCCC-CcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCC
Confidence 33 89999888886 3322222 1100 0 000133 335666555555443 2222111 1
Q ss_pred eEEEEecCCCCC-C------------CHHHHHHHHhhhccCCCceEEEEecccC-ccccccC----HHHHHHHHHHhCCe
Q 038499 204 EVVEIGLDDDGL-L------------DIEALRSKLELYKDAKRPILGSFSACSN-VTGIYSD----TRSIARLLHQYGGF 265 (609)
Q Consensus 204 ~vv~v~~~~~g~-l------------d~e~L~~al~~~~~~~~~~lv~~s~~sn-~TG~~~d----l~~I~~la~~~g~~ 265 (609)
.+..++...... . .++++++++.. ...+++..|++..+.. ..|.+.+ +++|.++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gil 236 (443)
T PRK07483 158 EAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILE-LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVL 236 (443)
T ss_pred CCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh-cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCE
Confidence 123333211000 0 13566666642 1124567888887775 3577765 78899999999999
Q ss_pred EEEeccccCCcccccCCCC--CCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 266 ACFDFAASGPYVEIDVRSG--QTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 266 vivD~A~~~~~~~id~~~~--~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
+|+|+++.+....-.+-.. ..-..|+++++ |.++|.. .+|.+++++++. +.+.+. .+...
T Consensus 237 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~--~~~~~~---~~~~~---------- 299 (443)
T PRK07483 237 LILDEVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLGAGYQPIGAVLASDRIY--DAIADG---SGFFQ---------- 299 (443)
T ss_pred EEEecceeCcccCcHHHHHhhcCCCCCeeeeh--hhhccCccccEEEEEcHHHH--HHHhcC---CCccc----------
Confidence 9999997632111111000 00145888885 9998763 589999998883 333211 00000
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCce-EEeCCCCCCCcceEEE
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL----PNQNI-KILGNTSTKRQAILSF 417 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i-~v~~~~~~~r~~~~~f 417 (609)
...-..|.|--.....+.++.+ + .+.+.++.+++.+++.+.|+ +.|.+ ++-+ +..++.+
T Consensus 300 ------h~~T~~gnpl~~aaa~a~l~~i--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG-----~Glm~gi 363 (443)
T PRK07483 300 ------HGHTYLGHATACAAALAVQRVI--A---EDGLLANVRARGEQLRARLRERLGQHPHVGDIRG-----RGLFVGV 363 (443)
T ss_pred ------cCCCCCCCHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEee-----cccEEEE
Confidence 0000123333333334444443 2 22344555555555555554 34322 1222 2233333
Q ss_pred EeccCCCCCcCCCCCCCCCCCC-CChHHHHHHHhhhcCcEeccCcccC-ChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 418 NIHSSTINSSLGENTKTETDKP-LHGPFVATLLNDLFGIQARGGCACA-GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~-l~~~~v~~~L~~~~GI~v~~G~~ca-~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
.+.. +.. ........ -....+.+.+.+ .|+.+.+...+. +. .+
T Consensus 364 e~~~-~~~------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~~~~~~~~---------------------------~~ 408 (443)
T PRK07483 364 ELVA-DRA------TKAPFDPALKLHARIKREAMA-RGLMVYPMGGTIDGV---------------------------RG 408 (443)
T ss_pred EEee-ccc------ccCCCCchhhHHHHHHHHHHH-CCcEEEecCccccCC---------------------------CC
Confidence 3322 100 00000000 012456666766 599887421110 00 13
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+|+..++..|++|+++++++|++++...
T Consensus 409 ~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 409 DHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999988753
No 361
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.39 E-value=5.7e-10 Score=114.75 Aligned_cols=317 Identities=15% Similarity=0.122 Sum_probs=197.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
+.+.-+..-+....++++.|.+-.+.-++- ++|++-..+..+.. +...++..|+|+...|+...
T Consensus 115 SQGrLqaLfefQtlv~dLTGm~VANASm~D--eaTAaAEAm~ma~r--------------~~k~k~~~~~V~~~vhpqt~ 178 (450)
T COG0403 115 SQGRLEALFEFQTLVADLTGLDVANASMLD--EATAAAEAMLMAKR--------------VTKKKRNKFLVPKDVHPQTL 178 (450)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCcccchhhh--hHHHHHHHHHHHHH--------------hhcCcCceEEecCCCCHHHH
Confidence 344556777889999999998755344443 55655454444432 22333347999999999988
Q ss_pred HHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccc-cccCHHHHHHHHHHhCCeEEEec
Q 038499 196 LSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTG-IYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 196 ~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG-~~~dl~~I~~la~~~g~~vivD~ 270 (609)
..++. .|.+|+.++.+ |+++|+++ .. +.+..+++..|+ ..| ...|+.+|.+.+|++|+++++=.
T Consensus 179 ~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~----~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~a 247 (450)
T COG0403 179 DVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DD----GDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAA 247 (450)
T ss_pred HHHHhhcccCceEEEEeccc-----hhhhhhhc-cc----cCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEe
Confidence 77764 46788877766 78888888 42 467788888886 667 66779999999999999877532
Q ss_pred c-ccCCcccccCCCCCCCCccEEEEcCCCC-----CCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 271 A-ASGPYVEIDVRSGQTDGYDAIFLSTHKF-----LGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 271 A-~~~~~~~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
- -+.+.. ++-...|+|+++.+.+-+ ||||. +|++.+++++ .++++--..| -+++............
T Consensus 248 DplaL~LL----~pPGe~GADIvvG~~QrfGvPmgfGGPh-ag~fA~~~~~--~R~mPGRlVG-~S~D~~G~~A~rLaLQ 319 (450)
T COG0403 248 DPLALGLL----KPPGEFGADIVVGSAQRFGVPMGFGGPH-AGYFAVKDEF--KRQMPGRLVG-VSVDAAGKRAFRLALQ 319 (450)
T ss_pred chhHhhcc----CCccccCCceEEecCcccCCCcCCCCcc-eeeeeEhHhH--hhcCCCceee-eeecCCCCchhhhhHH
Confidence 1 111111 111123899999999865 67777 7999999999 4555433333 2221110000011122
Q ss_pred cccccccccCCChhHHHH-----HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEE
Q 038499 345 LEDIEERESGGTPQVIQM-----IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFN 418 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~-----~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~ 418 (609)
......|.+-.|.||... ..+++-.......|...|.++..+++.++.++|+++. |++++... ...-+.+.
T Consensus 320 TREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~---fFdt~~v~ 396 (450)
T COG0403 320 TREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH---FFDTFTVR 396 (450)
T ss_pred HHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccc---ceeeEEEe
Confidence 222344555667776432 1233333333556889999999999999999999653 57776431 11122222
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
+.. -....+.+.. ...||.++. + .+..+
T Consensus 397 ~~~------------------~~~~~l~~~~-~~~G~~L~~--------------~-------------------~~~~~ 424 (450)
T COG0403 397 VPE------------------EVAEALLAAA-IAGGINLRR--------------V-------------------DADTV 424 (450)
T ss_pred cch------------------hHHHHHHHHH-HhcCCceee--------------e-------------------cCCce
Confidence 211 0123333333 234665551 1 14577
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 038499 499 RISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 499 Rls~~~~~t~eeid~ll~al~~v~ 522 (609)
=+++.-.+|+++++.+++++....
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred EEEeecccCHHHHHHHHHHHhhhc
Confidence 888888899999999999987653
No 362
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.39 E-value=2.1e-09 Score=117.49 Aligned_cols=358 Identities=16% Similarity=0.138 Sum_probs=192.1
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++...... +.. . ..+....++.+.+.+.+...
T Consensus 52 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~-~~~-~----~~~~~~~~la~~L~~~~p~~ 122 (464)
T PRK06938 52 ARGIYVEDVEGR---QFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPL-HTL-D----LTTPVKDQFVQDLFASLPEA 122 (464)
T ss_pred ccccEEEeCCCC---EEEEccCCccccccCCCCHHHHHHHHHHHHhhhcc-ccc-c----cCCHHHHHHHHHHHHhCccc
Confidence 445555555564 49997544 566789999999887532111 110 0 11233445556666665422
Q ss_pred C--CCcEEEe-CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC-----------
Q 038499 138 Q--EDAMIFC-GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL----------- 202 (609)
Q Consensus 138 ~--~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G----------- 202 (609)
- .+.+.|+ .||+.+ +...+++-- .-.|.+ .|+.-...||+.. ......+
T Consensus 123 ~~~~~~v~f~~~SGSEA-ve~AlklAr--------------~~tgr~-~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~ 186 (464)
T PRK06938 123 FAREAKIQFCGPTGTDA-VEAALKLVK--------------TATGRS-TVLSFQGGYHGMSQGALSLMGNLGPKKPLGAL 186 (464)
T ss_pred ccccceEEEeCCCcHHH-HHHHHHHHH--------------HhhCCC-eEEEECCccCCccHHHHhhcCCccccccCCCC
Confidence 1 1257676 478775 333333211 012333 4555555555543 2222111
Q ss_pred -ceEEEEecCCCCC------------CCHHHHHHHHhhhcc-CCCceEEEEecccCccccccC----HHHHHHHHHHhCC
Q 038499 203 -AEVVEIGLDDDGL------------LDIEALRSKLELYKD-AKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGG 264 (609)
Q Consensus 203 -~~vv~v~~~~~g~------------ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~ 264 (609)
..+..++...... .+++.+++.+.+... .+++..+++..+....|.+.| ++++.++|++||+
T Consensus 187 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~gi 266 (464)
T PRK06938 187 LPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGI 266 (464)
T ss_pred CCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 1234444322110 136778888863211 125678888888887788765 6789999999999
Q ss_pred eEEEeccccCC-ccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccc
Q 038499 265 FACFDFAASGP-YVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKD 341 (609)
Q Consensus 265 ~vivD~A~~~~-~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (609)
++|+|+++.+. -.. .-....+ -.+|+++++ |.+||...+|.+++++++ +.+.+...+ +|
T Consensus 267 LlI~DEV~tGfGRtG~~~a~e~~g-v~PDiv~~g--KglggG~PlsAv~~~~~~---~~~~~~~~~-~T----------- 328 (464)
T PRK06938 267 PLIVDEIQSGFGRTGKMFAFEHAG-IIPDVVVLS--KAIGGSLPLAVVVYREWL---DTWQPGAHA-GT----------- 328 (464)
T ss_pred EEEEeccccCCCcCcHHHHHHhcC-CCCCEEEee--ccccCCCceEEEeehhHh---hccCCCCCC-CC-----------
Confidence 99999997642 111 0011110 135999886 999876668888888765 222211111 00
Q ss_pred ccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEE
Q 038499 342 TLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILS 416 (609)
Q Consensus 342 ~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~ 416 (609)
..|.|--.+...+.++.+. .+.+.++.+++.+++.+.|++ .|.+ ++-+ ....+.
T Consensus 329 -----------~~gnpla~Aaa~a~L~~l~-----~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG-----~Glm~g 387 (464)
T PRK06938 329 -----------FRGNQMAMAAGSATLRYIK-----EHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRG-----RGLMLG 387 (464)
T ss_pred -----------CCcCHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec-----cceEEE
Confidence 1233333333344444432 234556666666666666654 3322 2222 223333
Q ss_pred EEeccCCCCCcCCCCCCCCC-CCC---CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 417 FNIHSSTINSSLGENTKTET-DKP---LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~-~~~---l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+.+.. +.. ..+.. ... .....+...+.+ .|+.+.++. +
T Consensus 388 ie~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g----~-------------------------- 429 (464)
T PRK06938 388 VEIVD-PQG------EPDALGHPPANGELASLIQRECLR-RGLILELGG----R-------------------------- 429 (464)
T ss_pred EEecc-Ccc------cccccccCCccHHHHHHHHHHHHH-CCeEEeecC----C--------------------------
Confidence 43322 100 00000 000 012456666655 598876321 0
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+.+|+.+++.+|++|++++++++++++..
T Consensus 430 -~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 430 -HGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred -CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 1267999999999999999999999998865
No 363
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.38 E-value=2.2e-10 Score=120.97 Aligned_cols=363 Identities=16% Similarity=0.142 Sum_probs=204.9
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG 136 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~ 136 (609)
+.+.++.+-.|++ |+|-.++ |-..+.+.+++.+++..+ |.++ +..+.+-..++.++|++....
T Consensus 33 aeG~yl~d~~G~r---~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-------~~~t~~Pa~~LA~~L~~~aP~ 102 (449)
T COG0161 33 AEGVYLTDIDGRR---YLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-------GGFTHEPAIELAEKLAELAPE 102 (449)
T ss_pred cceeEEEeCCCCE---EEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-------cccCCchHHHHHHHHHHhCCC
Confidence 4556777777764 8888776 556788999999988764 1111 111222256778888888884
Q ss_pred CCCCcEEEeCChHHH---HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcC----------
Q 038499 137 GQEDAMIFCGSGTTA---AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSL---------- 202 (609)
Q Consensus 137 ~~~~~vift~sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G---------- 202 (609)
..=+.|.|+.|||++ ||+++.+-.... =+|+ |..++.-...||+.. .+....|
T Consensus 103 ~~l~~vFf~~sGSeAvEtAlKma~qY~~~~------------G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~ 169 (449)
T COG0161 103 GGLDHVFFTDSGSEAVETALKMALQYWRAR------------GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYD 169 (449)
T ss_pred CCccEEEEeCCchHHHHHHHHHHHHHHHhc------------CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhcc
Confidence 322499999999987 455444332100 1333 445666666666543 2221111
Q ss_pred ---ceEEEEecCC------CCC------CCHHHHHHHHhhhccCCCceEEEEecccCc-cccccC----HHHHHHHHHHh
Q 038499 203 ---AEVVEIGLDD------DGL------LDIEALRSKLELYKDAKRPILGSFSACSNV-TGIYSD----TRSIARLLHQY 262 (609)
Q Consensus 203 ---~~vv~v~~~~------~g~------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~-TG~~~d----l~~I~~la~~~ 262 (609)
..+..++... .+. -.+++|++.|.+.. .++...+++.....- +|++.| +++|.++|++|
T Consensus 170 ~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g-~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky 248 (449)
T COG0161 170 PLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG-PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY 248 (449)
T ss_pred ccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC-cccEEEEEecccccccCCcccCChHHHHHHHHHHHHc
Confidence 1233333221 111 23567788777531 134557777777666 888877 78999999999
Q ss_pred CCeEEEeccccC-CcccccCCCCCC--CCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccc
Q 038499 263 GGFACFDFAASG-PYVEIDVRSGQT--DGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 263 g~~vivD~A~~~-~~~~id~~~~~~--~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
|+++|+|++..+ |-.. .|-..+. -..|+++.+ |.+.|. ..+|.++++++++. .+..-. .+. |.
T Consensus 249 ~ILlI~DEV~tGFGRTG-~~FA~e~~gi~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~--~~~~~~--~~~--f~---- 315 (449)
T COG0161 249 GILLIADEVATGFGRTG-KMFACEHAGIVPDILCLA--KGLTGGYLPLSAVLTSDRIYE--AFSDGD--AGA--FM---- 315 (449)
T ss_pred CcEEEeecceeCCCcCc-hhhhhhhcCCCCCeeeec--ccccccchhhHhHhhhHHHHH--HHhccc--CCe--ec----
Confidence 999999998543 3211 1111000 135888887 988654 34788888888842 221100 111 00
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceE-E
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP-NQNIKILGNTSTKRQAIL-S 416 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~-~ 416 (609)
..+. ..|.|--.+...+.++++ + .+.+.++.+++..++.+.|++ +++...++.. ...+.+ .
T Consensus 316 -HG~T---------YsghPlacAaAla~L~i~--e---~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV--R~~Gli~~ 378 (449)
T COG0161 316 -HGHT---------YSGNPLACAAALANLDIL--E---EEDLLERVAEIGAYLQAGLQAALADHPLVGDV--RGLGLIGA 378 (449)
T ss_pred -cCCc---------cccCHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe--eccceEEE
Confidence 0011 123333333333444443 2 345566777777777777765 3322233321 222333 3
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCC---hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLH---GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~---~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
+.+.. +.. ...++. ...+.+.+.+ .|+.+|+.
T Consensus 379 iElv~-d~~----------t~~~f~~~~~~~~~~~~~e-~Gl~iRp~--------------------------------- 413 (449)
T COG0161 379 IELVA-DKA----------TKTPFEARVGARVRAAALE-RGLLIRPL--------------------------------- 413 (449)
T ss_pred EEEec-ccc----------cccchhhhHHHHHHHHHHH-CCeEEeec---------------------------------
Confidence 33333 110 111111 3455566655 59999942
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
...+=++.++-.|++|++++++++.+.++...
T Consensus 414 -g~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 414 -GDVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred -CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 14678888999999999999999999887643
No 364
>PRK06917 hypothetical protein; Provisional
Probab=99.37 E-value=2.3e-09 Score=116.76 Aligned_cols=370 Identities=13% Similarity=0.054 Sum_probs=194.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++... ++...+ ....+...++.+.|.+.+...
T Consensus 20 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~---~~~~~~---~~~~~~~~~lae~L~~~~p~~ 90 (447)
T PRK06917 20 GKGVYLYDQNGN---KYFDGSSGAVTAGIGHGVKEIADAIKEQAEEV---SFVYRS---QFTSEPAEKLAKKLSDLSPGD 90 (447)
T ss_pred eeeeEEEeCCCC---EEEECchhHHhccCCCCCHHHHHHHHHHHhhC---cCcccc---ccCCHHHHHHHHHHHHhCCCC
Confidence 445666666665 38997644 566889999999988753 111000 012344567788888887543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCc------------e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLA------------E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~------------~ 204 (609)
.+ .+.|+.|||.+ +...+++--. . ..++ -.++. ..|+.-...||... ..+...+- .
T Consensus 91 ~~-~v~f~~sGsEA-ve~AlklAr~-~---~~~r----g~t~r-~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 159 (447)
T PRK06917 91 LN-WSFFVNSGSEA-NETAMKIAIQ-H---FQER----GIQGK-HKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLED 159 (447)
T ss_pred CC-EEEEeCChHHH-HHHHHHHHHH-H---HHhc----CCCCC-CEEEEECCCcCCccHHHHHhcCCccccccCCCCCCC
Confidence 33 78999888886 3333332100 0 0000 01332 35666555566543 22222211 1
Q ss_pred EEEEecCCC-----CC-------CCHHHHHHHHhhhccCCCceEEEEecccCc-cccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDD-----GL-------LDIEALRSKLELYKDAKRPILGSFSACSNV-TGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~-----g~-------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~-TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++.... +. -+++.+++.+++.. .+++..+++...... -|.+.| +++|.++|++||+++|
T Consensus 160 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~-~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI 238 (447)
T PRK06917 160 YPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG-AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFI 238 (447)
T ss_pred CeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC-CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEE
Confidence 222221110 00 13456777776321 135678888876654 456655 6789999999999999
Q ss_pred EeccccCCcccccC---CCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAASGPYVEIDV---RSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~~~~~~id~---~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|+++.+....-.+ .... -..|+++++ |.+||.. .+|.+++++++. +.+.+. .+.+.
T Consensus 239 ~DEv~tGfGRtG~~~a~~~~g-v~PDi~~~g--K~l~~G~~Pi~a~~~~~~i~--~~~~~~---~~~~~----------- 299 (447)
T PRK06917 239 ADEVMTGLGRTGAMFAMEHWG-VEPDIMTLG--KGLGAGYTPIAATVVSDRVM--EPILRG---SRSIM----------- 299 (447)
T ss_pred EechhhCcCcccchhhHHhcC-CCCCEEEee--ehhccCCcceEEEEEcHHHH--HHHhcc---Ccccc-----------
Confidence 99997632111111 1110 135887764 9998653 478899998873 332211 00000
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEE
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFN 418 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~ 418 (609)
...-..|.|-..+...+.++.+ +. +.+.++.+++.+++.+.|++ .|.+ ++.+ ...++.+.
T Consensus 300 -----~~~T~~gnpl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-----~Gl~~~ie 364 (447)
T PRK06917 300 -----SGHTLSANPLSAATALAVLEYM--EK---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRG-----KGLLIGVE 364 (447)
T ss_pred -----cccCCCCCHHHHHHHHHHHHHH--HH---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee-----cceEEEEE
Confidence 0000123343334344444443 22 23445555566666655543 3322 1222 22333333
Q ss_pred eccCCCCCcCCCCCCCCCCCC----CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKP----LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~----l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
+.. +.. .+... .....+...+.+ .||.+.+.... + .+..
T Consensus 365 ~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~--~------------------------~g~~ 407 (447)
T PRK06917 365 FVA-DKK---------TKQPFSKSQAVASELISVAAK-NGLLLYPAVAG--Q------------------------DGKE 407 (447)
T ss_pred Eec-cCC---------cCCCCcchhHHHHHHHHHHHh-CCcEEEecccc--c------------------------CCCC
Confidence 322 100 00000 013456666655 59988742100 0 0001
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+.+|++.++.+|++|++++++++.++++..
T Consensus 408 ~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 408 GDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999988664
No 365
>PRK07046 aminotransferase; Validated
Probab=99.37 E-value=1e-09 Score=119.52 Aligned_cols=195 Identities=12% Similarity=0.045 Sum_probs=122.3
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
-.|+|+.++ |-..+.|.+++.+++.... ... . .++...++.+.|.+.++. +.|.|+.|||.+
T Consensus 75 ~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~---~~~--~----~~~~~~~lAe~l~~~~~~---~~v~F~nSGtEA 142 (453)
T PRK07046 75 HRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL---TTM--L----PSEDAAWVGEELARRFGL---PYWQVATTATDA 142 (453)
T ss_pred CEEEEecccccccccCCCCHHHHHHHHHHHHhCC---CCC--C----CCHHHHHHHHHHHHHhCC---CEEEEECCHHHH
Confidence 358886533 4456899999998886421 111 1 134455677777777753 389999888887
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHH--c----------Cc------eEEEEecCC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQ--S----------LA------EVVEIGLDD 212 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~--~----------G~------~vv~v~~~~ 212 (609)
....+-.+.. . .|.. .|+.-...||+... .+.. . |. .+..++.
T Consensus 143 ~e~AlrlAR~--------------~-TGr~-~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 204 (453)
T PRK07046 143 NRFVLRWARA--------------V-TGRP-KILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-- 204 (453)
T ss_pred HHHHHHHHHH--------------h-hCCC-EEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC--
Confidence 4443322221 1 2322 45554444555421 1110 0 10 1122222
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc----CCcccccCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS----GPYVEIDVRSG 284 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~----~~~~~id~~~~ 284 (609)
-|++++++.+.. +++..|++.......|.+.| ++++.++|++||+++|+|+++. .+-.. ....
T Consensus 205 ---nd~~~l~~~l~~----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~g- 275 (453)
T PRK07046 205 ---NDLAALEAALAD----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHG- 275 (453)
T ss_pred ---CCHHHHHHHhCC----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhC-
Confidence 178999998853 46778889888888888876 6889999999999999999985 22110 0001
Q ss_pred CCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 285 QTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
-..|++++ .|.+||...+|++++++++
T Consensus 276 --v~PDi~t~--gK~lggG~Pi~av~g~~~i 302 (453)
T PRK07046 276 --LEPDFLVV--GKPIAGGVPCAVYGFSAEL 302 (453)
T ss_pred --CCccceee--hhhhcCCCcceeeeehHHH
Confidence 13588876 5999876668999999888
No 366
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.36 E-value=2.5e-09 Score=116.71 Aligned_cols=360 Identities=16% Similarity=0.128 Sum_probs=188.6
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|..++ |-..+.|.+++.+++.... ..++. ...+....++.+.+.+.+...
