Query 038499
Match_columns 609
No_of_seqs 419 out of 3030
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 20:17:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hvk_A Probable cysteine desul 100.0 6.6E-39 2.3E-43 338.7 38.8 372 78-533 1-381 (382)
2 3lvm_A Cysteine desulfurase; s 100.0 4.9E-38 1.7E-42 338.1 43.0 386 76-544 21-423 (423)
3 1kmj_A Selenocysteine lyase; p 100.0 2.7E-37 9.3E-42 329.6 41.0 393 55-524 5-404 (406)
4 4eb5_A Probable cysteine desul 100.0 1.7E-37 5.8E-42 328.6 38.6 371 78-533 1-381 (382)
5 1t3i_A Probable cysteine desul 100.0 3.3E-36 1.1E-40 322.9 41.9 399 52-526 7-414 (420)
6 3cai_A Possible aminotransfera 100.0 5.2E-37 1.8E-41 328.3 35.4 369 55-521 13-405 (406)
7 1eg5_A Aminotransferase; PLP-d 100.0 9.7E-35 3.3E-39 307.4 42.6 364 79-525 3-376 (384)
8 3e77_A Phosphoserine aminotran 100.0 2.2E-36 7.4E-41 319.2 26.8 351 78-524 13-374 (377)
9 3vax_A Putative uncharacterize 100.0 4.8E-36 1.7E-40 319.9 29.8 368 72-523 15-398 (400)
10 3e9k_A Kynureninase; kynurenin 100.0 2.7E-36 9.1E-41 329.4 26.7 393 55-525 39-461 (465)
11 1elu_A L-cysteine/L-cystine C- 100.0 1.5E-34 5.2E-39 306.8 36.7 371 55-521 4-388 (390)
12 3qm2_A Phosphoserine aminotran 100.0 1.4E-36 4.8E-41 322.3 17.0 347 78-524 27-384 (386)
13 2dr1_A PH1308 protein, 386AA l 100.0 5.4E-34 1.8E-38 302.2 33.8 365 56-524 8-378 (386)
14 2z9v_A Aspartate aminotransfer 100.0 6.2E-34 2.1E-38 302.7 32.0 357 77-525 8-371 (392)
15 1qz9_A Kynureninase; kynurenin 100.0 1.1E-33 3.6E-38 303.5 32.2 372 53-526 14-403 (416)
16 3a9z_A Selenocysteine lyase; P 100.0 4.2E-33 1.5E-37 300.6 34.9 373 77-525 18-428 (432)
17 2huf_A Alanine glyoxylate amin 100.0 6.8E-33 2.3E-37 294.8 33.6 355 77-526 18-384 (393)
18 2ch1_A 3-hydroxykynurenine tra 100.0 4.1E-33 1.4E-37 296.8 31.6 367 78-539 18-394 (396)
19 3m5u_A Phosphoserine aminotran 100.0 1E-33 3.5E-38 297.7 25.7 345 79-524 6-359 (361)
20 1vjo_A Alanine--glyoxylate ami 100.0 8.4E-33 2.9E-37 294.3 30.6 347 77-522 33-392 (393)
21 3nnk_A Ureidoglycine-glyoxylat 100.0 1.9E-32 6.5E-37 292.9 33.2 364 79-526 14-391 (411)
22 1iug_A Putative aspartate amin 100.0 4.2E-32 1.4E-36 283.9 31.9 340 80-525 3-348 (352)
23 3ffr_A Phosphoserine aminotran 100.0 9.2E-33 3.2E-37 289.8 26.8 352 80-522 6-361 (362)
24 3zrp_A Serine-pyruvate aminotr 100.0 1.8E-32 6.2E-37 290.0 29.1 346 85-526 9-364 (384)
25 3kgw_A Alanine-glyoxylate amin 100.0 3.3E-32 1.1E-36 288.8 30.9 361 80-526 25-389 (393)
26 3isl_A Purine catabolism prote 100.0 6.5E-32 2.2E-36 289.2 31.8 331 117-525 40-390 (416)
27 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.5E-32 1.2E-36 286.8 26.6 352 76-524 7-369 (371)
28 3f0h_A Aminotransferase; RER07 100.0 4E-31 1.4E-35 279.4 32.4 345 84-525 25-374 (376)
29 2yrr_A Aminotransferase, class 100.0 2.2E-31 7.4E-36 278.2 28.4 343 82-524 4-352 (353)
30 3f9t_A TDC, L-tyrosine decarbo 100.0 3E-30 1E-34 273.7 37.1 371 46-523 7-396 (397)
31 2jis_A Cysteine sulfinic acid 100.0 8.3E-31 2.9E-35 289.7 34.1 399 48-524 86-514 (515)
32 2qma_A Diaminobutyrate-pyruvat 100.0 3E-30 1E-34 284.0 36.8 397 46-524 75-495 (497)
33 2dgk_A GAD-beta, GADB, glutama 100.0 2.7E-29 9.4E-34 273.0 41.1 391 49-532 23-441 (452)
34 1m32_A 2-aminoethylphosphonate 100.0 4.3E-30 1.5E-34 269.7 32.9 319 121-523 37-363 (366)
35 2okj_A Glutamate decarboxylase 100.0 2.1E-29 7E-34 277.8 39.5 415 45-524 67-501 (504)
36 2c0r_A PSAT, phosphoserine ami 100.0 2.7E-30 9.2E-35 272.1 30.1 344 78-524 4-360 (362)
37 3hbx_A GAD 1, glutamate decarb 100.0 1.9E-28 6.3E-33 269.9 42.9 382 51-527 39-446 (502)
38 2z67_A O-phosphoseryl-tRNA(SEC 100.0 2.5E-31 8.4E-36 289.5 18.9 362 52-521 65-454 (456)
39 3k40_A Aromatic-L-amino-acid d 100.0 2.6E-29 9E-34 274.8 34.4 405 44-525 46-471 (475)
40 2bkw_A Alanine-glyoxylate amin 100.0 1.5E-29 5.3E-34 267.7 31.1 320 120-524 37-383 (385)
41 3vp6_A Glutamate decarboxylase 100.0 2.3E-28 7.8E-33 269.7 40.6 427 43-526 68-506 (511)
42 1w23_A Phosphoserine aminotran 100.0 5.7E-30 2E-34 268.9 25.9 344 79-524 4-359 (360)
43 4e1o_A HDC, histidine decarbox 100.0 2.1E-28 7.3E-33 268.1 37.3 408 44-525 51-478 (481)
44 1js3_A DDC;, DOPA decarboxylas 100.0 4.3E-28 1.5E-32 266.0 38.0 399 45-525 47-474 (486)
45 3ke3_A Putative serine-pyruvat 100.0 2E-29 6.8E-34 267.7 23.2 333 103-525 19-376 (379)
46 3ffh_A Histidinol-phosphate am 100.0 3.6E-28 1.2E-32 255.8 32.3 324 76-521 32-362 (363)
47 1rv3_A Serine hydroxymethyltra 100.0 2.6E-29 8.8E-34 275.5 23.1 361 78-524 46-430 (483)
48 3mc6_A Sphingosine-1-phosphate 100.0 3.4E-28 1.2E-32 267.5 31.4 336 91-526 78-438 (497)
49 3mad_A Sphingosine-1-phosphate 100.0 1.1E-27 3.7E-32 264.7 33.1 315 116-526 134-470 (514)
50 1wyu_A Glycine dehydrogenase ( 100.0 1.3E-28 4.3E-33 266.7 24.3 315 115-522 102-437 (438)
51 3ly1_A Putative histidinol-pho 100.0 8.1E-28 2.8E-32 252.1 29.5 334 69-525 10-352 (354)
52 3get_A Histidinol-phosphate am 100.0 5.9E-28 2E-32 254.3 28.4 323 76-522 30-364 (365)
53 3euc_A Histidinol-phosphate am 100.0 1.5E-27 5E-32 251.5 31.1 327 76-523 30-366 (367)
54 3dzz_A Putative pyridoxal 5'-p 100.0 9.9E-28 3.4E-32 254.6 29.6 353 67-525 19-389 (391)
55 1svv_A Threonine aldolase; str 100.0 2.2E-28 7.5E-33 256.2 22.4 333 77-524 14-357 (359)
56 4dq6_A Putative pyridoxal phos 100.0 8.2E-28 2.8E-32 255.1 26.9 339 77-522 33-390 (391)
57 3nra_A Aspartate aminotransfer 100.0 3.5E-28 1.2E-32 259.7 23.2 346 77-525 40-405 (407)
58 3kax_A Aminotransferase, class 100.0 1.1E-27 3.7E-32 253.5 26.6 351 65-522 13-382 (383)
59 2fyf_A PSAT, phosphoserine ami 100.0 8.4E-28 2.9E-32 256.7 24.8 349 70-524 32-397 (398)
60 2bwn_A 5-aminolevulinate synth 100.0 5.6E-28 1.9E-32 257.9 23.4 344 78-524 49-399 (401)
61 1fc4_A 2-amino-3-ketobutyrate 100.0 1.7E-27 5.8E-32 254.1 26.6 336 79-525 46-397 (401)
62 3tqx_A 2-amino-3-ketobutyrate 100.0 1.7E-27 5.7E-32 253.5 25.7 341 79-525 44-396 (399)
63 3p1t_A Putative histidinol-pho 100.0 4.8E-27 1.7E-31 244.2 28.6 316 76-523 16-335 (337)
64 1j32_A Aspartate aminotransfer 100.0 3.8E-27 1.3E-31 250.3 28.3 341 77-524 31-386 (388)
65 2w8t_A SPT, serine palmitoyltr 100.0 1.6E-26 5.6E-31 249.2 32.8 336 80-526 66-416 (427)
66 1bw0_A TAT, protein (tyrosine 100.0 1.6E-26 5.5E-31 247.9 30.8 346 76-525 33-413 (416)
67 3ftb_A Histidinol-phosphate am 100.0 1.2E-26 4E-31 243.7 28.7 324 77-524 27-360 (361)
68 3a2b_A Serine palmitoyltransfe 100.0 8.9E-27 3.1E-31 248.4 27.4 328 89-525 58-392 (398)
69 1o4s_A Aspartate aminotransfer 100.0 4.8E-27 1.6E-31 250.0 25.0 333 77-523 42-387 (389)
70 2fnu_A Aminotransferase; prote 100.0 3.1E-26 1.1E-30 241.6 30.9 351 86-525 8-372 (375)
71 1gd9_A Aspartate aminotransfer 100.0 1.1E-26 3.8E-31 246.7 26.6 343 77-524 27-385 (389)
72 3dyd_A Tyrosine aminotransfera 100.0 2.8E-26 9.4E-31 247.4 29.6 346 76-526 54-425 (427)
73 3g0t_A Putative aminotransfera 100.0 6.8E-26 2.3E-30 244.5 31.9 356 77-524 45-436 (437)
74 1xi9_A Putative transaminase; 99.9 1.4E-26 4.8E-31 247.8 26.0 342 77-525 39-403 (406)
75 2vi8_A Serine hydroxymethyltra 99.9 6.6E-27 2.2E-31 249.6 23.3 346 80-524 26-386 (405)
76 2zyj_A Alpha-aminodipate amino 99.9 8.7E-27 3E-31 248.5 23.5 342 77-525 33-393 (397)
77 1wyu_B Glycine dehydrogenase s 99.9 4.9E-26 1.7E-30 248.9 29.8 361 77-524 67-440 (474)
78 3hdo_A Histidinol-phosphate am 99.9 2.1E-26 7.1E-31 242.3 25.9 321 76-524 26-354 (360)
79 2zc0_A Alanine glyoxylate tran 99.9 3.9E-26 1.3E-30 244.0 28.1 336 89-525 50-404 (407)
80 3frk_A QDTB; aminotransferase, 99.9 7.1E-27 2.4E-31 247.0 22.0 321 121-523 36-366 (373)
81 3kki_A CAI-1 autoinducer synth 99.9 1.4E-25 4.7E-30 240.3 32.0 347 65-524 49-403 (409)
82 1v2d_A Glutamine aminotransfer 99.9 1.2E-26 4E-31 246.0 23.4 333 78-526 27-372 (381)
83 1c7n_A Cystalysin; transferase 99.9 2.3E-26 8E-31 245.1 25.4 344 77-525 32-393 (399)
84 1b5p_A Protein (aspartate amin 99.9 3E-26 1E-30 243.5 25.8 338 77-522 32-382 (385)
85 1bs0_A Protein (8-amino-7-oxon 99.9 5.8E-26 2E-30 240.7 27.7 333 78-521 39-383 (384)
86 1u08_A Hypothetical aminotrans 99.9 3.2E-26 1.1E-30 243.1 25.7 341 77-520 31-385 (386)
87 2x5d_A Probable aminotransfera 99.9 4.2E-26 1.4E-30 244.5 26.9 347 77-533 38-406 (412)
88 3l8a_A METC, putative aminotra 99.9 2.7E-26 9.2E-31 246.9 24.2 331 87-523 73-420 (421)
89 1v72_A Aldolase; PLP-dependent 99.9 9.9E-27 3.4E-31 243.4 20.3 331 77-524 8-352 (356)
90 2cb1_A O-acetyl homoserine sul 99.9 9.7E-26 3.3E-30 242.1 28.4 354 77-520 22-411 (412)
91 1d2f_A MALY protein; aminotran 99.9 9.3E-26 3.2E-30 239.8 27.9 344 76-524 28-388 (390)
92 2z61_A Probable aspartate amin 99.9 3.7E-26 1.3E-30 241.2 24.4 326 77-523 30-369 (370)
93 1lc5_A COBD, L-threonine-O-3-p 99.9 1.1E-25 3.8E-30 237.1 28.0 326 77-524 25-359 (364)
94 1yiz_A Kynurenine aminotransfe 99.9 7.7E-26 2.6E-30 243.7 27.1 360 77-523 38-427 (429)
95 2o0r_A RV0858C (N-succinyldiam 99.9 2.8E-26 9.7E-31 245.7 23.5 351 77-524 26-395 (411)
96 3cq5_A Histidinol-phosphate am 99.9 3.7E-25 1.3E-29 233.6 31.6 328 79-523 33-366 (369)
97 1o69_A Aminotransferase; struc 99.9 2.3E-25 7.8E-30 237.6 30.3 364 91-525 12-387 (394)
98 2rfv_A Methionine gamma-lyase; 99.9 3.1E-26 1.1E-30 244.6 23.6 198 77-315 26-229 (398)
99 3fdb_A Beta C-S lyase, putativ 99.9 2.4E-26 8.2E-31 242.8 22.3 348 66-524 14-375 (377)
100 3h14_A Aminotransferase, class 99.9 1.3E-25 4.4E-30 238.8 27.6 338 77-524 32-381 (391)
101 3uwc_A Nucleotide-sugar aminot 99.9 2.4E-26 8.3E-31 242.6 21.7 350 81-524 9-370 (374)
102 2c81_A Glutamine-2-deoxy-scyll 99.9 1.1E-25 3.8E-30 241.8 26.5 373 88-525 13-414 (418)
103 1gc0_A Methionine gamma-lyase; 99.9 9.1E-26 3.1E-30 241.1 25.6 341 78-521 28-397 (398)
104 1b9h_A AHBA synthase, protein 99.9 1.2E-25 4E-30 238.9 26.3 346 90-524 16-387 (388)
105 2o1b_A Aminotransferase, class 99.9 2.8E-26 9.6E-31 245.5 21.6 338 77-524 48-402 (404)
106 1pff_A Methionine gamma-lyase; 99.9 2.6E-26 9E-31 238.5 20.6 299 125-521 2-330 (331)
107 3ele_A Amino transferase; RER0 99.9 1.6E-25 5.3E-30 238.6 26.8 341 77-525 36-396 (398)
108 2dkj_A Serine hydroxymethyltra 99.9 4.1E-26 1.4E-30 243.6 21.3 339 87-524 33-387 (407)
109 3fvs_A Kynurenine--oxoglutarat 99.9 1.8E-25 6.1E-30 240.1 26.4 361 77-524 29-421 (422)
110 3b8x_A WBDK, pyridoxamine 5-ph 99.9 7.9E-25 2.7E-29 232.9 31.0 356 88-518 12-389 (390)
111 1mdo_A ARNB aminotransferase; 99.9 5.8E-25 2E-29 233.7 29.6 349 89-525 18-386 (393)
112 2dou_A Probable N-succinyldiam 99.9 1.7E-25 5.8E-30 236.6 24.6 333 78-522 27-375 (376)
113 3aow_A Putative uncharacterize 99.9 3E-25 1E-29 240.9 26.5 334 89-525 92-445 (448)
114 3e2y_A Kynurenine-oxoglutarate 99.9 7.9E-26 2.7E-30 241.7 21.6 357 77-520 24-408 (410)
115 3jtx_A Aminotransferase; NP_28 99.9 7.5E-25 2.6E-29 233.0 29.1 344 77-522 31-395 (396)
116 1iay_A ACC synthase 2, 1-amino 99.9 2.8E-25 9.7E-30 239.2 25.9 356 76-524 36-426 (428)
117 3dr4_A Putative perosamine syn 99.9 1E-25 3.6E-30 239.6 22.0 346 89-521 34-389 (391)
118 2gb3_A Aspartate aminotransfer 99.9 2.1E-25 7.2E-30 238.9 24.2 334 77-525 44-402 (409)
119 1fg7_A Histidinol phosphate am 99.9 7E-25 2.4E-29 230.6 27.3 286 123-521 60-354 (356)
120 1qgn_A Protein (cystathionine 99.9 7.7E-25 2.6E-29 236.7 28.1 313 115-524 108-444 (445)
121 1vp4_A Aminotransferase, putat 99.9 1.2E-25 4.2E-30 242.1 21.4 334 89-525 59-418 (425)
122 3op7_A Aminotransferase class 99.9 5.9E-25 2E-29 232.2 25.6 298 123-525 65-371 (375)
123 3piu_A 1-aminocyclopropane-1-c 99.9 8.3E-25 2.8E-29 236.2 27.0 361 77-526 39-433 (435)
124 3ezs_A Aminotransferase ASPB; 99.9 6.2E-25 2.1E-29 232.0 25.4 332 78-524 25-374 (376)
125 3n0l_A Serine hydroxymethyltra 99.9 8E-25 2.8E-29 234.3 25.8 343 87-525 35-389 (417)
126 3qgu_A LL-diaminopimelate amin 99.9 1.4E-24 4.9E-29 235.2 27.2 344 77-524 70-439 (449)
127 3fkd_A L-threonine-O-3-phospha 99.9 2.7E-24 9.1E-29 225.1 27.3 319 77-524 16-341 (350)
128 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.5E-25 5.1E-30 243.1 18.2 283 121-525 57-353 (446)
129 2r2n_A Kynurenine/alpha-aminoa 99.9 3.5E-24 1.2E-28 230.7 28.7 313 120-524 81-423 (425)
130 3if2_A Aminotransferase; YP_26 99.9 1.9E-25 6.4E-30 241.8 18.7 358 77-525 32-440 (444)
131 3gbx_A Serine hydroxymethyltra 99.9 6.8E-25 2.3E-29 234.9 22.7 342 87-525 40-396 (420)
132 1cs1_A CGS, protein (cystathio 99.9 3.2E-24 1.1E-28 228.0 27.7 304 120-522 51-384 (386)
133 2oga_A Transaminase; PLP-depen 99.9 2.7E-24 9.3E-29 229.6 26.7 353 80-525 32-396 (399)
134 1e5e_A MGL, methionine gamma-l 99.9 2.1E-23 7E-28 223.4 32.7 161 120-315 61-228 (404)
135 1jg8_A L-ALLO-threonine aldola 99.9 5.2E-25 1.8E-29 230.0 19.4 329 77-524 4-345 (347)
136 3cog_A Cystathionine gamma-lya 99.9 1.4E-24 4.7E-29 232.5 22.4 159 121-315 67-233 (403)
137 2fq6_A Cystathionine beta-lyas 99.9 1.5E-24 5.2E-29 232.7 22.4 337 77-520 46-413 (415)
138 3nyt_A Aminotransferase WBPE; 99.9 9.9E-25 3.4E-29 230.3 20.2 350 80-522 4-361 (367)
139 3ruy_A Ornithine aminotransfer 99.9 8E-23 2.7E-27 217.3 34.8 326 79-522 37-391 (392)
140 2eh6_A Acoat, acetylornithine 99.9 1.9E-23 6.6E-28 220.4 29.6 316 78-521 28-374 (375)
141 2a7v_A Serine hydroxymethyltra 99.9 5.1E-24 1.7E-28 232.2 24.1 358 87-525 64-441 (490)
142 3ppl_A Aspartate aminotransfer 99.9 7E-24 2.4E-28 228.4 23.9 307 123-525 80-420 (427)
143 3b46_A Aminotransferase BNA3; 99.9 7.7E-24 2.6E-28 229.7 24.3 344 89-521 71-443 (447)
144 1vef_A Acetylornithine/acetyl- 99.9 3.5E-23 1.2E-27 220.3 28.9 318 78-522 45-394 (395)
145 3tcm_A Alanine aminotransferas 99.9 3.7E-23 1.3E-27 227.6 30.0 350 89-525 107-494 (500)
146 1n8p_A Cystathionine gamma-lya 99.9 3.2E-24 1.1E-28 228.8 20.5 307 119-522 53-392 (393)
147 3qhx_A Cystathionine gamma-syn 99.9 2.6E-23 8.9E-28 221.7 27.2 307 116-518 61-391 (392)
148 3ei9_A LL-diaminopimelate amin 99.9 8.6E-24 2.9E-28 227.9 23.6 343 77-524 57-427 (432)
149 1uu1_A Histidinol-phosphate am 99.9 6.6E-24 2.3E-28 221.0 21.3 308 77-521 20-334 (335)
150 3ju7_A Putative PLP-dependent 99.9 2.4E-23 8.2E-28 220.8 25.9 350 88-524 13-374 (377)
151 3ez1_A Aminotransferase MOCR f 99.9 2.1E-23 7.2E-28 224.2 25.7 307 123-525 72-415 (423)
152 3asa_A LL-diaminopimelate amin 99.9 1.4E-23 4.9E-28 224.0 24.2 344 77-523 34-391 (400)
153 3h7f_A Serine hydroxymethyltra 99.9 1.3E-23 4.4E-28 228.0 24.0 343 87-525 55-414 (447)
154 2ctz_A O-acetyl-L-homoserine s 99.9 8.8E-24 3E-28 227.5 22.4 325 120-520 57-418 (421)
155 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.5E-23 1.6E-27 222.9 27.7 367 88-523 40-434 (437)
156 3acz_A Methionine gamma-lyase; 99.9 1E-23 3.6E-28 224.5 21.7 161 120-315 58-225 (389)
157 1c4k_A Protein (ornithine deca 99.9 1.9E-23 6.6E-28 237.5 25.0 321 122-526 174-567 (730)
158 3ndn_A O-succinylhomoserine su 99.9 8.2E-23 2.8E-27 219.3 28.1 310 119-517 79-412 (414)
159 2po3_A 4-dehydrase; external a 99.9 1.1E-22 3.7E-27 218.9 28.5 346 89-526 30-387 (424)
160 2x5f_A Aspartate_tyrosine_phen 99.9 1.5E-23 5E-28 226.0 20.9 301 123-524 90-428 (430)
161 3g7q_A Valine-pyruvate aminotr 99.9 9.1E-24 3.1E-28 226.2 19.1 307 123-525 77-413 (417)
162 2vyc_A Biodegradative arginine 99.9 5.6E-23 1.9E-27 235.5 26.8 313 121-525 205-605 (755)
163 3ihj_A Alanine aminotransferas 99.9 8E-23 2.7E-27 224.7 26.7 322 120-525 132-493 (498)
164 3ecd_A Serine hydroxymethyltra 99.9 3.7E-23 1.3E-27 221.8 23.1 343 87-525 42-397 (425)
165 1s0a_A Adenosylmethionine-8-am 99.9 8.9E-22 3E-26 212.0 32.6 341 78-526 43-425 (429)