T Consensus 47 a~G~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~-~~~~~-----~~~~~~~~~lAe~L~~~~p~~ 117 (459)
T PRK06931 47 AQGVWVTDVEGN---QYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGL-PLHTL-----DLTTPLKDAFSEYLLSLLPGQ 117 (459)
T ss_pred ccccEEEeCCCC---EEEEcccchhhccCCCCCHHHHHHHHHHHhhhc-ccccc-----ccCCHHHHHHHHHHHHhCCCc
Confidence 445566666664 48998654 5667899999988875311 01110 012344566777777777532
Q ss_pred CC-CcE-EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcC------------
Q 038499 138 QE-DAM-IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSL------------ 202 (609)
Q Consensus 138 ~~-~~v-ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G------------ 202 (609)
.. ..+ +|+.|||.+ +...+++.- .. .| |..|+.-...||+....+. ..+
T Consensus 118 ~~~~~~~f~~~SGsEA-ve~AlklAr-------------~~-tg-r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~ 181 (459)
T PRK06931 118 GKEYCLQFTGPSGADA-VEAAIKLAK-------------TY-TG-RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLM 181 (459)
T ss_pred cccceEEEeCCCcHHH-HHHHHHHHH-------------Hh-cC-CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCC
Confidence 21 134 454578775 333333211 01 22 2256666666665543322 111
Q ss_pred ceEEEEecCCCC--------CCCHHHHHHHHhhhc-----cCCCceEEEEecccCccccccC----HHHHHHHHHHhCCe
Q 038499 203 AEVVEIGLDDDG--------LLDIEALRSKLELYK-----DAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGF 265 (609)
Q Consensus 203 ~~vv~v~~~~~g--------~ld~e~L~~al~~~~-----~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~ 265 (609)
..+..++..... .-+.+++++.+.+.. ..+++..+++..+....|.+.| ++++.++|++||++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~L 261 (459)
T PRK06931 182 PGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGIL 261 (459)
T ss_pred CCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 123444432210 112343332222111 1134678888888888888765 78899999999999
Q ss_pred EEEeccccCCcccccC---CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 266 ACFDFAASGPYVEIDV---RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 266 vivD~A~~~~~~~id~---~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
+|+|+++.+....-.+ .... -.+|+++++ |.+||...+|.++.++++ +.+.+...+ +|
T Consensus 262 lI~DEV~tGfGRtG~~~a~~~~g-v~PDivt~g--K~l~gG~Pi~av~~~~~~---~~~~~~~~~-~T------------ 322 (459)
T PRK06931 262 LIVDEVQAGFARTGKMFAFEHAG-IEPDIIVMS--KAVGGGLPLAVLGIKKEF---DAWQPGGHT-GT------------ 322 (459)
T ss_pred EEEecchhcCCcCchHHHhhhcC-CCCCEEEec--ccccCCcceeeeeeHHHH---hhccCCCCC-CC------------
Confidence 9999997642111111 1110 145888885 999876557887777654 222221111 11
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEE
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSF 417 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f 417 (609)
..|.|--.....+.++.+ +. +.+.++.+++.+++.+.|++ .|.+ .+.+ ...++.+
T Consensus 323 ----------~~gnpla~aaala~L~~l--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG-----~Glm~gi 382 (459)
T PRK06931 323 ----------FRGNQLAMATGLTTLKIL--KE---ENLAQNAAERGEWLKAQLAELQKRYPCIGNVRG-----RGLMIGI 382 (459)
T ss_pred ----------CCCCHHHHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEec-----CceEEEE
Confidence 123443333334444443 22 23445555555555555543 3322 1222 2233444
Q ss_pred EeccCCCCCcCCCCCCCCCCCC-C---ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 418 NIHSSTINSSLGENTKTETDKP-L---HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~-l---~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
.+.. +.. ..+-.+.. . ....+.+.+.+ .||.+.+.. .
T Consensus 383 el~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~-------~------------------------ 423 (459)
T PRK06931 383 EIVD-ERQ------PADAMGSYPADGELAAAIQKACFE-NGLLLERGG-------R------------------------ 423 (459)
T ss_pred EEcc-Ccc------cccccccCCccHHHHHHHHHHHHH-CCcEEeecC-------C------------------------
Confidence 4432 100 00000000 0 12345555655 588876321 0
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+..+|+.+++.+|++|++++++++++++....
T Consensus 424 ~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 424 NGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred CCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 136799999999999999999999999987643
No 367
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.35 E-value=1.5e-09 Score=117.81 Aligned_cols=213 Identities=12% Similarity=0.071 Sum_probs=121.3
Q ss_pred CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcc-cc--cCCCCCC-CC
Q 038499 217 DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYV-EI--DVRSGQT-DG 288 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~-~i--d~~~~~~-~~ 288 (609)
++++|++++.++ .+++..|++..+....|.+.| +++|.++|++||+++|+|+++.+-.. .- -....+. ..
T Consensus 237 ~l~~l~~~l~~~--~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~ 314 (464)
T TIGR00699 237 CLEEVEDLIKKW--HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDP 314 (464)
T ss_pred HHHHHHHHHHhc--CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCC
Confidence 456677777632 245778889999988999988 89999999999999999999753211 10 0011111 13
Q ss_pred ccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHH
Q 038499 289 YDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALA 368 (609)
Q Consensus 289 ~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~ 368 (609)
.|+++++ |.+|+. |+++.+ +. +....+...++ | ..|.|...+...+.+.
T Consensus 315 PDi~t~g--K~lg~g---G~~~~~-~~--~~~~~~~~~~~-T----------------------~~gnp~~~aaa~a~L~ 363 (464)
T TIGR00699 315 PDMVTFS--KKFQTA---GYFFHD-PA--FRPNKPYRQFN-T----------------------WMGDPSRALILREIIQ 363 (464)
T ss_pred CCEEEeh--hhhccC---Cccccc-hh--ccCCCCccccc-C----------------------CCCCHHHHHHHHHHHH
Confidence 6887775 998521 333332 22 11111111110 0 1233333343444555
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCc-eE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCCh
Q 038499 369 FWVKEYIGHEVIKKQEETYIERALERLLP----NQN-IK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442 (609)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~-i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 442 (609)
.. + .+.+.++..++.+++.+.|++ +|. +. +-+. .+..++.+.+.. . ...
T Consensus 364 ~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~---G~Glm~gie~~~-~----------------~~~ 418 (464)
T TIGR00699 364 EI--K---RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGK---GRGTFIAWDTPD-E----------------AKR 418 (464)
T ss_pred HH--H---hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc---CeEEEEEEecCC-H----------------HHH
Confidence 43 2 223444554455555555543 441 21 1110 133444444422 1 124
Q ss_pred HHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 443 ~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
..+.+.+.+ .||.++.. ....+||.+++.+|++|++.++++|+++
T Consensus 419 ~~i~~~~~~-~Gvl~~~~---------------------------------g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 419 DKLLKKARN-NGVNIGGC---------------------------------GVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHHH-CCcEEecC---------------------------------CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 567777766 49988621 1368999999999999999999999875
No 368
>PRK06148 hypothetical protein; Provisional
Probab=99.33 E-value=2.3e-09 Score=127.27 Aligned_cols=344 Identities=18% Similarity=0.175 Sum_probs=191.3
Q ss_pred eEEecCCC----CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 038499 78 LTYADHTA----SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 78 ~vyld~~a----~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal 153 (609)
.-|+|..+ .|-..+.|.+++.+++... ++++. + ..+...++.++|.+.+..+-+ .+.|+.|||.+.
T Consensus 624 ~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l--~~~~~-~-----~~~~~~~lAe~L~~~~p~~~~-~v~f~nSGsEA~- 693 (1013)
T PRK06148 624 RAYLDCFNNVCHVGHAHPRVVAAAARQAARL--NTNTR-Y-----LHDAIVAYAERLTATLPDGLT-VAFFVNSGSEAN- 693 (1013)
T ss_pred CEEEEcccChhhcCCCCHHHHHHHHHHHhhc--CCcCC-c-----CCHHHHHHHHHHHHhCCCCcC-EEEEeCCcHHHH-
Confidence 35888753 3556789999999988754 33321 1 133456677777777754333 789998888863
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHc--------C----ceEEEEecCC--CCCC--
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQS--------L----AEVVEIGLDD--DGLL-- 216 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~--------G----~~vv~v~~~~--~g~l-- 216 (609)
...+++-- . -.|.+ .|++-...||+... ..... + ..+..++... .+..
T Consensus 694 e~AlklAr-------------~-~tGr~-~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 758 (1013)
T PRK06148 694 SLALRLAR-------------A-HTGQR-DAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERW 758 (1013)
T ss_pred HHHHHHHH-------------H-hcCCC-eEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCC
Confidence 32222210 0 12322 45555555555432 11111 1 1122222110 0001
Q ss_pred -C-------HHHHHHHHhhh-ccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccccc---
Q 038499 217 -D-------IEALRSKLELY-KDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEI--- 279 (609)
Q Consensus 217 -d-------~e~L~~al~~~-~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~i--- 279 (609)
+ .+++++.+... ...+++..+++..+....|.+.+ +++|.++|++||+++|+|+++.+ |-...
T Consensus 759 ~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~ 838 (1013)
T PRK06148 759 PDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWW 838 (1013)
T ss_pred ChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcch
Confidence 1 24455555421 11235778888888888898877 88999999999999999999753 32211
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
-....+ -..|+++++ |.+||...+|.+++++++ .+.+.+....++ ...|.|--
T Consensus 839 a~e~~g-v~PDivt~g--K~lggG~Plgav~~~~ei--~~~~~~g~~~~~----------------------Tf~gnpla 891 (1013)
T PRK06148 839 AFETQG-VVPDIVTMG--KPIGNGHPMGAVVTTREI--ADSFDNGMEYFN----------------------TFGGNPVS 891 (1013)
T ss_pred hhhhcC-CCcceeeec--ccccCCcceEEEEEcHHH--HhhccCCCcccc----------------------CCCCCHHH
Confidence 111111 145888875 999877678999999988 333321100000 01233433
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce-EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI-KILGNTSTKRQAILSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~ 434 (609)
.....+.++.+ + .+.+.++.+++.+++++.|++ .|-+ ++.+ ...++.+.+.. +..
T Consensus 892 ~aaa~a~L~~i--~---~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG-----~Gl~~gvel~~-~~~--------- 951 (1013)
T PRK06148 892 CAIGLAVLDII--E---DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG-----MGLFLGIELVT-DRK--------- 951 (1013)
T ss_pred HHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEee-----eceEEEEEecC-Ccc---------
Confidence 33334444443 2 234555666666666666654 3322 2222 12233333322 100
Q ss_pred CCCCC--CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 435 ETDKP--LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 435 ~~~~~--l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
.... .....+...|.+ .||.+.+. ++ ....+|+.+++.+|++|++
T Consensus 952 -~~~~~~~~~~~i~~~~~~-~Gvl~~~~----g~---------------------------~~~vlr~~Ppl~it~~~id 998 (1013)
T PRK06148 952 -TKAPATAIARYVKNGARE-RGILIGTE----GP---------------------------HDNVLKIRPPLIFSRADAD 998 (1013)
T ss_pred -ccCccHHHHHHHHHHHHh-CCeEEecc----CC---------------------------CCCEEEEeCCccCCHHHHH
Confidence 0000 113456777766 59988631 11 1378999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q 038499 513 FTLEALEFIAIYGQ 526 (609)
Q Consensus 513 ~ll~al~~v~~~~~ 526 (609)
++++++++++...+
T Consensus 999 ~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 999 HLLEVLDDVLAAAL 1012 (1013)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987654
No 369
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.32 E-value=1.4e-09 Score=118.08 Aligned_cols=360 Identities=14% Similarity=0.052 Sum_probs=178.4
Q ss_pred CCCccccCC-CCCCceEEecCCCC------CCChHHHH--HHHHHhhcCCc-cCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 038499 64 GKNAEFDSP-FGKRRLTYADHTAS------GRSLRYIE--NYIINNVLPFY-GNTHTCDSYVGQHTTNMVHEASNYIKKC 133 (609)
Q Consensus 64 g~~~~~~~p-~g~~~~vyld~~a~------g~~~~~v~--~ai~~~~~~~~-~n~~~~~~~~~~~~~~~~~e~r~~ia~~ 133 (609)
+.+.++.+. .|++ |+|..++ |-..+.|. +++.+++.... ..+... .. ......++.++++++
T Consensus 26 a~G~~l~D~~dG~~---ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~-~~----~~~~~~~l~~~l~~~ 97 (431)
T TIGR03251 26 SRGSVLVDARDGRR---YLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNS-DV----YTVAMARFVDTFARV 97 (431)
T ss_pred ccCCEEEECCCCCC---hhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccC-CC----CCHHHHHHHHHHHHh
Confidence 445666664 6643 8887654 55678888 88888776431 111110 11 123344555566666
Q ss_pred hCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccch-HHHHHHcCce-EE----
Q 038499 134 LGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSN-LLSWRQSLAE-VV---- 206 (609)
Q Consensus 134 ~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~-~~~~~~~G~~-vv---- 206 (609)
.+.+.-+.+.|+.|||.+ +...+++-- .... |. ....-++. ++..|+.-...||+. ..++...|.. ..
T Consensus 98 ~~~~~~~~v~f~~sGsEA-ve~AlklAr-~~t~--~~-~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 172 (431)
T TIGR03251 98 LGDPALPHLFFIEGGALA-VENALKTAF-DWKS--RH-NQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARF 172 (431)
T ss_pred cCCCCcCEEEEeCCcHHH-HHHHHHHHH-HHhh--cc-hhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCC
Confidence 532222489999889886 222222210 0000 00 00000111 012455555555544 3333222211 00
Q ss_pred ------EE--e-----cCCCC--------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHH
Q 038499 207 ------EI--G-----LDDDG--------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQ 261 (609)
Q Consensus 207 ------~v--~-----~~~~g--------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~ 261 (609)
.+ | .+... .-+++++++.+.. ..+++..++++.+....|.+.+ +++|.++|++
T Consensus 173 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~ 250 (431)
T TIGR03251 173 PKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE--RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDE 250 (431)
T ss_pred CCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh--CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHH
Confidence 01 1 00000 0124455566653 2257789999999988998854 7889999999
Q ss_pred hCCeEEEecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccc
Q 038499 262 YGGFACFDFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 262 ~g~~vivD~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
||+++|+|++++ ++.... ...... -.+|+++++ |.+ |. .|++. .+++..+ .... .++..
T Consensus 251 ~g~llI~DEV~tG~GrtG~~~a~~~~g-v~PDi~~~g--K~~--~~-~g~~~-~~~i~~~--~~~~-~~~~~-------- 312 (431)
T TIGR03251 251 HDALLIFDEVQTGVGLTGTAWAYQQLG-VQPDIVAFG--KKT--QV-CGIMA-GRRVDEV--ADNV-FAVPS-------- 312 (431)
T ss_pred cCCEEEEecchhccCccchHHHHHhcC-CCCCEEEec--ccC--cc-ceEEe-cchHHHh--hhhc-ccCcc--------
Confidence 999999999977 333210 001110 146998876 554 33 35554 4432100 0000 00000
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEE
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGH-EVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSF 417 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~-~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f 417 (609)
.......|+|.-.....++++.+ +..+. +.+.+....+.+.+.+...+.+++ .... ..+..++.+
T Consensus 313 ---------~~~~T~~gnpl~~aaa~a~L~~l--~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~--i~~v-rg~G~~~~i 378 (431)
T TIGR03251 313 ---------RLNSTWGGNLVDMVRATRILEII--EEERLVDNARVQGAHLLARLHELAAEFPHL--VSNP-RGRGLMCAF 378 (431)
T ss_pred ---------ccCCCCCCCHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHhCccc--eecc-cccceeEEE
Confidence 00001134444444445555544 22232 344444444444444433334322 2221 112334444
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
.+.. . -....+.+.|.+ .||.+.+. ....
T Consensus 379 ~~~~-~----------------~~~~~~~~~l~~-~Gvl~~~~---------------------------------g~~~ 407 (431)
T TIGR03251 379 DLPS-T----------------ADRDEVIRQLYR-EGVLLLGC---------------------------------GERS 407 (431)
T ss_pred EeCC-H----------------HHHHHHHHHHHh-CCeEEecC---------------------------------CCCe
Confidence 4432 1 123467777765 59988631 1256
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v 521 (609)
+|+++++.+|++|+++++++|.++
T Consensus 408 lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 408 IRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred EEEECCccCCHHHHHHHHHHHHhC
Confidence 999999999999999999999763
No 370
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.30 E-value=1.6e-10 Score=119.24 Aligned_cols=195 Identities=18% Similarity=0.149 Sum_probs=128.0
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
...+.+++++...+..+ -+-.. +. .+....++.......+.+......+.++ +++++++.++...+.
T Consensus 38 ~~~~e~iea~~~~~~~~-v~Le~--~l---~~g~~~~R~~~~~~~~~~~~~aea~~iv-nnn~aAVll~~~al~------ 104 (395)
T COG1921 38 LYSPEAIEAMKEAMRAP-VELET--DL---KTGKRGARLTELAELLCGLTGAEAAAIV-NNNAAAVLLTLNALA------ 104 (395)
T ss_pred cCCHHHHHHHHHHhccc-ceeee--ec---ccchhhHHHHHHHHHHhcccchhheeeE-CCcHHHHHHHHhhhc------
Confidence 44566777776655432 22211 11 1112222333333334444322356666 556667777766653
Q ss_pred HHHHHHhhhcCCCceEEEECC-----CCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecc
Q 038499 168 LREKLIKCLRDEERWVVFVGP-----HEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSAC 242 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~-----~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~ 242 (609)
++. +|+++- ..|+.....++..|++++++... +.-...+++.+|. +++.++.-.+.
T Consensus 105 ----------~~~--EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-----e~ta~llkV~s 165 (395)
T COG1921 105 ----------EGK--EVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-----ENTALLLKVHS 165 (395)
T ss_pred ----------cCC--eEEEEccccccCCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-----cCCeeEEEEee
Confidence 233 233321 35667778899999999999744 4467899999999 57887666666
Q ss_pred cCccccc--cCHHHHHHHHHHhCCeEEEeccccCCcc-cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh
Q 038499 243 SNVTGIY--SDTRSIARLLHQYGGFACFDFAASGPYV-EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY 316 (609)
Q Consensus 243 sn~TG~~--~dl~~I~~la~~~g~~vivD~A~~~~~~-~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~ 316 (609)
+|. |.. .+.++++++||+||+++++|.+++.... ..+.++.-..|+|.|++|++|+||||. .|+++.+|+++
T Consensus 166 ~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI 240 (395)
T COG1921 166 SNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELI 240 (395)
T ss_pred ccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHH
Confidence 665 554 5678899999999999999999766422 233333333589999999999999999 59999999993
No 371
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.28 E-value=3e-09 Score=107.64 Aligned_cols=293 Identities=15% Similarity=0.091 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH
Q 038499 120 TNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (609)
.-.++.+.+.|.+.=| ++++ +|.+| +|++.++..++.++. -.+.+ -|+++-+-|+-+-..
T Consensus 116 ~~vR~~VA~~I~rRDG~p~~p~-dI~LT-~GAS~ai~~il~l~~--------------~~~~~--GvliPiPQYPLYsAt 177 (475)
T KOG0258|consen 116 PGVRKHVAEFIERRDGIPADPE-DIFLT-TGASPAIRSILSLLI--------------AGKKT--GVLIPIPQYPLYSAT 177 (475)
T ss_pred hhHHHHHHHHHHhccCCCCCHH-Heeec-CCCcHHHHHHHHHHh--------------cCCCC--ceEeecCCCchhHHH
Confidence 3333444444444434 3344 78887 788889999888774 12333 699999999988888
Q ss_pred HHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccc
Q 038499 198 WRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~ 272 (609)
....|+..+..-+++ ++.+|.++|++.+.+....-+++++++-+|-||||.+.. +++|..+|+++|+.++.|+.+
T Consensus 178 i~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVY 257 (475)
T KOG0258|consen 178 ISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVY 257 (475)
T ss_pred HHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHH
Confidence 888898888777765 689999999999987665568898888899999999965 788999999999999999983
Q ss_pred c-----CCccc-------ccCCCCCCCCccEEE-EcCCCCCCC---CCCcEEEEEe---chh----hccC--CCCCCccC
Q 038499 273 S-----GPYVE-------IDVRSGQTDGYDAIF-LSTHKFLGG---PGSPGILLMT---KAL----YQLG--SFPPSTCG 327 (609)
Q Consensus 273 ~-----~~~~~-------id~~~~~~~~~D~v~-~S~hK~lgg---p~g~G~L~~~---~~~----~~l~--~~~p~~~g 327 (609)
- .+... ..|.+.....+-.++ .|.||.+.| +.| |++=+- ++. .++. ++-|...|
T Consensus 258 Q~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~n~~prv~~qi~Kl~si~lc~~V~G 336 (475)
T KOG0258|consen 258 QDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESLNRDPRVKQQIKKLASIKLCPQVSG 336 (475)
T ss_pred HhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-CeeecccCChhHHHHHHHHHhhhhcCCccc
Confidence 2 11011 122221111222233 367787743 343 654332 111 1110 11111111
Q ss_pred CCceEe-ecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCC
Q 038499 328 GGTVNY-VNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGN 406 (609)
Q Consensus 328 gg~v~~-~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~ 406 (609)
---++- |++ -..|.+..-. +..+ .+.|.+..+..+..+.+.+.+++|+....+
T Consensus 337 Q~~vdl~VnP---------------P~Pgd~Sy~~--------~~~E---kd~il~~l~~ra~l~~~~~ns~~gi~cn~~ 390 (475)
T KOG0258|consen 337 QKLVDLVVNP---------------PKPGDPSYDL--------FSSE---KDGILSSLRSRAKLTEDAFNSLEGISCNPV 390 (475)
T ss_pred hhhhceecCC---------------CCCCCcchhh--------hhhh---hHhHHHHHHHHhHHHHHHHhhcCceeeccC
Confidence 111000 110 0112222222 1111 344556666677788889999999988765
Q ss_pred CCCCCcceEEEEeccCCCCCcCCCCCCCCCCC-CCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 407 TSTKRQAILSFNIHSSTINSSLGENTKTETDK-PLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 407 ~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~-~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
. ....+|-...=+.+ -....+.. .....+.+..|++.-||.+.+|+.|..+
T Consensus 391 q----GAMY~fP~i~lP~k-----aie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~ 442 (475)
T KOG0258|consen 391 Q----GAMYLFPQISLPPK-----AIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQK 442 (475)
T ss_pred c----cceeecccccCCHH-----HHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCC
Confidence 3 34444432210000 00000001 1234577888889999999999987743
No 372
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.26 E-value=7.5e-09 Score=112.61 Aligned_cols=358 Identities=13% Similarity=0.064 Sum_probs=183.0
Q ss_pred CCCccccCC-CCCCceEEecCCCC------CCChHHHHH--HHHHhhcCCcc-CCCCCCchhhHHHHHHHHHHHHHHHHH
Q 038499 64 GKNAEFDSP-FGKRRLTYADHTAS------GRSLRYIEN--YIINNVLPFYG-NTHTCDSYVGQHTTNMVHEASNYIKKC 133 (609)
Q Consensus 64 g~~~~~~~p-~g~~~~vyld~~a~------g~~~~~v~~--ai~~~~~~~~~-n~~~~~~~~~~~~~~~~~e~r~~ia~~ 133 (609)
+.+.++.+. .|++ |+|..++ |-..+.|.+ ++.+++..... .+... .. ..+...++.+.|+++
T Consensus 33 a~G~~l~D~~dG~~---ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~-~~----~~~~~~~la~~l~~~ 104 (443)
T PRK08297 33 SQGSYLVDARTGRR---YLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNS-DV----YTVEMARFVDTFARV 104 (443)
T ss_pred ccCCEEEECCCCCE---eeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccC-Cc----CCHHHHHHHHHHHhh
Confidence 555666663 6653 9997654 667788988 99888865321 11110 11 123345566667777
Q ss_pred hCCCCCCcEEEeCChHHHHHHHHHHHh-cccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHcCce-------
Q 038499 134 LGGGQEDAMIFCGSGTTAAIKRLQEVM-GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQSLAE------- 204 (609)
Q Consensus 134 ~g~~~~~~vift~sGttaal~~l~~~l-~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~G~~------- 204 (609)
.+.+.-+.|.|+.||+.+. ...+++- ... . +.+..+...+.++..|+.-...||+.. ..+...+..
T Consensus 105 ~~p~~~~~v~f~~SGsEAv-e~AlKlAr~~~--~--~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~ 179 (443)
T PRK08297 105 LGDPELPHLFFVDGGALAV-ENALKVAFDWK--S--RKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARF 179 (443)
T ss_pred cCCCCCCEEEEeCchHHHH-HHHHHHHHHHh--h--ccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccC
Confidence 6322224899998888863 2222221 000 0 000000000112335665555555443 333222210
Q ss_pred -E---EEEecCC-----CC-C---------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHH
Q 038499 205 -V---VEIGLDD-----DG-L---------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQ 261 (609)
Q Consensus 205 -v---v~v~~~~-----~g-~---------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~ 261 (609)
. ..++... .+ . -+++++++.+.+ +.+++..+++..+....|.+.| +++|.++|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~ 257 (443)
T PRK08297 180 PKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER--HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDE 257 (443)
T ss_pred CCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 0 0011000 00 0 124556666653 2256788889988888888744 7889999999
Q ss_pred hCCeEEEeccccC-Cccccc--CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccc
Q 038499 262 YGGFACFDFAASG-PYVEID--VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 262 ~g~~vivD~A~~~-~~~~id--~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
||+++|+|+++.+ +...-- ..... -.+|+++++ |.++ +|.+++.+++..+ ......+.+.
T Consensus 258 ~g~llI~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--K~l~----~~a~l~~~~i~~~--~~~~~~~~~~-------- 320 (443)
T PRK08297 258 HDALLIFDEVQTGVGLTGTAWAYQQLG-VRPDIVAFG--KKTQ----VCGIMAGRRVDEV--EDNVFAVSSR-------- 320 (443)
T ss_pred cCCEEEEechhhccCccchHHHHHhcC-CCCCEEEec--cccc----ccceecchHHHHh--hhhhccCccc--------
Confidence 9999999999753 332110 00010 146988864 8773 2333444443111 0000000000
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCce--EEeCCCCCCCc
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNI--KILGNTSTKRQ 412 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i--~v~~~~~~~r~ 412 (609)
...-..|.|--.....+.++.+ + .+.+.++.+++.+++.+.|++ .|.+ .+-+ +.
T Consensus 321 ----------~~~T~~gnpl~~aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-----~G 380 (443)
T PRK08297 321 ----------INSTWGGNLVDMVRARRILEVI--E---EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRG-----RG 380 (443)
T ss_pred ----------cCCCCCccHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec-----cc
Confidence 0000012332222233334333 2 223445556666666665543 3422 3322 22
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
.++.+.+.. . .....+.+.|.+ .||.+.++
T Consensus 381 ~~~~i~~~~-~----------------~~~~~~~~~l~~-~Gvl~~~~-------------------------------- 410 (443)
T PRK08297 381 LMCAFDLPT-T----------------ADRDEVIRRLWE-EGVLVLPC-------------------------------- 410 (443)
T ss_pred eEEEEEecC-H----------------HHHHHHHHHHHH-CCEEEecC--------------------------------
Confidence 344444432 1 124567777765 59988631
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
....+|+++++.+|++|+++++++|++++..
T Consensus 411 -~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 411 -GERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred -CCCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 0256899999999999999999999998865
No 373
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.25 E-value=8e-09 Score=112.17 Aligned_cols=212 Identities=16% Similarity=0.117 Sum_probs=117.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ -|+|..++ |-..+.|.+++.+++..... .. + ......++.+.|.+.+...
T Consensus 37 ~~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~---~~-~-----~~~~~~~la~~l~~~~p~~ 104 (431)
T PRK06209 37 GSGAHVWDVDGN---EYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN---FT-R-----PSAIELDAAESFLELIDGA 104 (431)
T ss_pred ccCCEEEeCCCC---EEEEccccccchhcCCCCHHHHHHHHHHHHhCcC---CC-C-----CCHHHHHHHHHHHHhCCcc
Confidence 444555555554 38887643 55678999999998875321 10 1 1222335667777776422
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEEC-CCCccchHHHHHH------cCc------e
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVG-PHEHHSNLLSWRQ------SLA------E 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~------~G~------~ 204 (609)
+.+.|+.|||.+. ...+++-- .. .|.+ .|+.. ...||+.. .|.. .+. .
T Consensus 105 --~~v~f~~sGseA~-e~AlklAr-------------~~-tgr~-~i~~~~~~~~h~~~-~~~~g~~~~~~~~~~~~~~~ 165 (431)
T PRK06209 105 --DMVKFCKNGSDAT-SAAVRLAR-------------AY-TGRD-LVARCADHPFFSTD-DWFIGTTPMSAGIPASVSAL 165 (431)
T ss_pred --ceEEEecCHHHHH-HHHHHHHH-------------HH-hCCC-eEEEeccCcccccc-ccccccCCCCCCCChhHhcc
Confidence 3799998888863 33322210 01 2322 44443 22222211 0100 011 0
Q ss_pred EEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc-cCCC
Q 038499 205 VVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI-DVRS 283 (609)
Q Consensus 205 vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i-d~~~ 283 (609)
+..++ .-|+++|++++++. .+++.+|++.......+....+++|.++|++||+++|+|+++.+-.... -...
T Consensus 166 ~~~~~-----~~d~~~l~~~l~~~--~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~ 238 (431)
T PRK06209 166 TVTFR-----YNDIASLEALFEDH--PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK 238 (431)
T ss_pred ccccC-----CCCHHHHHHHHHhC--CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH
Confidence 11112 12789999998642 1345677776654432333348999999999999999999975321110 0111
Q ss_pred CCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 284 GQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
...-.+|++++ .|.+||...+|++++++++
T Consensus 239 ~~gv~PDi~t~--gK~lggG~p~~av~~~~~i 268 (431)
T PRK06209 239 LYGIVPDLSCF--GKALGNGFAVSALAGKREY 268 (431)
T ss_pred HhCCCcceeee--hhhhcCCcccEEEEEHHHH
Confidence 00013577655 5999875446888888887
No 374
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=2.4e-09 Score=109.02 Aligned_cols=330 Identities=18% Similarity=0.223 Sum_probs=195.8
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHH-hCCCCC----CcE-EEeCChHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKC-LGGGQE----DAM-IFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~-~g~~~~----~~v-ift~sGttaa 152 (609)
+|-|-..-.|..+.|.++-...+.. ..+..|..-.+ ..+..+.++++ +|.+.. +.| .+...|.|+|
T Consensus 35 vY~de~Gk~pvl~aV~~Ae~~l~~~----~~~k~Yl~i~G----~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGA 106 (396)
T COG1448 35 VYKDEDGKTPVLRAVKKAEKRLLEQ----EKTKNYLPIEG----LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGA 106 (396)
T ss_pred eeeCCCCCcchhHHHHHHHHHhhcc----ccccccCCcCC----cHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchH
Confidence 7889888888888887765433321 11111222222 23334444444 554311 122 2222566668
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec-CC-CCCCCHHHHHHHHhhhcc
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL-DD-DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~-~g~ld~e~L~~al~~~~~ 230 (609)
+...+..+.. ..+.. .|.++++.++.....+...|.+|...|. |. +..+|.+.+.+.|++..
T Consensus 107 L~~~A~fl~~-------------~~~~~--~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~- 170 (396)
T COG1448 107 LRVAADFLAR-------------FFPDA--TVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP- 170 (396)
T ss_pred HHHHHHHHHH-------------hCCCc--eEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCC-
Confidence 8887776631 23434 5999999999999999999999998885 33 45699999999888531
Q ss_pred CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcccccCCCC-----CCCCc-cEEEEcCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVEIDVRSG-----QTDGY-DAIFLSTHKFLG 301 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~~id~~~~-----~~~~~-D~v~~S~hK~lg 301 (609)
.+..++.=.-|+||||.-... ++|+++.++.|.+.++|.|+-+....++-... ...+. -+|+.|++|.||
T Consensus 171 -~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 171 -EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred -CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 233344445678999998664 56899999999999999995432222321110 00122 477889999997
Q ss_pred CCCC--cEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh-----HHHHH---HHHHHHH
Q 038499 302 GPGS--PGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ-----VIQMI---RAALAFW 370 (609)
Q Consensus 302 gp~g--~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~-----i~~~~---~aal~~~ 370 (609)
..| +|.+.+ .++.-...++ ...+... .|-...+|+ +++.+ ...-+.|
T Consensus 250 -LYgERVGa~~vva~~~~~a~~v--------------------~sqlk~~-iR~~ySnPP~~Ga~vva~IL~~p~Lra~W 307 (396)
T COG1448 250 -LYGERVGALSVVAEDAEEADRV--------------------LSQLKAI-IRTNYSNPPAHGAAVVATILNNPELRAEW 307 (396)
T ss_pred -hhhhccceeEEEeCCHHHHHHH--------------------HHHHHHH-HHhccCCCchhhHHHHHHHhCCHHHHHHH
Confidence 544 565443 2221001111 0001111 111122222 22221 1222334
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhCCC-C--ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHH
Q 038499 371 VKEYIGHEVIKKQEETYIERALERLLPN-Q--NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVAT 447 (609)
Q Consensus 371 ~~~~~g~~~i~~~~~~l~~~~~~~L~~~-p--~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 447 (609)
.++ .+.+++|+.++++.+.+.|++. + ++..+.. ..+.|++. + ++.++|.+
T Consensus 308 ~~E---l~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~----Q~GMFsy~--G------------------ls~~QV~r 360 (396)
T COG1448 308 EQE---LEEMRQRILEMRQALVDALKALGAPRNFDFIIS----QRGMFSYT--G------------------LSPEQVDR 360 (396)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh----cCceeecC--C------------------CCHHHHHH
Confidence 333 5678899999999999999873 1 2444432 34566654 2 45666665
Q ss_pred HHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 448 LLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 448 ~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+ .+++||.+.. .| |+++.- .++..+++++++|..+
T Consensus 361 L-ree~~IY~v~-----------------------------------sG--Ri~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 361 L-REEFGIYLVA-----------------------------------SG--RINVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred H-HHhccEEEec-----------------------------------CC--eeeecc-CChhhHHHHHHHHHhh
Confidence 4 4779998762 24 888843 6889999999999876
No 375
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.21 E-value=2.1e-09 Score=104.46 Aligned_cols=341 Identities=16% Similarity=0.148 Sum_probs=217.5
Q ss_pred CChHHHHHHHHHhhcCCccCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH-HHhcccc
Q 038499 88 RSLRYIENYIINNVLPFYGNTH--TCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ-EVMGIAV 164 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~--~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~-~~l~~~~ 164 (609)
.+|..|+..+++.+..+.+-.- .+.++.+......+.+++..++++++.+.+..|+|..+|.|.-+..+. ...+
T Consensus 17 klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~g--- 93 (370)
T KOG2790|consen 17 KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIG--- 93 (370)
T ss_pred cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhc---
Confidence 3678888888888887643221 123556777889999999999999999988788776555554232221 1111
Q ss_pred hhhHHHHHHhhhcCCC-ceEEEECCCCccchHHHHHHcCce-EEEEecCC-C-C-CCCHHHHHHHHhhhccCCCceEEEE
Q 038499 165 PSILREKLIKCLRDEE-RWVVFVGPHEHHSNLLSWRQSLAE-VVEIGLDD-D-G-LLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~~~G~~-vv~v~~~~-~-g-~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
++.|+ -..|+++...--+...+- ..|.. .+..+..+ . | ..|.+.++. + ++.+.+..
T Consensus 94 -----------lK~g~~AdYiVTGsWS~KA~~EAk-k~~~~~~V~~~~k~y~ygkvPd~~~w~~--~-----~da~yvyy 154 (370)
T KOG2790|consen 94 -----------LKHGRCADYVVTGSWSAKAAEEAK-KYGTPNIVIPKLKSYTYGKVPDPSTWEL--N-----PDASYVYY 154 (370)
T ss_pred -----------cccCCccceEEeccccHHHHHHHH-hhCCceEEeccccccccCcCCChhhccc--C-----CCccEEEE
Confidence 23331 126777765444433222 23432 33333322 1 2 334454432 2 45568888
Q ss_pred ecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccC
Q 038499 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLG 319 (609)
Q Consensus 240 s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~ 319 (609)
|...++-|+-.|.-. +-.-+|+.++.|-..-+-..++|+... ++++...+|.+| |.|.-++++++++ +.
T Consensus 155 CaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk~-----gvi~aGAQKN~G-~aG~Tvvivr~dl--lg 223 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSKF-----GVIFAGAQKNVG-PAGVTVVIVRKDL--LG 223 (370)
T ss_pred ecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchhc-----ceEEeccccccC-ccccEEEEEehhh--hc
Confidence 888888898644222 223468999999988887889998764 889999999998 8889999999999 55
Q ss_pred CCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 320 SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+..+.++. -.+|..-.....-..||+..++. ...+.+ +++..|...+.+...+-.+.+.+.+.+
T Consensus 224 ~~~~~tP~-------------v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~-il~~GGl~a~e~~n~~KskllYd~iD~ 289 (370)
T KOG2790|consen 224 NALDITPS-------------VLDYKIMDKNNSLYNTPPCFGIYVMGLVFEW-ILEKGGLAAMEKLNQEKSKLLYDAIDN 289 (370)
T ss_pred ccccCCcc-------------ccceeeeccccccccCCCeeeeeehhhHHHH-HHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 44333221 01111111222234566665543 344444 446789999999999999999999988
Q ss_pred CCceEEeCC-CCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 398 NQNIKILGN-TSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 398 ~p~i~v~~~-~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
..++-.-.- ....+.-++.|.+.+ +. |..+++.+.. ++.=|++. ||+
T Consensus 290 s~gfy~cpVe~~~RS~MNV~Fri~~-d~---------------Le~eFLkeA~-~~~mv~LK---------GhR------ 337 (370)
T KOG2790|consen 290 SNGFYRCPVEPSVRSRMNVPFRIEK-DE---------------LEAEFLKEAA-KEHMVQLK---------GHR------ 337 (370)
T ss_pred cCCeEEcccchhhhhhcccceeecc-hH---------------HHHHHHHHHH-Hhhhhccc---------ccc------
Confidence 766644322 122345577888876 32 5666666666 44455554 333
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.-|.+|.|+....+-++++.+++.|++..+.
T Consensus 338 -----------------SVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 338 -----------------SVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred -----------------ccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 1388999998889999999999999987653
No 376
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.18 E-value=1.1e-08 Score=107.82 Aligned_cols=334 Identities=14% Similarity=0.095 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCCceEEEECC-------CCccc-
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEERWVVFVGP-------HEHHS- 193 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~-------~~h~s- 193 (609)
+.++++.+++++|.+ .+++|.+|..+ =+.+..++ ++ +|+ .+.+.. ..|.-
T Consensus 76 v~~Lee~vael~G~E---~alpthqGRga-E~Il~~~~---------------~~~~g~--e~g~~~~~~~v~hn~~fet 134 (467)
T TIGR02617 76 YYALAESVKNIFGYQ---YTIPTHQGRGA-EQIYIPVL---------------IKKREQ--EKGLDRSKMVAFSNYFFDT 134 (467)
T ss_pred HHHHHHHHHHHhCCc---eEEECCCCchH-HHHHHHhh---------------cccccc--cccccccccccceEEEEec
Confidence 557889999999996 56887777543 34444443 23 566 344333 22222
Q ss_pred hHHHHHHcCceEEEEec----------CCCCCCCHHHHHHHHhhhccCCCceEEEEecccC-ccccccC---HHHHHHHH
Q 038499 194 NLLSWRQSLAEVVEIGL----------DDDGLLDIEALRSKLELYKDAKRPILGSFSACSN-VTGIYSD---TRSIARLL 259 (609)
Q Consensus 194 ~~~~~~~~G~~vv~v~~----------~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn-~TG~~~d---l~~I~~la 259 (609)
........|+.++.++. ..+|.+|+++|+++|+.+.. ++.-.+..+..+| --|...+ ++++.++|
T Consensus 135 t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~v~~tlt~N~~GGqpvslenlr~V~~la 213 (467)
T TIGR02617 135 TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPYIVATITCNSAGGQPVSLANLKAVYEIA 213 (467)
T ss_pred chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCceeeeeeEEEecCCCEEeCHHHHHHHHHHH
Confidence 22345567888777632 23689999999999985311 1222222222233 3577776 56789999
Q ss_pred HHhCCeEEEeccc----cC-------CcccccCCCCC---CCCccEEEEcCCCCCCCCCCcEEEEEech---h-hc-cCC
Q 038499 260 HQYGGFACFDFAA----SG-------PYVEIDVRSGQ---TDGYDAIFLSTHKFLGGPGSPGILLMTKA---L-YQ-LGS 320 (609)
Q Consensus 260 ~~~g~~vivD~A~----~~-------~~~~id~~~~~---~~~~D~v~~S~hK~lggp~g~G~L~~~~~---~-~~-l~~ 320 (609)
++||+.+|.|+|- +. ++...+++++. ...+|.+++|++|-+|.|-| |+|+++++ - +. .+.
T Consensus 214 ~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~ 292 (467)
T TIGR02617 214 KKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRT 292 (467)
T ss_pred HHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHh
Confidence 9999999999972 21 23333333221 24789999999999999987 89999887 2 11 111
Q ss_pred CCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 321 FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
....+-| ....|..+ +--..+++.-+.+....+.+..|. .-.+|+.+.|.+. |
T Consensus 293 ~~i~~EG-----------------------f~tYGGla--grd~ea~a~Gl~e~~~~~yl~~ri-~qv~yl~~~L~~~-G 345 (467)
T TIGR02617 293 LCVVQEG-----------------------FPTYGGLE--GGAMERLAVGLYDGMNLDWLAYRI-NQVQYLVNGLEEI-G 345 (467)
T ss_pred hcccccC-----------------------CcCcCchh--HHHHHHHHhhhhhcccHHHHHHHH-HHHHHHHHHHHhC-C
Confidence 1111111 11112111 111122222233444444444444 4567888888765 6
Q ss_pred eEEeCCCCCCCcceEEEE----eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec-cCcccCChhhhhhcCCC
Q 038499 401 IKILGNTSTKRQAILSFN----IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR-GGCACAGPYGHHLLDLD 475 (609)
Q Consensus 401 i~v~~~~~~~r~~~~~f~----~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~-~G~~ca~p~~~~ll~i~ 475 (609)
+.+.. . .++-.|. +.+ .. ...-.....++..|....||-.. -|+ .+++-+
T Consensus 346 vpi~~-~----Gghav~iDa~~~lp-hi-----------p~~~fpa~al~~~ly~~~GiR~~e~G~--------~~~~rd 400 (467)
T TIGR02617 346 VVCQQ-A----GGHAAFVDAGKLLP-HI-----------PADQFPAHALACELYKVAGIRAVEIGS--------LLLGRD 400 (467)
T ss_pred CcEEe-c----CccEEEEehhhhCC-CC-----------ChhhCcHHHHHHHHHHHcCcceEeecc--------eecccC
Confidence 65543 2 1233333 111 10 00113456777777777788532 122 122222
Q ss_pred hhHHHHHHHHHhhCCCCCC--CcEEEEecC-CCCCHHHHHHHHHHHHHHHHhcccccCCCcccccCCceee
Q 038499 476 EAQSYQIRSAIQKGYVGVK--PGWTRISFP-YYMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKTGTWCF 543 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~--~g~iRls~~-~~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~~~~w~~ 543 (609)
+...+ -.. -..+|+.++ ---|.+.+|++.++|..+.++....- -|.|-+..-.-||
T Consensus 401 ~~~~~-----------~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i~-g~~~~~ep~~lrh 459 (467)
T TIGR02617 401 PKTGK-----------QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPNIK-GLTFTYEPKVLRH 459 (467)
T ss_pred CCCCc-----------cCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhhcC-CeEEEecCchhee
Confidence 11111 011 268999985 22388999999999999998765433 5555544433333
No 377
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.18 E-value=5e-09 Score=106.40 Aligned_cols=339 Identities=17% Similarity=0.208 Sum_probs=191.4
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
.-|||..+. |-+.+.|.+++.+++.++|..+.. .++.-..++.+.+.+.+-.+-. .+.|+++|+.|
T Consensus 50 ~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~-------~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGsEA 121 (442)
T KOG1404|consen 50 RRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSG-------YLNPPIHDLAEALVSKLPGDLK-VVFFVNSGSEA 121 (442)
T ss_pred ceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeecc-------ccCCcHHHHHHHHHHhCCCCce-EEEEecCCchH
Confidence 348887754 567789999999999777643322 1234456677778888777665 78999889887
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HH--------HHHc------CceEEEEecCCCC--
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LS--------WRQS------LAEVVEIGLDDDG-- 214 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~--------~~~~------G~~vv~v~~~~~g-- 214 (609)
+=..+..+.-. .+.-| |+.-...||.+. .. |++. |..-...|....+
T Consensus 122 Nelal~mar~Y-------------t~~~d---iIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~ 185 (442)
T KOG1404|consen 122 NELALKMARLY-------------TGNLD---IIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIF 185 (442)
T ss_pred HHHHHHHHHHh-------------cCCce---EEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccC
Confidence 43333332210 12223 555555555443 22 3321 1100001100011
Q ss_pred --C-------CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccC
Q 038499 215 --L-------LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDV 281 (609)
Q Consensus 215 --~-------ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~ 281 (609)
. --.++|++.+.... ...+..++...++..-|++.+ +++..++|+++|.++|.|+++++-..--.|
T Consensus 186 ~~~~~~e~~d~~a~~l~d~i~~~~-~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~ 264 (442)
T KOG1404|consen 186 GGSNEEEASDRYAKELEDLILYDG-PETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHM 264 (442)
T ss_pred CCCchhhhHHHHHHHHHHHHHhcC-CCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccccc
Confidence 0 01133444443211 123446677888888899866 789999999999999999998753222244
Q ss_pred CCCCCCC--ccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChh
Q 038499 282 RSGQTDG--YDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQ 358 (609)
Q Consensus 282 ~~~~~~~--~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~ 358 (609)
-.++..+ .|++ +..|.+|....+|.+++.+++.. .+..... .... .|.|-
T Consensus 265 wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~EIa~--v~~~~~~-----------------------~fnTyggnP~ 317 (442)
T KOG1404|consen 265 WGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTPEIAD--VLNQKSS-----------------------HFNTYGGNPV 317 (442)
T ss_pred ccccccCCCccHH--HHHhhccCCCcceeeecCHHHHH--HHHhccc-----------------------cccccCCCch
Confidence 3332223 2544 45699987777899999998832 2211000 0011 23333
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEE-EEeccCCCCCcCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILS-FNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~-f~~~~~~~~~~~~~~~~~~~ 436 (609)
..+...+.+.. +-.+.++++..+...++.+.|.++. ...++++.. ..+.+. ..+.. .. ..
T Consensus 318 a~avg~aVL~V-----ikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVR--G~GLm~GvE~V~-dk----------~~ 379 (442)
T KOG1404|consen 318 ACAVGLAVLKV-----IKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVR--GRGLMLGVELVS-DK----------SE 379 (442)
T ss_pred hHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecc--cceeEEEEEEec-cc----------CC
Confidence 33332333333 3357888888999999999887652 344555531 122222 22222 10 01
Q ss_pred CCC---CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 437 DKP---LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 437 ~~~---l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
..+ -....+.+.+.+ .|+.+.-|. +....+||+.++..|++|+++
T Consensus 380 ~~pp~~~~~~~i~~~cke-~Gvlvg~g~-------------------------------i~G~vfriaPPlciT~edi~f 427 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKE-LGVLVGKGG-------------------------------IHGNVFRIAPPLCITKEDIDF 427 (442)
T ss_pred CCCcchHHHHHHHHHHHH-hCeeeeccc-------------------------------ccceEEEecCCeeccHHHHHH
Confidence 111 123456666655 588874331 123689999999999999988
Q ss_pred HHHHH
Q 038499 514 TLEAL 518 (609)
Q Consensus 514 ll~al 518 (609)
+++..
T Consensus 428 ~~~~~ 432 (442)
T KOG1404|consen 428 AVEYF 432 (442)
T ss_pred HHHHH
Confidence 88865
No 378
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.18 E-value=8.6e-09 Score=117.88 Aligned_cols=305 Identities=15% Similarity=0.082 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
.+.+.-+..-+....++++.|.+-.+.-++- ++|++-..+..+.. .....+..|+|+...||..