166 1ibj_A CBL, cystathionine beta 99.9 3.2E-23 1.1E-27 225.5 20.9 307 121-525 133-462 (464)
167 3d6k_A Putative aminotransfera 99.9 7.7E-23 2.6E-27 220.0 23.0 304 123-525 78-418 (422)
168 3ri6_A O-acetylhomoserine sulf 99.9 5E-22 1.7E-26 213.9 26.3 324 116-521 77-428 (430)
169 2ord_A Acoat, acetylornithine 99.9 7.9E-22 2.7E-26 210.0 27.5 325 79-523 41-395 (397)
170 3f6t_A Aspartate aminotransfer 99.9 2.8E-22 9.5E-27 222.2 24.0 366 89-525 116-525 (533)
171 1ax4_A Tryptophanase; tryptoph 99.9 7.1E-23 2.4E-27 222.9 18.2 362 78-527 43-443 (467)
172 3rq1_A Aminotransferase class 99.9 7.7E-22 2.6E-26 211.6 25.6 333 80-526 48-416 (418)
173 2aeu_A Hypothetical protein MJ 99.9 2.8E-22 9.5E-27 212.4 21.6 185 79-315 30-224 (374)
174 7aat_A Aspartate aminotransfer 99.9 1.4E-22 4.9E-27 216.0 18.6 330 79-522 37-400 (401)
175 1sff_A 4-aminobutyrate aminotr 99.9 7.9E-21 2.7E-25 204.0 31.7 342 79-525 42-424 (426)
176 4adb_A Succinylornithine trans 99.9 2.9E-21 1E-25 205.9 27.9 331 79-525 40-400 (406)
177 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.2E-21 4.1E-26 212.7 24.9 351 78-526 42-432 (456)
178 3b1d_A Betac-S lyase; HET: PLP 99.8 8.6E-25 2.9E-29 232.7 0.0 330 89-523 45-391 (392)
179 2pb2_A Acetylornithine/succiny 99.9 9.2E-21 3.2E-25 203.8 30.0 341 65-524 47-417 (420)
180 3meb_A Aspartate aminotransfer 99.9 1.2E-21 3.9E-26 212.6 22.3 330 79-524 58-443 (448)
181 3nmy_A Xometc, cystathionine g 99.9 3E-21 1E-25 206.1 24.1 307 119-519 65-397 (400)
182 3nx3_A Acoat, acetylornithine 99.9 1.7E-20 5.9E-25 199.5 29.7 342 65-524 26-394 (395)
183 3pj0_A LMO0305 protein; struct 99.9 6.7E-21 2.3E-25 199.7 25.9 296 121-521 48-358 (359)
184 3fsl_A Aromatic-amino-acid ami 99.9 2.5E-22 8.5E-27 213.6 15.1 330 80-521 36-396 (397)
185 3t18_A Aminotransferase class 99.9 1.7E-21 5.9E-26 208.5 21.6 328 80-519 47-408 (413)
186 3lws_A Aromatic amino acid bet 99.9 2E-21 6.8E-26 203.7 21.1 293 121-521 47-355 (357)
187 1yaa_A Aspartate aminotransfer 99.9 7E-22 2.4E-26 211.5 16.2 326 79-524 38-410 (412)
188 1ajs_A Aspartate aminotransfer 99.9 1.8E-21 6E-26 208.3 19.2 331 80-524 40-410 (412)
189 3bwn_A AT1G70560, L-tryptophan 99.9 5.9E-22 2E-26 211.1 14.8 289 124-524 71-386 (391)
190 3dxv_A Alpha-amino-epsilon-cap 99.9 5.2E-20 1.8E-24 198.8 30.1 348 79-527 44-427 (439)
191 2eo5_A 419AA long hypothetical 99.9 1.2E-19 4.2E-24 194.8 32.8 329 78-524 42-417 (419)
192 4f4e_A Aromatic-amino-acid ami 99.9 1.1E-21 3.9E-26 210.7 16.5 331 80-522 59-419 (420)
193 2oat_A Ornithine aminotransfer 99.9 4.2E-19 1.4E-23 192.0 36.4 334 79-524 77-438 (439)
194 2oqx_A Tryptophanase; lyase, p 99.9 1.5E-21 5.1E-26 212.4 17.2 358 78-526 41-443 (467)
195 2q7w_A Aspartate aminotransfer 99.9 1.5E-21 5.1E-26 207.5 16.7 327 80-521 36-395 (396)
196 2ay1_A Aroat, aromatic amino a 99.9 1E-21 3.4E-26 208.8 14.7 329 80-521 36-392 (394)
197 1z7d_A Ornithine aminotransfer 99.9 5.3E-19 1.8E-23 190.8 34.6 332 78-524 65-428 (433)
198 3i4j_A Aminotransferase, class 99.9 1.7E-20 6E-25 202.0 22.2 376 64-524 18-427 (430)
199 3n5m_A Adenosylmethionine-8-am 99.9 4E-19 1.4E-23 192.7 32.2 367 64-524 38-451 (452)
200 3a8u_X Omega-amino acid--pyruv 99.8 3.2E-19 1.1E-23 193.3 28.7 360 64-524 39-446 (449)
201 3tfu_A Adenosylmethionine-8-am 99.8 2.9E-19 9.8E-24 194.3 25.7 339 79-525 76-453 (457)
202 3jzl_A Putative cystathionine 99.8 1.9E-19 6.6E-24 192.3 23.9 193 91-315 32-246 (409)
203 3dod_A Adenosylmethionine-8-am 99.8 3.5E-18 1.2E-22 185.1 34.2 362 64-525 33-443 (448)
204 2cjg_A L-lysine-epsilon aminot 99.8 4.7E-19 1.6E-23 192.2 26.5 345 78-524 54-447 (449)
205 3gju_A Putative aminotransfera 99.8 2.7E-18 9.3E-23 186.7 32.1 365 64-525 40-456 (460)
206 3hvy_A Cystathionine beta-lyas 99.8 2.8E-19 9.6E-24 191.8 23.1 214 52-315 25-263 (427)
207 3oks_A 4-aminobutyrate transam 99.8 1.2E-18 4.1E-23 189.1 27.9 349 79-524 62-450 (451)
208 3n75_A LDC, lysine decarboxyla 99.8 7.3E-19 2.5E-23 198.3 26.0 317 121-524 195-559 (715)
209 3i16_A Aluminum resistance pro 99.8 9.9E-19 3.4E-23 187.5 25.8 194 91-315 46-263 (427)
210 4ffc_A 4-aminobutyrate aminotr 99.8 2.4E-18 8.2E-23 186.8 29.2 346 79-525 65-449 (453)
211 1zod_A DGD, 2,2-dialkylglycine 99.8 3E-18 1E-22 184.6 28.5 345 78-524 43-431 (433)
212 4a6r_A Omega transaminase; tra 99.8 3E-18 1E-22 186.3 28.5 363 64-526 39-450 (459)
213 2hox_A ALLIIN lyase 1; cystein 99.8 1.1E-19 3.7E-24 195.9 15.4 294 123-524 102-424 (427)
214 3l44_A Glutamate-1-semialdehyd 99.8 2.8E-18 9.6E-23 184.9 26.1 335 79-525 56-430 (434)
215 4eu1_A Mitochondrial aspartate 99.8 2.6E-19 8.7E-24 191.5 16.7 293 123-522 81-408 (409)
216 2zy4_A L-aspartate beta-decarb 99.8 1.4E-18 4.8E-23 192.7 23.1 156 140-314 166-332 (546)
217 3hmu_A Aminotransferase, class 99.8 1.2E-17 4E-22 182.3 29.5 358 64-525 44-452 (472)
218 3k28_A Glutamate-1-semialdehyd 99.8 1.6E-18 5.5E-23 186.6 22.5 335 79-525 54-427 (429)
219 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 3.9E-19 1.3E-23 189.7 17.3 338 115-525 92-443 (450)
220 3i5t_A Aminotransferase; pyrid 99.8 2.2E-17 7.5E-22 180.3 30.7 368 65-529 44-458 (476)
221 3fq8_A Glutamate-1-semialdehyd 99.8 3.8E-18 1.3E-22 183.5 23.2 203 79-322 53-289 (427)
222 3ht4_A Aluminum resistance pro 99.8 2.7E-18 9.3E-23 184.8 19.1 193 91-315 38-252 (431)
223 3ou5_A Serine hydroxymethyltra 99.8 6.1E-18 2.1E-22 177.3 20.8 356 87-526 64-442 (490)
224 4e77_A Glutamate-1-semialdehyd 99.8 6.7E-17 2.3E-21 173.9 29.8 205 79-322 54-290 (429)
225 2epj_A Glutamate-1-semialdehyd 99.8 2.7E-17 9.3E-22 177.2 26.8 337 79-524 57-430 (434)
226 1ohv_A 4-aminobutyrate aminotr 99.8 2.1E-17 7.1E-22 180.3 25.7 349 78-524 63-470 (472)
227 2cy8_A D-phgat, D-phenylglycin 99.8 2.7E-16 9.4E-21 170.4 29.4 205 79-322 58-291 (453)
228 3k7y_A Aspartate aminotransfer 99.7 1.8E-17 6.2E-22 177.0 18.5 295 123-524 74-404 (405)
229 2e7u_A Glutamate-1-semialdehyd 99.7 1.8E-16 6.1E-21 170.3 22.4 332 79-521 53-423 (424)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.5E-16 5E-21 167.7 17.6 326 126-527 122-463 (501)
231 4h51_A Aspartate aminotransfer 99.7 1.1E-15 3.6E-20 163.7 17.5 339 79-526 53-418 (420)
232 4ao9_A Beta-phenylalanine amin 99.6 4E-14 1.4E-18 152.3 24.9 340 78-531 87-452 (454)
233 4atq_A 4-aminobutyrate transam 99.6 1.3E-12 4.3E-17 141.2 34.7 373 51-524 27-454 (456)
234 2yky_A Beta-transaminase; tran 99.4 1E-16 3.6E-21 173.5 0.0 343 79-529 101-464 (465)
235 4e3q_A Pyruvate transaminase; 99.5 9E-11 3.1E-15 127.2 35.5 359 64-525 56-468 (473)
236 4a0g_A Adenosylmethionine-8-am 99.4 1.4E-11 4.9E-16 142.2 19.7 353 79-525 381-828 (831)
237 2yxb_A Coenzyme B12-dependent 51.4 53 0.0018 29.0 8.2 56 198-263 42-97 (161)
238 3keo_A Redox-sensing transcrip 51.0 30 0.001 32.4 6.7 115 123-274 68-183 (212)
239 1y80_A Predicted cobalamin bin 43.8 98 0.0033 28.4 9.2 78 184-271 93-179 (210)
240 3ezx_A MMCP 1, monomethylamine 37.0 1.1E+02 0.0038 28.3 8.4 78 184-271 97-185 (215)
241 3i6i_A Putative leucoanthocyan 28.0 3.7E+02 0.013 26.1 11.2 57 199-268 58-116 (346)
242 2i2x_B MTAC, methyltransferase 27.9 1.8E+02 0.0063 27.6 8.5 76 184-269 128-210 (258)
243 3mfq_A TROA, high-affinity zin 27.6 1.4E+02 0.0049 28.9 7.7 74 190-268 169-243 (282)
244 1xrs_B D-lysine 5,6-aminomutas 26.0 3.6E+02 0.012 25.8 10.0 66 198-271 152-223 (262)
245 1ccw_A Protein (glutamate muta 25.5 88 0.003 26.6 5.1 64 198-271 27-93 (137)
246 4gqr_A Pancreatic alpha-amylas 25.4 34 0.0012 35.8 2.8 30 242-271 69-98 (496)
247 1zco_A 2-dehydro-3-deoxyphosph 22.2 1.9E+02 0.0064 27.8 7.2 60 217-276 142-205 (262)
248 4h27_A L-serine dehydratase/L- 22.1 3.7E+02 0.013 26.8 9.9 52 141-210 95-147 (364)
249 1g94_A Alpha-amylase; beta-alp 22.0 43 0.0015 35.0 2.8 31 241-271 56-86 (448)
250 4gs5_A Acyl-COA synthetase (AM 21.9 1.3E+02 0.0043 30.1 6.3 26 124-151 25-50 (358)
251 3vc3_A Beta-cyanoalnine syntha 21.7 71 0.0024 32.1 4.3 52 141-210 89-141 (344)
252 2r6j_A Eugenol synthase 1; phe 21.3 5.3E+02 0.018 24.4 11.2 56 199-268 56-112 (318)
253 3ss7_X D-serine dehydratase; t 21.1 5.4E+02 0.019 26.4 11.1 52 141-210 162-214 (442)
254 3o2i_A Uncharacterized protein 20.7 1.6E+02 0.0056 23.3 5.1 24 495-518 93-116 (125)
255 1lwj_A 4-alpha-glucanotransfer 20.7 51 0.0018 34.2 3.1 31 241-271 61-91 (441)
256 3bh4_A Alpha-amylase; calcium, 20.2 52 0.0018 34.7 3.0 30 242-271 71-100 (483)
No 1
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=6.6e-39 Score=338.68 Aligned_cols=372 Identities=23% Similarity=0.288 Sum_probs=289.1
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
+||+|++++++.++.+.+++.+.+...++|++.. +..+......++++++++++++|++++ +|+++ +|+++++..++
T Consensus 1 ~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~-~g~~~a~~~~~ 77 (382)
T 4hvk_A 1 MAYFDYTSAKPVDERILEAMLPYMTESFGNPSSV-HSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLAI 77 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCS-SHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEE-SSHHHHHHHHH
T ss_pred CEeecCCCcCCCCHHHHHHHHHHHHhhcCCCccc-chHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEE-CCchHHHHHHH
Confidence 4799999999999999999999998888888873 556777889999999999999999876 89998 77787888888
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++... ..++|| .|+++..+|+++...+.. .|++++.++.++++.+|+++|+++++ +++
T Consensus 78 ~~~~~~-----------~~~~gd--~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~ 139 (382)
T 4hvk_A 78 IGYAMR-----------NARKGK--HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-----DDT 139 (382)
T ss_dssp HHHHHH-----------HGGGCC--EEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-----TTE
T ss_pred HHhhhh-----------hcCCCC--EEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-----cCc
Confidence 776310 016888 799999999999877655 59999999999889999999999998 689
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++||||.+.|+++|.++|++||+ +|+|++++.+..++++... ++|++++|+||++| |.|+|+++++++
T Consensus 140 ~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~g-~~g~g~~~~~~~ 214 (382)
T 4hvk_A 140 ILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKI---GADMLTISSNDIYG-PKGVGALWIRKE 214 (382)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHH---TCSEEEEESGGGTS-CTTCEEEEEETT
T ss_pred eEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhc---CCCEEEEeHHHhcC-CCceEEEEEcCc
Confidence 999999999999999999999999999999 9999999988777766543 67999999999865 777999999987
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
. .+.+...+++. ..+...++++......+..++... ..+.+.+.++.+++++++.+.
T Consensus 215 ~----~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 215 A----KLQPVILGGGQ------------------ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp C----CCCCSSCSSCT------------------GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred c----CcCcccccCCC------------------cCccccCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 6 34455554443 345567777766654433222211 236788889999999999999
Q ss_pred hCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh---hhh
Q 038499 395 LLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY---GHH 470 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~---~~~ 470 (609)
|+++|++++..+. ..+.+ +++|.+.. .+...+.+.|.+ .||.+++|..|..+. .+.
T Consensus 272 L~~~~~~~~~~~~-~~~~~~~~~~~~~~------------------~~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~ 331 (382)
T 4hvk_A 272 VLKIEESYLNGHP-EKRLPNNVNVRFSY------------------IEGESIVLSLDM-AGIQASTGSACSSKTLQPSHV 331 (382)
T ss_dssp HTTSTTEEECSCS-SSBCTTEEEEEETT------------------CCHHHHHHHHHH-TTCBCBCC--------CCCHH
T ss_pred HhcCCCeEEeCCc-cccCCCEEEEEECC------------------CCHHHHHHHHHH-CCEEEeeCCccCCCCCcchHH
Confidence 9999999998764 23444 66666644 367888998865 599999999887532 111
Q ss_pred --hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCc
Q 038499 471 --LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYN 533 (609)
Q Consensus 471 --ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~ 533 (609)
.+++++.. .++++||++++++|++|+++++++|++++++..++.|+|.
T Consensus 332 ~~~~g~~~~~---------------~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~~~~ 381 (382)
T 4hvk_A 332 LMACGLKHEE---------------AHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSMSPLYR 381 (382)
T ss_dssp HHHTTCCHHH---------------HHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHTCC---
T ss_pred HHHcCCChhh---------------cCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 12222211 1489999999999999999999999999998888777664
No 2
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=4.9e-38 Score=338.05 Aligned_cols=386 Identities=20% Similarity=0.269 Sum_probs=297.0
Q ss_pred CceEEecCCCCCCChHHHHHHHHHhhc--CCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 038499 76 RRLTYADHTASGRSLRYIENYIINNVL--PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 76 ~~~vyld~~a~g~~~~~v~~ai~~~~~--~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal 153 (609)
++.+|+|+++.++.++.|.+++.+.+. ..+++++...+..+......+.++++++++++|++++ +|+|| +|+++++
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~ggt~a~ 98 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFT-SGATESD 98 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SSHHHHH
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEe-CChHHHH
Confidence 368999999999999999999999888 7788888734566777888999999999999999876 89999 6677778
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
..++.++... ..++|| .|+++..+|+++...+.. .|++++.++.++++.+|+++|+++++
T Consensus 99 ~~a~~~l~~~-----------~~~~gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---- 161 (423)
T 3lvm_A 99 NLAIKGAANF-----------YQKKGK--HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR---- 161 (423)
T ss_dssp HHHHHHHHHH-----------HTTTCC--EEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC----
T ss_pred HHHHHHHHHh-----------hccCCC--EEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC----
Confidence 8877765200 013688 799999999999887744 59999999999999999999999998
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||++| |.|+|+++
T Consensus 162 -~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~g-~~g~G~~~ 236 (423)
T 3lvm_A 162 -DDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL---KVDLMSFSGHKIYG-PKGIGALY 236 (423)
T ss_dssp -TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTS---CCSEEEEESTTTTS-CSSCEEEE
T ss_pred -CCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhc---CCCEEEechHHhcC-CCCeEEEE
Confidence 58999999999999999999999999999999999999999988777776654 78999999999765 66799999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
++++. +..+.+...+++. ......++++...... +++.+. +. ..+.+.++.++++
T Consensus 237 ~~~~~--~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~al~~~--~~-~~~~~~~~~~~~~ 293 (423)
T 3lvm_A 237 VRRKP--RVRIEAQMHGGGH------------------ERGMRSGTLPVHQIVGMGEAYRIA--KE-EMATEMERLRGLR 293 (423)
T ss_dssp ECBTT--BCCCCCSSCSSCT------------------TTTTCCSCCCHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHH
T ss_pred Eeccc--cCCCCccccCCcc------------------cccccCCCCCHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHH
Confidence 99988 5566666555443 2334466766655443 333332 22 2688889999999
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh--
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP-- 466 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p-- 466 (609)
+++.+.|+++|+++++.+.......++.|.+.. .+...+.+.|.+ |.+++|..|...