T Consensus 118 isQG~Lqal~e~Qtmi~~LtGm~vaNASl~D--~atA~aEA~~ma~~--------------~~~~k~~~~~v~~~~hP~~ 181 (954)
T PRK12566 118 IAQGRLEALLNFQQMTIDLTGLDLANASLLD--EATAAAEAMALAKR--------------VAKSKSNRFFVDEHCHPQT 181 (954)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhcc--chhHHHHHHHHHHH--------------HhhcCCCEEEECCCCCHHH
Confidence 3556677888899999999998744333443 44443332222221 1121233799999999987
Q ss_pred HHHHH----HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWR----QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~----~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
....+ ..|++++. +++++.+. +++..+++.+| |..|.+.|+++|++++|++|++++ ++
T Consensus 182 ~~v~~t~~~~~g~~i~~-----------~~~~~~~~-----~~~~~v~vq~P-~~~G~i~d~~~i~~~~h~~gal~~-~~ 243 (954)
T PRK12566 182 LSVLRTRAEGFGFELVV-----------DAVDNLAA-----HAVFGALLQYP-DTHGEIRDLRPLIDQLHGQQALAC-VA 243 (954)
T ss_pred HHHHHHhhhcCCcEEEE-----------cchhhcCC-----CCEEEEEEECC-CCceEEccHHHHHHHHHHcCCEEE-EE
Confidence 76554 35777774 33444444 35666677766 577999999999999999999865 44
Q ss_pred cc--cCCcccccCCCCCCCCccEEEEcCC-----CCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 271 AA--SGPYVEIDVRSGQTDGYDAIFLSTH-----KFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 271 A~--~~~~~~id~~~~~~~~~D~v~~S~h-----K~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+. +.+.. ++-...|+|+++.+.+ =.+|||. .|++.+++++ .++++ -..-|-+++-..........
T Consensus 244 ~d~laL~ll----~~Pge~GADI~vG~~Q~fGvp~~~GGP~-ag~~a~~~~~--~R~~P-GRivG~s~D~~G~~a~~l~L 315 (954)
T PRK12566 244 ADLLSLLVL----TPPGELGADVVLGSTQRFGVPMGYGGPH-AAYFACRDDY--KRAMP-GRIIGVSRDARGNTALRMAL 315 (954)
T ss_pred eCHHHHhCC----CChhhcCCcEEeeCCCcCCCCCCCCCCC-eeeeeehHHH--HhhCC-CCccceeecCCCCeeeehhh
Confidence 31 11111 1111238999987655 3457776 6999999988 44553 33323222211100111122
Q ss_pred ccccccccccCCChhHHHH-----HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEE-E
Q 038499 344 YLEDIEERESGGTPQVIQM-----IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILS-F 417 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~-----~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~-f 417 (609)
+......|.+-.|.||... +.+++-.......|+..|.++...++.++.+.|.+ .|+++... ++|- |
T Consensus 316 qtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~------~fF~~~ 388 (954)
T PRK12566 316 QTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNR------HFFDTL 388 (954)
T ss_pred hHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccC------CccceE
Confidence 2222334555667776432 12222222224467888899999999999999988 68887643 3332 2
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
.+.- + -....+.+...+ .||.+|-- ..+.
T Consensus 389 ~v~~-~----------------~~~~~~~~~a~~-~~~n~r~~---------------------------------~~~~ 417 (954)
T PRK12566 389 TLEV-G----------------GAQAAIIESAEA-ARINLRIL---------------------------------GRGR 417 (954)
T ss_pred EEEc-c----------------CCHHHHHHHHHH-CCCeeEEe---------------------------------CCCe
Confidence 2221 1 024556665544 58887711 1467
Q ss_pred EEEecCCCCCHHHHHHHHHHHH
Q 038499 498 TRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~ 519 (609)
+.||+.-.+|.+|++.++.++.
T Consensus 418 ~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 418 LGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEEEeCCCCCHHHHHHHHHHhc
Confidence 9999999999999999999884
No 379
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.18 E-value=5.6e-09 Score=105.89 Aligned_cols=167 Identities=17% Similarity=0.147 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhCCCCCCcEE---EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-
Q 038499 122 MVHEASNYIKKCLGGGQEDAMI---FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS- 197 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vi---ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~- 197 (609)
-++.+.+..|+.+|++.. ++ |+ |||.+ |...+..+ |+|||+ .+.++-..|-.....
T Consensus 55 GRd~le~iyA~vfgaE~A--LVRpq~v-SGTHA-i~~~Lfg~---------------LrpGD~-ll~~tG~PYDTL~~VI 114 (403)
T PF06838_consen 55 GRDKLERIYADVFGAEDA--LVRPQFV-SGTHA-IALALFGV---------------LRPGDE-LLSITGKPYDTLEEVI 114 (403)
T ss_dssp HHHHHHHHHHHHCT-SEE--EEETTS--SHHHH-HHHHHHHH-----------------TT-E-EEESSSS--CCHHHHH
T ss_pred cHHHHHHHHHHHhCchhh--hhccccc-chHHH-HHHHHHhc---------------CCCCCe-EEEcCCCchhhHHHHh
Confidence 466778888999999743 43 55 78774 55554443 689995 232333333333322
Q ss_pred ---------HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccC----ccccccCHHHHHHHHHHh--
Q 038499 198 ---------WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSN----VTGIYSDTRSIARLLHQY-- 262 (609)
Q Consensus 198 ---------~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn----~TG~~~dl~~I~~la~~~-- 262 (609)
++..|++...|++.++|.+|.+.++++++ +++|++.+.-.-. ++=.+.+++++++++|+.
T Consensus 115 G~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-----~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p 189 (403)
T PF06838_consen 115 GIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-----PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP 189 (403)
T ss_dssp TSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-----TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T
T ss_pred CCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-----cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 34578999999999999999999999999 6899998753221 111224466677777765
Q ss_pred CCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC--CCcEEEEEechhh
Q 038499 263 GGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP--GSPGILLMTKALY 316 (609)
Q Consensus 263 g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp--~g~G~L~~~~~~~ 316 (609)
+++++||.+++-......-... |+|++..|.-|..||. .+-|+++.+++++
T Consensus 190 ~~iifVDNCYGEFvE~~EP~~v---GADl~aGSLIKNpGGgiAptGGYIaGr~~lV 242 (403)
T PF06838_consen 190 DVIIFVDNCYGEFVETQEPTEV---GADLMAGSLIKNPGGGIAPTGGYIAGRKDLV 242 (403)
T ss_dssp TSEEEEE-TTTTTTSSS-GGGG---T-SEEEEETTSGGGTTT-SS-EEEEESHHHH
T ss_pred CeEEEEeCCcceeccccCcccc---chhheeccceeCCCCCccCcCCEEechHHHH
Confidence 7999999998754333222222 8999999999999875 2359999999984
No 380
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.18 E-value=2.7e-11 Score=124.01 Aligned_cols=195 Identities=19% Similarity=0.173 Sum_probs=41.4
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
+.++.+.+++.+... -|.|..-. -..|..-. .+..+.+.++++.|+... +++ |+..+|+..++..+.
T Consensus 17 ~l~~~a~~a~~~~a~-~Y~nLE~d-l~~G~Rg~-R~~~v~~ll~~ltgAeaA---~Vv-NnnaAAv~L~l~~la------ 83 (367)
T PF03841_consen 17 PLSEEAIEAVAEVAS-GYSNLEYD-LETGKRGS-RYAHVEELLCELTGAEAA---LVV-NNNAAAVLLALNTLA------ 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccc-cccccccc-cccccccc-cccccccccccccccccc---ccc-ccccccccccccccc------
Confidence 445667777655443 23333211 11222222 245677888999999743 455 344456666655553
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchH------HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEec
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNL------LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSA 241 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~------~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~ 241 (609)
+|. +|+++.-+-.-+- ..++..|+++++|.... ...+++++++|+ ++|.++.-.|
T Consensus 84 ----------~~~--EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t~~~Dye~AI~-----e~Ta~ll~Vh 144 (367)
T PF03841_consen 84 ----------KGK--EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RTHLSDYEKAIT-----ENTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------ccc--cccccccccccccccccccccccccccccccccccc--cccccccccccc-----cccccccccc
Confidence 343 5777665444332 23456899999998643 446889999999 6899888888
Q ss_pred ccCc--cccc--cCHHHHHHHHHHhCCeEEEecccc---------CCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 242 CSNV--TGIY--SDTRSIARLLHQYGGFACFDFAAS---------GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 242 ~sn~--TG~~--~dl~~I~~la~~~g~~vivD~A~~---------~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
.||. .|.. .+++++++++|+||+++++|.+.+ .+. ..++...-..|+|+++||+.|.+|||. .|+
T Consensus 145 ~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGi 222 (367)
T PF03841_consen 145 TSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLAAGADLVTFSGDKLLGGPQ-AGI 222 (367)
T ss_dssp ----------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTSSSSS-S--EE
T ss_pred ccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhhcCCCEEEEECCCcCCCCC-eEE
Confidence 8886 3444 579999999999999999998862 222 223333334589999999999999999 599
Q ss_pred EEEechhh
Q 038499 309 LLMTKALY 316 (609)
Q Consensus 309 L~~~~~~~ 316 (609)
++.+++++
T Consensus 223 I~Gkk~lI 230 (367)
T PF03841_consen 223 IVGKKELI 230 (367)
T ss_dssp EEEEHHHH
T ss_pred EEeCHHHH
Confidence 99999993
No 381
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.14 E-value=9.2e-08 Score=110.12 Aligned_cols=232 Identities=14% Similarity=0.046 Sum_probs=129.2
Q ss_pred HHHHHHHhhh---ccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccCCCCC--CCC
Q 038499 219 EALRSKLELY---KDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ--TDG 288 (609)
Q Consensus 219 e~L~~al~~~---~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~--~~~ 288 (609)
+.+++.|.+. ...+++..+++.-+ +...|++.+ +++|.++|++||+++|+|+++.+...--.+-..+ .-.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~ 646 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK 646 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence 4566666531 11235667777764 677788866 6789999999999999999976432211111100 013
Q ss_pred ccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHH
Q 038499 289 YDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAAL 367 (609)
Q Consensus 289 ~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal 367 (609)
.|+++++ |.++|. ..+|.++++++++ +.+...... +. ++ ...-..|.|--.+...+.+
T Consensus 647 PDIi~~g--KgLtgG~~Plaa~l~~~~I~--~~f~~~~~~-~~-------------~~---hg~Ty~gnpl~cAaala~L 705 (817)
T PLN02974 647 PDIACYA--KLLTGGLVPLAATLATEEVF--EAFRGPSKL-DA-------------LL---HGHSYTAHPMGCAAAAKAL 705 (817)
T ss_pred CCEEeec--ccccCCCCccEEEEEcHHHH--Hhhcccccc-CC-------------cc---cCCCCCcCHHHHHHHHHHH
Confidence 5988887 999876 3689999999984 333110000 00 00 0000123344444445555
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHh----CCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC--C
Q 038499 368 AFWVKEYIGHEVIKKQEETYIERALERL----LPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP--L 440 (609)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~~~~~L----~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~--l 440 (609)
++.. +..-.+.+.++..++.+++.+.| +++|.+. +.+ ..-++.+.+.. +. ....+ .
T Consensus 706 ~~~~-~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg-----~Gl~~~iel~~-~~----------~~~~~~~~ 768 (817)
T PLN02974 706 QWYK-DPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVS-----LGTVLALELDA-EG----------SGSGYSSL 768 (817)
T ss_pred HHHH-cccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEe-----eeeEEEEEEec-CC----------cccccchH
Confidence 5542 11122345555555555544444 4455432 222 22334444433 11 00011 0
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
-...+.+.+...+||.+++. .+.+|+..++.++++|+++++++|.+
T Consensus 769 ~a~~v~~~~~~~~Gl~~r~~----------------------------------Gnvi~l~pP~~i~~e~l~~~~~~l~~ 814 (817)
T PLN02974 769 YARSVVRRLRREDGIYARPL----------------------------------GNVVYLMCGPTTSPETCTRLLRKVYR 814 (817)
T ss_pred HHHHHHHHHHHhCCEEEEec----------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 13456777762469998831 26789999999999999999999987
Q ss_pred HH
Q 038499 521 IA 522 (609)
Q Consensus 521 v~ 522 (609)
.+
T Consensus 815 ~~ 816 (817)
T PLN02974 815 RL 816 (817)
T ss_pred Hh
Confidence 54
No 382
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.5e-08 Score=102.89 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH
Q 038499 118 HTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 118 ~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (609)
++.+..-.+++.|++++|++. .|++. .|-+ ++...+.++. +.|| +|++....+..+...
T Consensus 136 Gt~DvHldlE~~iakF~G~E~--aivYs-~gF~-ti~S~ipafs---------------KrGD--Ii~~de~~nfaIq~G 194 (467)
T KOG1358|consen 136 GTIDVHLDLEKRIAKFMGTED--AIVYS-YGFS-TIESAIPAFS---------------KRGD--IIFVDEAVNFAIQKG 194 (467)
T ss_pred ccceeecccHHHHHHhhCCcc--eeeec-cccc-hhhhcchhhh---------------ccCc--EEEEehhhhHHHHHH
Confidence 355666778999999999984 57775 5544 4555555554 6788 899988888888777
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhc----cCC---Cc-eEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYK----DAK---RP-ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~----~~~---~~-~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
++.+.-.+++...+ |+++|++.+.+.. ..+ .| +.+++....-+||.+.|+.+|.++..||...+++|
T Consensus 195 lqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~Rvild 269 (467)
T KOG1358|consen 195 LQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILD 269 (467)
T ss_pred HhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEe
Confidence 77777788888765 7888877765321 111 22 37788889999999999999999999999999999
Q ss_pred ccccCCcccc---cCC---CCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 270 FAASGPYVEI---DVR---SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 270 ~A~~~~~~~i---d~~---~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+..+.|...- .+. ......+|++++|..-.+++.+ |+...+.-....+++ .|.++
T Consensus 270 Es~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G--gFc~G~~~i~~hQrL----Sg~~Y------------- 330 (467)
T KOG1358|consen 270 ESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG--GFCAGKSFIADHQRL----SGSGY------------- 330 (467)
T ss_pred cccccccccccCccccccCCCCccceeeeeecccccccccC--ceeecceeeEeeeec----cccce-------------
Confidence 9977654321 000 0112467999999887776332 555553333111111 12222
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
-+.+..|+.+... +..+..+.+. ...+.+..+.....+.+.|+...++.+.+. +-+|++-....+ .
T Consensus 331 -------~fSAslPp~la~a-a~~ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~---~~SPi~hl~l~~-~ 396 (467)
T KOG1358|consen 331 -------CFSASLPPYLAGA-AIKAILIEEW--NPEIVQPLRAKVAKFHAALSSNSGFIVSGS---PESPIIHLQLER-S 396 (467)
T ss_pred -------eeeccCchhhhhh-HHHHHHHHhh--CcchhhhhhccccccchhhhcCCceEEecC---cCCceeeeeecc-c
Confidence 1223455544321 1122222121 122555566666677788888878888876 456777666655 2
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC-CCcEEEEec
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV-KPGWTRISF 502 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~-~~g~iRls~ 502 (609)
..+. ..+..+ -+.++...... |+.+.. ...+.+ .+-. -+-.+||++
T Consensus 397 ~~s~-------e~e~~l-L~eivd~~i~~-~~ll~~--------a~~~~~----------------~e~~~~~pSiri~~ 443 (467)
T KOG1358|consen 397 YGSR-------EKEEKL-LEEIVDKCIAE-GVLLTR--------AKYLEK----------------LERCPIPPSIRICV 443 (467)
T ss_pred ccch-------HHHHHH-HHHHHHHHHhh-cceehh--------hhhhhh----------------cccCCCCCcEEEEE
Confidence 1000 000000 11222222222 444431 111111 1111 245799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 038499 503 PYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 503 ~~~~t~eeid~ll~al~~v~~~ 524 (609)
...++++|++++.+.|++++..
T Consensus 444 ~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 444 SAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred eCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 383
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=1.2e-07 Score=97.19 Aligned_cols=290 Identities=20% Similarity=0.168 Sum_probs=163.8
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|++....+|.|+. |+|++++ |...+.+.+++.+.+.++- |+ ..+.-+.+ .-++.+.+.+.++-.
T Consensus 45 gkg~kl~D~~g~E---yiD~~ssw~~~~~Ghanpev~ral~~q~~k~~---hs---~~~~~t~e-av~l~~~l~~~~~~~ 114 (433)
T KOG1401|consen 45 GKGSKLFDPDGKE---YIDFTSSWAVTILGHANPEVARALAEQAKKLG---HS---SNGYFTLE-AVELEEVLSAVLGKG 114 (433)
T ss_pred ceeeeeecCCcce---eeeeccceeccccCCCCHHHHHHHHHHHhhhe---ec---cCccccHH-HHHHHHHHHhcccCC
Confidence 3334444577654 8888766 5667889999988887641 21 11222223 556777777777655
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcCceEEEEecC---CC
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSLAEVVEIGLD---DD 213 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G~~vv~v~~~---~~ 213 (609)
..+.|.||.|||+|+..++-.++-...- =.+.++..|+.-...||. ...++...+..-...+.+ ++
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~----------~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~ 184 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGK----------KHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPD 184 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcc----------cCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCc
Confidence 4459999999999855554433310000 011222124544444444 333332222111111111 00
Q ss_pred ----CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-CcccccC-CC
Q 038499 214 ----GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEIDV-RS 283 (609)
Q Consensus 214 ----g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~id~-~~ 283 (609)
.--|+.+|++.++.++ +.+..|++...+...|++.. +..|..+|+++|+++|.|+.+.+ +-...-. .+
T Consensus 185 v~~~~ynd~t~l~k~~~~h~--~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e 262 (433)
T KOG1401|consen 185 VVTAEYNDSTALEKLFESHK--GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQE 262 (433)
T ss_pred eeecccCCHHHHHHHHHhCC--CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHH
Confidence 0127899999998642 45678899988888888744 56788999999999999999775 2111100 00
Q ss_pred CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH
Q 038499 284 GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI 363 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~ 363 (609)
.-..-.|+.++. |.+||...+|+.++++++ .+.+.|-.+ .| ...-..|.|-.....
T Consensus 263 ~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV--~~~i~~~~~----------------l~----hg~Tf~gnpLacsa~ 318 (433)
T KOG1401|consen 263 YFGVTPDITTVA--KPLGGGLPIGATGVRDKV--AEMISPGDH----------------LY----HGGTFSGNPLACSAG 318 (433)
T ss_pred HhCcCCcceeeh--hhccCCceeEEEeehHHH--HhhcCCCCc----------------cc----cCcccCCChhhhhHH
Confidence 000134776665 999887779999999998 444433211 00 000112333333322
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 364 RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
..++..+ ++....+++....+.+++.+.+.+.+.++
T Consensus 319 ~~~l~~l-~~~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 319 IKVLDEL-KDPETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred HHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 3333322 23334566777777788888888876544
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.02 E-value=2e-09 Score=111.35 Aligned_cols=175 Identities=17% Similarity=0.103 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
++...+..-+-+..|...-...+.+ ..+|. +.+.+..+.+ | .+|..+ .|+.+...|.+-..+...
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~v-P~atg-m~l~l~l~~l------~------~r~~a~-~Viw~ridqkSc~kai~~ 120 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVV-PMATG-MSLTLCLLAL------R------MRPKAK-YVIWPRIDQKSCFKAIER 120 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEE-SS-HH-HHHHHHHHHH------H------HHCT---EEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccceEEE-ecccc-cHHHHHHHHH------h------cccCCc-eEEEeeccccchHHHHHh
Confidence 3334444444556787744345555 45553 3333333321 1 123333 799999999999999999
Q ss_pred cCceEEEEecCC--C-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC-HHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 SLAEVVEIGLDD--D-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ~G~~vv~v~~~~--~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d-l~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.|.+++.|+... + -..|++++++++++.. ..+.+.++++.+-.-|...| +++|+++|++||+..++..|++.-.
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G--~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~ 198 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELG--ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQS 198 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHC--GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhC--CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhH
Confidence 999999998532 2 2567889999987531 34578899999999999988 9999999999999999999998721
Q ss_pred ccccCCCC----CCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 277 VEIDVRSG----QTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 277 ~~id~~~~----~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
..+ ++.+ ....+|+++-|.-|-|--|-|-+++....
T Consensus 199 ~~~-~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~ 238 (389)
T PF05889_consen 199 SKC-MHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFD 238 (389)
T ss_dssp HHH-HHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESS
T ss_pred HHH-HHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecC
Confidence 110 0000 00134666666666665565544444443
No 385
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.92 E-value=1.5e-07 Score=99.10 Aligned_cols=226 Identities=17% Similarity=0.139 Sum_probs=128.9
Q ss_pred CccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 038499 66 NAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE 139 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~ 139 (609)
+.++.+..|+ .|+|..+. |-..+.|.+++.+.+... ...+.. ........++.+.|.+.++...
T Consensus 7 G~~l~d~dG~---~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~-~~~~~~-----~~~~~~~~~la~~L~~~~p~~~- 76 (339)
T PF00202_consen 7 GAYLWDVDGR---EYLDFMSGYGSVNLGHNHPEIAEAIAEQANKL-NYVSFS-----GFTHPEAAELAEKLAELFPGGL- 76 (339)
T ss_dssp BTEEEETTSE---EEEESSHHHHTTTT-BT-HHHHHHHHHHHHHC-SSCSTT-----TSEEHHHHHHHHHHHHHSSTTE-
T ss_pred cCEEEECCCC---EEEECCCCccceecCCCccccchhHHHHhhhc-cccccc-----ceeccchhhhhhhhhhcccccc-
Confidence 3455555553 48998633 455788999998877543 111101 1123446677888888885433
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHc------------CceEE
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQS------------LAEVV 206 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~------------G~~vv 206 (609)
+.+.|+.||+++ +...+++.-. .-.....++.+ .|+.-...||+... ++... ...+.
T Consensus 77 ~~v~f~~sGseA-ve~Alkla~~--------~~~~~~~~~r~-~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 146 (339)
T PF00202_consen 77 DRVFFANSGSEA-VEAALKLARQ--------YHNKRAYTGRR-KILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVV 146 (339)
T ss_dssp EEEEEESSHHHH-HHHHHHHHHH--------HHHHTHHHTTT-EEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEE
T ss_pred ceeeeccCchHH-HHHHHHHhhc--------ccccccccCCc-eEEEeeeeeeccCcccccccCCccccccccccccccc
Confidence 389999888886 3333332100 00000123333 56666666665332 22211 12456
Q ss_pred EEecCCCCC-----CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCc-
Q 038499 207 EIGLDDDGL-----LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPY- 276 (609)
Q Consensus 207 ~v~~~~~g~-----ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~- 276 (609)
.+|.+.... -..+++++.+.+. ..+++..+++..+....|.+.+ +++|.++|++||+++|+|+++.+..
T Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR 225 (339)
T PF00202_consen 147 FVPFPDPAADEEEQACLNALEELIAAL-NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGR 225 (339)
T ss_dssp EEETTCHHHHHHHHHHHHHHHHHHHHH-HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTT
T ss_pred cccCCccchhhhHHHHHHHHHHHHHhh-cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccc
Confidence 677653110 0111233333221 1246778889888888887754 6899999999999999999977532
Q ss_pred cc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 277 VE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 277 ~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
.. .-..... -.+|+++++ |.++|...+|.+++++++
T Consensus 226 tG~~~a~~~~g-v~PDiv~~g--K~l~gG~p~sav~~~~~i 263 (339)
T PF00202_consen 226 TGKFFASEHYG-VDPDIVTFG--KGLGGGLPISAVLGSEEI 263 (339)
T ss_dssp TSSSSGHHHHT-SSSSEEEEE--GGGGTTSSEEEEEEEHHH
T ss_pred cCCccceeccc-ccCcccccc--cchhhhhhcccccccchh
Confidence 11 1001010 145999997 999877778999999998
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.53 E-value=1.8e-05 Score=79.94 Aligned_cols=335 Identities=14% Similarity=0.083 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~ 201 (609)
+..+++.+++.+|.+ .++-+..|-. |=+.+..++- . .+ ...||. +.++.+..|... ..-....