T Consensus 294 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~l~~---i~v~~g~~~~~~~~ 352 (423)
T 3lvm_A 294 NRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNY------------------VEGESLIMALKD---LAVSSGSACTSASL 352 (423)
T ss_dssp HHHHHHHTTSTTEEEESCSTTBCTTEEEEEETT------------------SCHHHHHHHTTT---EECBCCCC-----C
T ss_pred HHHHHHHhcCCCEEEeCCccccCCCeEEEEeCC------------------CCHHHHHHHHhh---heeccCccccCCCc
Confidence 999999999999999876432223466666643 467788888854 999999888741
Q ss_pred ---hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCcc-----cccC
Q 038499 467 ---YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYNF-----NIKT 538 (609)
Q Consensus 467 ---~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~~-----~~~~ 538 (609)
+.....++.... .++++||+++..+|++|+++++++|+++++...++.|.|.. +..+
T Consensus 353 ~~~~~~~~~g~~~~~---------------~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (423)
T 3lvm_A 353 EPSYVLRALGLNDEL---------------AHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNS 417 (423)
T ss_dssp CCCHHHHHHTCCHHH---------------HHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTSSHHHHHTTSCCCSCC
T ss_pred cccHHHHHhCCCccc---------------cCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhccCccchhhhcccccCc
Confidence 111112332211 14899999999999999999999999999999998887655 6777
Q ss_pred Cceeec
Q 038499 539 GTWCFM 544 (609)
Q Consensus 539 ~~w~~~ 544 (609)
-+|+|.
T Consensus 418 ~~~~~~ 423 (423)
T 3lvm_A 418 IEWAHH 423 (423)
T ss_dssp ------
T ss_pred hhhhcC
Confidence 789874
No 3
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2.7e-37 Score=329.56 Aligned_cols=393 Identities=25% Similarity=0.352 Sum_probs=300.9
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
+..+|++|+..+..+ .| +.++|||+++.++.++.+.+++.+.+...++|++...+..++.......++++.+++++
T Consensus 5 ~~~~r~~f~~~~~~~---~g-~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~ 80 (406)
T 1kmj_A 5 VDKVRADFPVLSREV---NG-LPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI 80 (406)
T ss_dssp HHHHHHTCGGGGCEE---TT-EECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCccccccc---CC-CceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc
Confidence 467899998543111 12 25899999999999999999999988877778876544455667788899999999999
Q ss_pred CC-CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEe
Q 038499 135 GG-GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIG 209 (609)
Q Consensus 135 g~-~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~ 209 (609)
|. +++ +|+|+ +|+++++..++.++... .+++|| .|+++.++|+++...| +..|++++.++
T Consensus 81 ~~~~~~-~v~~~-~g~t~a~~~~~~~~~~~-----------~~~~gd--~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (406)
T 1kmj_A 81 NARSAE-ELVFV-RGTTEGINLVANSWGNS-----------NVRAGD--NIIISQMEHHANIVPWQMLCARVGAELRVIP 145 (406)
T ss_dssp TCSCGG-GEEEE-SSHHHHHHHHHHHTHHH-----------HCCTTC--EEEEETTCCGGGTHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCC-eEEEe-CChhHHHHHHHHHhhhh-----------cCCCCC--EEEEecccchHHHHHHHHHHHhCCCEEEEEe
Confidence 99 454 89999 67777888888776200 036788 6999999999887554 45799999999
Q ss_pred cCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCc
Q 038499 210 LDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 210 ~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~ 289 (609)
.++++.+|+++|+++++ ++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.
T Consensus 146 ~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~ 217 (406)
T 1kmj_A 146 LNPDGTLQLETLPTLFD-----EKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DC 217 (406)
T ss_dssp BCTTSCBCGGGHHHHCC-----TTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TC
T ss_pred cCCCCCcCHHHHHHHhc-----cCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CC
Confidence 98888899999999997 57999999999999999999999999999999999999999988766554433 67
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHH--HH
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRA--AL 367 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~a--al 367 (609)
|++++|+||++| |.|+|++++++++ ++.+.+...||+.+.... ......+.....+++.|++++.+.+.. ++
T Consensus 218 d~~~~s~~K~~g-~~G~G~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 291 (406)
T 1kmj_A 218 DFYVFSGHKLYG-PTGIGILYVKEAL--LQEMPPWEGGGSMIATVS---LSEGTTWTKAPWRFEAGTPNTGGIIGLGAAL 291 (406)
T ss_dssp SEEEEEGGGTTS-CTTCEEEEECHHH--HHHCCCSSCSTTSEEEEE---TTTEEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred CEEEEEchhccC-CCCcEEEEEeHHH--HhhcCCcccCCCceeecc---cccccccCCCchhccCCCCCHHHHHHHHHHH
Confidence 999999999995 6669999999888 455666666665543321 000011122234566788887776543 34
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHH
Q 038499 368 AFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVAT 447 (609)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 447 (609)
.+. +..+.+.+.++.+++++++.+.|+++|+++++.+. .+.+++.|.+.. .+..++.+
T Consensus 292 ~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~------------------~~~~~~~~ 349 (406)
T 1kmj_A 292 EYV--SALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ--NRLGVIAFNLGK------------------HHAYDVGS 349 (406)
T ss_dssp HHH--HHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCT--TCCSEEEEEETT------------------CCHHHHHH
T ss_pred HHH--HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CcCCEEEEEECC------------------CCHHHHHH
Confidence 433 33478889999999999999999999999988763 256777776532 35678888
Q ss_pred HHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 448 LLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 448 ~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.|.+ .||.+++|..|..+... ..+ .++++||+++.++|++|+++++++|+++++.
T Consensus 350 ~l~~-~gi~v~~g~~~~~~~~~-~~g--------------------~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 350 FLDN-YGIAVRTGHHCAMPLMA-YYN--------------------VPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp HHHH-TTEECEEECTTCHHHHH-HTT--------------------CSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhh-CCcEEEeccccchHHHH-hcC--------------------CCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 8865 59999999888743211 111 1489999999999999999999999998764
No 4
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.7e-37 Score=328.62 Aligned_cols=371 Identities=22% Similarity=0.291 Sum_probs=284.2
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
++|+|+++.++.++.|.+++.+.+...++|+++ .+..+........++++++++++|++++ +|++| +|+++++..++
T Consensus 1 ~~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~~ 77 (382)
T 4eb5_A 1 MAYFDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLAI 77 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEE-SSHHHHHHHHH
T ss_pred CeeeccCCCCCCCHHHHHHHHHHHHhccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEc-CchHHHHHHHH
Confidence 379999999999999999999988877778776 3455666778899999999999999765 89998 67777888887
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++... ..++|| .|+++..+|+++...++. .|++++.+++++++.+|+++|+++++ +++
T Consensus 78 ~~l~~~-----------~~~~gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~ 139 (382)
T 4eb5_A 78 IGYAMR-----------NARKGK--HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-----DDT 139 (382)
T ss_dssp HHHHHH-----------HGGGCC--EEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-----TTE
T ss_pred HHHHhh-----------ccCCCC--EEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-----CCC
Confidence 765200 015788 799999999998877754 69999999998888899999999998 579
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++||||.+.|+++|.++|++||++ |+|++++.+..++++... +.|++++|+||++| |.|+|+++++++
T Consensus 140 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~~g-~~g~G~~~~~~~ 214 (382)
T 4eb5_A 140 ILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDIYG-PKGVGALWIRKE 214 (382)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGGTC-CSSCEEEEEETT
T ss_pred eEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHhcC-CCceEEEEEccc
Confidence 9999999999999999999999999999999 999999987666555433 67999999999855 778999999887
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
. .+.+...+++. ..+...++++..... .+++.++ +. +.+.+.++.+++++++.
T Consensus 215 ~----~l~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~al~~~--~~-~~~~~~~~~~~~~~~l~ 269 (382)
T 4eb5_A 215 A----KLQPVILGGGQ------------------ENGLRSGSENVPSIVGFGKAAEIT--AM-EWREEAERLRRLRDRII 269 (382)
T ss_dssp C----CCCCSSCSSCT------------------GGGTSCSCCCHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHHHHHH
T ss_pred c----ccCceecCCCc------------------cccccCCCccHHHHHHHHHHHHHH--HH-hHHHHHHHHHHHHHHHH
Confidence 4 23333333322 233445676655543 3344443 22 57788899999999999
Q ss_pred HHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh---hh
Q 038499 393 ERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY---GH 469 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~---~~ 469 (609)
+.|+++|+++++.+......++++|.+.+ .+..++.+.|.+ .||.+++|..|.... .+
T Consensus 270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~ 330 (382)
T 4eb5_A 270 DNVLKIEESYLNGHPEKRLPNNVNVRFSY------------------IEGESIVLSLDM-AGIQASTGSACSSKTLQPSH 330 (382)
T ss_dssp HHHTTSTTEEECSCSSSBCTTEEEEEETT------------------SCHHHHHHHHHH-HTCBCBCCCGGGTSSCCCCH
T ss_pred HHHhhCCCeEEeCCcccCCCCEEEEEeCC------------------cCHHHHHHHHHH-CCEEEeccccccCCCCcccH
Confidence 99999999998876321124466666543 357788888865 699999998876321 01
Q ss_pred hh--cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCc
Q 038499 470 HL--LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYN 533 (609)
Q Consensus 470 ~l--l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~ 533 (609)
.+ ++.++.. .++++||+++.+++++|+++++++|+++++...++.+.|.
T Consensus 331 ~~~~~g~~~~~---------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~ 381 (382)
T 4eb5_A 331 VLMACGLKHEE---------------AHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSMSPLYR 381 (382)
T ss_dssp HHHHTTCCHHH---------------HTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHTCTTC-
T ss_pred HHHHcCCChhc---------------cCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 11 1111100 1589999999999999999999999999988887777774
No 5
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-36 Score=322.88 Aligned_cols=399 Identities=24% Similarity=0.332 Sum_probs=300.3
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIK 131 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia 131 (609)
+..++.+|+.|+..... +..++++|||++..++.|+.|.+++.+.+.....|++...+..+........++++.++
T Consensus 7 ~~~~~~~r~~f~~~~~~----~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la 82 (420)
T 1t3i_A 7 PSLAATVRQDFPILNQE----INGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVA 82 (420)
T ss_dssp CCHHHHHGGGCGGGSCE----ETTEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCccccc----cCCCceEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHH
Confidence 34568899999865421 11235899999999998999999999988776667765333344444677899999999
Q ss_pred HHhCC-CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH----HHHcCceEE
Q 038499 132 KCLGG-GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS----WRQSLAEVV 206 (609)
Q Consensus 132 ~~~g~-~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~----~~~~G~~vv 206 (609)
+++|. +++ +|++| +|+++++..++.++.. ..+++|| .|+++.++|++...+ .+..|++++
T Consensus 83 ~~~~~~~~~-~v~~~-~g~t~a~~~~~~~~~~-----------~~~~~gd--~Vl~~~~~~~~~~~~~~~~~~~~g~~~~ 147 (420)
T 1t3i_A 83 KFINARSPR-EIVYT-RNATEAINLVAYSWGM-----------NNLKAGD--EIITTVMEHHSNLVPWQMVAAKTGAVLK 147 (420)
T ss_dssp HHTTCSCGG-GEEEE-SSHHHHHHHHHHHTHH-----------HHCCTTC--EEEEETTCCGGGTHHHHHHHHHHCCEEE
T ss_pred HHcCCCCCC-eEEEc-CChHHHHHHHHHHhhh-----------cccCCCC--EEEECcchhHHHHHHHHHHHHhcCcEEE
Confidence 99999 555 89999 6777788888877620 0036788 699999999996533 346799999
Q ss_pred EEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCC
Q 038499 207 EIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQT 286 (609)
Q Consensus 207 ~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~ 286 (609)
.++.+.++.+|+++|+++++ +++++|++++++||||.+.|+++|.++|++||+++|+|++++.+..++++...
T Consensus 148 ~v~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-- 220 (420)
T 1t3i_A 148 FVQLDEQESFDLEHFKTLLS-----EKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI-- 220 (420)
T ss_dssp EECBCTTSSBCHHHHHHHCC-----TTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH--
T ss_pred EeccCCCCCcCHHHHHHhhC-----CCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc--
Confidence 99998888899999999998 57999999999999999999999999999999999999999988766555443
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHH-
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRA- 365 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~a- 365 (609)
+.|++++|+||.+| |.|+|++++++++ ++.+.+...+|+....... ....+...+.+++.|++++.+.+..
T Consensus 221 -~~di~~~s~sK~~~-~~g~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~ 292 (420)
T 1t3i_A 221 -DCDWLVASGHKMCA-PTGIGFLYGKEEI--LEAMPPFFGGGEMIAEVFF----DHFTTGELPHKFEAGTPAIAEAIALG 292 (420)
T ss_dssp -TCSEEEEEGGGTTS-CTTCEEEEECHHH--HHHSCCCSCSTTSEEEECS----SCEEECCTTGGGCCSSCCHHHHHHHH
T ss_pred -CCCEEEEehhhhcC-CCceEEEEEchHH--HhhcCceecCCCccccccc----cccCCCCchhhccCCCccHHHHHHHH
Confidence 67999999999765 6669999999988 4456566555554433210 1111223345566788887776543
Q ss_pred -HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCC--CCcceEEEEeccCCCCCcCCCCCCCCCCCCCCh
Q 038499 366 -ALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTST--KRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442 (609)
Q Consensus 366 -al~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~--~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 442 (609)
++.++ +..+.+.+.++.+++++++.+.|+++|+++++.+... .+.++++|.+.. .+.
T Consensus 293 ~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~ 352 (420)
T 1t3i_A 293 AAVDYL--TDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG------------------LHA 352 (420)
T ss_dssp HHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT------------------BCH
T ss_pred HHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECC------------------CCH
Confidence 34443 3457888999999999999999999999999876310 146777776533 356
Q ss_pred HHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 443 ~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..+.+.|.+ .||.+++|..|..+.... .+ .++++||+++.+++++|+++++++|++++
T Consensus 353 ~~~~~~l~~-~gi~v~~~~~~~~~~~~~-~g--------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 410 (420)
T 1t3i_A 353 SDVATMVDQ-DGIAIRSGHHCTQPLHRL-FD--------------------ASGSARASLYFYNTKEEIDLFLQSLQATI 410 (420)
T ss_dssp HHHHHHHHT-TTEECBCSCTTCHHHHHH-TT--------------------CCCCEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCeEEeeccccchHHHHh-cC--------------------CCCeEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 788888865 699999998887432111 11 14899999999999999999999999998
Q ss_pred Hhcc
Q 038499 523 IYGQ 526 (609)
Q Consensus 523 ~~~~ 526 (609)
+...
T Consensus 411 ~~~~ 414 (420)
T 1t3i_A 411 RFFS 414 (420)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 7654
No 6
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.2e-37 Score=328.25 Aligned_cols=369 Identities=16% Similarity=0.197 Sum_probs=285.6
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL 134 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~ 134 (609)
++.+|++||..+ +..+|||+++.++.++.|.+++.+.+...+.|++. .+..+........++++.+++++
T Consensus 13 ~~~~r~~fp~~~---------~~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~ 82 (406)
T 3cai_A 13 VARVRGLHPSLG---------DGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG-AHPSARRSAAVLDAAREAVADLV 82 (406)
T ss_dssp HHHHHHTCTTTT---------SSCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCS-SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcC---------CCeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCC-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 468999998654 24899999999999999999999888766667653 24455566788999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEec
Q 038499 135 GGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGL 210 (609)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~ 210 (609)
|++++ +|+|| +|+++++..++.++.. .+++|| .|+++..+|+++..+|.. .|++++.++.
T Consensus 83 g~~~~-~v~~~-~g~t~al~~~~~~l~~------------~~~~gd--~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T 3cai_A 83 NADPG-GVVLG-ADRAVLLSLLAEASSS------------RAGLGY--EVIVSRLDDEANIAPWLRAAHRYGAKVKWAEV 146 (406)
T ss_dssp TCCGG-GEEEE-SCHHHHHHHHHHHTGG------------GGBTTC--EEEEETTSCGGGTHHHHHHHHHHBCEEEEECC
T ss_pred CCCCC-eEEEe-CChHHHHHHHHHHHhh------------ccCCCC--EEEEcCCccHHHHHHHHHHHHhcCCeEEEEec
Confidence 99766 89998 7777889988776510 146888 699999999998877765 6999999999
Q ss_pred C-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCc
Q 038499 211 D-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGY 289 (609)
Q Consensus 211 ~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~ 289 (609)
+ +++.+|+++|+++++ ++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.
T Consensus 147 ~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~ 218 (406)
T 3cai_A 147 DIETGELPTWQWESLIS-----KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET---DA 218 (406)
T ss_dssp CTTTCCCCGGGHHHHCC-----TTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH---CC
T ss_pred CcccCCcCHHHHHHHhC-----CCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc---CC
Confidence 8 678899999999997 58999999999999999999999999999999999999999988776665443 68
Q ss_pred cEEEEcCCCCCCCCCCcE-EEEEechhhccCCCCCCcc--CCCceEeecccccccccccccccccccCCChhHHHHH--H
Q 038499 290 DAIFLSTHKFLGGPGSPG-ILLMTKALYQLGSFPPSTC--GGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--R 364 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G-~L~~~~~~~~l~~~~p~~~--ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~ 364 (609)
|++++|+||++| |. +| ++++++++ ++.+.+... |++ ...+++.||++..+.. .
T Consensus 219 d~~~~s~~K~~g-~~-~G~~~~~~~~~--~~~l~~~~~~~~~~------------------~~~~~~~~t~~~~~~~a~~ 276 (406)
T 3cai_A 219 DVVTVNAHAWGG-PP-IGAMVFRDPSV--MNSFGSVSTNPYAT------------------GPARLEIGVHQFGLLAGVV 276 (406)
T ss_dssp SEEEEEGGGGTS-CS-CEEEEESCHHH--HHTSCCCCSCTTCC------------------GGGGGCCSCCCHHHHHHHH
T ss_pred CEEEeehhhhcC-CC-cCeEEEEehHH--HhhcCCcccCCCCC------------------ccccccCCCccHHHHHHHH
Confidence 999999999886 66 78 99999887 445544321 111 1345567888776654 3
Q ss_pred HHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 365 AALAFWVKEYIG--------------HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 365 aal~~~~~~~~g--------------~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
+++.+. +..| .+.+.++.+++++++.+.|+++|+++++.+. ..+.++++|.+..
T Consensus 277 ~al~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~--------- 344 (406)
T 3cai_A 277 ASIEYL--AALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP-EAQIPVVSFAVHK--------- 344 (406)
T ss_dssp HHHHHH--HTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCC-SSBCSEEEEEETT---------
T ss_pred HHHHHH--HHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCc-cccCCEEEEEECC---------
Confidence 344443 3434 6788899999999999999999999988763 2356777776643
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
.+...+.+.|.+ .||.+++|+. +......+... ..+++||+++.++|++|
T Consensus 345 ---------~~~~~~~~~L~~-~gi~v~~g~~---~~~~~~~g~~~-----------------~~~~iRis~~~~~t~e~ 394 (406)
T 3cai_A 345 ---------VPADRVVQRLAD-NGILAIANTG---SRVLDVLGVND-----------------VGGAVTVGLAHYSTMAE 394 (406)
T ss_dssp ---------BCHHHHHHHHHH-TTEECEECCS---CHHHHHHTTTT-----------------TTCCEEEECCTTCCHHH
T ss_pred ---------cCHHHHHHHHHH-CCcEEecCCh---HHHHHHcCCCC-----------------CCCeEEEEeecCCCHHH
Confidence 357788888865 6999998761 11111111110 14799999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 511 FEFTLEALEFI 521 (609)
Q Consensus 511 id~ll~al~~v 521 (609)
+++++++|+++
T Consensus 395 i~~~~~~l~~~ 405 (406)
T 3cai_A 395 VDQLVRALASL 405 (406)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999754
No 7
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=9.7e-35 Score=307.44 Aligned_cols=364 Identities=21% Similarity=0.291 Sum_probs=269.5
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
+|||+++.++.++.|.+++.+.+...|++++. .+..++.......++++.+++++|++++ +|+++ +|+++++..++.