T Consensus 81 ~~~L~~avkdifGfq---~~iPthQGRg-AE~Il~~i~i-k----~~-----~~~pg~--~~~~~sN~~FdTTr~h~~~n 144 (471)
T COG3033 81 YYALADAVKDIFGFQ---YTIPTHQGRG-AENILIPILI-K----KG-----EQEPGS--KMVAFSNYHFDTTRGHIQIN 144 (471)
T ss_pred HHHHHHHHHHhcCce---eeeeccCCcc-HHHHHHHHHh-h----hc-----cccCCc--cccccccceecchhHHHHhc
Confidence 456778889999974 4555544322 2333333321 0 00 124554 334444444443 3344567
Q ss_pred CceEEEEecCC----------CCCCCHHHHHHHHhhhccCCCceEEEEecccCcccccc---CHHHHHHHHHHhCCeEEE
Q 038499 202 LAEVVEIGLDD----------DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS---DTRSIARLLHQYGGFACF 268 (609)
Q Consensus 202 G~~vv~v~~~~----------~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~---dl~~I~~la~~~g~~viv 268 (609)
|+.++-++.++ .|.+|++.|++.|++-...+-|-+++...+|+.-|... .++++.++|++|++.++.
T Consensus 145 g~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~ 224 (471)
T COG3033 145 GATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVM 224 (471)
T ss_pred CCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEe
Confidence 88776665432 36899999999998643333344554445555667654 478899999999999999
Q ss_pred eccccC-----------CcccccCCCCC---CCCccEEEEcCCCCCCCCCCcEEEEEechh----hc-cCCCCCCccCCC
Q 038499 269 DFAASG-----------PYVEIDVRSGQ---TDGYDAIFLSTHKFLGGPGSPGILLMTKAL----YQ-LGSFPPSTCGGG 329 (609)
Q Consensus 269 D~A~~~-----------~~~~id~~~~~---~~~~D~v~~S~hK~lggp~g~G~L~~~~~~----~~-l~~~~p~~~ggg 329 (609)
|.+-.+ +|....+.++. ...+|.++.|.-|=-..+-| |+|.++++. +. ...+.-+..|..
T Consensus 225 Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~V~~eG~~ 303 (471)
T COG3033 225 DAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLVVVQEGFP 303 (471)
T ss_pred ehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHHHhheEeecccc
Confidence 987332 22222222110 13568889999887655565 999999873 21 111111111100
Q ss_pred ceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCC
Q 038499 330 TVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTST 409 (609)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~ 409 (609)
..|. +.+---.+++.-+.+....+.++.|. +-.+|+.+.|.+. |+.|+.|.
T Consensus 304 -----------------------tYGg--l~GrdmealAvGL~e~~~~~yl~~Rv-~Qv~YL~~~l~~~-GVpi~~pa-- 354 (471)
T COG3033 304 -----------------------TYGG--LAGRDMEALAVGLREGVNFDYLAHRV-AQVQYLADGLEEA-GVPIVQPA-- 354 (471)
T ss_pred -----------------------ccCc--ccchhHHHHHHHHHHhcCcHHHHHHH-HHHHHHHHHHHhc-CCeeEecC--
Confidence 0011 00000122222233444555555444 4467888899886 78777663
Q ss_pred CCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 410 KRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 410 ~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
.++-.|.-.. ..-. +. ..+ ...++.++-.|....||.+..-..+ .++-++..-.+
T Consensus 355 --GGHavfvda~-~~lp----hi--p~e-qFpaqala~ely~e~GiRavElG~~-------~~~rd~ktg~q-------- 409 (471)
T COG3033 355 --GGHAVFVDAG-KFLP----HI--PAE-QFPAQALACELYKEAGIRAVELGSF-------SLGRDPKTGKQ-------- 409 (471)
T ss_pred --CCceEEeehh-hhcC----CC--Chh-hCcHHHHHHHHHHHhCeeeeeeece-------ecccCCCcccc--------
Confidence 2333333211 0000 00 001 1345667777777889976532111 12211100000
Q ss_pred CCCCCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHhccccc
Q 038499 490 YVGVKPGWTRISFP-YYMSNEEFEFTLEALEFIAIYGQRFL 529 (609)
Q Consensus 490 ~~~~~~g~iRls~~-~~~t~eeid~ll~al~~v~~~~~~~~ 529 (609)
.-..-..+|+.++ -.-|.+.+|+++++++.+.+++...-
T Consensus 410 -~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~~ik 449 (471)
T COG3033 410 -HPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAEDIK 449 (471)
T ss_pred -CCCchheeeEeccccccchhHHHHHHHHHHHHHhccccCC
Confidence 0001267999985 23378999999999999999886433
No 387
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.40 E-value=1e-05 Score=82.10 Aligned_cols=159 Identities=14% Similarity=0.120 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhC-CCCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 124 HEASNYIKKCLG-GGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 124 ~e~r~~ia~~~g-~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
++....|-+.+| +..++ .|+| |+|+|..+++++-+|.-.. -.++....|+...+.|+++...-...
T Consensus 49 ~~~Ir~LH~~VGNAvt~gr~IV~-GtGsTQL~~AalyALSp~~-----------~~~~~p~~VVa~aPYY~~Y~~qt~~f 116 (363)
T PF04864_consen 49 ERQIRRLHRVVGNAVTDGRYIVF-GTGSTQLFNAALYALSPNA-----------SPSSSPASVVAAAPYYSSYPEQTDFF 116 (363)
T ss_dssp HHHHHHHHHHH-SB--TTSEEEE-ECHHHHHHHHHHHHHCHHT------------TTSSSEEEEE-SS--CHHHHHCCCT
T ss_pred HHHHHHHHHHhccccccCcEEEE-cCCHHHHHHHHHHhcCCCC-----------CCCCCCceeEecCCCccchHHHHHhc
Confidence 334444555555 33333 5666 5999999999988885210 01222234666666666554332211
Q ss_pred -CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc-ccc
Q 038499 202 -LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY-VEI 279 (609)
Q Consensus 202 -G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~-~~i 279 (609)
.....+-.-..... .. ..+.+-|=+++.||||.|.+-. .+ ++.-+..+|.|-|+..|+ .+|
T Consensus 117 ~s~~y~w~Gda~~~~----------~~--~~~~~~IElVTSPNNPDG~lr~--~V---~~g~~~k~I~D~AYYWPhyTpI 179 (363)
T PF04864_consen 117 DSRLYKWAGDASNFK----------NS--DNPSPYIELVTSPNNPDGQLRE--AV---LNGSSGKVIHDLAYYWPHYTPI 179 (363)
T ss_dssp -BTTEEEEEECCCGT----------T---S-CCGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-STTTS--
T ss_pred cccCccccccHHhhc----------cC--CCCCCeEEEEeCCCCCcccccc--hh---cCCCCcceeeeeeeeccccccc
Confidence 11222222111110 10 0134567789999999998732 22 344567789999998885 455
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhh
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALY 316 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~ 316 (609)
.-.. +-|++.|+.+|.-| -.| +|+.+++++.+
T Consensus 180 ~~~a----D~DiMLFT~SK~TG-HAGSR~GWAlVKD~~V 213 (363)
T PF04864_consen 180 TAPA----DHDIMLFTLSKLTG-HAGSRFGWALVKDEEV 213 (363)
T ss_dssp -S-B------SEEEEEHHHHCS--GGG-EEEEEES-HHH
T ss_pred CCCC----CCceEEEEEecccC-ccccccceeeecCHHH
Confidence 4322 56999999999976 433 99999998773
No 388
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=98.36 E-value=5.2e-07 Score=96.97 Aligned_cols=385 Identities=16% Similarity=0.051 Sum_probs=220.9
Q ss_pred EecCCCCCCChHHHHHHHHHhhc-CCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVL-PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~-~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~ 157 (609)
|+|++..+.....-++......+ ....|||+. ...+..+.+...+.|-.+..+++....| +++|+ . +++|+..++
T Consensus 23 yldhag~tl~sesq~~g~~~~sq~~e~~nphs~-~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp-~-~t~al~~va 99 (728)
T KOG2142|consen 23 YLDHAGRTLFSESQLEGVAFQSQSSENANPHSH-LGTSRSLARLVAQVRLRILALFNTTAFDYEVSLP-A-LTEALKLVA 99 (728)
T ss_pred HHHhhhhhhhhhcccchhhhhhhccccCCCccc-ccchHHHHHHHHHHHHHHHHHhccccccccchhH-H-HHHHHHHHH
Confidence 88888777665554444332222 234677774 4566677788888888888888865443 88998 5 899999999
Q ss_pred HHhcccchhhHHHHHHhhhcCCCc-eEEEECCCCccchHH-HH--HHcCceEEEE-ecCC---CCCCCHHHHHHHHhhhc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEER-WVVFVGPHEHHSNLL-SW--RQSLAEVVEI-GLDD---DGLLDIEALRSKLELYK 229 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~-~~Vlv~~~~h~s~~~-~~--~~~G~~vv~v-~~~~---~g~ld~e~L~~al~~~~ 229 (609)
.++... ..+.+ ..+=...+.|-+... -. ...|..+..+ ..+. .....+.....-+
T Consensus 100 e~fp~~-------------s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l---- 162 (728)
T KOG2142|consen 100 EAFPFY-------------SQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL---- 162 (728)
T ss_pred HhCccc-------------cccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCc----
Confidence 987521 22221 012222233333321 11 1233333333 2111 1111221111111
Q ss_pred cCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 230 DAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
....+....+-.|..|..+....+-.+.-..+-++++|.|..+...+++.... ..|++.. +.|.||-|. |.|
T Consensus 163 --s~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy---~f~~~~~-lltiFgyet--gAv 234 (728)
T KOG2142|consen 163 --SEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESY---PFDFNPK-LLTIFGYET--GAV 234 (728)
T ss_pred --ccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccccccchHhhC---CCcccch-heeecCCCc--hhh
Confidence 13447777778888887543333333332446789999998877788887765 5688888 999999777 444
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY--IGHEVIKKQEETY 387 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~--~g~~~i~~~~~~l 387 (609)
.+..+.. .. .||++..+...|.. ...--.+...|++.|+......++.-..|-..+. .++..+..+...+
T Consensus 235 lv~~r~A---~~----~Ggkt~sa~f~wp~-~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al 306 (728)
T KOG2142|consen 235 LVMNRSA---EL----KGGKTASAEFSWPM-LYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLAL 306 (728)
T ss_pred HHHhhhh---Hh----hcCccceeecccch-HHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHH
Confidence 4444431 11 17787766544321 1111235678888898766554433333333233 3567777777777
Q ss_pred HHHHHHHhCCC----CceEEeCCC---CCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC
Q 038499 388 IERALERLLPN----QNIKILGNT---STKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG 460 (609)
Q Consensus 388 ~~~~~~~L~~~----p~i~v~~~~---~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G 460 (609)
.+++.-.|.+. |.+++++-. ..-..++|.|++.. +. +.+.-.-+|.+.. .+||+.++|
T Consensus 307 ~~~whvlLda~~lG~kdmd~yglS~f~Pdfqg~sf~fv~g~-d~------------psgfGcl~VkKs~--i~~l~lrtG 371 (728)
T KOG2142|consen 307 ANNWHVLLDALALGPKDMDSYGLSLFQPDFQGPSFYFVFGR-DD------------PSGFGCLEVKKSA--ISGLELRTG 371 (728)
T ss_pred hhhHHHHHhhhccCcchHhhhhhhccCccceeeeEEEEecc-CC------------CCceeeeeeehhh--hhceeccCC
Confidence 77777776653 233333321 13456788888876 31 2223333444444 579999999
Q ss_pred cccCChhhhhhcCCChhHHHHHHHHHhh--CCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 461 CACAGPYGHHLLDLDEAQSYQIRSAIQK--GYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 461 ~~ca~p~~~~ll~i~~~~~~~~~~~~~~--~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
|+|+.......+|+..+.+...-++... .+.|-+ ++ ++..+.++++.++.++..-
T Consensus 372 cfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~-----~s-~~~~~~~~~~a~~~~~v~~ 428 (728)
T KOG2142|consen 372 CFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQP-----VS-GYMQTPADVGAYLSAQVSD 428 (728)
T ss_pred CCCCCcceeecccccHHHHHHHhhhccccccCCCCc-----cc-ccccchhhhhHHHHHhhhh
Confidence 9999655566677776554433222111 123321 67 8888999999999887553
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.32 E-value=8.3e-06 Score=80.43 Aligned_cols=168 Identities=17% Similarity=0.114 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH------
Q 038499 123 VHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL------ 195 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~------ 195 (609)
++-+.+..|+.+|++..- ..-|. |||.+ |...+-.+ |+|||...-+++. .|-...
T Consensus 67 RdtLe~vyA~vf~aE~a~VRpq~i-sGTHA-I~~aLfg~---------------LRpgDell~i~G~-PYDTLeevIG~r 128 (416)
T COG4100 67 RDTLERVYAQVFGAEAALVRPQII-SGTHA-IACALFGI---------------LRPGDELLYITGS-PYDTLEEVIGLR 128 (416)
T ss_pred hhHHHHHHHHHhccccceeeeeee-cchhH-HHHHHHhc---------------cCCCCeEEEecCC-cchhHHHHhccC
Confidence 445667779999987551 23466 78774 54443322 6899963333332 222221
Q ss_pred ----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecc----cCccccccCHHHHHHHHHHh--CCe
Q 038499 196 ----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSAC----SNVTGIYSDTRSIARLLHQY--GGF 265 (609)
Q Consensus 196 ----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~----sn~TG~~~dl~~I~~la~~~--g~~ 265 (609)
.+++..|+....+++..+|.+|.+.+..+++ ++||++.+.-. .-|+=.+.+++++..+.|+. +++
T Consensus 129 g~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~-----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~i 203 (416)
T COG4100 129 GEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS-----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVI 203 (416)
T ss_pred CCCcccHHHhCcceeecccccCCcccHHHHHHhcC-----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEE
Confidence 2345678889999999999999999999999 79999877432 12333345677777888875 799
Q ss_pred EEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC--CCcEEEEEechhh
Q 038499 266 ACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP--GSPGILLMTKALY 316 (609)
Q Consensus 266 vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp--~g~G~L~~~~~~~ 316 (609)
++||.+++-.......... |+|++..|.-|.-||. ..-|++..+.+++
T Consensus 204 vFVDNCYGEFvE~~EPt~v---GaDliAGSLIKNpGGgiaktGGYiaGk~~~v 253 (416)
T COG4100 204 VFVDNCYGEFVEEKEPTHV---GADLIAGSLIKNPGGGIAKTGGYIAGKAELV 253 (416)
T ss_pred EEEeccchhhhhccCcccc---chhhhccceeeCCCCceeeccceeechHHHH
Confidence 9999997754433333332 8899999999998875 2358999999884
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0059 Score=61.08 Aligned_cols=252 Identities=17% Similarity=0.169 Sum_probs=147.3
Q ss_pred EEEECCCCccchHHHHHHcCc-eEEEEecC--CCCCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccC---HHHH
Q 038499 183 VVFVGPHEHHSNLLSWRQSLA-EVVEIGLD--DDGLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD---TRSI 255 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~-~vv~v~~~--~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d---l~~I 255 (609)
.|.++.+++......|...|. ++...+.= +.-.+|++-+...|+.. +.-.++.+.+| +||||+=.. ...|
T Consensus 127 ~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A---Pe~si~iLhaCAhNPTGmDPT~EQW~qi 203 (410)
T KOG1412|consen 127 TVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA---PEGSIIILHACAHNPTGMDPTREQWKQI 203 (410)
T ss_pred eeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC---CCCcEEeeeccccCCCCCCCCHHHHHHH
Confidence 699999999999999999994 55555542 24468999988888742 33447777777 899998432 3458
Q ss_pred HHHHHHhCCeEEEeccc-cCCcccccCCCCC-----CCCc-cEEEEcCCCCCCCC-CCcEEEE--EechhhccCCCCCCc
Q 038499 256 ARLLHQYGGFACFDFAA-SGPYVEIDVRSGQ-----TDGY-DAIFLSTHKFLGGP-GSPGILL--MTKALYQLGSFPPST 325 (609)
Q Consensus 256 ~~la~~~g~~vivD~A~-~~~~~~id~~~~~-----~~~~-D~v~~S~hK~lggp-~g~G~L~--~~~~~~~l~~~~p~~ 325 (609)
+++.++.+.+.++|-|+ +...-..+-..+. ..+. =+++-|+.|.+|-- ..+|-|. +++... +..+..
T Consensus 204 a~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~S-- 280 (410)
T KOG1412|consen 204 ADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKS-- 280 (410)
T ss_pred HHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhH-HHHHHH--
Confidence 89999999999999884 3322233322221 1233 35666999998732 1255433 333321 111110
Q ss_pred cCCCceEeecccccccccccccccccccCCCh-hHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 326 CGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQMI-------RAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 326 ~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~~-------~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
.+.- ..|.....| +..+-+ -+--+.|.. .+..+..|+.+++..+++.|..
T Consensus 281 ------------------Ql~l-viR~~~SNPPAyGArIV~kvL~tP~lre~W~~---sik~MssRI~~MR~aLrd~L~a 338 (410)
T KOG1412|consen 281 ------------------QLTL-VIRSNWSNPPAYGARIVHKVLSTPELREQWIQ---SIKTMSSRIKKMRTALRDHLVA 338 (410)
T ss_pred ------------------HHHH-HHhhccCCCcchhhHHHHHHhcCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 112222222 222211 122233432 3567888999999999999877
Q ss_pred C--Cce-EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 398 N--QNI-KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 398 ~--p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
+ ||- .-+ ....+.|+|.- |.+..| +.|.+.+.|.+..
T Consensus 339 L~TPGtWDHI----~~QiGMFSyTG--------------------Ltp~qV-~~li~~h~vyLl~--------------- 378 (410)
T KOG1412|consen 339 LKTPGTWDHI----TQQIGMFSYTG--------------------LTPAQV-DHLIENHKVYLLS--------------- 378 (410)
T ss_pred cCCCCcHHHH----HhhccceeecC--------------------CCHHHH-HHHHHhceEEEec---------------
Confidence 5 221 000 13456666543 344455 4454666776541
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.| |||+.- .+...+|++..+|.+.++..
T Consensus 379 --------------------~G--RInisG-LN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 379 --------------------DG--RINISG-LNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred --------------------CC--cEeeec-cccccHHHHHHHHHHHHHhh
Confidence 24 677643 35577999999999887654
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.68 E-value=0.0028 Score=68.81 Aligned_cols=294 Identities=16% Similarity=0.121 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH--
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ-- 200 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-- 200 (609)
.-.....|+++.|.+-.+.-++- -||.++=.+++. .. ..... .+++....|+.....++.
T Consensus 165 llNyQTmi~dlTGL~~aNASLLD-EgTAaaEAm~l~-~~--------------~~krk--k~vvd~~~hpqtlsV~~TRa 226 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMANASLLD-EGTAAAEAMALC-NR--------------INKRK--KFVVDSNCHPQTLSVVKTRA 226 (1001)
T ss_pred HhhhHHhhhhccCCcccchhhhc-cchhHHHHHHHH-Hh--------------hcccc--eEEecCCCCcchhhhhhccc
Confidence 34467788999998755444443 566553332222 21 12333 599999999998877653
Q ss_pred --cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 201 --SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 201 --~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
.|++++.. |+++...-. ....-+.+..+ +.-|.+.|.+++++.+|+.|.++++-.- - -...
T Consensus 227 ~~~~i~v~~~--------~~~~~~~s~------~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~atD-L-LaLt 289 (1001)
T KOG2040|consen 227 KGFGIKVVVS--------DIKEADYSS------KDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMATD-L-LALT 289 (1001)
T ss_pred cccceeEEec--------CHHHhhccc------cceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEeeh-h-hHHH
Confidence 24443322 222221111 23445555555 4569999999999999999988664221 0 0011
Q ss_pred ccCCCCCCCCccEEEEcCCCC-----CCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc-----cccc
Q 038499 279 IDVRSGQTDGYDAIFLSTHKF-----LGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY-----LEDI 348 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~-----~~~~ 348 (609)
+ +++-...|+|+++.|.+.| +|||. .||+.+++++. +.++-...| -+.+- .....| ....
T Consensus 290 i-LrpPgefGaDIavGSsQRFGVPlGYGGPH-AaFfAv~~~l~--R~mPGRiiG-vtkD~-----~gk~a~RLALQTREQ 359 (1001)
T KOG2040|consen 290 I-LRPPGEFGADIAVGSSQRFGVPLGYGGPH-AAFFAVSESLV--RMMPGRIIG-VTKDA-----LGKEAYRLALQTREQ 359 (1001)
T ss_pred c-cCChhhcCceeeeccccccCccccCCCch-HHHHHHHHHHH--hhCCCceEe-eeecc-----cccHHHHHHHHHHHH
Confidence 1 1221123899999999987 35555 57888888772 333222122 11100 001111 1122
Q ss_pred cccccCCChhHHHH--HHHH--HHHH-HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEE-eccC
Q 038499 349 EERESGGTPQVIQM--IRAA--LAFW-VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFN-IHSS 422 (609)
Q Consensus 349 ~~r~~~gtp~i~~~--~~aa--l~~~-~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~-~~~~ 422 (609)
..|.+-.|.||... +.|- ..|. .....|.+.|.+|++.+.-.+...|+.. |-++... ++|--+ +.-
T Consensus 360 HIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k------~fFDTLkI~~- 431 (1001)
T KOG2040|consen 360 HIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHK------PFFDTLKIRC- 431 (1001)
T ss_pred HhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccc------cccceEEEEe-
Confidence 33445567776432 1111 1111 1234578899999999999999999865 4444432 233222 221
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
+ -+.+++.....++ +|..|- . ..+.|-+|+
T Consensus 432 ~----------------~s~~~~l~rA~~~-~iNlr~------------~---------------------ed~tigvsl 461 (1001)
T KOG2040|consen 432 G----------------CSAEEVLDRAAKR-QINLRL------------V---------------------EDGTIGVSL 461 (1001)
T ss_pred c----------------CcHHHHHHHHHhh-cCceEE------------e---------------------ecCceEEee
Confidence 1 1456666666554 576661 1 258899999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 038499 503 PYYMSNEEFEFTLEALE 519 (609)
Q Consensus 503 ~~~~t~eeid~ll~al~ 519 (609)
--..+++|++.++..+.
T Consensus 462 DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 462 DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cccccHHHHHHHHHHHc
Confidence 88899999999998774
No 392
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.44 E-value=0.01 Score=59.08 Aligned_cols=338 Identities=15% Similarity=0.143 Sum_probs=177.4
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
|-+.+.|.++....+... ++.. -+ -..++.+-+++..+.+=+. +.++||.||+.++= +.++.-
T Consensus 60 ghchp~VV~A~~kQmat~--~tN~--RF---lhd~lv~cA~~l~stlPeL---svc~F~NSGSEAND-LALRLA------ 122 (452)
T KOG1403|consen 60 GHCHPEVVRAGAKQMATI--STNN--RF---LHDELVQCARTLTSTLPEL---SVCFFVNSGSEAND-LALRLA------ 122 (452)
T ss_pred ccCCHHHHHHHHHHHhHh--cccc--hh---hHHHHHHHHHHHhhcCCCc---eEEEEecCCchhhH-HHHHHH------
Confidence 567788888888777533 2221 11 1244455455555444443 37899989988732 222211
Q ss_pred hHHHHHHhhh-cCCCceEEEECCCCccchHHHHHH-------cCc---eEEE--E-ecCC--CC-------------CCC
Q 038499 167 ILREKLIKCL-RDEERWVVFVGPHEHHSNLLSWRQ-------SLA---EVVE--I-GLDD--DG-------------LLD 217 (609)
Q Consensus 167 ~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~~~~~~~-------~G~---~vv~--v-~~~~--~g-------------~ld 217 (609)
+.+ +..| |++-+..||+...+.-+ .|. +..+ | |..+ .| ..-
T Consensus 123 -------R~ftkhqD---vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Y 192 (452)
T KOG1403|consen 123 -------RNFTKHQD---VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALY 192 (452)
T ss_pred -------HhhcccCc---eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhh
Confidence 112 2334 66666666665543221 121 2222 2 1111 11 122
Q ss_pred HHHHHHHHhhhccCC-CceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc---ccCCCCCCCC
Q 038499 218 IEALRSKLELYKDAK-RPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE---IDVRSGQTDG 288 (609)
Q Consensus 218 ~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~---id~~~~~~~~ 288 (609)
.+.+++.+......+ .....+..+-++-.|.+.| .+++++..|.+|...|.|+.+-+ |-+. +.+.-. .--
T Consensus 193 ad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y-~fi 271 (452)
T KOG1403|consen 193 ADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTY-NFI 271 (452)
T ss_pred hhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhh-ccc
Confidence 234555544321112 2223344556677788887 56899999999999999999653 2221 111110 012
Q ss_pred ccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHH
Q 038499 289 YDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALA 368 (609)
Q Consensus 289 ~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~ 368 (609)
.|+++.. |-+|-....+.++..+++. +.+ ++.-+.|.|- ..|.|-..+...+.+.
T Consensus 272 PDIVtmg--KpmGNGhPVa~VattkeIA--~Af-----~atgv~YFNT----------------yGGnPVsCAv~laVm~ 326 (452)
T KOG1403|consen 272 PDIVTMG--KPMGNGHPVAAVATTKEIA--QAF-----HATGVEYFNT----------------YGGNPVSCAVGLAVMR 326 (452)
T ss_pred cchheec--ccCCCCCeeeEEeccHHHH--HHh-----ccccceehhc----------------cCCCchhHHHHHHHHH
Confidence 3666543 7776555578888888872 222 1212223221 1344443333233322
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEE-eccCCCCCcCCCCCCCCCCCC--CChHH
Q 038499 369 FWVKEYIGHEVIKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFN-IHSSTINSSLGENTKTETDKP--LHGPF 444 (609)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~-~~~~~~~~~~~~~~~~~~~~~--l~~~~ 444 (609)
....+.+..+.+...+++...|.++. ..+++|.. ...+.|+-. +.. +. ..+.+ ..+..
T Consensus 327 -----v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv--RGvGLFiGIdLVk-D~----------~tRtP~tk~A~~ 388 (452)
T KOG1403|consen 327 -----VCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDV--RGVGLFIGIDLVK-DR----------KTRTPDTKEAHW 388 (452)
T ss_pred -----HHhhhhHHHHHHHHHHHHHHHHHHHhhhccceecc--ccceEEEeeeeec-cc----------ccCCCcHHHHHH
Confidence 33356677777777777777776542 33555552 223333322 111 10 01111 12456
Q ss_pred HHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 445 VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 445 v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+...|.+.++|.+..- || ..+.+.|-.+..-+++++++++..+.+++.-
T Consensus 389 ~v~rlke~y~VLlsaD----GP---------------------------h~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 389 VVNRLKELYRVLLSAD----GP---------------------------HRNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred HHHHHHHhhhEEEecC----CC---------------------------CCceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 7778888888988732 12 1356777777777899999999999888764
Q ss_pred cc
Q 038499 525 GQ 526 (609)
Q Consensus 525 ~~ 526 (609)
..
T Consensus 438 me 439 (452)
T KOG1403|consen 438 ME 439 (452)
T ss_pred HH
Confidence 43
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.13 E-value=0.015 Score=59.32 Aligned_cols=214 Identities=15% Similarity=0.151 Sum_probs=122.6
Q ss_pred CCHHHHHHHHhhhccCCCce-EEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCc--------ccccCC
Q 038499 216 LDIEALRSKLELYKDAKRPI-LGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPY--------VEIDVR 282 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~-lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~--------~~id~~ 282 (609)
-+++++++.|.++.....|. .+++...++.-|.-.- .+.+-+++++||+.++||++|.++. ...++.
T Consensus 253 ~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 253 GCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred hHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 36778888998765444454 6677777777776532 6789999999999999999987543 233333
Q ss_pred CCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH
Q 038499 283 SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362 (609)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~ 362 (609)
. -+|+|+|| -|+.. .|+ +-+.++ .--.|+.. -....|-|.-.-+
T Consensus 333 ~----PpD~vTFS-KK~q~----gGf-fh~~~f---rpn~pYri-----------------------fNTWmGdP~k~ll 376 (484)
T KOG1405|consen 333 S----PPDVVTFS-KKFQT----GGF-FHDEEF---RPNEPYRI-----------------------FNTWMGDPSKNLL 376 (484)
T ss_pred C----Cccceehh-hhhhc----Ccc-ccCccc---CCCchHHH-----------------------hhhhcCChHHHHH
Confidence 2 46888887 24432 142 333333 11112210 0011344433332
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
+...+ +.+-.+.+........+.+.++|.++ |+. +.+. ..|..++++.... +.
T Consensus 377 l~~vv-----~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~--~~~~-RGrGTF~a~d~ps-~~-------------- 433 (484)
T KOG1405|consen 377 LEEVV-----QEIKREDLLNNVAHVGKALLKGLLELQAKYPGK--INNL-RGRGTFIAWDCPS-GS-------------- 433 (484)
T ss_pred HHHHH-----HHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchh--hhcc-cccceEEEEeCCC-hH--------------
Confidence 23222 23334556666666667777766543 332 1111 1245555555544 21
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
-.+.++..+ ...|+.+. || + ...||+-...--++...+-+++.+
T Consensus 434 --~Rdk~i~~~-~~nGv~~G-GC--g------------------------------~~siRfRPsLvf~~~Ha~i~l~~~ 477 (484)
T KOG1405|consen 434 --IRDKLILIA-RLNGVNLG-GC--G------------------------------DKSIRFRPSLVFRKHHADIFLDIF 477 (484)
T ss_pred --HHHHHHHHH-HHcCceec-cc--c------------------------------cceeeeccceeehhhhHHHHHHHH
Confidence 234455555 45687664 33 2 356788777667888899999999
Q ss_pred HHHHHh
Q 038499 519 EFIAIY 524 (609)
Q Consensus 519 ~~v~~~ 524 (609)
.+++..
T Consensus 478 ~k~l~~ 483 (484)
T KOG1405|consen 478 DKILAG 483 (484)
T ss_pred HHHhcc
Confidence 888754
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.69 E-value=0.02 Score=58.27 Aligned_cols=124 Identities=19% Similarity=0.181 Sum_probs=80.8
Q ss_pred EEEECCCCccchHHHHHHcCceEEEEec-C-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccccc---CHHHHHH
Q 038499 183 VVFVGPHEHHSNLLSWRQSLAEVVEIGL-D-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS---DTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~---dl~~I~~ 257 (609)
.|+++.+++......+...|+.+..+.. + .+..+|.+.+.+.+.+.. +.-.+++=--++||||+=. ..++|.+
T Consensus 148 ~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p--~gs~ilLhaCaHNPTGvDPt~eqw~ki~~ 225 (427)
T KOG1411|consen 148 DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP--EGSIILLHACAHNPTGVDPTKEQWEKISD 225 (427)
T ss_pred ceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCC--CCcEEEeehhhcCCCCCCccHHHHHHHHH
Confidence 6999999998877888889998877654 2 356788888777776421 1222333344679999842 2567899
Q ss_pred HHHHhCCeEEEeccccCC-cccccCCCC-----CCCCcc-EEEEcCCCCCCCCCC--cEEE
Q 038499 258 LLHQYGGFACFDFAASGP-YVEIDVRSG-----QTDGYD-AIFLSTHKFLGGPGS--PGIL 309 (609)
Q Consensus 258 la~~~g~~vivD~A~~~~-~~~id~~~~-----~~~~~D-~v~~S~hK~lggp~g--~G~L 309 (609)
+.++.+.+-++|-|+.+. .-.+|-.+. ...+.+ +++-|+.|.+| ..| .|.+
T Consensus 226 ~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG-LYgERvGa~ 285 (427)
T KOG1411|consen 226 LIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG-LYGERVGAL 285 (427)
T ss_pred HhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc-hhhhcccee
Confidence 999999999999984432 222222211 012333 45669999987 433 5554
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.81 E-value=0.14 Score=47.34 Aligned_cols=55 Identities=15% Similarity=0.208 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhC----CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCcc
Q 038499 119 TTNMVHEASNYIKKCLG----GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHH 192 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g----~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (609)
..++++.+.+.+.+..| .+++ +|++| +|++.++..++..+ +.+|| .|+++.+.|+
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd-~Ivvt-~Ga~~al~~l~~~l---------------~dpGD--~VlVp~P~Y~ 152 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDAD-MIVLS-AGATAANEIIMFCI---------------ADPGD--AFLVPTPYYA 152 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchh-heEEc-CCHHHHHHHHHHHH---------------cCCCC--EEEEeCCCCC
Confidence 34556666666666656 3455 89998 89999999998887 48999 6888888775
No 396
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=94.60 E-value=0.48 Score=50.52 Aligned_cols=133 Identities=16% Similarity=0.131 Sum_probs=86.3
Q ss_pred eEEEECCCCccchH-HHHHHcCceEEEEec--C-C----CCCCCHHHHHHHHhhhccCCCce-EEEEecccCccccccCH
Q 038499 182 WVVFVGPHEHHSNL-LSWRQSLAEVVEIGL--D-D----DGLLDIEALRSKLELYKDAKRPI-LGSFSACSNVTGIYSDT 252 (609)
Q Consensus 182 ~~Vlv~~~~h~s~~-~~~~~~G~~vv~v~~--~-~----~g~ld~e~L~~al~~~~~~~~~~-lv~~s~~sn~TG~~~dl 252 (609)
|++++++..|.-.. ..+++.|+..+.|.. + . .|++|...+++.|+++...+++- +++-.-..+.-|...-+
T Consensus 232 Pt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi 311 (838)
T KOG0630|consen 232 PTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMI 311 (838)
T ss_pred ceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHH
Confidence 58999998888654 457888875444422 2 2 35899999999999877666554 44445566677888889
Q ss_pred HHHHHHHHHhC-CeEEEeccccCC---cccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 253 RSIARLLHQYG-GFACFDFAASGP---YVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 253 ~~I~~la~~~g-~~vivD~A~~~~---~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
-+|.++|++|+ .|++.-+-.-+. ..+-+...-.....|.+....--|+|-|..+ ++...+.+
T Consensus 312 ~kildi~eahakfWLHasGhaiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaP-iV~LHRPl 377 (838)
T KOG0630|consen 312 LKILDICEAHAKFWLHASGHAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAP-IVLLHRPL 377 (838)
T ss_pred HHHHHHHHHhhheeEeeccchhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCc-eEEeeccc
Confidence 99999999996 888876532111 1111110000123588888888999988754 44444433
No 397
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=94.08 E-value=0.2 Score=49.26 Aligned_cols=144 Identities=15% Similarity=0.044 Sum_probs=89.5
Q ss_pred cCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC---CCCCHHHHHHHHhhhccCCCceEEEEecc-cCcc-ccccC
Q 038499 177 RDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD---GLLDIEALRSKLELYKDAKRPILGSFSAC-SNVT-GIYSD 251 (609)
Q Consensus 177 ~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~---g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~T-G~~~d 251 (609)
+|..+ .|+-......|-..+....|.+.+.|..--+ -.-|++++++.+.+. +.-.++++... +-.. -....
T Consensus 100 rpkak-yiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~---g~dcilci~sttscfapr~pd~ 175 (432)
T KOG3843|consen 100 RPKAK-YIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEEL---GEDCILCIHSTTSCFAPRSPDN 175 (432)
T ss_pred CCccc-EEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHh---CCceEEEEeecccccCCCCCch
Confidence 44444 6777777777877888889999887753222 245889999988863 22223333221 1111 11234
Q ss_pred HHHHHHHHHHhCCeEEEeccccCCcccccCCC----CCCCCccEEEEcCCCCCCCCCCcEEEEE-echhhccCCCCCCcc
Q 038499 252 TRSIARLLHQYGGFACFDFAASGPYVEIDVRS----GQTDGYDAIFLSTHKFLGGPGSPGILLM-TKALYQLGSFPPSTC 326 (609)
Q Consensus 252 l~~I~~la~~~g~~vivD~A~~~~~~~id~~~----~~~~~~D~v~~S~hK~lggp~g~G~L~~-~~~~~~l~~~~p~~~ 326 (609)
+++|+.+|..|++.-+|..|++.-...- ++. .....+|+++-|..|.|.-|-|..++.. ++.. +..+...++
T Consensus 176 leaiaaica~~diphivnnayglqsee~-i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~--iq~iak~yp 252 (432)
T KOG3843|consen 176 LEAIAAICAAHDIPHIVNNAYGLQSEEC-IHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNF--IQEIAKMYP 252 (432)
T ss_pred HHHHHHHHHccCchhhhccccccchHHH-HHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHH--HHHHHHhCC
Confidence 8999999999999999999977643211 111 1123679999999999998876333332 3444 344444444
Q ss_pred C
Q 038499 327 G 327 (609)
Q Consensus 327 g 327 (609)
|
T Consensus 253 g 253 (432)
T KOG3843|consen 253 G 253 (432)
T ss_pred C
Confidence 4
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=64.85 E-value=48 Score=32.26 Aligned_cols=75 Identities=19% Similarity=0.084 Sum_probs=43.2
Q ss_pred EEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh
Q 038499 183 VVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY 262 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~ 262 (609)
+.++...........++..|++++..+.+ |.+.|.++++ +--.++++....+ .....-...|++.|++.
T Consensus 25 V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~-----g~d~v~~~~~~~~-~~~~~~~~~li~Aa~~a 93 (233)
T PF05368_consen 25 VRALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALK-----GVDAVFSVTPPSH-PSELEQQKNLIDAAKAA 93 (233)
T ss_dssp EEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-----TCSEEEEESSCSC-CCHHHHHHHHHHHHHHH
T ss_pred cEEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHc-----CCceEEeecCcch-hhhhhhhhhHHHhhhcc
Confidence 44433333333345677789998876655 8999999998 3334443333222 22223345688999998
Q ss_pred CCeEEE
Q 038499 263 GGFACF 268 (609)
Q Consensus 263 g~~viv 268 (609)
|+..++
T Consensus 94 gVk~~v 99 (233)
T PF05368_consen 94 GVKHFV 99 (233)
T ss_dssp T-SEEE
T ss_pred ccceEE
Confidence 875554
No 399
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=64.22 E-value=53 Score=30.97 Aligned_cols=45 Identities=22% Similarity=0.227 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEecccCccccccCH--HHHHHHHHHhC
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT--RSIARLLHQYG 263 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl--~~I~~la~~~g 263 (609)
.+|.+++++++.+.+. .....++++..+++ ..|. .++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~-~gv~avAV~~~fS~---~np~hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKD-KGVEAVAVSLLFSY---RNPEHEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHh-CCCCEEEEECccCC---CCHHHHHHHHHHHHhcC
Confidence 5788899888876432 23666666654433 3343 45788888765
No 400
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=62.81 E-value=60 Score=27.87 Aligned_cols=80 Identities=19% Similarity=0.129 Sum_probs=53.6
Q ss_pred EEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHH
Q 038499 184 VFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARL 258 (609)
Q Consensus 184 Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~l 258 (609)
+...+.++|... ..++..|.++..++.+ .+.+++.+.+.+ .++.++.++.. .+.......++++.
T Consensus 5 ~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~----~~~~~l~~~~~~----~~pd~V~iS~~--~~~~~~~~~~l~~~ 74 (121)
T PF02310_consen 5 LACVPGEVHPLGLLYLAAYLRKAGHEVDILDAN----VPPEELVEALRA----ERPDVVGISVS--MTPNLPEAKRLARA 74 (121)
T ss_dssp EEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESS----B-HHHHHHHHHH----TTCSEEEEEES--SSTHHHHHHHHHHH
T ss_pred EEeeCCcchhHHHHHHHHHHHHCCCeEEEECCC----CCHHHHHHHHhc----CCCcEEEEEcc--CcCcHHHHHHHHHH
Confidence 444455555432 2345679999988765 456888888876 57888888753 33445556788888
Q ss_pred HHHh--CCeEEEecccc
Q 038499 259 LHQY--GGFACFDFAAS 273 (609)
Q Consensus 259 a~~~--g~~vivD~A~~ 273 (609)
+|+. ++.+++=+.+.
T Consensus 75 ~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 75 IKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHTTCTTSEEEEEESSS
T ss_pred HHhcCCCCEEEEECCch
Confidence 8876 78888877653
No 401
>PRK06450 threonine synthase; Validated
Probab=57.84 E-value=2.5e+02 Score=29.49 Aligned_cols=78 Identities=22% Similarity=0.216 Sum_probs=47.9
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceE
Q 038499 105 YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWV 183 (609)
Q Consensus 105 ~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~ 183 (609)
+.|| ++ |+-.+....++..+++ .|. . .|+..++|-++ ++......+|+ +.+
T Consensus 73 ~~nP-TG-SfKDRga~~~i~~a~~-----~g~--~-~vv~aSsGN~g~slA~~aa~~G~------------------~~~ 124 (338)
T PRK06450 73 FLNP-TG-SYKDRGSVTLISYLAE-----KGI--K-QISEDSSGNAGASIAAYGAAAGI------------------EVK 124 (338)
T ss_pred CCCC-cC-CCHHHHHHHHHHHHHH-----cCC--C-EEEEECCcHHHHHHHHHHHHcCC------------------CEE
Confidence 3455 32 4555555555555444 243 2 56665555443 55555555542 347
Q ss_pred EEECCCCccchHHHHHHcCceEEEEec
Q 038499 184 VFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 184 Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
|+++...-.......+..|++|+.++-
T Consensus 125 i~vP~~~~~~k~~~i~~~GA~vi~v~~ 151 (338)
T PRK06450 125 IFVPETASGGKLKQIESYGAEVVRVRG 151 (338)
T ss_pred EEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 888887766777788889999999974
No 402
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=54.36 E-value=1e+02 Score=27.70 Aligned_cols=78 Identities=13% Similarity=-0.080 Sum_probs=51.7
Q ss_pred EEEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
++.+.+.+.|..- ..++..|.+|++...+ +.++++.+++.+ .++.+|.+|...+ .....++++.+
T Consensus 7 l~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~----vp~e~i~~~a~~----~~~d~V~lS~~~~--~~~~~~~~~~~ 76 (137)
T PRK02261 7 VLGVIGADCHAVGNKILDRALTEAGFEVINLGVM----TSQEEFIDAAIE----TDADAILVSSLYG--HGEIDCRGLRE 76 (137)
T ss_pred EEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEcCccc--cCHHHHHHHHH
Confidence 4455556666543 2346689999998765 578888888876 5788888876544 33345677778
Q ss_pred HHHHh---CCeEEEec
Q 038499 258 LLHQY---GGFACFDF 270 (609)
Q Consensus 258 la~~~---g~~vivD~ 270 (609)
.+++. ++.+++=+
T Consensus 77 ~L~~~~~~~~~i~vGG 92 (137)
T PRK02261 77 KCIEAGLGDILLYVGG 92 (137)
T ss_pred HHHhcCCCCCeEEEEC
Confidence 88776 34444443
No 403
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=53.29 E-value=68 Score=28.81 Aligned_cols=58 Identities=12% Similarity=-0.018 Sum_probs=43.4
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCC
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGG 264 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~ 264 (609)
.++..|.+|+....+ ..++.+.++..+ .++.++.+|+-. |.....++++.+.+++.|+
T Consensus 24 ~l~~~GfeVi~LG~~----v~~e~~v~aa~~----~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 24 AFTNAGFNVVNLGVL----SPQEEFIKAAIE----TKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 456689999988876 577888777765 578888888765 3444568889999998864
No 404
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=52.89 E-value=98 Score=26.65 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=50.6
Q ss_pred EEEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
++.+.+.++|..- ..++..|.+|+....+ +.++++.+.+.+ .++.++.+|.. .+.....+.++++
T Consensus 3 l~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~----~~~~~l~~~~~~----~~pdvV~iS~~--~~~~~~~~~~~i~ 72 (119)
T cd02067 3 VIATVGGDGHDIGKNIVARALRDAGFEVIDLGVD----VPPEEIVEAAKE----EDADAIGLSGL--LTTHMTLMKEVIE 72 (119)
T ss_pred EEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEecc--ccccHHHHHHHHH
Confidence 3445556666543 2345679999766532 678888888775 57888888754 2334466788888
Q ss_pred HHHHh---CCeEEEecc
Q 038499 258 LLHQY---GGFACFDFA 271 (609)
Q Consensus 258 la~~~---g~~vivD~A 271 (609)
.+++. ++.+++=+.
T Consensus 73 ~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 73 ELKEAGLDDIPVLVGGA 89 (119)
T ss_pred HHHHcCCCCCeEEEECC
Confidence 88876 355555544
No 405
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=52.82 E-value=77 Score=35.22 Aligned_cols=69 Identities=14% Similarity=0.049 Sum_probs=50.1
Q ss_pred HHHcC-ceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccC
Q 038499 198 WRQSL-AEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASG 274 (609)
Q Consensus 198 ~~~~G-~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~ 274 (609)
++..| .+|..++... ..++.+++.+.+.+ .+|.+|.++. .|.......++++.+++. ++.+|+=+.|+.
T Consensus 32 L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~----~~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT-GPLTDEKLVERLRA----HCPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred HHhcCCcceEEecccc-cCCCHHHHHHHHHh----cCcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 45678 6888886543 34678888888875 5788888874 344555567888989887 899998877643
No 406
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=47.39 E-value=4e+02 Score=28.86 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=30.0
Q ss_pred CHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH---hCCeEEEecc
Q 038499 217 DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ---YGGFACFDFA 271 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~---~g~~vivD~A 271 (609)
+.+++.+++.......+..+|++..+-...-...-++++.++++. +.+++++|++
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 667777777543211134577777553222122235556555554 4567888875
No 407
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=44.05 E-value=1.5e+02 Score=28.52 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=53.0
Q ss_pred EEEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
++.+.+-+.|..- ..++..|.+|+.+..+ +.++++.+++.+ .++.+|.+|...+. ....+.++.+
T Consensus 86 l~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~----~p~~~l~~~~~~----~~~d~v~lS~~~~~--~~~~~~~~i~ 155 (201)
T cd02070 86 VIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRD----VPPEEFVEAVKE----HKPDILGLSALMTT--TMGGMKEVIE 155 (201)
T ss_pred EEEecCCccchHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccccc--cHHHHHHHHH
Confidence 3344455677643 2346789999877654 678999988876 57888888764333 3556788888
Q ss_pred HHHHhC----CeEEEecc
Q 038499 258 LLHQYG----GFACFDFA 271 (609)
Q Consensus 258 la~~~g----~~vivD~A 271 (609)
.+++.+ +.+++=+.
T Consensus 156 ~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 156 ALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred HHHHCCCCcCCeEEEECC
Confidence 888763 45666554
No 408
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=42.55 E-value=1.5e+02 Score=28.56 Aligned_cols=31 Identities=13% Similarity=-0.047 Sum_probs=23.5
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEE
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv 268 (609)
-.++++|. +|.-.++-++++.+|++|+.+|.
T Consensus 111 Dvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 111 DVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred CEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 34555653 57777889999999999998774
No 409
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.98 E-value=1.4e+02 Score=29.95 Aligned_cols=62 Identities=13% Similarity=0.007 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEeccc----CccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACS----NVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~s----n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
..++++++.+++.-...++..++++.-+. +++-...|+..|..+.+..++.+++|..|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 46788888777654434555665553132 233335788888888887999999999998774
No 410
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=38.91 E-value=55 Score=30.54 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=38.3
Q ss_pred CHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC--CeEEEeccccCCc
Q 038499 217 DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG--GFACFDFAASGPY 276 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g--~~vivD~A~~~~~ 276 (609)
|..+++++++. ....+++ -+|.+..++++.++++++| +++++|-..+...
T Consensus 12 ~~~~le~~les-----~~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~ 63 (181)
T COG1954 12 DNKDLEKALES-----ESQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSN 63 (181)
T ss_pred hHHHHHHHhcC-----CCeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccCC
Confidence 56788889983 4555444 3478899999999999986 6888998877653
No 411
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=38.58 E-value=1.1e+02 Score=27.20 Aligned_cols=65 Identities=11% Similarity=-0.055 Sum_probs=45.8
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCC---eEEEecc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGG---FACFDFA 271 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~---~vivD~A 271 (609)
.++..|.+|+....+ ..++.+.++..+ .++.++.+|+-. |.....++++.+.+++.|+ .+++=++
T Consensus 22 ~L~~~GfeVidLG~~----v~~e~~v~aa~~----~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 22 AFTEAGFNVVNLGVL----SPQEEFIDAAIE----TDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 456689999988776 567887777665 578888887643 3445567889999988754 4555544
No 412
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=37.46 E-value=4.8e+02 Score=26.89 Aligned_cols=120 Identities=15% Similarity=0.021 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhCC-CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECC--CCcc--chH
Q 038499 121 NMVHEASNYIKKCLGG-GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGP--HEHH--SNL 195 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~-~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~--~~h~--s~~ 195 (609)
+..+++++.+++.--. -.+.++|.|-+.+.+.+..+..+. +.+.+-.|+|.. +.+. -..