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~~~ 79 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFT-SCATESINWILK 79 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEE-SCHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEE-CCHHHHHHHHHH
Confidence 89999999999999999999998877777765 3456677788899999999999998876 89998 677778888887
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++... .+++|| .|+++..+|+++...+ +..|++++.++.++++.+|+++|+++++ ++++
T Consensus 80 ~~~~~-----------~~~~gd--~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~~ 141 (384)
T 1eg5_A 80 TVAET-----------FEKRKR--TIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-----EDTF 141 (384)
T ss_dssp HHHHH-----------TTTTCC--EEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-----TTEE
T ss_pred hhhhh-----------ccCCCC--EEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-----CCCe
Confidence 76300 015788 6999999999987766 6679999999998888899999999998 5799
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhC--CeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYG--GFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g--~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
++++++++||||.+.|+++|.++|++|| +++|+|++++.+..++++... +.|++++|+||++| |.|+|++++++
T Consensus 142 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~g-~~G~G~~~~~~ 217 (384)
T 1eg5_A 142 LVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKFHG-PKGVGITYIRK 217 (384)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGGTS-CTTCEEEEECT
T ss_pred EEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhc---CCCEEEecHHHhcC-CCceEEEEEcC
Confidence 9999999999999999999999999999 999999999877666666543 68999999999976 66689999988
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
++ .+.+...+++. ..+...++++..... .+++... ..+.+.+.++.+++++++
T Consensus 218 ~~----~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 218 GV----PIRPLIHGGGQ------------------ERGLRSGTQNVPGIVGAARAMEIA---VEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp TS----CCCCSBCSSCT------------------TTTTBCSCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHH
T ss_pred CC----ccccccccCcc------------------cccccCCCCChHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHH
Confidence 75 22232222211 112234555554433 2333332 235788889999999999
Q ss_pred HHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh---h
Q 038499 392 LERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY---G 468 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~---~ 468 (609)
.+.|++ +++++..+.......++.|.+.. .+...+.+.|.+ .||.+++|..|..+. .
T Consensus 273 ~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~ 332 (384)
T 1eg5_A 273 VSGLMN-LGAHIITPLEISLPNTLSVSFPN------------------IRGSTLQNLLSG-YGIYVSTSSACTSKDERLR 332 (384)
T ss_dssp HHHHHT-TTCEECSCTTSBCTTEEEEECTT------------------CCHHHHHHHHHH-TTEECBC------------
T ss_pred HHHhCC-CCeEEeCCcccCCCCEEEEEeCC------------------CCHHHHHHHHhh-CCeEEeccccccCCCCcch
Confidence 999988 68988765321123455565443 357788888864 699999998775320 1
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+..++.+... .++++||++++++|++|+++++++|+++++..
T Consensus 333 ~~~~~~g~~~~~-------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 333 HVLDAMGVDRRI-------------AQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp CHHHHTTCCHHH-------------HHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCChhh-------------cCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 111111100000 13799999999999999999999999998764
No 8
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=319.20 Aligned_cols=351 Identities=13% Similarity=0.047 Sum_probs=265.5
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCC--CchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTC--DSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~--~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+--+|.+++++.|+.|.+++.+.+..+++|+.+. .+..+....+.++++|+.+++++|++++++|+|+.+|+|+++++
T Consensus 13 ~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ 92 (377)
T 3e77_A 13 LGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSA 92 (377)
T ss_dssp --CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHH
Confidence 3357888999999999999999999888877553 13467778999999999999999997645899954677778998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH--HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
++..+-. -++|| .|++...+|+++.. .++..|++++.++.+.++.+++++++.+++ ++
T Consensus 93 a~~~l~~-------------~~~Gd--~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-----~~ 152 (377)
T 3e77_A 93 VPLNLIG-------------LKAGR--CADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-----PD 152 (377)
T ss_dssp HHHHHGG-------------GSTTC--EEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-----TT
T ss_pred HHHhccC-------------CCCCC--eEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-----CC
Confidence 8776520 02377 57777777777531 123458888888887666677777766665 68
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK 313 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~ 313 (609)
|++|++++.+|.||++.|+ +|+++|+++++|++|++|+.++|+..+ |++++|+|||+| |.|+|+|++++
T Consensus 153 t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~-----~~~~~s~~K~~g-p~G~g~l~~~~ 221 (377)
T 3e77_A 153 ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKF-----GVIFAGAQKNVG-SAGVTVVIVRD 221 (377)
T ss_dssp CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGC-----SEEEEEGGGTTS-CTTCEEEEEET
T ss_pred ccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhc-----CEEEEecccccC-CCccEEEEEcH
Confidence 9999999999999999998 477899999999999999999999875 578999999995 99999999999
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEETYIERAL 392 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~~l~~~~~ 392 (609)
++ ++.+.|..+. . ..|....+...+.+||++.+++....++...... |++.+.+++++++++++
T Consensus 222 ~~--l~~~~~~~p~--~-----------~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~ 286 (377)
T 3e77_A 222 DL--LGFALRECPS--V-----------LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIY 286 (377)
T ss_dssp TS--CSCCCTTSCG--G-----------GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HH--HhhccCCCCc--h-----------hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 99 6666554321 1 0011111233457899988876544343333556 79999999999999999
Q ss_pred HHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCCh-----HHHHHHHhhhcCcEeccCcccCCh
Q 038499 393 ERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHG-----PFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~-----~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+.|+++|++.+.......|++ +++|.+.. +++ ..+.+.|. .+||.+++|..
T Consensus 287 ~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~------------------~~~~~~~~~~~l~~l~-~~Gi~~~~g~~---- 343 (377)
T 3e77_A 287 EIIDNSQGFYVCPVEPQNRSKMNIPFRIGN------------------AKGDDALEKRFLDKAL-ELNMLSLKGHR---- 343 (377)
T ss_dssp HHHHTSTTSEECCSCGGGBCSSEEEEEESS------------------TTCCHHHHHHHHHHHH-HTTEESCBCCT----
T ss_pred HHHHhcCCceecCCCHHHcCCcEEEEEcCC------------------CCCchhHHHHHHHHHH-HCCcEEeCCCC----
Confidence 999999999875432234666 58888875 232 24555554 46999886631
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+.+|+|+++++|++||++++++|++++++
T Consensus 344 ---------------------------~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 344 ---------------------------SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp ---------------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1367999999999999999999999998865
No 9
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=4.8e-36 Score=319.88 Aligned_cols=368 Identities=20% Similarity=0.231 Sum_probs=261.8
Q ss_pred CCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 72 PFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 72 p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
|+.....+|||+++.++.++.+.+++.+.+...++|++. .+..+....+.++++++++++++|++++ +|++| +|+++
T Consensus 15 ~~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~g~t~ 91 (400)
T 3vax_A 15 VPRGSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGS-RHEYGIRAKRGVERAREYLASTVSAEPD-ELIFT-SGATE 91 (400)
T ss_dssp -------CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEE-SCHHH
T ss_pred CcccCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEe-CCHHH
Confidence 333457899999999999999999999988877778776 3455666778899999999999999876 89998 77777
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH---cCceEEEEecCCCCCCCHHHHHHHHhhh
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ---SLAEVVEIGLDDDGLLDIEALRSKLELY 228 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~g~ld~e~L~~al~~~ 228 (609)
++..++.++... ..++||. .|+++..+|+++...++. .|++++.++.++++.+|+++|+++++
T Consensus 92 al~~~~~~l~~~-----------~~~~gd~-~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-- 157 (400)
T 3vax_A 92 SNNIALLGLAPY-----------GERTGRR-HIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-- 157 (400)
T ss_dssp HHHHHHHTTHHH-----------HHHHTCC-EEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC--
T ss_pred HHHHHHHHHHHh-----------hccCCCC-EEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC--
Confidence 888887765100 0146761 489999999998877765 59999999999899999999999998
Q ss_pred ccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 229 KDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +|++++|+||++ ||.|+|+
T Consensus 158 ---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~----~d~~~~s~~K~~-g~~g~g~ 229 (400)
T 3vax_A 158 ---PDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP----IDMISISGHKIG-APKGVGA 229 (400)
T ss_dssp ---TTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC----CSEEEEETGGGT-SCSSCEE
T ss_pred ---CCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc----CcEEEEeHHHhC-CCCceEE
Confidence 68999999999999999999999999999999999999999988877776542 799999999965 4778999
Q ss_pred EE-Eechhhcc---CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHH
Q 038499 309 LL-MTKALYQL---GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 309 L~-~~~~~~~l---~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~ 382 (609)
++ ++++.. + ..+.+...++.. ..+...++++..+... +++.+. + .+.+.+.+
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~al~~~--~-~~~~~~~~ 287 (400)
T 3vax_A 230 LVTRRREEM-DDERVPLEPIMFGGGQ------------------ERKLRPGTLPVPLIMGLAEAAKIF--E-AEHAQWQV 287 (400)
T ss_dssp EEECBCSSS-TTCBCCCCCSSCSSCT------------------GGGTSCSCCCHHHHHHHHHHHHHH--H-HSHHHHHH
T ss_pred EEEecchhc-cccccccCceecCCCc------------------eeeeecCCCCHHHHHHHHHHHHHH--H-hhHHHHHH
Confidence 99 888321 1 133444433332 3445567777666543 333332 2 36788999
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC 461 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~ 461 (609)
+.+++++++.+.|+ .+++++..+.. .+.+ ++.|.+.. .+...+.+.|. .||.+++|.
T Consensus 288 ~~~~~~~~l~~~L~-~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~l~~~L~--~gi~v~~g~ 345 (400)
T 3vax_A 288 AAQDLRSRLLAGLA-STSFQVNGDQD-HVVPHILNLSFED------------------VDAEAFLVTLK--DLVAVATGS 345 (400)
T ss_dssp HHHHHHHHHHHHHT-TTTCEECSCTT-SBCTTEEEEECTT------------------CCHHHHHHHHH--HHHHHTTTT
T ss_pred HHHHHHHHHHHhhC-CCCEEEeCCcc-cCCCCEEEEEeCC------------------CCHHHHHHHHh--cCcEEEecc
Confidence 99999999999999 88999987643 2333 56665543 46788999986 699999998
Q ss_pred ccCCh---hhhhh--cCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHH
Q 038499 462 ACAGP---YGHHL--LDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 462 ~ca~p---~~~~l--l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~ 523 (609)
.|... ..+.+ +++.+.. .++++||++ +.++|++|+++++++|+++++
T Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~---------------~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 346 ASTSASFTPSHVLRAMGLPEEA---------------ASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp EEEEEEECCHHHHHTTTCCHHH---------------HTSEEEEEEEEC-------------------
T ss_pred cccCCCCCccHHHHHcCCCccc---------------cCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 88742 11112 2222111 158999999 999999999999999998765
No 10
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=2.7e-36 Score=329.42 Aligned_cols=393 Identities=14% Similarity=0.114 Sum_probs=286.9
Q ss_pred HHHHHhhccCCCcc------ccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhh-HHHHHHHHHHH
Q 038499 55 LTWLQSQIIGKNAE------FDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVG-QHTTNMVHEAS 127 (609)
Q Consensus 55 ~~~~r~~~~g~~~~------~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~-~~~~~~~~e~r 127 (609)
+..+|+.|+..... .....+.++.+|||+++.|+.|+.+.+++.+.+. .|++.....+..+ ..+....++++
T Consensus 39 l~~~r~~f~~~~~~~~~~~~~~~~~~~~~~iyld~~~~g~~p~~v~~~i~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (465)
T 3e9k_A 39 LRHFRECFYIPKIQDLPPVDLSLVNKDENAIYFLGNSLGLQPKMVKTYLEEELD-KWAKIAAYGHEVGKRPWITGDESIV 117 (465)
T ss_dssp TGGGGGGEECCBGGGSTTCCGGGSCTTCBCEECBTTTSCCEETTHHHHHHHHHH-HHHHHGGGGGTSSSSCGGGTTHHHH
T ss_pred HHHHHHhcCCCCcccccccccccccCCCCeEEecCCccCCChHHHHHHHHHHHH-HHHhhCCcccccCCccHHHhHHHHH
Confidence 55788888743200 0001123478999999999999989888877663 3332221101111 11234557789
Q ss_pred HHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC-ceEEEECCCCccchHHHHH----HcC
Q 038499 128 NYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE-RWVVFVGPHEHHSNLLSWR----QSL 202 (609)
Q Consensus 128 ~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~----~~G 202 (609)
+++++++|++++ +|+|+ +|++++++.++.++. ++++ +..|+++..+|+++..+|. ..|
T Consensus 118 ~~la~~~g~~~~-~v~~t-~g~t~al~~~~~~~~---------------~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G 180 (465)
T 3e9k_A 118 GLMKDIVGANEK-EIALM-NALTVNLHLLMLSFF---------------KPTPKRYKILLEAKAFPSDHYAIESQLQLHG 180 (465)
T ss_dssp GGGHHHHTCCGG-GEEEC-SCHHHHHHHHHHHHC---------------CCCSSSCEEEEETTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCcC-CEEEE-CCHHHHHHHHHHHhc---------------cccCCCCEEEEcCCcCCchHHHHHHHHHHcC
Confidence 999999999876 89998 788889999888773 3443 2369999999999776554 468
Q ss_pred ceE-----EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc
Q 038499 203 AEV-----VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (609)
Q Consensus 203 ~~v-----v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~ 277 (609)
+++ ..++.+.++.+|+++|+++|+++. ++++++++++++|+||.+.|+++|.++||+||+++++|++|+.|..
T Consensus 181 ~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~--~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~ 258 (465)
T 3e9k_A 181 LNIEESMRMIKPREGEETLRIEDILEVIEKEG--DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNV 258 (465)
T ss_dssp CCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG--GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS
T ss_pred CcceeeeEEEecCCCCCccCHHHHHHHHHhcC--CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCc
Confidence 774 344666678899999999997421 4789999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccEEEEcCCCCC-CCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 278 EIDVRSGQTDGYDAIFLSTHKFL-GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~l-ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
++++..+ ++|++++|+||++ +||.|+|++++++++ ++.+.+...|+........|.......+.....+++.||
T Consensus 259 ~~~~~~~---~~D~~~~s~~K~l~~gp~~~g~l~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 333 (465)
T 3e9k_A 259 ELYLHDW---GVDFACWCSYKYLNAGAGGIAGAFIHEKH--AHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISN 333 (465)
T ss_dssp CCCHHHH---TCCEEEECSSSTTCCCTTCCCEEEECGGG--TTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSC
T ss_pred CCchhhc---CCCEEEECcccccccCCCceEEEEEcHHH--HhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCC
Confidence 8887765 7899999999999 578889999999998 556666655532211011111111112233457788999
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----------CceEEeCCCC-CCCcceEEEEeccCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----------QNIKILGNTS-TKRQAILSFNIHSSTIN 425 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----------p~i~v~~~~~-~~r~~~~~f~~~~~~~~ 425 (609)
+++.+++....++...+..|++.+.++.+++++++.+.|+++ ++++++.+.+ ..+.++++|.+..
T Consensus 334 ~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---- 409 (465)
T 3e9k_A 334 PPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---- 409 (465)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC----
T ss_pred ccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC----
Confidence 998877644333333355689999999999999999999875 7999998743 2357788886653
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CC
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PY 504 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~ 504 (609)
+...+.+.|.+ .||.++.+ .++++|+|+ +.
T Consensus 410 ---------------~~~~l~~~L~~-~Gi~v~~~---------------------------------~~~~iRis~~~~ 440 (465)
T 3e9k_A 410 ---------------PNKDVFQELEK-RGVVCDKR---------------------------------NPNGIRVAPVPL 440 (465)
T ss_dssp ---------------TTCCHHHHHHT-TTEECEEE---------------------------------TTTEEEEBCCTT
T ss_pred ---------------CHHHHHHHHHH-CCEEEecC---------------------------------CCCEEEEeCccc
Confidence 34568888866 49988611 258999999 89
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q 038499 505 YMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 505 ~~t~eeid~ll~al~~v~~~~ 525 (609)
++|++|+++++++|+++++..
T Consensus 441 ~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 441 YNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp TCCHHHHHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998754
No 11
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.5e-34 Score=306.77 Aligned_cols=371 Identities=16% Similarity=0.107 Sum_probs=276.7
Q ss_pred HHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCc-cCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 038499 55 LTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFY-GNTHTCDSYVGQHTTNMVHEASNYIKKC 133 (609)
Q Consensus 55 ~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~-~n~~~~~~~~~~~~~~~~~e~r~~ia~~ 133 (609)
++.+|++|+..+ +.+|+|+++.++.|+.|.+++.+.+.... .++.+ +...........++++.++++
T Consensus 4 ~~~~r~~f~~~~----------~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~y~~~~~~~~~l~~~la~~ 71 (390)
T 1elu_A 4 ITPSLHQFPGLA----------NKTYFNFGGQGILPTVALEAITAMYGYLQENGPFS--IAANQHIQQLIAQLRQALAET 71 (390)
T ss_dssp ------CCGGGT----------TSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCCC----------CeEEecCCccCCCCHHHHHHHHHHHHHHhccCCcc--hhhHHHHHHHHHHHHHHHHHH
Confidence 467888887543 57999999999999999999988775421 12221 111112246788999999999
Q ss_pred hCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEe
Q 038499 134 LGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIG 209 (609)
Q Consensus 134 ~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~ 209 (609)
+|++++ +|++| +|+++++..++..+. +++|| .|+++..+|+++...| +..|++++.++
T Consensus 72 ~g~~~~-~v~~~-~g~t~a~~~~~~~~~--------------~~~gd--~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 133 (390)
T 1elu_A 72 FNVDPN-TITIT-DNVTTGCDIVLWGLD--------------WHQGD--EILLTDCEHPGIIAIVQAIAARFGITYRFFP 133 (390)
T ss_dssp TTSCGG-GEEEE-SSHHHHHHHHHHHSC--------------CCTTC--EEEEETTCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred cCCCHH-HEEEe-CChHHHHHHHHhCCC--------------CCCCC--EEEEecCcccHHHHHHHHHHHHhCcEEEEEc
Confidence 998776 89998 677778888888763 36788 6999999999987664 45699999999
Q ss_pred cC--CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHH----HhCCeEEEeccccCCcccccCCC
Q 038499 210 LD--DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLH----QYGGFACFDFAASGPYVEIDVRS 283 (609)
Q Consensus 210 ~~--~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~----~~g~~vivD~A~~~~~~~id~~~ 283 (609)
.+ .++.+|+++|+++++ ++++++++++++||||.+.|+++|.++|+ +||+++|+|++++.+..++++..
T Consensus 134 ~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~ 208 (390)
T 1elu_A 134 VAATLNQGDAAAVLANHLG-----PKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSR 208 (390)
T ss_dssp CGGGSSSSCHHHHHHTTCC-----TTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTT
T ss_pred CCCCCCccchHHHHHHhcC-----CCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhh
Confidence 87 577899999999997 57999999999999999999999999999 99999999999998877776654
Q ss_pred CCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH
Q 038499 284 GQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI 363 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~ 363 (609)
. +.|++++|+|||++||.|+|++++++++ ++.+.+...|++++..... .. ...+.+...++..++++.....
T Consensus 209 ~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~--~~~~~~~~~g~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~ 280 (390)
T 1elu_A 209 L---EVDYYAFTGHKWFAGPAGVGGLYIHGDC--LGEINPTYVGWRSITYGAK--GE-PTGWAEGGKRFEVATSAYPQYA 280 (390)
T ss_dssp S---CCSEEEEESSSTTCCCTTCEEEEECTTT--GGGCCCCSCCTTTEEECTT--SC-EEEECSGGGGGCCSCCCHHHHH
T ss_pred c---CCCEEEccccccccCCCceEEEEECHHh--HhhcCCccccCCccccccc--Cc-ccccccchHhhCCCCCCHHHHH
Confidence 3 6899999999988888889999999988 5566666666665433211 00 0011112245556777765543
Q ss_pred --HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 364 --RAALAFWVKEYIG-HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 364 --~aal~~~~~~~~g-~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
.+++.++ +..+ .+.+.++.+++++++.+.|+++++++++.+. ....++++|.+.. + .
T Consensus 281 a~~~al~~l--~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~~-~----------------~ 340 (390)
T 1elu_A 281 GLLAALQLH--QRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATS-APQAGLVSFTVDS-P----------------L 340 (390)
T ss_dssp HHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSS-CCSSSEEEEEECS-S----------------S
T ss_pred HHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCc-cccccEEEEEcCC-C----------------C
Confidence 3344433 2334 8889999999999999999988899988642 2356677775533 1 3
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
+...+.+.|.+ .||.+++|. .++++||+++++++++|+++++++|++
T Consensus 341 ~~~~~~~~l~~-~gi~v~~~~--------------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 341 GHRAIVQKLEE-QRIYLRTIA--------------------------------DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp CHHHHHHHHHH-TTEECEEET--------------------------------TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHH-CCEEEEecC--------------------------------CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 57788888865 599998653 047999999999999999999999875
Q ss_pred H
Q 038499 521 I 521 (609)
Q Consensus 521 v 521 (609)
+
T Consensus 388 ~ 388 (390)
T 1elu_A 388 F 388 (390)
T ss_dssp C
T ss_pred h
Confidence 4
No 12
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=1.4e-36 Score=322.32 Aligned_cols=347 Identities=14% Similarity=0.093 Sum_probs=240.8
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCC--CchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTC--DSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~--~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.+|+|+++.++.|+.|.+++.+.+..+++|+.+. .+..+....+.++++|+.+++++|++++++|+|+.+|+|++++.