T Consensus 100 ~~~~~a~~~ia~~~a~~i~dg~~IlTh~~S~~v~~~l~~A~----------------~~~k~~~V~VtESRP~~eG~~~a 163 (301)
T COG1184 100 DRVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVLKTAA----------------DRGKRFKVIVTESRPRGEGRIMA 163 (301)
T ss_pred HHHHHHHHHHHHHHHhhccCCCEEEEecCcHHHHHHHHHhh----------------hcCCceEEEEEcCCCcchHHHHH
Confidence 3344455555443211 112368888666665555554443 345443455532 2222 233
Q ss_pred HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEe
Q 038499 196 LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFD 269 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD 269 (609)
..+++.|.++..|.- .+....+++ -.++++=...-...|.+.. .--|+..||+++.++++=
T Consensus 164 k~L~~~gI~~~~I~D--------sa~~~~~~~-----vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 164 KELRQSGIPVTVIVD--------SAVGAFMSR-----VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HHHHHcCCceEEEec--------hHHHHHHHh-----CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 456778988888862 233334441 1223322233333444433 456888999999887653
No 413
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.14 E-value=1.4e+02 Score=31.55 Aligned_cols=61 Identities=15% Similarity=-0.070 Sum_probs=41.8
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecc-----c-CccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSAC-----S-NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~-----s-n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
.+++++..+++.-...++..++ ++++ . ..+=...|+..|..+-+.+++.+|+|.+|+.|+.
T Consensus 219 ~t~ee~~~A~e~i~~~Gn~~vi-L~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 219 ATIDEWLMAAEYILAAGNPNVI-LCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCHHHHHHHHHHHHHcCCCeEE-EEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 3788887777643333555554 4444 2 2233557899999887777999999999998754
No 414
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.97 E-value=2.2e+02 Score=24.74 Aligned_cols=78 Identities=17% Similarity=0.035 Sum_probs=49.8
Q ss_pred EEEECCCCccchHH-----HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNLL-----SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~-----~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
++.+.+.+.|..-. .++..|.+++....+ +.++++.+++.+ .++.++.+|... +-....++++.+
T Consensus 3 v~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~----vp~e~~~~~a~~----~~~d~V~iS~~~--~~~~~~~~~~~~ 72 (122)
T cd02071 3 LVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLR----QTPEEIVEAAIQ----EDVDVIGLSSLS--GGHMTLFPEVIE 72 (122)
T ss_pred EEEecCCChhHHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEcccc--hhhHHHHHHHHH
Confidence 45556666665432 245679999988754 567787777765 578888887653 223344678888
Q ss_pred HHHHh---CCeEEEec
Q 038499 258 LLHQY---GGFACFDF 270 (609)
Q Consensus 258 la~~~---g~~vivD~ 270 (609)
.+++. ++.+++=+
T Consensus 73 ~L~~~~~~~i~i~~GG 88 (122)
T cd02071 73 LLRELGAGDILVVGGG 88 (122)
T ss_pred HHHhcCCCCCEEEEEC
Confidence 88776 44555444
No 415
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=36.47 E-value=68 Score=32.71 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc--cchHHHHHH
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH--HSNLLSWRQ 200 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h--~s~~~~~~~ 200 (609)
...+++.++++...+++ ++++ .|+.++.... ..+ . ++.|+|+++-... ......+..
T Consensus 45 ~~~~~~~~~~l~~~~~D--lIi~-~gt~aa~~~~-~~~----------------~-~~iPVVf~~V~dp~~~~l~~~~~~ 103 (294)
T PF04392_consen 45 PEKLRQIARKLKAQKPD--LIIA-IGTPAAQALA-KHL----------------K-DDIPVVFCGVSDPVGAGLVDSLDR 103 (294)
T ss_dssp HHHHHHHHHHHCCTS-S--EEEE-ESHHHHHHHH-HH-----------------S-S-S-EEEECES-TTTTTS-S-SSS
T ss_pred HHHHHHHHHHHhcCCCC--EEEE-eCcHHHHHHH-Hhc----------------C-CCcEEEEEeccChhhhhccccccC
Confidence 34566666666555554 7777 6777654433 322 1 2256888765222 122223333
Q ss_pred cCceEEEEecCCCCCCCHHHHHHHHhhhccCCC-ceEEEEecccCccccccCHHHHHHHHHHhCCeEE
Q 038499 201 SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR-PILGSFSACSNVTGIYSDTRSIARLLHQYGGFAC 267 (609)
Q Consensus 201 ~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~-~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vi 267 (609)
.|..+.-|-.. .+++.--+.+.+.. +. .+++++-.++.+ ....-++.+.+.++++|+-++
T Consensus 104 ~~~nvTGv~~~----~~~~~~l~l~~~l~--P~~k~igvl~~~~~~-~~~~~~~~~~~~a~~~g~~l~ 164 (294)
T PF04392_consen 104 PGKNVTGVSER----PPIEKQLELIKKLF--PDAKRIGVLYDPSEP-NSVAQIEQLRKAAKKLGIELV 164 (294)
T ss_dssp --SSEEEEEE-------HHHHHHHHHHHS--TT--EEEEEEETT-H-HHHHHHHHHHHHHHHTT-EEE
T ss_pred CCCCEEEEECC----cCHHHHHHHHHHhC--CCCCEEEEEecCCCc-cHHHHHHHHHHHHHHcCCEEE
Confidence 34455555421 34444444343321 33 346555555544 334557788888999997654
No 416
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.12 E-value=2.2e+02 Score=23.62 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=42.0
Q ss_pred EEEECC--CCccchHHHHHHcCceEEEEecCCCCCCCHH--HHHHHHhhhccCCCceEEEEecccCccccc--cCHHHHH
Q 038499 183 VVFVGP--HEHHSNLLSWRQSLAEVVEIGLDDDGLLDIE--ALRSKLELYKDAKRPILGSFSACSNVTGIY--SDTRSIA 256 (609)
Q Consensus 183 ~Vlv~~--~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e--~L~~al~~~~~~~~~~lv~~s~~sn~TG~~--~dl~~I~ 256 (609)
+++++. ..-..+...+...|++.+.. ..++..... .|+..+. ++.+|++.. +.+ .-...+.
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~------~aD~VIv~t-----~~vsH~~~~~vk 68 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK------KADLVIVFT-----DYVSHNAMWKVK 68 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC------CCCEEEEEe-----CCcChHHHHHHH
Confidence 455555 22233445667789998888 222222333 4777776 344444321 222 1256788
Q ss_pred HHHHHhCCeEEE
Q 038499 257 RLLHQYGGFACF 268 (609)
Q Consensus 257 ~la~~~g~~viv 268 (609)
+.|+++|++++.
T Consensus 69 ~~akk~~ip~~~ 80 (97)
T PF10087_consen 69 KAAKKYGIPIIY 80 (97)
T ss_pred HHHHHcCCcEEE
Confidence 999999998764
No 417
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=34.65 E-value=1.4e+02 Score=31.04 Aligned_cols=90 Identities=19% Similarity=0.189 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh---C-CeEEEec-cccCCcccccCCCCCCCCc
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY---G-GFACFDF-AASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~---g-~~vivD~-A~~~~~~~id~~~~~~~~~ 289 (609)
.++.+.+++.|+.-...++.+-|++- .++|-|.+..-+.|++..+++ + +++.++. |+++||. +.+ .+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~-IA~------aA 150 (317)
T COG0616 79 FIGGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYY-IAL------AA 150 (317)
T ss_pred cccHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhh-hhc------cC
Confidence 34677777766654444667755553 678999998888887776664 2 5566655 4555543 222 56
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
|=++.+++=.+| .+|++.....+
T Consensus 151 d~I~a~p~si~G---SIGVi~~~~~~ 173 (317)
T COG0616 151 DKIVADPSSITG---SIGVISGAPNF 173 (317)
T ss_pred CEEEecCCceee---eceeEEecCCH
Confidence 888888888876 36787776555
No 418
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=33.94 E-value=2e+02 Score=27.55 Aligned_cols=79 Identities=22% Similarity=0.192 Sum_probs=53.4
Q ss_pred EEEECCCCccchHH-----HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNLL-----SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~-----~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
++.+.+-+.|..-. .++..|.+|+.+..+ +.++++.+++.+ .++.+|.+|...+.+ ...++++.+
T Consensus 88 v~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~----vp~e~~v~~~~~----~~pd~v~lS~~~~~~--~~~~~~~i~ 157 (197)
T TIGR02370 88 VCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRD----VPIDTVVEKVKK----EKPLMLTGSALMTTT--MYGQKDIND 157 (197)
T ss_pred EEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCC----CCHHHHHHHHHH----cCCCEEEEccccccC--HHHHHHHHH
Confidence 33344456665432 346679999988765 678999998886 578888887643332 445788888
Q ss_pred HHHHhC----CeEEEecc
Q 038499 258 LLHQYG----GFACFDFA 271 (609)
Q Consensus 258 la~~~g----~~vivD~A 271 (609)
.+++.+ +.+++=++
T Consensus 158 ~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 158 KLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred HHHHcCCCCCCEEEEECh
Confidence 888874 56666654
No 419
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=33.88 E-value=4.3e+02 Score=27.33 Aligned_cols=30 Identities=20% Similarity=0.099 Sum_probs=21.8
Q ss_pred ceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 181 RWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 181 ~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
+.+|+++...-......++.+|++|+.++-
T Consensus 76 ~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 76 PCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 336777776555556677889999998864
No 420
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=33.57 E-value=1.9e+02 Score=29.73 Aligned_cols=59 Identities=17% Similarity=0.109 Sum_probs=37.6
Q ss_pred CCCCCcEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC
Q 038499 136 GGQEDAMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD 212 (609)
Q Consensus 136 ~~~~~~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~ 212 (609)
..+...|+=..||.|+ ++.++..++|. +.++++++..-.--...++.+|++|+.+|..+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~~Gy------------------~~iivmP~~~S~er~~~l~a~GAevi~t~~~~ 118 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAAKGY------------------RLIIVMPETMSQERRKLLRALGAEVILTPGAP 118 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHHcCC------------------cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCC
Confidence 3455577766688887 66666666652 32455544433344456778999999998733
No 421
>PLN03013 cysteine synthase
Probab=33.09 E-value=3.2e+02 Score=29.80 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=37.2
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD 211 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~ 211 (609)
.|+-.++|.++ ++..+...+|+ +.+|+++..........++..|++|+.++.+
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~~G~------------------~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAASRGY------------------RLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC------------------CEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 46655566665 66666666552 3478888877777778888999999998643
No 422
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=32.87 E-value=3.8e+02 Score=28.97 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=35.8
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|-++ ++......+|+ +.+|+++...-..-....+..|++|+.++-
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~------------------~~~IvvP~~~~~~K~~~ira~GAeVv~v~~ 188 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGF------------------KVTVHMSADAKQWKKDKLRSKGVTVVEYET 188 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCC------------------CEEEEECCCCcHHHHHHHHHCCCEEEEECC
Confidence 35554455554 66666666552 447888877666777788899999999973
No 423
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=32.77 E-value=2e+02 Score=27.93 Aligned_cols=81 Identities=12% Similarity=0.016 Sum_probs=54.6
Q ss_pred ceEEEECCCCccchHH-----HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHH
Q 038499 181 RWVVFVGPHEHHSNLL-----SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSI 255 (609)
Q Consensus 181 ~~~Vlv~~~~h~s~~~-----~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I 255 (609)
+.++.+.+-++|..-. .++..|.+|+....+ +.++++.+++.+ .++.+|.+|...+. ....++++
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~----vp~e~~v~~~~~----~~~~~V~lS~~~~~--~~~~~~~~ 159 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVM----VPIEKILEAAKE----HKADIIGLSGLLVP--SLDEMVEV 159 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEccchhc--cHHHHHHH
Confidence 3344455557776432 245679999998765 678999988886 57888888765433 34567788
Q ss_pred HHHHHHh--CCeEEEecc
Q 038499 256 ARLLHQY--GGFACFDFA 271 (609)
Q Consensus 256 ~~la~~~--g~~vivD~A 271 (609)
.+.+++. ++.+++=++
T Consensus 160 i~~L~~~~~~~~i~vGG~ 177 (213)
T cd02069 160 AEEMNRRGIKIPLLIGGA 177 (213)
T ss_pred HHHHHhcCCCCeEEEECh
Confidence 8888776 455555443
No 424
>smart00642 Aamy Alpha-amylase domain.
Probab=32.75 E-value=36 Score=31.73 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=25.8
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
++...|...+++++++.||++|+.+++|.+
T Consensus 62 i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 62 IDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred CCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 334557888999999999999999999987
No 425
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.43 E-value=38 Score=34.23 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=30.2
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
+.-+..+...-|...+++++++.||++|+.||+|.+
T Consensus 38 ~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 38 PSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp ESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceeeeccccccchhhhhhhhhhccccccceEEEeee
Confidence 334445666779999999999999999999999987
No 426
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.32 E-value=6e+02 Score=25.82 Aligned_cols=69 Identities=7% Similarity=-0.046 Sum_probs=41.9
Q ss_pred CccchHHHHHHcCceEEEE-ecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeE
Q 038499 190 EHHSNLLSWRQSLAEVVEI-GLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFA 266 (609)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v-~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~v 266 (609)
.|++...-.+.+|.+++.+ ...++....+.+|.+.++.-+ ..+.++++...-.+. +.+..++++.|+.+
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik-~~~v~~if~e~~~~~-------~~~~~ia~~~gv~v 252 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVK-KEKVPAVFVESTVND-------RLMKQVAKETGAKI 252 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHH-HhCCCEEEEeCCCCh-------HHHHHHHHHhCCcc
Confidence 4566666778899998764 333445566666655543211 146777666543332 55667788888865
No 427
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=30.23 E-value=3.9e+02 Score=27.08 Aligned_cols=31 Identities=16% Similarity=0.092 Sum_probs=24.8
Q ss_pred ceEEEECCCCccchHHHHHHcCceEEEEecC
Q 038499 181 RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD 211 (609)
Q Consensus 181 ~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~ 211 (609)
+.+|+++...-.......+..|++|+.++.+
T Consensus 78 ~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 78 RFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred eEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3478888777777778888899999999854
No 428
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=29.53 E-value=1.3e+02 Score=28.80 Aligned_cols=50 Identities=12% Similarity=-0.061 Sum_probs=37.4
Q ss_pred HHHHHHHhhhc-cCC-Cc-eEEEEecccCccccccCHHHHHHHHHHhCCeEEE
Q 038499 219 EALRSKLELYK-DAK-RP-ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 219 e~L~~al~~~~-~~~-~~-~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv 268 (609)
++|..+++..+ ..+ +. .+|+++-.+|..|.+.|.+.-+++++++|+.++.
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 78877776532 211 23 4888999999999999888778999999988764
No 429
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=28.51 E-value=2.8e+02 Score=28.28 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=36.3
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-+++|.++ ++..+.+.+|+ +..|+++...-.......+..|++|+.++.
T Consensus 61 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 61 VLIEATSGNTGIALAMIAALKGY------------------RMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred EEEEECCChHHHHHHHHHHHcCC------------------eEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 56666566554 56666665552 336888877667777788899999999874
No 430
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=28.50 E-value=4.9e+02 Score=28.36 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=35.5
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|-++ ++..+...+|+ +.+|+++...-..-....+..|++|+.++-
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~------------------~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~ 206 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGF------------------QVTVHMSADAKQWKKDKLRSKGVTVVEYES 206 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 35555455554 56666666652 337888877666667778899999999974
No 431
>KOG3055 consensus Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=28.43 E-value=5.3e+02 Score=24.61 Aligned_cols=66 Identities=24% Similarity=0.320 Sum_probs=40.5
Q ss_pred cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEe--cCCCCCCCH
Q 038499 141 AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIG--LDDDGLLDI 218 (609)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~--~~~~g~ld~ 218 (609)
.||..|..+.+|....+... ||. .=++.--..+|...|.+-|+.-+.|. +=.+|.+|+
T Consensus 62 HVImLGPn~~~AA~~ALh~~-----------------Pg~---LQvGGGIN~~Nc~~wl~egASkVIVTSwlF~~g~fdL 121 (263)
T KOG3055|consen 62 HVIMLGPNSQAAAIGALHAY-----------------PGG---LQVGGGINSENCMSWLEEGASKVIVTSWLFNNGKFDL 121 (263)
T ss_pred eEEEECCCcHHHHHHHHHhC-----------------CCc---eeecCccChHHHHHHHHhcCceEEEEEEeccCCcccH
Confidence 56666666666544443332 443 45555566677788888887544332 223788899
Q ss_pred HHHHHHHh
Q 038499 219 EALRSKLE 226 (609)
Q Consensus 219 e~L~~al~ 226 (609)
+.|++...
T Consensus 122 ~RLk~i~s 129 (263)
T KOG3055|consen 122 ERLKDIVS 129 (263)
T ss_pred HHHHHHHH
Confidence 98887654
No 432
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=28.39 E-value=6.3e+02 Score=26.03 Aligned_cols=70 Identities=4% Similarity=-0.190 Sum_probs=42.7
Q ss_pred CccchHHHHHHcCceEEEE-ecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEE
Q 038499 190 EHHSNLLSWRQSLAEVVEI-GLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFAC 267 (609)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v-~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vi 267 (609)
.|+++..-.+.+|.+++.+ ...++....+.+|.+.++.-+ ..+.++|+...-.| -+.+..++++.|+.++
T Consensus 209 ~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik-~~~v~~If~e~~~~-------~~~~~~la~e~g~~v~ 279 (311)
T PRK09545 209 FHDAYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLV-EQKATCVFAEPQFR-------PAVIESVAKGTSVRMG 279 (311)
T ss_pred ECchHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHH-HcCCCEEEecCCCC-------hHHHHHHHHhcCCeEE
Confidence 6677777788889887643 334445566666655554211 15677877664333 3566677788887653
No 433
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=27.92 E-value=1.7e+02 Score=31.42 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=40.7
Q ss_pred eEEEEecCCCC-CCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 204 EVVEIGLDDDG-LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 204 ~vv~v~~~~~g-~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
++.+++.++.. ..+.+.|.+.+.... ....++++|- .--|.+.+++.+.++|++.|+++++|-
T Consensus 115 QllRvD~Ee~~~~~~~~~ll~~~~~~l--~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 115 QLLRLDFEEKFPIEDENKLLEKIKNAL--KSFDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred eEEEecccccCcchhHHHHHHHHHHHh--hcCCEEEEec--cccccchhHHHHHHHHHHcCCcEEECC
Confidence 44555544322 134455555554311 2455666653 456999999999999999999999994
No 434
>PRK00685 metal-dependent hydrolase; Provisional
Probab=27.55 E-value=4.6e+02 Score=25.17 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=43.4
Q ss_pred EEEECCCCccchHHHHH-HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH
Q 038499 183 VVFVGPHEHHSNLLSWR-QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ 261 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~ 261 (609)
.++.++..+..-...+. ..+.++..++......+++++..+.+.. -+++.++.+|-........+.+++.+.+++
T Consensus 137 i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~~~h~~~~ea~~~~~~----~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~ 212 (228)
T PRK00685 137 IYHAGDTGLFSDMKLIGELHKPDVALLPIGDNFTMGPEDAALAVEL----IKPKIVIPMHYNTFPLIEQDPEKFKALVEG 212 (228)
T ss_pred EEEecCccchhHHHHHHHhhCCCEEEEecCCccccCHHHHHHHHHh----hCCCEEEEeccCCCcCCcCCHHHHHHHHHh
Confidence 44455554433222222 2456676666654456777776666553 356667777765443344566777777776
Q ss_pred hC
Q 038499 262 YG 263 (609)
Q Consensus 262 ~g 263 (609)
.+
T Consensus 213 ~~ 214 (228)
T PRK00685 213 LG 214 (228)
T ss_pred cC
Confidence 33
No 435
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=27.47 E-value=5.4e+02 Score=24.41 Aligned_cols=32 Identities=13% Similarity=-0.008 Sum_probs=23.8
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv 268 (609)
+-.++.++ .+|...++-++++.++++|+.++.
T Consensus 112 ~Dv~I~iS----~SG~t~~~i~~~~~ak~~g~~iI~ 143 (192)
T PRK00414 112 GDVLLGIS----TSGNSGNIIKAIEAARAKGMKVIT 143 (192)
T ss_pred CCEEEEEe----CCCCCHHHHHHHHHHHHCCCeEEE
Confidence 34455565 357777888999999999988764
No 436
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=27.35 E-value=50 Score=37.57 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=31.4
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccc
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~ 272 (609)
..=++++.-|...+++++++.||++|+-||+|-+.
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 44478899999999999999999999999999874
No 437
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=27.01 E-value=3.9e+02 Score=22.67 Aligned_cols=82 Identities=15% Similarity=0.078 Sum_probs=51.0
Q ss_pred EEEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHH
Q 038499 183 VVFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIAR 257 (609)
Q Consensus 183 ~Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~ 257 (609)
..+++..++|... ..++..|.+++.+..+ ...+++.+.+.+ .++.++.+|..... .....+.+.+
T Consensus 3 l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~~----~~~~~~~~~i~~----~~pdiV~iS~~~~~--~~~~~~~~~~ 72 (125)
T cd02065 3 LGATVGGDVHDIGKNIVAIALRDNGFEVIDLGVD----VPPEEIVEAAKE----EDADVVGLSALSTT--HMEAMKLVIE 72 (125)
T ss_pred EEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCCC----CCHHHHHHHHHH----cCCCEEEEecchHh--HHHHHHHHHH
Confidence 3444555555432 2346679999888653 466777777765 57888888753322 2234566677
Q ss_pred HHHHh--CCeEEEeccccC
Q 038499 258 LLHQY--GGFACFDFAASG 274 (609)
Q Consensus 258 la~~~--g~~vivD~A~~~ 274 (609)
+.+++ ++.+++=+.+..
T Consensus 73 ~~~~~p~~~~ivvGG~~~t 91 (125)
T cd02065 73 ALKELGIDIPVVVGGAHPT 91 (125)
T ss_pred HHHhcCCCCeEEEeCCcCC
Confidence 77777 488887776554
No 438
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.91 E-value=5.6e+02 Score=25.82 Aligned_cols=78 Identities=15% Similarity=0.049 Sum_probs=47.0
Q ss_pred EEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh
Q 038499 183 VVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY 262 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~ 262 (609)
++++............+..|.+|..++-..+..-|.+++.+.|.+ .++.++++.+.. .+.+ ..+..++.
T Consensus 34 v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~----~~~d~vV~D~y~------~~~~-~~~~~k~~ 102 (279)
T TIGR03590 34 VAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEE----EKFDILIVDHYG------LDAD-WEKLIKEF 102 (279)
T ss_pred EEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHh----cCCCEEEEcCCC------CCHH-HHHHHHHh
Confidence 566655443333455677899988887544444477788888875 467888888752 1222 33444455
Q ss_pred C-CeEEEecc
Q 038499 263 G-GFACFDFA 271 (609)
Q Consensus 263 g-~~vivD~A 271 (609)
+ .++++|.-
T Consensus 103 ~~~l~~iDD~ 112 (279)
T TIGR03590 103 GRKILVIDDL 112 (279)
T ss_pred CCeEEEEecC
Confidence 5 34556643
No 439
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=26.70 E-value=2.8e+02 Score=27.82 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEecccCcccc---ccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACSNVTGI---YSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~---~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
.+.++++..+++.-...++..+++..=..+. |. +.|+..|.-+ |+.+.++|+|.+|+.