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ 106 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAG 106 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHH
Confidence 3799999999999999999999888877777652 13456667889999999999999996544799942455667888
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecC--CCCC-CCHHHHHHHHhhhcc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLD--DDGL-LDIEALRSKLELYKD 230 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~--~~g~-ld~e~L~~al~~~~~ 230 (609)
++..+ +++||+ |++...+|+++. ..++..| +|+.++.+ ++|. +++++++.+++
T Consensus 107 ai~~l---------------~~~gd~--v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~---- 164 (386)
T 3qm2_A 107 VPLNL---------------LGDKTT--ADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS---- 164 (386)
T ss_dssp HHHHH---------------CTTCCE--EEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC----
T ss_pred HHHhc---------------cCCCCe--EEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC----
Confidence 87655 468884 444444555542 1223468 89999988 5675 78888887777
Q ss_pred CCCceEEEEecccCccccc-cCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEE
Q 038499 231 AKRPILGSFSACSNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGIL 309 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~-~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L 309 (609)
++|++|++++++|.||.+ .|+++|+ +|+++++|++|++|+.++|+.++ |++++|+|||+| |.|+|+|
T Consensus 165 -~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~lG-P~G~g~l 232 (386)
T 3qm2_A 165 -DNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNIG-PAGLTLV 232 (386)
T ss_dssp -TTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTTC-CTTEEEE
T ss_pred -CCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEecccccC-CCccEEE
Confidence 689999999999999996 8999886 79999999999999999999875 578899999995 9999999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEETYI 388 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~~l~ 388 (609)
++++++ ++.+.|..+. . ..|....+.....|||++.+++..+.++...... |++.+.+++++++
T Consensus 233 ~v~~~~--~~~~~~~~p~--~-----------~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~ 297 (386)
T 3qm2_A 233 IVREDL--LGKAHESCPS--I-----------LDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKA 297 (386)
T ss_dssp EEEGGG--CSCCCTTSCG--G-----------GCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EECHHH--HhhhcccCCc--H-----------HHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999 6666554221 0 0011112334556898877765433333322455 7999999999999
Q ss_pred HHHHHHhCCCCce-EEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 389 ERALERLLPNQNI-KILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 389 ~~~~~~L~~~p~i-~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+++++.|+++ ++ ....+ ...|++ +++|.+.. .. ++ ..+.+.| +.+||.++.|..|.
T Consensus 298 ~~l~~~l~~~-~~~~~~~~-~~~rs~~iv~f~~~~-~~---------------~~-~~~~~~L-~~~gI~~~~g~~~~-- 355 (386)
T 3qm2_A 298 ELLYGVIDNS-DFYRNDVA-QANRSRMNVPFQLAD-NT---------------LD-KVFLEES-FAAGLHALKGHRVV-- 355 (386)
T ss_dssp HHHHHHHHTC-SSEECCBC-GGGBCSSEEEEEESS-GG---------------GH-HHHHHHH-HHTTEECCBCCTTT--
T ss_pred HHHHHHHHHC-CCcccCCC-HHHcCceEEEEECCC-cc---------------cc-HHHHHHH-HHCCCEEeCCCCCc--
Confidence 9999999988 44 33222 224554 78888864 11 34 5666667 45799998775442
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+.+|+|+++++|++||++++++|++++++
T Consensus 356 -----------------------------~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 356 -----------------------------GGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp -----------------------------CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 45999999999999999999999998764
No 13
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.4e-34 Score=302.16 Aligned_cols=365 Identities=14% Similarity=0.106 Sum_probs=270.6
Q ss_pred HHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 038499 56 TWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG 135 (609)
Q Consensus 56 ~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g 135 (609)
..+|++|+... +.+|+|+.+.++.++.+.+++.+.+.. + .+......++++++++++++|
T Consensus 8 ~~~r~~f~~~~----------~~~~l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g 67 (386)
T 2dr1_A 8 EAFKEVYEMVK----------PKYKLFTAGPVACFPEVLEIMKVQMFS-----H-----RSKEYRKVHMDTVERLREFLE 67 (386)
T ss_dssp HHHHHHHHHHS----------CCSEECCSSSCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcC----------ccceeecCCCcCCcHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhC
Confidence 67888887432 347999999999999888887654421 1 123347788999999999999
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc--hHHHHHHcCceEEEEecCCC
Q 038499 136 GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS--NLLSWRQSLAEVVEIGLDDD 213 (609)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s--~~~~~~~~G~~vv~v~~~~~ 213 (609)
.+..+++++| +|+++++..++.++ +++|| .|+++.+.|++ +...++..|++++.++.+.+
T Consensus 68 ~~~~~~v~~~-~g~t~a~~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 68 VEKGEVLLVP-SSGTGIMEASIRNG---------------VSKGG--KVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp CSSSEEEEES-SCHHHHHHHHHHHH---------------SCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred CCCCcEEEEe-CChHHHHHHHHHHh---------------hcCCC--eEEEEcCCchhHHHHHHHHHhCCceEEEecCCC
Confidence 9722368888 67777888888776 36888 69999999998 66667788999999999888
Q ss_pred CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEE
Q 038499 214 GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIF 293 (609)
Q Consensus 214 g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~ 293 (609)
+.+|+++|++++++. ++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|+++
T Consensus 130 ~~~d~~~l~~~l~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~ 203 (386)
T 2dr1_A 130 KAVKPEDLDDALRKN---PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW---GLDVVF 203 (386)
T ss_dssp CCCCHHHHHHHHHHC---TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEE
T ss_pred CCCCHHHHHHHHhcC---CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc---CCcEEE
Confidence 889999999999531 47899999999999999999999999999999999999999988766665543 689999
Q ss_pred EcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc-ccccCCChhHHHHH--HHHHHHH
Q 038499 294 LSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE-ERESGGTPQVIQMI--RAALAFW 370 (609)
Q Consensus 294 ~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~-~r~~~gtp~i~~~~--~aal~~~ 370 (609)
+|+||++++|.|+|++++++++ ++.+.+....+.. .+...++.... .+...++++..... .+++..+
T Consensus 204 ~s~sK~~~~~~g~G~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 273 (386)
T 2dr1_A 204 SSSQKAFGVPPGLAIGAFSERF--LEIAEKMPERGWY--------FDIPLYVKYLKEKESTPSTPPMPQVFGINVALRII 273 (386)
T ss_dssp EETTSTTCCCSSCEEEEECHHH--HHHHTTCTTCCST--------TCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHH
T ss_pred EeccccccCCCceEEEEECHHH--HHHHhcCCCCceE--------EeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999988789999999987 3333322111111 00000111111 22345565554433 3334332
Q ss_pred HHHhc-CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 371 VKEYI-GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 371 ~~~~~-g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
+.. +.+.+.++.+++++++.+.|+++ ++++..+.......++++.+.. + .+...+.+.|
T Consensus 274 --~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~l 333 (386)
T 2dr1_A 274 --EKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPP-G----------------IKGDEVYEAM 333 (386)
T ss_dssp --HHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCT-T----------------CCHHHHHHHH
T ss_pred --HHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCC-C----------------CCHHHHHHHH
Confidence 344 68889999999999999999887 7877765321133455555542 1 3577889989
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++ ||.+++|..+. .++++||+++.+++++|+++++++|+++++.
T Consensus 334 ~~~-gi~v~~~~~~~-----------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 334 RKR-GFELAKGYGSV-----------------------------KEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp HHT-TEECEECCGGG-----------------------------TTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHC-CeEEecCcccc-----------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 775 99999776321 1479999999999999999999999998765
No 14
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=6.2e-34 Score=302.74 Aligned_cols=357 Identities=11% Similarity=0.053 Sum_probs=263.3
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+|+|+++.++.++.|.+++.+.+. + + .+........++++.+++++|++++ +|++| +|+++++..+
T Consensus 8 ~~~yl~~~~~~~~~~~v~~a~~~~~~----~-~-----~~~~~~~~~~~l~~~la~~~g~~~~-~v~~t-~g~t~a~~~~ 75 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPEVLRGLGRTVL----Y-D-----YDPAFQLLYEKVVDKAQKAMRLSNK-PVILH-GEPVLGLEAA 75 (392)
T ss_dssp CCSEECSSSCCCCCHHHHHHTTSCCC----C-T-----TSHHHHHHHHHHHHHHHHHTTCSSC-CEEES-SCTHHHHHHH
T ss_pred CcceeecCCCcCCCHHHHHHHhcccc----c-c-----ccHHHHHHHHHHHHHHHHHhCCCCC-EEEEe-CCchHHHHHH
Confidence 56899999999999998888766543 1 2 2334567788999999999999765 89998 6667788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
+..+ +++|| .|+++..+|+++. ...+..|++++.++.++++.+|+++|++++++. +++
T Consensus 76 ~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~ 135 (392)
T 2z9v_A 76 AASL---------------ISPDD--VVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH---PEI 135 (392)
T ss_dssp HHHH---------------CCTTC--CEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC---TTC
T ss_pred HHHh---------------cCCCC--EEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC---CCC
Confidence 7776 36888 5888899998863 223457999999999888889999999999631 478
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||+++||.|+|+++++++
T Consensus 136 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~G~l~~~~~ 212 (392)
T 2z9v_A 136 TVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC---KADIYVTGPNKCLGAPPGLTMMGVSER 212 (392)
T ss_dssp CEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG---TCSEEEECSSSTTCCCSCCEEEEECHH
T ss_pred cEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc---cceEEEecCcccccCCCceeEEEECHH
Confidence 99999999999999999999999999999999999999988776666543 689999999999888888999999988
Q ss_pred hhccCCCCCCccCCCceEeeccccccccccccc-ccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED-IEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~-~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+. +.+.+...|.+. + ......++.. .......++++..+.. .+++..+ +..|.+.+.++.+++++++
T Consensus 213 ~~--~~l~~~~~g~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 213 AW--AKMKANPLAPRA--S----MLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLY--LNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp HH--HHHHTCTTSCCS--S----TTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHH
T ss_pred HH--HHhhhccCCCCc--e----eccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHH
Confidence 73 333222111000 0 0000000010 0123446777766544 3444443 3457888899999999999
Q ss_pred HHHhCCCCceEEeCCCCC-CCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 392 LERLLPNQNIKILGNTST-KRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~-~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
.+.|+++ +++++.+... ....++++.+.. + .+...+.+.|.+++||.+++|..+.
T Consensus 283 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~l~~~L~~~~gi~v~~g~~~~------ 338 (392)
T 2z9v_A 283 RAGVTAM-GLSVWAASDSIASPTTTAVRTPD-G----------------VDEKALRQAARARYGVVFSSGRGET------ 338 (392)
T ss_dssp HHHHHHT-TCCBSSSSGGGBCTTEEEEECCT-T----------------CCHHHHHHHHHHHHCEECEECCGGG------
T ss_pred HHHHHHc-CCeeccCCccccCCceEEEECCC-C----------------CCHHHHHHHHHhcCCEEEecCCCCC------
Confidence 9999887 8877763211 134455665532 1 3577899988776699999876421
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhc
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||++ +++++++|+++++++|+++++..
T Consensus 339 -----------------------~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 339 -----------------------LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp -----------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 248999996 55899999999999999998754
No 15
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=1.1e-33 Score=303.51 Aligned_cols=372 Identities=17% Similarity=0.180 Sum_probs=268.1
Q ss_pred HHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHH
Q 038499 53 KKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKK 132 (609)
Q Consensus 53 ~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~ 132 (609)
+.++.+|++|+... +.+|+|+++.++.|+.|.+++.+.+...++++... +...........++++++++
T Consensus 14 ~~~~~~r~~f~~~~----------~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~ 82 (416)
T 1qz9_A 14 DSLAPLRQQFALPE----------GVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIR-SWNSAGWRDLSERLGNRLAT 82 (416)
T ss_dssp CTTGGGGGGBCCCT----------TCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGG-HHHHTSGGGHHHHHHHHHHT
T ss_pred chhHHHHHhCCCCC----------CeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCcc-ccchhhHHHHHHHHHHHHHH
Confidence 34567888887442 68999999999999999999999887555554321 11111223667889999999
Q ss_pred HhCCCCCCcEEEeCChHHHHHHHHHHHh-cccchhhHHHHHHhhh----cCCCceEEEECCCCccchHHHHHH----c--
Q 038499 133 CLGGGQEDAMIFCGSGTTAAIKRLQEVM-GIAVPSILREKLIKCL----RDEERWVVFVGPHEHHSNLLSWRQ----S-- 201 (609)
Q Consensus 133 ~~g~~~~~~vift~sGttaal~~l~~~l-~~~~~~~~~~~~~~~l----~~gd~~~Vlv~~~~h~s~~~~~~~----~-- 201 (609)
++|++++ +|+|| +|+++++..++..+ . + ++||+ +|++++.+|+++..++.. .
T Consensus 83 ~~g~~~~-~v~~~-~g~t~al~~al~~~~~--------------~~~~~~~gd~-vii~~~~~~~~~~~~~~~~~~~~~~ 145 (416)
T 1qz9_A 83 LIGARDG-EVVVT-DTTSINLFKVLSAALR--------------VQATRSPERR-VIVTETSNFPTDLYIAEGLADMLQQ 145 (416)
T ss_dssp TTTCCTT-SEEEC-SCHHHHHHHHHHHHHH--------------HHHHHSTTCC-EEEEETTSCHHHHHHHHHHHHHHCS
T ss_pred HcCCCcc-cEEEe-CChhHHHHHHHHhhcc--------------cccccCCCCc-EEEEcCCCCCchHHHHHHHHHHhcC
Confidence 9999765 89998 66777787666553 1 2 57774 678888899987766543 3
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccC
Q 038499 202 LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV 281 (609)
Q Consensus 202 G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~ 281 (609)
|++++.++. +++|+++|+ ++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++
T Consensus 146 g~~~~~v~~-------~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 213 (416)
T 1qz9_A 146 GYTLRLVDS-------PEELPQAID-----QDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDL 213 (416)
T ss_dssp SCEEEEESS-------GGGHHHHCS-----TTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCH
T ss_pred CceEEEeCc-------HHHHHHHhC-----CCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCCh
Confidence 999999986 788888887 57999999999999999999999999999999999999999988776655
Q ss_pred CCCCCCCccEEEEcCCCCCCCCCCc-EEEEEechhhccCCCCCCccCC-CceEeecccccccccccccccccccCCChhH
Q 038499 282 RSGQTDGYDAIFLSTHKFLGGPGSP-GILLMTKALYQLGSFPPSTCGG-GTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 282 ~~~~~~~~D~v~~S~hK~lggp~g~-G~L~~~~~~~~l~~~~p~~~gg-g~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
... +.|++++|+||+++++.++ |++++++++ ++.+.+...|+ +.. ..+.......+.....+...++++.
T Consensus 214 ~~~---~~d~~~~s~~K~l~~g~~~~g~l~~~~~~--~~~l~~~~~g~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (416)
T 1qz9_A 214 HQA---GADYAIGCTYKYLNGGPGSQAFVWVSPQL--CDLVPQPLSGWFGHS---RQFAMEPRYEPSNGIARYLCGTQPI 285 (416)
T ss_dssp HHH---TCSEEEECSSSTTCCCTTCCCEEEECTTT--TTTSCCSCCCGGGBC---TTSCCCSSCCBCSSGGGGCCSCCCH
T ss_pred hhc---CCCEEEecCcccCCCCCCCeEEEEECHHH--HhccCCCccccCccc---cccCCCCccCCCcchHHhcCCCCCH
Confidence 433 5799999999998655566 999999998 55666554442 110 0011000111112234556778877
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC-C--ceEEeCCCCC-CCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN-Q--NIKILGNTST-KRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~-p--~i~v~~~~~~-~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
.+...+..++......+.+.+.++.+++++++.+.|.++ | +++++.+... .+.+++++.+ +
T Consensus 286 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------------- 350 (416)
T 1qz9_A 286 TSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEH-P-------------- 350 (416)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEEC-T--------------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEec-C--------------
Confidence 665433222222234678899999999999999999875 6 8888876321 1345544443 2
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC-CCCCHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP-YYMSNEEFEFT 514 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~-~~~t~eeid~l 514 (609)
+...+.+.|.+ .||.++.. .++++||+++ +++|++|++++
T Consensus 351 -----~~~~l~~~l~~-~gi~~~~~---------------------------------~~~~lRis~~~~~~t~~~i~~~ 391 (416)
T 1qz9_A 351 -----EGYAVIQALID-RGVIGDYR---------------------------------EPRIMRFGFTPLYTTFTEVWDA 391 (416)
T ss_dssp -----THHHHHHHHHT-TTEECEEE---------------------------------TTTEEEEECCTTTCCHHHHHHH
T ss_pred -----CHHHHHHHHHh-CCcEeccC---------------------------------CCCeEEEeCcccCCCHHHHHHH
Confidence 25678888866 49986410 1489999997 59999999999
Q ss_pred HHHHHHHHHhcc
Q 038499 515 LEALEFIAIYGQ 526 (609)
Q Consensus 515 l~al~~v~~~~~ 526 (609)
+++|+++++...
T Consensus 392 ~~~l~~~~~~~~ 403 (416)
T 1qz9_A 392 VQILGEILDRKT 403 (416)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHhccc
Confidence 999999987643
No 16
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=4.2e-33 Score=300.65 Aligned_cols=373 Identities=20% Similarity=0.220 Sum_probs=271.7
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
..+|||+++.++.++.|.+++.+.+...+++++.. +..+....+...++++++++++|++++ +|+|| +|+++++..+
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~ 94 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSS-YVAGRKAKDIINTARASLAKMIGGKPQ-DIIFT-SGGTESNNLV 94 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCS-SHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCHHHHHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccC-cHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEe-CChHHHHHHH
Confidence 57999999999999999999999887666777753 455666778899999999999999766 89998 7777788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCc-----------eEEEECCCCccchHHHHHH----cCceEEEEecCC-CCCCCHHH
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEER-----------WVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLDD-DGLLDIEA 220 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~-----------~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~~-~g~ld~e~ 220 (609)
+..+.... ....+++||+ ..|+++..+|+++..+|.. .|++++.++.++ ++.+|+++
T Consensus 95 ~~~~~~~~-------~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~ 167 (432)
T 3a9z_A 95 IHSTVRCF-------HEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVED 167 (432)
T ss_dssp HHHHHHHH-------HHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHH
T ss_pred HHHHHhhh-------hhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHH
Confidence 77652000 0000124531 2688889999998877754 589999999986 78899999
Q ss_pred HHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC----------CeEEEeccccCCcccccCCCCCCCCcc
Q 038499 221 LRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG----------GFACFDFAASGPYVEIDVRSGQTDGYD 290 (609)
Q Consensus 221 L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g----------~~vivD~A~~~~~~~id~~~~~~~~~D 290 (609)
|+++++ ++++++++++++||||.+.|+++|.++|+++| +++|+|++++.+..++++... +.|
T Consensus 168 l~~~i~-----~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d 239 (432)
T 3a9z_A 168 ILAAVR-----PTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVD 239 (432)
T ss_dssp HHHTCC-----TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCS
T ss_pred HHHhcc-----CCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCC
Confidence 999998 57999999999999999999999999999999 999999999888766665443 679
Q ss_pred EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHH
Q 038499 291 AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALA 368 (609)
Q Consensus 291 ~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~ 368 (609)
++++|+||++| |. +|+++++++.. ...+.+...|++. ..+...++++..... .+++.
T Consensus 240 ~~~~s~~K~~g-~~-~G~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~aal~ 298 (432)
T 3a9z_A 240 FLTIVGHKFYG-PR-IGALYVRGVGK-LTPLYPMLFGGGQ------------------ERNFRPGTENTPMIAGLGKAAD 298 (432)
T ss_dssp EEEEEGGGTTC-CS-CEEEEETTBTT-TBCCCCSCCSSCG------------------GGGTSCSCCCHHHHHHHHHHHH
T ss_pred EEEEehhHhcC-Cc-ceEEEEccccc-cCCcCceeecCCc------------------cccccCCCcCHHHHHHHHHHHH
Confidence 99999999985 77 89999998751 2345555555443 234556777665543 33444
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE--EeCCC-CCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHH
Q 038499 369 FWVKEYIGHEVIKKQEETYIERALERLLPNQNIK--ILGNT-STKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPF 444 (609)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~--v~~~~-~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 444 (609)
+. + .+.+.+.++.+++++++.+.|+++++++ +.++. ...+.+ +++|.+.. .. .+...
T Consensus 299 ~~--~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~ 359 (432)
T 3a9z_A 299 LV--S-ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQG-SQ---------------LRGYM 359 (432)
T ss_dssp HH--H-HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECS-TT---------------CCHHH
T ss_pred HH--H-hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCC-CC---------------CcHHH
Confidence 43 2 2578888999999999999998765543 33431 112344 66666653 11 23455
Q ss_pred HHHHHhhhcCcEeccCcccCChh----hhhhc--CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 445 VATLLNDLFGIQARGGCACAGPY----GHHLL--DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 445 v~~~L~~~~GI~v~~G~~ca~p~----~~~ll--~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
+.+.| .+|.++.|..|...+ .+.+. |+... ..++++|||++.++|++|+++++++|
T Consensus 360 ~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~---------------~~~~~iRis~~~~~t~eei~~~~~~l 421 (432)
T 3a9z_A 360 VLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVD---------------VARNAVRLSVGRSTTRAEVDLIVQDL 421 (432)
T ss_dssp HHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHH---------------HHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCcc---------------ccCceEEEEcCCCCCHHHHHHHHHHH
Confidence 65554 389999998887321 01111 22110 01489999999999999999999999
Q ss_pred HHHHHhc
Q 038499 519 EFIAIYG 525 (609)
Q Consensus 519 ~~v~~~~ 525 (609)
+++++..
T Consensus 422 ~~~~~~~ 428 (432)
T 3a9z_A 422 KQAVNQL 428 (432)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987654
No 17
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=6.8e-33 Score=294.76 Aligned_cols=355 Identities=12% Similarity=0.099 Sum_probs=260.9
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+|+++.+..+.++.|.+++.+.+.. + + .........++++++++++|.+++++|++| +|+++++..+
T Consensus 18 ~~~~~~~~g~~~~~~~v~~a~~~~~~~-----~---~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a~~~~ 86 (393)
T 2huf_A 18 PNKLLMGPGPSNAPQRVLDAMSRPILG-----H---L--HPETLKIMDDIKEGVRYLFQTNNIATFCLS-ASGHGGMEAT 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTSCCCC-----T---T--SHHHHHHHHHHHHHHHHHHTCCCSEEEEES-SCHHHHHHHH
T ss_pred CCeEEecCCCCCCCHHHHHHHHhhhcc-----C---C--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEc-CcHHHHHHHH
Confidence 456888887778888888887665432 1 1 223467789999999999999764378888 6777788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
+..+ +++|| .|+++..+|+++. ...+..|++++.++.++++.+|+++|++++++ .++
T Consensus 87 ~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~ 145 (393)
T 2huf_A 87 LCNL---------------LEDGD--VILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLI----HKP 145 (393)
T ss_dssp HHHH---------------CCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----HCC
T ss_pred HHHH---------------hCCCC--EEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhc----cCC
Confidence 8776 36888 6899989998853 22345799999999988888999999999983 278
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||+++||.|.|+++++++
T Consensus 146 ~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~sK~l~g~~G~G~~~~~~~ 222 (393)
T 2huf_A 146 SVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRW---EIDAMYTGSQKVLGAPPGITPVSFSHR 222 (393)
T ss_dssp SEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSSSTTCCCSSCEEEEECHH
T ss_pred cEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhc---CccEEEECCCcccccCCCeEEEEECHH
Confidence 99999999999999999999999999999999999999988777666543 689999999999888888999999987
Q ss_pred hhccCCCC-------CCccCCCceEeecccccccccccc-cccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 315 LYQLGSFP-------PSTCGGGTVNYVNGFNEKDTLYLE-DIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 315 ~~~l~~~~-------p~~~ggg~v~~~~~~~~~~~~~~~-~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
+. +.+. +...+++. ...|+. ....+...+++++.+...+..++......+.+.+.++.++
T Consensus 223 ~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 290 (393)
T 2huf_A 223 AV--ERYKRRNTKVKVYYWDMSL----------VGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHED 290 (393)
T ss_dssp HH--HHHHTCSSCCSCGGGCHHH----------HHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HH--HHHhhcCCCCceEEEchHH----------HHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 73 2221 11111000 000000 1123455678777765533222222233478888999999
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+++++.+.|+++ +++++.+.. .+.+ ++++.+.. + .+..++.+.|.+++||.+++|..|.
T Consensus 291 ~~~~l~~~L~~~-g~~~~~~~~-~~~~~~~~~~~~~-~----------------~~~~~~~~~L~~~~gi~v~~g~~~~- 350 (393)
T 2huf_A 291 CAKRLYRGLQDA-GFELYADPK-DRLSTVTTIKVPQ-G----------------VDWLKAAQYAMKTYLVEISGGLGPT- 350 (393)
T ss_dssp HHHHHHHHHHHT-TCCBSSCGG-GBCTTEEEEECCT-T----------------CCHHHHHHHHHHHHCEECBCCCGGG-
T ss_pred HHHHHHHHHHHc-CCeeccCcc-ccCCcEEEEEcCC-C----------------CCHHHHHHHHHHhCCEEEecCcccc-
Confidence 999999999887 787776521 1344 55555542 1 4577898888776799999876542
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.++++||++ ++.++++|+++++++|+++++...
T Consensus 351 ----------------------------~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 351 ----------------------------AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp ----------------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred ----------------------------cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 148999999 545689999999999999987644
No 18
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.1e-33 Score=296.82 Aligned_cols=367 Identities=15% Similarity=0.098 Sum_probs=261.2
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
.+|+++....+.++.+.+++.+.+.. + ..........++++.+++++|.+++.+|++| +|+++++..++
T Consensus 18 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~-~g~t~al~~~~ 86 (396)
T 2ch1_A 18 EKIMMGPGPSNCSKRVLTAMTNTVLS-----N-----FHAELFRTMDEVKDGLRYIFQTENRATMCVS-GSAHAGMEAML 86 (396)
T ss_dssp CCBCCSSSSCCCCHHHHHHTTSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHTCCCSCEEEES-SCHHHHHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhcccccc-----C-----CChhHHHHHHHHHHHHHHHhCCCCCcEEEEC-CcHHHHHHHHH
Confidence 44666666566777777776543321 1 1223345688999999999999764368888 67777888888
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
.++ +++|| .|+++.++|+++. ..++..|++++.++.+.++.+|+++|++++++ .+++
T Consensus 87 ~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~ 145 (396)
T 2ch1_A 87 SNL---------------LEEGD--RVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIEL----HQPK 145 (396)
T ss_dssp HHH---------------CCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHH----HCCS
T ss_pred HHh---------------cCCCC--eEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHh----CCCC
Confidence 776 37888 6899999999874 25577899999999988888999999999983 2789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
+|++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... ++|++++|+||++++|.|+|++++++++
T Consensus 146 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~ 222 (396)
T 2ch1_A 146 CLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW---EIDAVYTGAQKVLGAPPGITPISISPKA 222 (396)
T ss_dssp EEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCCEEECCCC-CCCCCSSCEEEEECHHH
T ss_pred EEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc---CcCEEEEcCCccccCCCCeEEEEECHHH
Confidence 9999999999999999999999999999999999999988777766554 6799999999999988889999999877
Q ss_pred hccCCCCCC--ccCCCceEeeccccccc-ccccc-cccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPS--TCGGGTVNYVNGFNEKD-TLYLE-DIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 316 ~~l~~~~p~--~~ggg~v~~~~~~~~~~-~~~~~-~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
. +.+... ..+.... .... ..++. ....+...++++...... +++... ...+.+.+.++.+++++
T Consensus 223 ~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~ 292 (396)
T 2ch1_A 223 L--DVIRNRRTKSKVFYW------DLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI--AEEGLENQIKRRIECAQ 292 (396)
T ss_dssp H--HHHHTCSSCCSCGGG------CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHH
T ss_pred H--HhhhhccCcccceEe------chHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHH
Confidence 3 222111 0010000 0000 00000 001234556766655433 333332 23578888999999999
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
++.+.|+++ +++++.+....+.+ ++++.+.. + .+...+.+.|.+++||.+++|..|.
T Consensus 293 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~L~~~~gi~v~~g~~~~---- 350 (396)
T 2ch1_A 293 ILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPK-G----------------VDWWKVSQYAMNNFSLEVQGGLGPT---- 350 (396)
T ss_dssp HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCT-T----------------CCHHHHHHHHHHHHCBCCBCCCGGG----
T ss_pred HHHHHHHHC-CCeeccCCccccCCceEEEEcCC-C----------------CCHHHHHHHHHHhCCEEEecCcccc----
Confidence 999999887 78777653212233 45555432 1 4678899888776799999776432
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhcccccCCCcccccCC
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAIYGQRFLPLYNFNIKTG 539 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~~~~~p~y~~~~~~~ 539 (609)
.++++||++ ++.++++|+++++++|+++++.. .+.|.|++.+|
T Consensus 351 -------------------------~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~---~~~~~~~~~~~ 394 (396)
T 2ch1_A 351 -------------------------FGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT---HPDYIFEESNG 394 (396)
T ss_dssp -------------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH---CTTCCCC----
T ss_pred -------------------------CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHh---CccEEeccccC
Confidence 148999999 56679999999999999998754 58899999875
No 19
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=1e-33 Score=297.70 Aligned_cols=345 Identities=11% Similarity=0.028 Sum_probs=254.4
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCC--chhhHHHHHHHHHHHHHHHHHhCCCCCCcEEE-eCChHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCD--SYVGQHTTNMVHEASNYIKKCLGGGQEDAMIF-CGSGTTAAIKR 155 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~--~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vif-t~sGttaal~~ 155 (609)
+|+=+.+.++.|+.|.+++.+.+..+++|+.+.. ++.+....+.++++|+.+++++|++++++|+| | +|+|++++.
T Consensus 6 ~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t-~~~T~a~n~ 84 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQ-GGASLQFAM 84 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEES-SHHHHHHHH
T ss_pred eEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEc-CcHHHHHHH
Confidence 4655677789999999999999988877765421 23466788999999999999999975448998 7 677778998
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCce-EEEECCCCccchHHHHHHcCceEEEEecCCCCC--CCHHHHHHHHhhhccCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERW-VVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGL--LDIEALRSKLELYKDAK 232 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~-~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~--ld~e~L~~al~~~~~~~ 232 (609)
++..+ + ++|+. +|+++..+|... ..++..|++|+.++.++++. +++++ + |+ +
T Consensus 85 ~~~~~---------------~-~~~~~~~i~~~~~~~~~~-~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~-----~ 139 (361)
T 3m5u_A 85 IPMNL---------------A-LNGVCEYANTGVWTKKAI-KEAQILGVNVKTVASSEESNFDHIPRV-E--FS-----D 139 (361)
T ss_dssp HHHHH---------------C-CSSCEEEEECSHHHHHHH-HHHHHTTCCEEEEEECTTTTSCSCCCC-C--CC-----T
T ss_pred HHHhc---------------C-CCCeEEEEeCCHHHHHHH-HHHHHcCCceEEEecccCcCCCcCChh-h--cC-----C
Confidence 87654 3 56642 355555555432 23355799999999988774 56666 3 76 6
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
+|++|+++|++|.||.+.|. | ++ +|+++++|++|++|+.++|+.. +|++++|+|||+| |.|+|+|+++
T Consensus 140 ~t~lv~~~~~e~~tG~~~~~--i---~~-~~~~~~vD~~q~~g~~~id~~~-----~d~~~~s~~K~~g-p~G~g~l~~~ 207 (361)
T 3m5u_A 140 NADYAYICSNNTIYGTQYQN--Y---PK-TKTPLIVDASSDFFSRKVDFSN-----IALFYGGVQKNAG-ISGLSCIFIR 207 (361)
T ss_dssp TSSEEEEESEETTTTEECSS--C---CC-CSSCEEEECGGGTTSSCCCCTT-----EEEEEEETTTTSS-CTTCEEEEEE
T ss_pred CCCEEEEeCCCCCcceeCCc--c---cc-cCCEEEEEcccccCCCCCCccc-----CCEEEEechhccC-CCccEEEEEc
Confidence 89999999999999999773 3 33 4999999999999999999974 5999999999995 9999999999
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEETYIERA 391 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~~l~~~~ 391 (609)
+++ ++.+.|.... .. ..|....+.....|||++.+++....++...... |++.+.++++++++++
T Consensus 208 ~~~--~~~~~~~~~p-~~-----------~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l 273 (361)
T 3m5u_A 208 KDM--LERSKNKQIP-SM-----------LNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATML 273 (361)
T ss_dssp HHH--HHHHHTCCCC-GG-----------GCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHH--HhhhcCCCCC-ce-----------eehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 998 4344331100 01 0011111234456899988876544444433667 8999999999999999
Q ss_pred HHHhCCCCce-EEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 392 LERLLPNQNI-KILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 392 ~~~L~~~p~i-~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.|++++++ .++.+. ..++ .+++|.+.. .. .++ ..+...|. ..||.++.|..+
T Consensus 274 ~~~L~~~~g~~~~~~~~-~~rs~~ivsf~~~~-~~--------------~~~-~~~~~~L~-~~gI~~~~g~~~------ 329 (361)
T 3m5u_A 274 YECIDLSNGFYKGHADK-KDRSLMNVSFNIAK-NK--------------DLE-PLFVKEAE-EAGMIGLKGHRI------ 329 (361)
T ss_dssp HHHHHTSTTSEEESSCG-GGBCSSEEEEEESS-CT--------------THH-HHHHHHHH-HTTEECCBCCTT------
T ss_pred HHHHHHCCCeeeccCCH-HHcCCeEEEEECCC-ch--------------hhh-HHHHHHHH-HCCCEEecCCCc------
Confidence 9999999876 665442 2344 478888763 10 023 46777774 569998866432
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+.+|+|++.++|++||++++++|+++.++
T Consensus 330 -------------------------~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 330 -------------------------LGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp -------------------------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 156999999999999999999999998865
No 20
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=8.4e-33 Score=294.26 Aligned_cols=347 Identities=17% Similarity=0.136 Sum_probs=258.4
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+|+|+.+.++.++.+.+++.+.+.. + .+....+.++++++++++++|.+++.+|++| +|+++++..+
T Consensus 33 ~~~~l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~al~~~ 101 (393)
T 1vjo_A 33 PSRLLLGPGPSNAHPSVLQAMNVSPVG-----H-----LDPAFLALMDEIQSLLRYVWQTENPLTIAVS-GTGTAAMEAT 101 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHHSSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSCEEEES-SCHHHHHHHH
T ss_pred ccceeccCCCCCCCHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CchHHHHHHH
Confidence 347999999999999998888665431 1 1233567889999999999999643278998 6777788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc--hHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS--NLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s--~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
+..+ +++|| .|++..+.|++ +...++..|++++.++.+.++.+|+++|++++++ .++
T Consensus 102 ~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~ 160 (393)
T 1vjo_A 102 IANA---------------VEPGD--VVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALET----HRP 160 (393)
T ss_dssp HHHH---------------CCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----HCC
T ss_pred HHhc---------------cCCCC--EEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhh----CCc
Confidence 8776 36888 68998999998 6777788899999999988888999999999983 178
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA 314 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~ 314 (609)
+++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||++++|+++|+++++++
T Consensus 161 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~di~~~s~sK~l~~~~~~G~l~~~~~ 237 (393)
T 1vjo_A 161 AILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW---GVDLAYSCSQKGLGCSPGASPFTMSSR 237 (393)
T ss_dssp SEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCSCSSCEEEEECHH
T ss_pred eEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc---CccEEEEcCcccccCCCceEEEEECHH
Confidence 89999999999999999999999999999999999999988777666543 789999999999999989999999988
Q ss_pred hhccCCC-------CCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHH
Q 038499 315 LYQLGSF-------PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 315 ~~~l~~~-------~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+. +.+ .+...+.. +. ..|. ...+...|+++..... .+++... ...+.+.+.++.+
T Consensus 238 ~~--~~~~~~~~~~~~~~~~~~---~~-------~~~~--~~~~~~~g~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~ 301 (393)
T 1vjo_A 238 AI--EKLQRRRTKVANWYLDMN---LL-------GKYW--GSERVYHHTAPINLYYALREALRLI--AQEGLANCWQRHQ 301 (393)
T ss_dssp HH--HHHHTCSSCCSCSTTCHH---HH-------HHHH--STTCCCCSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHH
T ss_pred HH--HHHhccCCCCCceecCcH---hh-------hhhh--ccCCCCCCCCCHHHHHHHHHHHHHH--HHccHHHHHHHHH
Confidence 73 222 11111000 00 0000 0112333465555433 3334332 3447888999999
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
++++++.+.|+++ +++++.+.. ... .++++.+.. + .+...+.+.|.+++||.+++|..|.
T Consensus 302 ~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~~~~~~~~-~----------------~~~~~~~~~l~~~~gi~v~~g~~~~ 362 (393)
T 1vjo_A 302 KNVEYLWERLEDI-GLSLHVEKE-YRLPTLTTVCIPD-G----------------VDGKAVARRLLNEHNIEVGGGLGEL 362 (393)
T ss_dssp HHHHHHHHHHHHT-TCCBSSCGG-GBCSSEEEEECCT-T----------------CCHHHHHHHHHHHHCEECEECCGGG
T ss_pred HHHHHHHHHHHHc-CCcccCCcc-ccCCcEEEEEcCC-C----------------CCHHHHHHHHHhhCCEEEecCcccc
Confidence 9999999999887 787776531 112 344554432 1 3577899989776799999887543
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~ 522 (609)
.++++||++ ++.++++++++++++|++++
T Consensus 363 -----------------------------~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 363 -----------------------------AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp -----------------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 148999995 55667888999999998875
No 21
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=1.9e-32 Score=292.95 Aligned_cols=364 Identities=15% Similarity=0.124 Sum_probs=264.3
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
.|+......+.++.|.+++.+.+.. + ........+.++++++++++|.+.++.+++++ |+++++..++.
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~-sgt~al~~~~~ 82 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIG-----Q-----YDPAMTHYMNEVMALYRGVFRTENRWTMLVDG-TSRAGIEAILV 82 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHTCCCSEEEEEES-CHHHHHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccc-----c-----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEECC-CcHHHHHHHHH
Confidence 3555555566677787777654321 1 12334578899999999999998763478884 45557777777
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccc--hHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS--NLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s--~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
.+ +++|| .|+++..+|++ ....++..|++++.++.+.++.+|+++|++++++ .++++
T Consensus 83 ~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~ 141 (411)
T 3nnk_A 83 SA---------------IRPGD--KVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKR----IRPRL 141 (411)
T ss_dssp HH---------------CCTTC--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----HCCSE
T ss_pred Hh---------------cCCCC--EEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhh----CCCeE
Confidence 65 47888 69999999988 5666778899999999988899999999999984 37999
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY 316 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~ 316 (609)
+++++++|+||.+.|+++|.++|++||+++|+|++++.+..++++... ++|++++|+||+++||.|+|++++++++.
T Consensus 142 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~ 218 (411)
T 3nnk_A 142 LLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVW---GLDAVSAGMQKCLGGPSGTSPITLSARME 218 (411)
T ss_dssp EEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSTTTTCCCSSEEEEEECHHHH
T ss_pred EEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhcc---CCcEEEecCccccCCCCceEEEEECHHHH
Confidence 999999999999999999999999999999999999988887777654 78999999999988888999999998873
Q ss_pred c-cCC---CCCCccCCCceEeeccccccccccccc-------ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 317 Q-LGS---FPPSTCGGGTVNYVNGFNEKDTLYLED-------IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 317 ~-l~~---~~p~~~ggg~v~~~~~~~~~~~~~~~~-------~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
. +.. +.+.+.|++...... ......|++. ...+...+++++.....+..++......|.+.+.++.+
T Consensus 219 ~~~~~~~~~~~~~~g~~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 296 (411)
T 3nnk_A 219 EAIRRRKCVEEGIRTDAHRDGDE--EMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHK 296 (411)
T ss_dssp HHHHTTCCCCGGGCCTTCCCCSS--CCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHhhcccccccccccccccccC--CCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 2 111 223333332211000 0001111111 13345667877766554333333334557889999999
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.+.|+++ +++++.+.......++++.+.. + .+..++.+.|.+++||.+++|..
T Consensus 297 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~l~~~l~~~~gi~v~~g~~--- 355 (411)
T 3nnk_A 297 LHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQ-G----------------INGDQARKLMLEDFGIEIGTSFG--- 355 (411)
T ss_dssp HHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCT-T----------------CCHHHHHHHHHHHHSEEEEECCG---
T ss_pred HHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCC-C----------------CCHHHHHHHHHHhcCeEEeCccC---
Confidence 9999999999887 7887765321223445555432 1 46788999887777999997631
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+. .++++||++ ++.++++|+++++++|+++++...
T Consensus 356 ~~--------------------------~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 356 PL--------------------------HGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp GG--------------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CC--------------------------CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 10 257999998 777799999999999999987643
No 22
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=4.2e-32 Score=283.91 Aligned_cols=340 Identities=16% Similarity=0.042 Sum_probs=255.2
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
|+.+.+..+.++.+.+++.+.+.. + .+........++++++++++|++++ ++++| +|+++++..++..
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~-~i~~~-~g~t~a~~~~~~~ 70 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLH-----H-----RTEAAREVFLKARGLLREAFRTEGE-VLILT-GSGTLAMEALVKN 70 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCSSE-EEEEE-SCHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCC-----c-----cCHHHHHHHHHHHHHHHHHhCCCCc-eEEEc-CchHHHHHHHHHh
Confidence 677777788889999998776531 1 2334567788999999999999865 89998 6777788888877
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+ +++|| .|+++..+|+++. ..++..|++++.++.+.++.+|+++|++ ++++++
T Consensus 71 ~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~--------~~~~~v 125 (352)
T 1iug_A 71 L---------------FAPGE--RVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK--------EGYAGL 125 (352)
T ss_dssp H---------------CCTTC--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC--------SSCSEE
T ss_pred c---------------cCCCC--eEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc--------cCCcEE
Confidence 6 36888 6999999999975 2335579999999998888889888765 268899
Q ss_pred EEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~ 315 (609)
++++++||||.+.|+++|.++|++| |+++|+|++++.+..++++... +.|++++|+||+++||.|+|+++++++.