T Consensus 126 ~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsv 186 (258)
T TIGR01362 126 FLSPWDMKNVVEKVLSTGNKNILLCERGTSF-GYNNLVVDMRSLPIM-RELGCPVIFDATHSV 186 (258)
T ss_pred cCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHH-HhcCCCEEEeCCccc
Confidence 4677777666654334467778777666543 44 5788887755 445899999999984
No 440
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.60 E-value=1.4e+02 Score=31.65 Aligned_cols=61 Identities=11% Similarity=-0.083 Sum_probs=42.3
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecccC--ccc--cccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSACSN--VTG--IYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~sn--~TG--~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.++++++.++..-...++..++++..+.+ |+- ...|+..|..+-+.+++.+++|..|+.|.
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGR 300 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcc
Confidence 58888888776543345566655542433 222 22689999988888999999999998773
No 441
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=26.53 E-value=6.6e+02 Score=25.09 Aligned_cols=71 Identities=13% Similarity=-0.038 Sum_probs=42.6
Q ss_pred EEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHH---HHHHhhhccCCCceEEEEecccCccccccCHHHHHHHH
Q 038499 183 VVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEAL---RSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLL 259 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L---~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la 259 (609)
.+++ .|.++..-.+.+|.++..+. .++....+.+| .+.+++ .+.++++...-.+ -+.+-.++
T Consensus 172 ~~v~---~H~af~Y~~~~ygl~~~~~~-~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~-------~~~~~~la 236 (266)
T cd01018 172 AFMV---YHPAWGYFARDYGLTQIPIE-EEGKEPSPADLKRLIDLAKE----KGVRVVFVQPQFS-------TKSAEAIA 236 (266)
T ss_pred eEEE---ECchhHHHHHHcCCEEEecC-CCCCCCCHHHHHHHHHHHHH----cCCCEEEEcCCCC-------cHHHHHHH
Confidence 4554 45666667788999987653 23445545444 455554 4677766653222 24455778
Q ss_pred HHhCCeEEE
Q 038499 260 HQYGGFACF 268 (609)
Q Consensus 260 ~~~g~~viv 268 (609)
++.|+.++.
T Consensus 237 ~~~g~~v~~ 245 (266)
T cd01018 237 REIGAKVVT 245 (266)
T ss_pred HHcCCeEEE
Confidence 888887653
No 442
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=26.01 E-value=2.3e+02 Score=30.14 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=34.5
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|.++ ++..+...+|+ +.+|+++...-.......+.+|++|+.++.
T Consensus 113 ~vV~aSsGN~G~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAMKGY------------------KMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred EEEEeCCchHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45544455554 55555555552 346777776666677788889999998874
No 443
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=25.99 E-value=2e+02 Score=25.60 Aligned_cols=61 Identities=11% Similarity=-0.009 Sum_probs=40.6
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC---CeEEE
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG---GFACF 268 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g---~~viv 268 (609)
++..|.+|+....+ ..++++.++..+ .++.++.+|.-. +....-++++.+.+++.| +.+++
T Consensus 26 l~~~GfeVi~lg~~----~s~e~~v~aa~e----~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 26 YADLGFDVDVGPLF----QTPEEIARQAVE----ADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred HHhCCcEEEECCCC----CCHHHHHHHHHH----cCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 45578899877654 466766555554 577888887644 344445788888888864 45555
No 444
>PRK02991 D-serine dehydratase; Provisional
Probab=25.54 E-value=5.8e+02 Score=27.90 Aligned_cols=51 Identities=16% Similarity=0.176 Sum_probs=35.1
Q ss_pred EEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 142 MIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 142 vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
|+-.++|-.+ ++......+|+ +.+|+++...-..-....+.+|++|+.++-
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~------------------~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~ 211 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGF------------------KVTVHMSADARQWKKDKLRSHGVTVVEYEG 211 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHhCCCEEEEECC
Confidence 5555455443 55555555552 447888887777777788999999998873
No 445
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=24.93 E-value=5.9e+02 Score=26.42 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHhhhcc-CCCceEEEEecccCccccccC-HHHHHHHHHHhCCeEEEecc
Q 038499 215 LLDIEALRSKLELYKD-AKRPILGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~d-l~~I~~la~~~g~~vivD~A 271 (609)
.++.++++..++.... -..-.++++ +.|=|.|.-.+ ..+|.++|++.|+.+++|..
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 5666666665543221 122235555 46677787755 68899999999999999986
No 446
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.93 E-value=3.2e+02 Score=28.64 Aligned_cols=149 Identities=17% Similarity=0.281 Sum_probs=80.8
Q ss_pred cEEEeC---ChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH----HHH-HHcCceEEEEecCC
Q 038499 141 AMIFCG---SGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL----LSW-RQSLAEVVEIGLDD 212 (609)
Q Consensus 141 ~vift~---sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~----~~~-~~~G~~vv~v~~~~ 212 (609)
.++|+| .|-|-.|..++..+ .+.|.+ +++.-..+|-+-. ..| ++.|++++.-+...
T Consensus 141 Vil~vGVNG~GKTTTIaKLA~~l---------------~~~g~~-VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~ 204 (340)
T COG0552 141 VILFVGVNGVGKTTTIAKLAKYL---------------KQQGKS-VLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGA 204 (340)
T ss_pred EEEEEecCCCchHhHHHHHHHHH---------------HHCCCe-EEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCC
Confidence 456664 34444677777766 256665 5555555554321 223 34677777643211
Q ss_pred CC-CCCHHHHHHHHhhhccCCCceEEEEecc---cCccccccCHHHHHHHHHHhC------CeEEEeccccCCccc--cc
Q 038499 213 DG-LLDIEALRSKLELYKDAKRPILGSFSAC---SNVTGIYSDTRSIARLLHQYG------GFACFDFAASGPYVE--ID 280 (609)
Q Consensus 213 ~g-~ld~e~L~~al~~~~~~~~~~lv~~s~~---sn~TG~~~dl~~I~~la~~~g------~~vivD~A~~~~~~~--id 280 (609)
|- .+-.++++.+.. .+..++++... +|-+.....++.|.+++++.- ++++.|+..+--.+. --
T Consensus 205 DpAaVafDAi~~Aka-----r~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~ 279 (340)
T COG0552 205 DPAAVAFDAIQAAKA-----RGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI 279 (340)
T ss_pred CcHHHHHHHHHHHHH-----cCCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHH
Confidence 11 133355666655 45667777654 344455566888888888753 778889874311000 00
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEE-Eechh
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILL-MTKAL 315 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~-~~~~~ 315 (609)
+++ .-++|-++.+ |.=|...| |+++ +...+
T Consensus 280 F~e--av~l~GiIlT--KlDgtAKG-G~il~I~~~l 310 (340)
T COG0552 280 FNE--AVGLDGIILT--KLDGTAKG-GIILSIAYEL 310 (340)
T ss_pred HHH--hcCCceEEEE--ecccCCCc-ceeeeHHHHh
Confidence 111 1145666665 76676665 5444 44544
No 447
>PLN02565 cysteine synthase
Probab=24.19 E-value=3e+02 Score=28.66 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=36.4
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|.++ ++..+.+.+|+ +.+|+++...-......++..|++|+.++.
T Consensus 69 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 69 VLIEPTSGNTGIGLAFMAAAKGY------------------KLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEEECCChHHHHHHHHHHHcCC------------------eEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 35555466555 66666666652 336888887777777888999999998764
No 448
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=24.10 E-value=6.5e+02 Score=24.19 Aligned_cols=111 Identities=13% Similarity=0.179 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
++.+++.+.+.+|.+...++++.|-|-.+ .++.-+. . .+..+-..+..-+.+ +. ..|
T Consensus 68 V~~L~~ff~~~Lg~~~~tnviiVG~GnlG---~All~Y~--f-----------~~~~~~~iv~~FDv~-~~------~VG 124 (211)
T COG2344 68 VKYLRDFFDDLLGQDKTTNVIIVGVGNLG---RALLNYN--F-----------SKKNGMKIVAAFDVD-PD------KVG 124 (211)
T ss_pred HHHHHHHHHHHhCCCcceeEEEEccChHH---HHHhcCc--c-----------hhhcCceEEEEecCC-HH------HhC
Confidence 56678888999999877788888766443 2111111 0 011111122221211 11 235
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 203 AEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 203 ~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
-++..+++. ++++|+..+++ ....+.+++-|. .--+++++.+-+.|+.-|+.++
T Consensus 125 ~~~~~v~V~-----~~d~le~~v~~----~dv~iaiLtVPa------~~AQ~vad~Lv~aGVkGIlNFt 178 (211)
T COG2344 125 TKIGDVPVY-----DLDDLEKFVKK----NDVEIAILTVPA------EHAQEVADRLVKAGVKGILNFT 178 (211)
T ss_pred cccCCeeee-----chHHHHHHHHh----cCccEEEEEccH------HHHHHHHHHHHHcCCceEEecc
Confidence 555555553 78999999986 456666666543 1256788888889999888887
No 449
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=24.05 E-value=1.5e+02 Score=29.74 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=22.6
Q ss_pred ccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 247 GIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 247 G~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
|-..+.+++.++.+++++-+++|++|=
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred cCcCCHHHHHHHHHHcCCCEEEECCCh
Confidence 334567899999999999999999863
No 450
>PRK04296 thymidine kinase; Provisional
Probab=23.99 E-value=5.2e+02 Score=24.31 Aligned_cols=38 Identities=8% Similarity=-0.087 Sum_probs=23.1
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
+++.+|++.-.+..+- ..+.++.+.++..|+.+++=+-
T Consensus 77 ~~~dvviIDEaq~l~~--~~v~~l~~~l~~~g~~vi~tgl 114 (190)
T PRK04296 77 EKIDCVLIDEAQFLDK--EQVVQLAEVLDDLGIPVICYGL 114 (190)
T ss_pred CCCCEEEEEccccCCH--HHHHHHHHHHHHcCCeEEEEec
Confidence 4667888888743210 1145566666778887776543
No 451
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=23.43 E-value=2.7e+02 Score=27.07 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=49.9
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH---hCC--eEEEeccccCCcccccCCCCCCCCc
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ---YGG--FACFDFAASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~---~g~--~vivD~A~~~~~~~id~~~~~~~~~ 289 (609)
...+++|.++|++...+++.+.|++. .+++.|...+.++|.+..++ .+. +.++|.+.++++. +. ..+
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~-~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~---la----saa 99 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLD-LDGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYY---LA----SAA 99 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhh---hh----hhC
Confidence 45678888888765555678888886 46688888888887766543 343 4456654433322 11 146
Q ss_pred cEEEEcCCCCCC
Q 038499 290 DAIFLSTHKFLG 301 (609)
Q Consensus 290 D~v~~S~hK~lg 301 (609)
|-++.+++=.+|
T Consensus 100 d~I~a~p~~~vg 111 (222)
T cd07018 100 DEIYLNPSGSVE 111 (222)
T ss_pred CEEEECCCceEE
Confidence 777877765554
No 452
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=23.14 E-value=2.5e+02 Score=21.20 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEE
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFAC 267 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vi 267 (609)
++.+.++++.+...+ .....+.++--+|..|. .++.++++++|+.++
T Consensus 12 ~~~~~~~~~~~~a~~----~g~~~v~iTDh~~~~~~----~~~~~~~~~~gi~~i 58 (67)
T smart00481 12 DGALSPEELVKRAKE----LGLKAIAITDHGNLFGA----VEFYKAAKKAGIKPI 58 (67)
T ss_pred cccCCHHHHHHHHHH----cCCCEEEEeeCCcccCH----HHHHHHHHHcCCeEE
Confidence 455677777776664 46677777766665554 466677777776654
No 453
>PRK05973 replicative DNA helicase; Provisional
Probab=22.94 E-value=5.6e+02 Score=25.41 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=28.1
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecccCccccccC------HHHHHHHHHHhCCeEE
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD------TRSIARLLHQYGGFAC 267 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d------l~~I~~la~~~g~~vi 267 (609)
+..+.+.+.+... .++.+|+|.+.+.......+ +..|..+++++|+.++
T Consensus 133 ~~~~~ii~~l~~~---~~~~lVVIDsLq~l~~~~~~~el~~~~~~Lk~~Ak~~gitvI 187 (237)
T PRK05973 133 ICADYIIARLASA---PRGTLVVIDYLQLLDQRREKPDLSVQVRALKSFARERGLIIV 187 (237)
T ss_pred CCHHHHHHHHHHh---hCCCEEEEEcHHHHhhcccchhHHHHHHHHHHHHHhCCCeEE
Confidence 3445444444321 35678888887766443322 2336678888888655
No 454
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=22.71 E-value=7.9e+02 Score=24.93 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=35.4
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD 211 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~ 211 (609)
.|+-.++|..+ ++..+...+|+ +..|+++...-.......+..|++|+.++-+
T Consensus 59 ~vv~aSsGN~g~alA~~a~~~Gl------------------~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 59 TIVEPTSGNTGIALAMVAAARGY------------------KLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred EEEEeCCChhHHHHHHHHHHcCC------------------eEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 45554445444 55555555552 3478888776677777788899999988743
No 455
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=22.52 E-value=6.6e+02 Score=26.72 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=45.2
Q ss_pred EEEECCCCccchH-HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcc--------ccccCH-
Q 038499 183 VVFVGPHEHHSNL-LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVT--------GIYSDT- 252 (609)
Q Consensus 183 ~Vlv~~~~h~s~~-~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T--------G~~~dl- 252 (609)
+++++..+..... .-+...|.....+.+. ...+++.+.+.+.+ .+++++++...++.. |.+..+
T Consensus 113 VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~--~e~~le~I~~~i~~----~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr 186 (372)
T cd01121 113 VLYVSGEESPEQIKLRADRLGISTENLYLL--AETNLEDILASIEE----LKPDLVIIDSIQTVYSSELTSAPGSVSQVR 186 (372)
T ss_pred EEEEECCcCHHHHHHHHHHcCCCcccEEEE--ccCcHHHHHHHHHh----cCCcEEEEcchHHhhccccccCCCCHHHHH
Confidence 5666554433322 1233445432222211 12468888888875 578899999887653 222222
Q ss_pred ---HHHHHHHHHhCCeEEE
Q 038499 253 ---RSIARLLHQYGGFACF 268 (609)
Q Consensus 253 ---~~I~~la~~~g~~viv 268 (609)
..+.++++++|+.+++
T Consensus 187 ~~~~~L~~lak~~~itvil 205 (372)
T cd01121 187 ECTAELMRFAKERNIPIFI 205 (372)
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 3477889999986543
No 456
>PRK05638 threonine synthase; Validated
Probab=22.38 E-value=4.2e+02 Score=28.89 Aligned_cols=51 Identities=18% Similarity=0.268 Sum_probs=33.8
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEe
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIG 209 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~ 209 (609)
.|+..++|-++ ++......+| =+..|+++...-.......+..|++|+.++
T Consensus 114 ~vv~aSsGN~g~alA~~aa~~G------------------~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 114 GFIVASDGNAAASVAAYSARAG------------------KEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEEeCCChHHHHHHHHHHHcC------------------CCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 45555455444 5555555444 244788887766666777888999999996
No 457
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=22.28 E-value=5e+02 Score=23.67 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=31.5
Q ss_pred HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCe
Q 038499 200 QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGF 265 (609)
Q Consensus 200 ~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~ 265 (609)
..+++++.... .|++.+.+++. + ...++.+.+.+.. .....+.+.+.|+++|+.
T Consensus 38 ~~~~~~~~~d~-----~d~~~~~~al~-----~-~d~vi~~~~~~~~-~~~~~~~~~~a~~~~~~~ 91 (183)
T PF13460_consen 38 SPGVEIIQGDL-----FDPDSVKAALK-----G-ADAVIHAAGPPPK-DVDAAKNIIEAAKKAGVK 91 (183)
T ss_dssp CTTEEEEESCT-----TCHHHHHHHHT-----T-SSEEEECCHSTTT-HHHHHHHHHHHHHHTTSS
T ss_pred ccccccceeee-----hhhhhhhhhhh-----h-cchhhhhhhhhcc-cccccccccccccccccc
Confidence 44555554443 38899999998 2 3344444433332 233456677888887653
No 458
>PRK07476 eutB threonine dehydratase; Provisional
Probab=22.12 E-value=3.7e+02 Score=27.82 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=34.5
Q ss_pred EEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 142 MIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 142 vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
|+-.++|-.+ ++..+...+|+ +.+|+++...-......++.+|++|+.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~------------------~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVTASTGNHGRALAYAARALGI------------------RATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHhCC------------------CEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 5444445444 56666665552 336888777767777788899999998874
No 459
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=21.98 E-value=4e+02 Score=24.74 Aligned_cols=106 Identities=23% Similarity=0.150 Sum_probs=53.6
Q ss_pred EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHHcCceEEEEecCC---CCCCCHH
Q 038499 144 FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQSLAEVVEIGLDD---DGLLDIE 219 (609)
Q Consensus 144 ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~G~~vv~v~~~~---~g~ld~e 219 (609)
|.|+|=|..|+.++. . ...+.++.|++.+...-..-.. ++..|..++.+.-.. +..-|+.
T Consensus 8 fLGsGKTTli~~ll~-~---------------~~~~~~~~vI~ne~g~~~iD~~~l~~~~~~v~~l~~gcicc~~~~~~~ 71 (178)
T PF02492_consen 8 FLGSGKTTLINHLLK-R---------------NRQGERVAVIVNEFGEVNIDAELLQEDGVPVVELNNGCICCTLRDDLV 71 (178)
T ss_dssp STTSSHHHHHHHHHH-H---------------HTTTS-EEEEECSTTSTHHHHHHHHTTT-EEEEECTTTESS-TTS-HH
T ss_pred CCCCCHHHHHHHHHH-H---------------hcCCceeEEEEccccccccchhhhcccceEEEEecCCCcccccHHHHH
Confidence 557898888888875 2 2567777777766554443322 445677877775322 1122333
Q ss_pred -HHHHHHhhhccCC--CceEEEEecccCccccccCHHH------HHHHHHHhCCeEEEecccc
Q 038499 220 -ALRSKLELYKDAK--RPILGSFSACSNVTGIYSDTRS------IARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 220 -~L~~al~~~~~~~--~~~lv~~s~~sn~TG~~~dl~~------I~~la~~~g~~vivD~A~~ 273 (609)
.+.+.+.. . ++..+++. ++|...|..= +.+.++-..+..++|+...
T Consensus 72 ~~l~~l~~~----~~~~~d~IiIE----~sG~a~p~~l~~~~~~~~~~~~~~~iI~vVDa~~~ 126 (178)
T PF02492_consen 72 EALRRLLRE----YEERPDRIIIE----TSGLADPAPLILQDPPLKEDFRLDSIITVVDATNF 126 (178)
T ss_dssp HHHHHHCCC----CHGC-SEEEEE----EECSSGGGGHHHHSHHHHHHESESEEEEEEEGTTH
T ss_pred HHHHHHHHh----cCCCcCEEEEC----CccccccchhhhccccccccccccceeEEeccccc
Confidence 33333332 3 56666665 3453333211 1111112357788898654
No 460
>PRK08638 threonine dehydratase; Validated
Probab=21.42 E-value=3.3e+02 Score=28.41 Aligned_cols=51 Identities=24% Similarity=0.249 Sum_probs=34.8
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEe
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIG 209 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~ 209 (609)
.|+-.++|.++ ++......+|+ +..|+++...........+..|++|+.++
T Consensus 77 ~vv~~SsGN~g~alA~~aa~~G~------------------~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 77 GVVACSAGNHAQGVALSCALLGI------------------DGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred eEEEeCCcHHHHHHHHHHHHcCC------------------CEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 46655566554 55555555542 34788887777777778889999999885
No 461
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.62 E-value=8.9e+02 Score=24.49 Aligned_cols=70 Identities=10% Similarity=-0.113 Sum_probs=41.7
Q ss_pred CccchHHHHHHcCceEEEE-ecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEE
Q 038499 190 EHHSNLLSWRQSLAEVVEI-GLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFAC 267 (609)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v-~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vi 267 (609)
.|++...-++.+|.+++.+ ....+....+.+|.+.++.-+ ..+.++|+..... +-+.+..++++.|+.++
T Consensus 185 ~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik-~~~v~~If~e~~~-------~~~~~~~ia~~~g~~v~ 255 (286)
T cd01019 185 FHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIK-EKGATCVFAEPQF-------HPKIAETLAEGTGAKVG 255 (286)
T ss_pred ecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHH-HcCCcEEEecCCC-------ChHHHHHHHHhcCceEE
Confidence 5566666778889987654 334456677776665554211 1567776654332 23556667777786553
No 462
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=20.60 E-value=2.5e+02 Score=27.36 Aligned_cols=55 Identities=16% Similarity=0.104 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHhhhccCCCceEEEEecccCccccc--cC--------HHHHHHHHHHhCCeEEE
Q 038499 214 GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY--SD--------TRSIARLLHQYGGFACF 268 (609)
Q Consensus 214 g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~--~d--------l~~I~~la~~~g~~viv 268 (609)
+.+++++|++.+.......++++|++.+.+.....- .+ +..|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 346788888777654333478899998887642111 11 34577788899987665
No 463
>PLN00011 cysteine synthase
Probab=20.29 E-value=7.7e+02 Score=25.47 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=35.6
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|..+ ++..+...+|+ +..|+++...-.......+..|++|+.++.
T Consensus 71 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 71 TLIEATAGNTGIGLACIGAARGY------------------KVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEEeCCChHHHHHHHHHHHcCC------------------eEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 56555455554 55555555552 336888877666777888899999998874
No 464
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=20.19 E-value=3.4e+02 Score=27.62 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=33.1
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-+++|-++ ++..+...+|+ +.+|+++...-......++..|++|+.++.
T Consensus 67 ~iv~~ssGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 67 GVVAASAGNHAQGVAYAAKLLGI------------------PATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred cEEEECCCHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45554455444 55555555542 336777766555566677889999999975
No 465
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=20.02 E-value=4.3e+02 Score=24.02 Aligned_cols=76 Identities=20% Similarity=0.123 Sum_probs=47.9
Q ss_pred CCceEEEECCCCccc-------hHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC
Q 038499 179 EERWVVFVGPHEHHS-------NLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD 251 (609)
Q Consensus 179 gd~~~Vlv~~~~h~s-------~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d 251 (609)
|.++.|++...---+ ....++..|++|+..+..... -|.++++++ ....++.+|.- --|-...
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp---~e~v~aA~~-----~dv~vIgvSsl--~g~h~~l 79 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTP---EEAVRAAVE-----EDVDVIGVSSL--DGGHLTL 79 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCH---HHHHHHHHh-----cCCCEEEEEec--cchHHHH
Confidence 556677775543222 123456689999988765321 355566666 45666666543 2345567
Q ss_pred HHHHHHHHHHhCC
Q 038499 252 TRSIARLLHQYGG 264 (609)
Q Consensus 252 l~~I~~la~~~g~ 264 (609)
.+.+.+.|+++|+
T Consensus 80 ~~~lve~lre~G~ 92 (143)
T COG2185 80 VPGLVEALREAGV 92 (143)
T ss_pred HHHHHHHHHHhCC
Confidence 8899999999875
No 466
>PF04459 DUF512: Protein of unknown function (DUF512); InterPro: IPR007549 This is a domain of uncharacterised prokaryotic proteins. It is often found C-terminal to the radical SAM domain (IPR007197 from INTERPRO).
Probab=20.01 E-value=3e+02 Score=26.62 Aligned_cols=52 Identities=17% Similarity=0.129 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHhhhccCCCceEEEEecccC--ccccccCHHHHHHHHHHhCCeEEE
Q 038499 214 GLLDIEALRSKLELYKDAKRPILGSFSACSN--VTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 214 g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn--~TG~~~dl~~I~~la~~~g~~viv 268 (609)
|.+.-.++.++|+.. .....++++...- -.+...|-..+.++.++.|+.+++
T Consensus 145 GLLTg~Dii~~L~~~---~~~d~lllP~~ml~~~~~~fLDD~t~~el~~~lg~~v~v 198 (204)
T PF04459_consen 145 GLLTGQDIIEQLKGK---ELGDLLLLPDVMLRHGEGVFLDDMTLEELEERLGVPVIV 198 (204)
T ss_pred eCccHHHHHHHhCcC---CCCCEEEECHHHhcCCCCccCCCCcHHHHHHHhCCcEEE
Confidence 678889999999742 2234556654432 256667766788888888887653
Done!