T Consensus 126 ~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~ 202 (352)
T 1iug_A 126 LLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM---GVDAAASGSQKGLMCPPGLGFVALSPRA 202 (352)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG---TCSEEEEESSSTTCCCSCEEEEEECHHH
T ss_pred EEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceecccc---CeeEEEecCcccccCCCceeEEEECHHH
Confidence 9999999999999999999999999 9999999999887776665543 6899999999988888889999999987
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALE 393 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~ 393 (609)
++.+.+ ++.. .+...++.....+...++++..... .+++... +.. .+.+.++.+++++++.+
T Consensus 203 --~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~-~~~~~~~~~~~~~~l~~ 266 (352)
T 1iug_A 203 --LERLKP---RGYY--------LDLARELKAQKEGESAWTPAINLVLAVAAVLEEV--LPR-LEEHLALKAWQNALLYG 266 (352)
T ss_dssp --HHTCCC---CSST--------TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--GGG-HHHHHHHHHHHHHHHHH
T ss_pred --HHHhhC---CCce--------eeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHH
Confidence 344433 1100 0001111111223445676665543 3344432 233 77888899999999999
Q ss_pred HhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 394 RLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 394 ~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
.|+++ +++++.+. ....++++.+.. + .+..++.+.|.++ ||.+++|..+.
T Consensus 267 ~L~~~-g~~~~~~~--~~~~~~~~~~~~-~----------------~~~~~~~~~l~~~-gi~v~~~~~~~--------- 316 (352)
T 1iug_A 267 VGEEG-GLRPVPKR--FSPAVAAFYLPE-G----------------VPYARVKEAFAQR-GAVIAGGQGPL--------- 316 (352)
T ss_dssp HHHHT-TCEESCSS--BCTTCEEEECCT-T----------------CCHHHHHHHHHTT-TEECEECCGGG---------
T ss_pred HHHHC-CCcccccc--cCCeEEEEEcCC-C----------------CCHHHHHHHHHHC-CEEEEeCCCcc---------
Confidence 99887 88887652 134466665542 1 4577899999765 99999775211
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++.+++++|+++++++|++++++.
T Consensus 317 --------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 317 --------------------KGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp --------------------TTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 14899999999999999999999999988654
No 23
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=9.2e-33 Score=289.81 Aligned_cols=352 Identities=13% Similarity=0.066 Sum_probs=254.7
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
|+.+.+..+.|+.+.+++.+.+..- ..+.+..+....+..+++++++++++|.+..++|+++ +|+++++..++..
T Consensus 6 ~~~~p~p~~~~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~-~g~t~al~~~~~~ 80 (362)
T 3ffr_A 6 IYFTPGPSELYPTVRQHMITALDEK----IGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFL-ASATEIWERIIQN 80 (362)
T ss_dssp EEECSSSCCCCTTHHHHHHHHHHTT----TTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEE-SCHHHHHHHHHHH
T ss_pred eeccCCCcCCCHHHHHHHHHHhcCC----ccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CCchHHHHHHHHh
Confidence 4555555667788887777766531 1011123445668889999999999998644489998 6777789988887
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+. ++ + +++....|++. ....+..|++++.++.+.++.+|+++|+ ++ ++++++
T Consensus 81 l~---------------~~-~---~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-----~~~~~v 134 (362)
T 3ffr_A 81 CV---------------EK-K---SFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-----ADAEII 134 (362)
T ss_dssp HC---------------SS-E---EEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-----TTCCEE
T ss_pred cc---------------CC-c---EEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-----CCccEE
Confidence 63 44 3 44444445552 2244567999999999888889999998 44 689999
Q ss_pred EEecccCccccccCHHHHHHHHHHh-CCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY 316 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~-g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~ 316 (609)
++++++||||.+.|+++|+++|++| |+++|+|++++.+..++++.. +|++++|+||+++||.|+|++++++++
T Consensus 135 ~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-----~d~~~~s~~K~~~~~~G~g~~~~~~~~- 208 (362)
T 3ffr_A 135 CLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-----IDSVFFSVQKCFGLPAGLGVWILNDRV- 208 (362)
T ss_dssp EEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-----CSEEEEETTSTTCCCSCCEEEEEEHHH-
T ss_pred EEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-----CcEEEEecccccCCCCceEEEEECHHH-
Confidence 9999999999999999999999999 999999999998877776642 799999999999988889999999988
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
++.+.+...||+...+. .+...+..........++++......+..++......|.+.+.++.+++++++.+.|+
T Consensus 209 -~~~~~~~~~gg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 283 (362)
T 3ffr_A 209 -IEKSKALLAKRKSIGTY----HTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIE 283 (362)
T ss_dssp -HHHHHHHHHTTCCCCST----TSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHhhhccccCCCCccc----ccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 34444444454432211 1111122222233346777766654332222222344788999999999999999999
Q ss_pred CCCceEEeCCCCCC-CcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 397 PNQNIKILGNTSTK-RQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 397 ~~p~i~v~~~~~~~-r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
++|+++++.+.... ...+++|.+.. +..++.+.|.++ ||.+++|..|.
T Consensus 284 ~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~~-gi~~~~g~~~~----------- 332 (362)
T 3ffr_A 284 SSKVFSFGVEDAKLRSMTTIVANTTM-------------------LPGEINKILEPF-DMAVGAGYGSK----------- 332 (362)
T ss_dssp HCSSEEESSSCGGGBCSSEEEEEESS-------------------CHHHHHHHHGGG-TEEEEECSGGG-----------
T ss_pred HccCceeccCChhhcCCceEEEecCC-------------------CHHHHHHHHHHC-CeEEecCcccc-----------
Confidence 99999998743222 34455555432 467889999775 99999875442
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.++++|||++.+++++|+++++++|++++
T Consensus 333 ------------------~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 333 ------------------KETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp ------------------TTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred ------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 24899999999999999999999998764
No 24
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.8e-32 Score=289.96 Aligned_cols=346 Identities=13% Similarity=0.136 Sum_probs=253.5
Q ss_pred CCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhccc
Q 038499 85 ASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 85 a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~ 163 (609)
+..+.++.|.+++.+.+.. ..+....+...++++++++++|++++ ++|++| +|+++++. ++..+
T Consensus 9 gp~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~-~g~t~al~-~~~~~--- 73 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNVG----------FTSKEFVEALAYSLKGLRYVMGASKNYQPLIIP-GGGTSAME-SVTSL--- 73 (384)
T ss_dssp SCSCCCHHHHHHTTCCSCC----------TTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEE-SCHHHHHH-HGGGG---
T ss_pred CCCCCCHHHHHHhhccccc----------cccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEc-CCcHHHHH-HHHhh---
Confidence 3356677777777554421 12334577889999999999999872 379998 66777787 65544
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEec
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSA 241 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~ 241 (609)
+++|| .|++....|++.. ...+..|++++.++.+.++.+|+++|++++++ .+++++++++
T Consensus 74 ------------~~~gd--~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~v~~~~ 135 (384)
T 3zrp_A 74 ------------LKPND--KILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK----SEYKLVALTH 135 (384)
T ss_dssp ------------CCTTC--EEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH----SCEEEEEEES
T ss_pred ------------cCCCC--EEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh----CCCcEEEEeC
Confidence 47888 6888888998742 33456799999999998889999999999984 3799999999
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
++||||.+.|+++|.++|++||+++|+|++++.+..+.++... +.|++++|+||+++||.|+|++++++++ ++.+
T Consensus 136 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~--~~~~ 210 (384)
T 3zrp_A 136 VETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEW---NVDVYLTASQKALGSAAGLGLLLLSPKA--LSIL 210 (384)
T ss_dssp EETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTT---TCSEEEEETTSTTCCCSSEEEEEECHHH--HHHH
T ss_pred CCCCCceECcHHHHHHHHHhcCCEEEEECcccccCcccccccc---CCCEEEecCcccccCCCceEEEEECHHH--HHHh
Confidence 9999999999999999999999999999999998887777654 7899999999999888889999999988 3333
Q ss_pred -CCCccCCCceEeeccccccccccccccc-----ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 322 -PPSTCGGGTVNYVNGFNEKDTLYLEDIE-----ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 322 -~p~~~ggg~v~~~~~~~~~~~~~~~~~~-----~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
.+....+ +..+...+..... .....|+++......+..++...+..+.+.+.++.+++++++.+.|
T Consensus 211 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 282 (384)
T 3zrp_A 211 DSQNSIAG--------YYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGL 282 (384)
T ss_dssp HHCCCSCC--------STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCc--------ccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2211100 0000011110000 1122357776655433222222245678899999999999999999
Q ss_pred CCCCceEEeCCCCCCCcceE-EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 396 LPNQNIKILGNTSTKRQAIL-SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~~~-~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
+++ +++++.+....+.+.+ +|.+.. .+...+.+.|.++ ||.+++|..|.
T Consensus 283 ~~~-g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~-gi~v~~g~~~~---------- 332 (384)
T 3zrp_A 283 EAL-GLEIVARRPESYSNTVTGVILKV------------------ADPQKVLAGTVNE-GVEFAPGVHPA---------- 332 (384)
T ss_dssp HHT-TCCBSCSSGGGBCSSEEEEECSS------------------SCHHHHHHHHHTT-TCCCEECCCTT----------
T ss_pred HHC-CCeEccCcccccCccEEEEECCC------------------CCHHHHHHHHHHC-CEEEecCCCCC----------
Confidence 988 8887765312233444 454433 3678899999775 99999775432
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+++||+++.++|++|+++++++|+++++...
T Consensus 333 --------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 333 --------------------FKYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp --------------------CCEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------cCEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 16899999999999999999999999988753
No 25
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=3.3e-32 Score=288.84 Aligned_cols=361 Identities=14% Similarity=0.095 Sum_probs=257.6
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEV 159 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (609)
|+.+.+..+.++.|.+++.+.+.. + ..........++++++++++|.+..++|++++ |+++++..++..
T Consensus 25 ~~~~p~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~-gg~~al~~~~~~ 93 (393)
T 3kgw_A 25 LLLGPGPSNLAPRVLAAGSLRMIG-----H-----MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSG-SGHCAMETALFN 93 (393)
T ss_dssp EECSSSCCCCCHHHHHHTTCCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESC-CTTTHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHhcccccC-----c-----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeC-CcHHHHHHHHHh
Confidence 555555556777777777543311 1 12234567889999999999997654588985 445577777776
Q ss_pred hcccchhhHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 160 MGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+ +++|| .|++..+.|++. ...++..|++++.++.+.++.+|+++|++++++ .+++++
T Consensus 94 ~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~~v 152 (393)
T 3kgw_A 94 L---------------LEPGD--SFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQ----HKPVLL 152 (393)
T ss_dssp H---------------CCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----HCCSEE
T ss_pred c---------------CCCCC--EEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh----CCCcEE
Confidence 5 37888 588877777643 455667899999999988889999999999984 279999
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhc
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQ 317 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~ 317 (609)
++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... ++|++++|+||+++||.|+|++++++++.
T Consensus 153 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~g~~~~~~~~~- 228 (393)
T 3kgw_A 153 FLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQ---GIDIMYSSSQKVLNAPPGISLISFNDKAK- 228 (393)
T ss_dssp EEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTT---TCCEEEEESSSTTCCCSSCEEEEECHHHH-
T ss_pred EEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhc---CCCEEEecCcccccCCCceeEEEECHHHH-
Confidence 99999999999999999999999999999999999988777776554 78999999999998888899999999873
Q ss_pred cCCCCCCccCCCceEeecccccccccccc-cccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLE-DIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~-~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
+.+.+...++... +.+ .. ....++. ....+...++++......+..++...+..+.+.+.++.+++++++.+.|+
T Consensus 229 -~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 304 (393)
T 3kgw_A 229 -YKVYSRKTKPVSF-YTD-IT-YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQ 304 (393)
T ss_dssp -HHHHTCSSCCSCS-TTC-HH-HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHhccCCCCCce-eec-HH-HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 3332221111100 000 00 0000000 01234556777766654433333322456788999999999999999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
++ +++++.+....+.+.+.+...+ .. .+..++.+.|.+++||.+++|..|.
T Consensus 305 ~~-g~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~l~~~~gi~v~~g~~~~------------ 355 (393)
T 3kgw_A 305 EM-GLKFFVKDPEIRLPTITTVTVP-AG---------------YNWRDIVSYVLDHFSIEISGGLGPT------------ 355 (393)
T ss_dssp HT-TCCBSSSSGGGBCSSEEEEECC-TT---------------BCHHHHHHHHHHHHCEECBCCCGGG------------
T ss_pred Hc-CCeeccCChhhcCCeEEEEeCC-CC---------------CCHHHHHHHHHHhCCEEEeCCcccC------------
Confidence 88 7877654323445555433333 11 4678899988776799999876332
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.++++||++ ++.+|++|+++++++|+++++...
T Consensus 356 -----------------~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 356 -----------------EERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp -----------------TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred -----------------CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 248999998 666799999999999999987653
No 26
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=6.5e-32 Score=289.24 Aligned_cols=331 Identities=15% Similarity=0.102 Sum_probs=246.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEE-EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc--
Q 038499 117 QHTTNMVHEASNYIKKCLGGGQEDAMI-FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-- 193 (609)
Q Consensus 117 ~~~~~~~~e~r~~ia~~~g~~~~~~vi-ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-- 193 (609)
....+...++++++++++|.+++ .++ ++ +|+++++..++..+ +++|| .|+++.++|++
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~-~~~~~~-~s~t~al~~~~~~l---------------~~~gd--~Vl~~~~~~~~~~ 100 (416)
T 3isl_A 40 PAFTGIMNETMEMLRELFQTKNR-WAYPID-GTSRAGIEAVLASV---------------IEPED--DVLIPIYGRFGYL 100 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCS-EEEEEE-SCHHHHHHHHHHHH---------------CCTTC--EEEEEESSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-cEEEec-CcHHHHHHHHHHHh---------------cCCCC--EEEEecCCcccHH
Confidence 34577889999999999999876 555 77 45556788777765 47888 69999999998
Q ss_pred hHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 194 NLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 194 ~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
....++..|++++.++.+.++.+|+++|++++++ ++++++++++++||||.+.|+++|.++|++||+++|+|++++
T Consensus 101 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 176 (416)
T 3isl_A 101 LTEIAERYGANVHMLECEWGTVFDPEDIIREIKK----VKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVAT 176 (416)
T ss_dssp HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----HCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh----CCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCcc
Confidence 4445677899999999998899999999999984 378999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC---------------CccCCCceEeecccc
Q 038499 274 GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP---------------STCGGGTVNYVNGFN 338 (609)
Q Consensus 274 ~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p---------------~~~ggg~v~~~~~~~ 338 (609)
.+..++++... ++|++++|+||+++||.|+|++++++++. +.+.+ ...||..... +.
T Consensus 177 ~~~~~~~~~~~---~~d~~~~s~~K~l~g~~g~g~~~~~~~~~--~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~---~~ 248 (416)
T 3isl_A 177 IGGCEVKVDEW---KIDAAIGGTQKCLSVPSGMAPITYNERVA--DVIAARKKVERGIATQADRAALSGNRPITS---NY 248 (416)
T ss_dssp TTTSCCCTTTT---TCSEEECCSSSTTCCCSSEEEEEECHHHH--HHHHTC------------------CCCCSC---ST
T ss_pred ccCCCcchhhc---CCCEEEecCccccCCCCCeEEEEECHHHH--HHhhccccccccccccccchhccCCCCCCc---cc
Confidence 88888877664 78999999999988898999999999873 23322 1122211100 00
Q ss_pred ccccccccc-ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEE
Q 038499 339 EKDTLYLED-IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSF 417 (609)
Q Consensus 339 ~~~~~~~~~-~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f 417 (609)
.....+... ...++..++++......+..++...+..|.+.+.++.+++++++.+.|+++ +++++.+.......+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 327 (416)
T 3isl_A 249 FDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCV 327 (416)
T ss_dssp TCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEE
T ss_pred cchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEE
Confidence 000001000 134456778777665443333332245578899999999999999999885 888876632112345556
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
.+.. + .+..++.+.|.+++||.+++|.... .+++
T Consensus 328 ~~~~-~----------------~~~~~l~~~L~~~~gi~v~~g~~~~-----------------------------~~~~ 361 (416)
T 3isl_A 328 EIPG-G----------------IDGESVRDMLLAQFGIEIASSFGPL-----------------------------AGKI 361 (416)
T ss_dssp ECCT-T----------------CCHHHHHHHHHHHHCEECBCCCSTT-----------------------------TTTE
T ss_pred eCCC-C----------------CCHHHHHHHHHHhCCEEEecCCCCC-----------------------------CCCE
Confidence 5543 2 4678899999776799999775211 2589
Q ss_pred EEEecCCCCCHHH-HHHHHHHHHHHHHhc
Q 038499 498 TRISFPYYMSNEE-FEFTLEALEFIAIYG 525 (609)
Q Consensus 498 iRls~~~~~t~ee-id~ll~al~~v~~~~ 525 (609)
+||+++.+++++| +++++++|+++++..
T Consensus 362 iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 362 WRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred EEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 9999977777777 999999999998764
No 27
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=3.5e-32 Score=286.78 Aligned_cols=352 Identities=17% Similarity=0.148 Sum_probs=251.9
Q ss_pred CceEEecC-CCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHH-HHHHhCCCCCCcEEEeCChHHHHH
Q 038499 76 RRLTYADH-TASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNY-IKKCLGGGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 76 ~~~vyld~-~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~-ia~~~g~~~~~~vift~sGttaal 153 (609)
+.++|+|+ ...++.++.+.+++.+.+.....+.....+..+........+++++ +++++|.+ +|+++ +|+++++
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~-~g~t~a~ 82 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVT-NGAREAK 82 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS---EEEEE-SSHHHHH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC---EEEEe-CChHHHH
Confidence 36899999 5578889999999988775431111100112233445668899999 99999986 78898 7777789
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEe--cCCCCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIG--LDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~--~~~~g~ld~e~L~~al~~~~~~ 231 (609)
..++.++ +++|| .|+++.++|+++...++..|++++.++ .++++.+|+++|++++++....
T Consensus 83 ~~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (371)
T 2e7j_A 83 FAVMHSL---------------AKKDA--WVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR 145 (371)
T ss_dssp HHHHHHH---------------CCTTC--EEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHH---------------hCCCC--EEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc
Confidence 8888876 36888 799999999999999999999999999 8778889999999999743211
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEE
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLM 311 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~ 311 (609)
++++++++++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||++++|.++|++++
T Consensus 146 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~~~G~~~~ 222 (371)
T 2e7j_A 146 GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGM 222 (371)
T ss_dssp SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEE
T ss_pred CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhc---CCCEEEecCCcCCCCCCCcEEEEE
Confidence 37899999999999999999999999999999999999999987765554433 579999999999998888999999
Q ss_pred echhhccCC-CCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHH--HH
Q 038499 312 TKALYQLGS-FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQE--ET 386 (609)
Q Consensus 312 ~~~~~~l~~-~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~--~~ 386 (609)
++++ ++. +.+...++.. ...++.++++..+.. .+++.+. +. .+.++. ++
T Consensus 223 ~~~~--~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~a~~~~l~~~--~~----~~~~~~~~~~ 276 (371)
T 2e7j_A 223 KEEW--AEIVLRRSEKYKNK------------------EVELLGCTARGATIITLMASFPHV--RE----RIKRWDEEVE 276 (371)
T ss_dssp CTTT--TTTTTCBCSSCTTS------------------BGGGTTCCCCSHHHHHHHHHHHHH--HH----HGGGHHHHHH
T ss_pred echh--hhhhccccccCccc------------------ccccccCCcCHHHHHHHHHHHHHH--HH----HHHHHHHHHH
Confidence 9988 455 5443322111 111235666555443 2344432 21 556667 78
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+++++.+.|+++ +++++.+.. .+.+++++.+. +...+.+.|.+ .||.+++ ..
T Consensus 277 ~~~~l~~~L~~~-~~~~~~~~~-~~~~~~~~~~~--------------------~~~~~~~~l~~-~gi~~~~-~~---- 328 (371)
T 2e7j_A 277 KARRFAAEMEKL-GIKQLGDNP-HNHDLMFFHAE--------------------VLYEISKKAKG-GRFFLYR-EL---- 328 (371)
T ss_dssp HHHHHHHHHHHT-TCEEESSSS-CCSSEEEEECH--------------------HHHHHHHHSSS-GGGHHHH-HH----
T ss_pred HHHHHHHHHHHc-CcEEecCCC-ccCceEEEECC--------------------CHHHHHHHHHH-CCEEEEe-cc----
Confidence 889999999887 888886531 13455554432 24678888864 6998874 11
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEE-EecCCC-CCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTR-ISFPYY-MSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iR-ls~~~~-~t~eeid~ll~al~~v~~~ 524 (609)
.... ..+..++++| ++++.+ ++++|+++++++|++++++
T Consensus 329 ---~~~~----------------~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 329 ---KSRK----------------IHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp ---HHTT----------------EECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---cccc----------------ccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 1000 0011258999 999988 9999999999999998764
No 28
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=4e-31 Score=279.44 Aligned_cols=345 Identities=12% Similarity=0.054 Sum_probs=245.2
Q ss_pred CCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 84 TASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 84 ~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+..+.++.|.+++.+.+.. | .+......++++++++++++|.+++.+++|..+|+++++..++..+
T Consensus 25 pgp~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~--- 91 (376)
T 3f0h_A 25 VGPVMSSEEVRAIGAEQVPY-----F-----RTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNC--- 91 (376)
T ss_dssp SSSCCCCHHHHHHHTSCCCC-----C-----SSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHH---
T ss_pred CCCCCCcHHHHHHhcCCCCC-----C-----CCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhc---
Confidence 33456677888887664421 1 1233457788999999999999764456663367677888887776
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchH--HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEec
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNL--LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSA 241 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~ 241 (609)
+++||+ |++....+++.. ......|++++.++.+.++.+|+++|+++++ ++++++++++
T Consensus 92 ------------~~~gd~--vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----~~~~~v~~~~ 152 (376)
T 3f0h_A 92 ------------FTKKDK--VLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-----QNFTGLLVNV 152 (376)
T ss_dssp ------------CCTTCC--EEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-----SCCCEEEEES
T ss_pred ------------cCCCCe--EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-----cCceEEEEec
Confidence 378884 666665555433 2355679999999998888999999999876 6899999999
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
++||||.+.|+++|.++|++||+++|+|++++.+..++++... ++|++++|+||+++||.|+|++++++++. +.+
T Consensus 153 ~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~--~~~ 227 (376)
T 3f0h_A 153 DETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC---GADVMITGSQKVLACPPGISVIVLAPRGV--ERV 227 (376)
T ss_dssp EETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEETTTTTCCCSSCEEEEECHHHH--HHH
T ss_pred ccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc---CccEEEecCcccccCCCceEEEEECHHHH--HHh
Confidence 9999999999999999999999999999999988777665543 68999999999999888899999999873 233
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhCCC
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYI-GHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~-g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
.+....+.. .....+...........++++... +.+++.+. +.. +.+.+.++.+++++++.+.|+++
T Consensus 228 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 228 EKSKVRTMY--------FDLKDALKNQERGQTPFTPAVGILLQINERLKEI--KKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp HTCCCCCST--------TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred hcCCCCcee--------ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 221111100 000011111111122334554332 23444443 334 57889999999999999999987
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhH
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~ 478 (609)
++++..+. ....++.+.. . + .+...+.+.|.+++||.+++|.. +.
T Consensus 298 -~~~~~~~~--~~~~~~~~~~-~-~----------------~~~~~l~~~l~~~~gi~v~~g~~---~~----------- 342 (376)
T 3f0h_A 298 -PFELVSES--PANGVTSVHP-T-T----------------ANAYDIFLKLKDEYGIWICPNGG---EM----------- 342 (376)
T ss_dssp -SEEECCSS--BBTTEEEEEE-S-S----------------SCHHHHHHHHHHHSSEECEECCG---GG-----------
T ss_pred -CCccCccc--cCceEEEEeC-C-C----------------CCHHHHHHHHHHhCCEEEecCcc---cc-----------
Confidence 67776542 2233344432 2 1 46788999998767999997621 10
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++.++|++|+++++++|+++++.+
T Consensus 343 ---------------~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~~ 374 (376)
T 3f0h_A 343 ---------------KDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp ---------------TTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred ---------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 25899999999999999999999999988754
No 29
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=2.2e-31 Score=278.16 Aligned_cols=343 Identities=13% Similarity=0.085 Sum_probs=248.1
Q ss_pred cCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHHHHHHh
Q 038499 82 DHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QEDAMIFCGSGTTAAIKRLQEVM 160 (609)
Q Consensus 82 d~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~~vift~sGttaal~~l~~~l 160 (609)
.+.+..+.++.|.+++.+.+. + + .+....+...++++++++++|.+ +.++|++| +|+++++..++..+
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~----~-~-----~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t-~g~t~a~~~~~~~~ 72 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMR----G-H-----LDPEVLRVNRAIQERLAALFDPGEGALVAALA-GSGSLGMEAGLANL 72 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCC----C-T-----TCHHHHHHHHHHHHHHHHHHCCCTTCEEEEES-SCHHHHHHHHHHTC
T ss_pred CCCCCCCCCHHHHHHHhcccc----c-c-----cCHHHHHHHHHHHHHHHHHhCCCCCCceEEEc-CCcHHHHHHHHHHh
Confidence 334445677777777765443 1 2 23345677899999999999986 22378998 67777888887654
Q ss_pred cccchhhHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEE
Q 038499 161 GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGS 238 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~ 238 (609)
++ | .|+++..+|+++ ...++..|++++.++.++++.+|+++|++++++ .++++++
T Consensus 73 ---------------~~--d--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~~v~ 129 (353)
T 2yrr_A 73 ---------------DR--G--PVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKR----RRYRMVA 129 (353)
T ss_dssp ---------------SC--C--CEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHH----SCCSEEE
T ss_pred ---------------cC--C--cEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHh----CCCCEEE
Confidence 23 5 488888899986 233466799999999988888999999999983 2789999
Q ss_pred EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhcc
Q 038499 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 239 ~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l 318 (609)
+++++||||.+.|+++|.++|++||+++|+|++++.+..++++... +.|++++|+||+++||.|+|++++++++ +
T Consensus 130 ~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~--~ 204 (353)
T 2yrr_A 130 LVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEA--R 204 (353)
T ss_dssp EESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHHH--H
T ss_pred EEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHHH--H
Confidence 9999999999999999999999999999999999877666554433 5799999999998888889999999988 3
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
+.+.. ..+.. .+...+..........++++...... +++..+ +..|.+.+.++.+++++++.+.|+
T Consensus 205 ~~l~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~ 272 (353)
T 2yrr_A 205 KAFTG-KRGWY---------LDLARVAEHWERGGYHHTTPVLLHYALLEALDLV--LEEGVAARERRAREVYAWVLEELK 272 (353)
T ss_dssp HHCCC-CSCST---------TCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-CCCcc---------ccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 33321 00000 00000000001223356666655433 344443 345788889999999999999998
Q ss_pred CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCCh
Q 038499 397 PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDE 476 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~ 476 (609)
++ +++++.+. .....++++.+.. + .+...+.+.|.++ ||.+++|..|.
T Consensus 273 ~~-g~~~~~~~-~~~~~~~~~~~~~-~----------------~~~~~~~~~l~~~-gi~v~~g~~~~------------ 320 (353)
T 2yrr_A 273 AR-GFRPYPKA-SPLPTVLVVRPPE-G----------------VDADRLVRALYAE-GVAVAGGIGPT------------ 320 (353)
T ss_dssp HT-TCEESCSS-SBCTTEEEEECCT-T----------------CCHHHHHHHHHHT-TEECEECCGGG------------
T ss_pred HC-CCccccCc-cCCCeEEEEECCC-C----------------CCHHHHHHHHHHC-CEEEeCCcccc------------
Confidence 87 88887642 1123344555532 1 4578899999775 99999876542
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH-HHHHHHHHHHHh
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE-FTLEALEFIAIY 524 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid-~ll~al~~v~~~ 524 (609)
.++++|++++.+++++|++ +++++|+++++.
T Consensus 321 -----------------~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 321 -----------------RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp -----------------TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred -----------------CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 1478999998888999999 999999988753
No 30
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3e-30 Score=273.66 Aligned_cols=371 Identities=16% Similarity=0.038 Sum_probs=260.5
Q ss_pred CCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHH
Q 038499 46 KSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE 125 (609)
Q Consensus 46 r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e 125 (609)
+...+.++.++.+++...... ... ...|+.+... +.++.+.+++.+.+...+.++.. .....+...+
T Consensus 7 ~~~~~~~~~~~~l~~~~~~~~-~~~------~~~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~~~~~ 73 (397)
T 3f9t_A 7 EKGVSEKEILEELKKYRSLDL-KYE------DGNIFGSMCS-NVLPITRKIVDIFLETNLGDPGL-----FKGTKLLEEK 73 (397)
T ss_dssp SSCCCHHHHHHHHHHHHTTSC-CGG------GTCBCSCSCC-CCCTHHHHHHHHHTTCCTTSGGG-----BHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhccCC-CCC------CCCeEEEecC-CCcHHHHHHHHHHHhhcCCCccc-----ChhHHHHHHH
Confidence 333346777788887654321 111 2247777754 45567888888887655444431 1246788889
Q ss_pred HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhh--hcCCCceEEEECCCCccchHHHHHHcCc
Q 038499 126 ASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKC--LRDEERWVVFVGPHEHHSNLLSWRQSLA 203 (609)
Q Consensus 126 ~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~--l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (609)
+++++++++|++++ +|++| +|+++++..++.++... +++.-... -.+|| .|+++..+|+++...++..|+
T Consensus 74 l~~~la~~~~~~~~-~i~~~-~ggt~a~~~~~~~~~~~----~~~~~~~~~~~~~gd--~vl~~~~~~~~~~~~~~~~g~ 145 (397)
T 3f9t_A 74 AVALLGSLLNNKDA-YGHIV-SGGTEANLMALRCIKNI----WREKRRKGLSKNEHP--KIIVPITAHFSFEKGREMMDL 145 (397)
T ss_dssp HHHHHHHHTTCTTC-EEEEE-SCHHHHHHHHHHHHHHH----HHHHHHTTCCCCSSC--EEEEETTCCTHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCCC-CEEEe-cCcHHHHHHHHHHHHHH----HHhhhhhcccCCCCe--EEEECCcchhHHHHHHHHcCc
Confidence 99999999999876 89998 56666777777665210 00000000 02366 799999999999999999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccC--
Q 038499 204 EVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDV-- 281 (609)
Q Consensus 204 ~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~-- 281 (609)
+++.++.++++.+|+++|++++++ .+++++++++++||||.+.|+++|.++|++||+++|+|++++.+..+..-
T Consensus 146 ~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~ 221 (397)
T 3f9t_A 146 EYIYAPIKEDYTIDEKFVKDAVED----YDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDK 221 (397)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHH----SCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGG
T ss_pred eeEEEeeCCCCcCCHHHHHHHHhh----cCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccc
Confidence 999999998999999999999983 27899999999999999999999999999999999999998754332110
Q ss_pred ---------CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC---CCCccCCCceEeeccccccccccccccc
Q 038499 282 ---------RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF---PPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 282 ---------~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~---~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
..... ++|++++|+||++++|.++|+++++++.. .+.+ .+...++..
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~------------------- 280 (397)
T 3f9t_A 222 YKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGY-KRYLDVDAPYLTETRQ------------------- 280 (397)
T ss_dssp GCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGG-GGGTCEECTTSSSSEE-------------------
T ss_pred cccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHH-HHhhccCCccccCCCc-------------------
Confidence 01112 67999999999998888899999987652 2222 222222111
Q ss_pred ccccCCCh---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCC
Q 038499 350 ERESGGTP---QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 350 ~r~~~gtp---~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
....+++ ++.+ ..+++.++ ...+.+.+.++.+++++++.+.|+++ +++++.+ +..++++|....
T Consensus 281 -~~~~~~~~~~~~~~-~~a~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~---~~~~~~~~~~~~----- 347 (397)
T 3f9t_A 281 -ATILGTRVGFGGAC-TYAVLRYL--GREGQRKIVNECMENTLYLYKKLKEN-NFKPVIE---PILNIVAIEDED----- 347 (397)
T ss_dssp -CSSCSSCCSHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC---CSSSEEEEECTT-----
T ss_pred -cccccccccchHHH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcC---CCccEEEEEeCC-----
Confidence 0112332 2222 23334433 34567788888889999999999888 7776655 345666554432
Q ss_pred cCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 427 SLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
...+.+.|.++ ||.+++|. .++++||+++.++
T Consensus 348 ---------------~~~~~~~l~~~-gi~v~~~~--------------------------------~~~~~Ri~~~~~~ 379 (397)
T 3f9t_A 348 ---------------YKEVCKKLRDR-GIYVSVCN--------------------------------CVKALRIVVMPHI 379 (397)
T ss_dssp ---------------HHHHHHHHHHT-TCBCEECS--------------------------------SSSEEEEECCTTC
T ss_pred ---------------HHHHHHHHHhC-CeEEeccC--------------------------------CCCEEEEEEcCCC
Confidence 56888888765 99988542 1489999999999
Q ss_pred CHHHHHHHHHHHHHHHH
Q 038499 507 SNEEFEFTLEALEFIAI 523 (609)
Q Consensus 507 t~eeid~ll~al~~v~~ 523 (609)
|++|+++++++|+++++
T Consensus 380 ~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 380 KREHIDNFIEILNSIKR 396 (397)
T ss_dssp CHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 99999999999998753
No 31
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=8.3e-31 Score=289.72 Aligned_cols=399 Identities=15% Similarity=0.119 Sum_probs=258.5
Q ss_pred cchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHH
Q 038499 48 ISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEAS 127 (609)
Q Consensus 48 ~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r 127 (609)
..+.++.++.+++.+... ...+ ...|+++..+++.|..+...+... +.|++...+..+...+++..+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~-----~~~~--~p~~~~~~~~~~~~~~~~~~~l~~----~~n~~~~~~~~s~~~~~le~~~~ 154 (515)
T 2jis_A 86 GESQKQILERCRAVIRYS-----VKTG--HPRFFNQLFSGLDPHALAGRIITE----SLNTSQYTYEIAPVFVLMEEEVL 154 (515)
T ss_dssp CCCHHHHHHHHHHHHHHS-----CCTT--STTEESSSCCCCCHHHHHHHHHHH----HHCCCTTCTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCC-----CCCC--CCCeEEEeeCCCCHHHHHHHHHHH----HhccCCCchhhchHHHHHHHHHH
Confidence 333667777777654321 1122 235999999998888776543332 34665543445667788999999
Q ss_pred HHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc-CCC----ceEEEECCCCccchHHHHHHcC
Q 038499 128 NYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR-DEE----RWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 128 ~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd----~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
+++++++|.+++ .++|+++||.+ +..++.++. ++....++ +|+ +.+|+++..+|+++..+++..|
T Consensus 155 ~~la~l~g~~~~-~~~~t~ggtea-~~~al~~ar--------~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g 224 (515)
T 2jis_A 155 RKLRALVGWSSG-DGIFCPGGSIS-NMYAVNLAR--------YQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLG 224 (515)
T ss_dssp HHHHHHHTCSSC-EEEEESSHHHH-HHHHHHHHH--------HHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHhCCCCC-CeEEcCCcHHH-HHHHHHHHH--------HHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcC
Confidence 999999999865 89999555554 444433321 10000011 343 4479999999999999999888
Q ss_pred c---eEEEEecCCCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 203 A---EVVEIGLDDDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 203 ~---~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
. +++.|+.++++.+|+++|+++|++....+ +|++|++++++|+||.+.|+++|+++|++||+++|+|+|++.+...
T Consensus 225 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~ 304 (515)
T 2jis_A 225 LGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLL 304 (515)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHh
Confidence 8 99999998889999999999997532212 5899999999999999999999999999999999999999887765
Q ss_pred cc-----CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech--hhc--cCCCCCCccCCCceEeeccccccccccccccc
Q 038499 279 ID-----VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA--LYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 279 id-----~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~--~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
.+ +.. ..++|++++|+|||+++|.|+|+++++++ +.. .....+...+++.. +...+.. .+..+ ...
T Consensus 305 ~~~~~~~~~g--~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~-~~~~~~~-~~~~~-~~~ 379 (515)
T 2jis_A 305 SQTHRHLLDG--IQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKF-YDVALDT-GDKVV-QCG 379 (515)
T ss_dssp CTTTGGGGTT--GGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CC-SCGGGCC-GGGCS-CSS
T ss_pred ChhhHhhcCC--CccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCccc-ccccCCC-CCCCC-CCC
Confidence 54 221 13679999999999999999999999987 421 11123333332210 0000000 00000 000
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
+| .+ .+. +.+++..+ ...|++.+.++..++++++.+.|+++|+++++.+ +..++++|...+ ...
T Consensus 380 rr--~~---al~-~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~---~~~~~v~f~~~p-~~~---- 443 (515)
T 2jis_A 380 RR--VD---CLK-LWLMWKAQ--GDQGLERRIDQAFVLARYLVEEMKKREGFELVME---PEFVNVCFWFVP-PSL---- 443 (515)
T ss_dssp CC--CC---HHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC---CSSSEEEEEECC-GGG----
T ss_pred Cc--cc---HHH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC---CCeeEEEEEEeC-ccc----
Confidence 11 11 111 12223322 3456888899999999999999999999999876 356788887754 210
Q ss_pred CCCCCCCCCCCChH-----------HHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 430 ENTKTETDKPLHGP-----------FVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 430 ~~~~~~~~~~l~~~-----------~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
.+. .+.. .+.+.|.+. |+.. .++. . +.+ .++++
T Consensus 444 ------~~~-~~~~~~~~~l~~~~~~l~~~l~~~-G~~~------~~~~-~-~~~--------------------~~~~l 487 (515)
T 2jis_A 444 ------RGK-QESPDYHERLSKVAPVLKERMVKE-GSMM------IGYQ-P-HGT--------------------RGNFF 487 (515)
T ss_dssp ------TTC-TTSTTHHHHHHTHHHHHHHHHHHH-TSCE------EEEE-E-ETT--------------------EEEEE
T ss_pred ------ccc-ccchhHHHHHHHHHHHHHHHHHhc-CCEE------EEEE-E-ECC--------------------ceEEE
Confidence 000 0111 134444332 4432 1110 0 000 14789
Q ss_pred EEec-CCCCCHHHHHHHHHHHHHHHHh
Q 038499 499 RISF-PYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 499 Rls~-~~~~t~eeid~ll~al~~v~~~ 524 (609)
|+++ ++++|++|+++++++|++++++
T Consensus 488 Ris~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 488 RVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999 8999999999999999988753
No 32
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3e-30 Score=284.03 Aligned_cols=397 Identities=12% Similarity=0.074 Sum_probs=263.0
Q ss_pred CCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHH
Q 038499 46 KSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHE 125 (609)
Q Consensus 46 r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e 125 (609)
....+.++.++.+++.+.... .+++ ...|+|+.++++.++.+.+++..... |++...+..+...+.+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~yl~~~~~~~~~~~v~~~~~~~~~----n~~~~~~~~~~~~~~le~~ 144 (497)
T 2qma_A 75 NKNAPLKSVIDDVAELVAKNA----IFTQ--HPDCIAHLHTPPLMPAVAAEAMIAAL----NQSMDSWDQASSATYVEQK 144 (497)
T ss_dssp SCCCCHHHHHHHHHHHTTTTS----CCTT--STTBCSSSCCCCBHHHHHHHHHHHHH----CCCTTCGGGCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCC----CCCC--CCCeeEeCCCCCcHHHHHHHHHHHhh----cccccchhhChHHHHHHHH
Confidence 344447888888888764221 1233 23599999999999999888876554 3332223344567788888
Q ss_pred HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhh------hcCC-----CceEEEECCCCccch
Q 038499 126 ASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKC------LRDE-----ERWVVFVGPHEHHSN 194 (609)
Q Consensus 126 ~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~------l~~g-----d~~~Vlv~~~~h~s~ 194 (609)
+++++++++|.++.+.++||++||. ++..++.+. |+..... ..+| ++.+|+++..+|+++
T Consensus 145 ~~~~la~~~g~~~~~~~~~t~ggt~-a~~~al~~a--------r~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~ 215 (497)
T 2qma_A 145 VVNWLCDKYDLSEKADGIFTSGGTQ-SNQMGLMLA--------RDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTV 215 (497)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSHHH-HHHHHHHHH--------HHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHH
T ss_pred HHHHHHHHhCCCCCCCeEEcCCchH-HHHHHHHHH--------HHHHHHhhcccchhhcccccccCCeEEEECCCchHHH
Confidence 9999999999976448999955555 555544432 1110000 0121 233799999999999
Q ss_pred HHHHHHcCc---eEEEEecCCCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWRQSLA---EVVEIGLDDDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~~~G~---~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
..+++..|. +++.||.++++.+|+++|+++|++....+ ++.++++++++|+||.+.|+++|+++|++||+++|+|+
T Consensus 216 ~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~ 295 (497)
T 2qma_A 216 QKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDG 295 (497)
T ss_dssp HHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEeh
Confidence 999988876 89999999899999999999997532111 24488899999999999999999999999999999999
Q ss_pred cccCCcccccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 271 AASGPYVEIDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 271 A~~~~~~~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
|++.+....++... ...++|++++|+|||+++|.++|+++++++.. ++.+. .... |..........+.
T Consensus 296 a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~-~~~~~---~~~~---yl~~~~~~~~~~~--- 365 (497)
T 2qma_A 296 AYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSN-FKFLL---HHAD---YLNREHDELPNLV--- 365 (497)
T ss_dssp TTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGG-GGGGC---C----------------------
T ss_pred hhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHH-HHHhc---CCch---hcCCccccCCCcc---
Confidence 99887765552211 11367999999999999999999999987652 22111 1110 0000000000000
Q ss_pred cccccCCCh--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCC
Q 038499 349 EERESGGTP--QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINS 426 (609)
Q Consensus 349 ~~r~~~gtp--~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~ 426 (609)
....+ ++. ..+. +.+++... ...|++.+.++..++++++.+.|+++|+++++.+ ++.++++|.+.+ ..
T Consensus 366 ~~~~~-~~r~~~al~-~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~f~~~~-~~-- 435 (497)
T 2qma_A 366 DKSIA-TTKRFDALK-VFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELLAE---PSLSTVLFRATH-ET-- 435 (497)
T ss_dssp ----C-CSCCCTHHH-HHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSC---CSSSEEEEEECC-SS--
T ss_pred ccCCC-CCCchhHHH-HHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcC---CCceEEEEEEcC-Cc--
Confidence 00000 110 1111 12233322 2345677888899999999999999999999865 357888888765 21
Q ss_pred cCCCCCCCCCCCCCC----hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 427 SLGENTKTETDKPLH----GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 427 ~~~~~~~~~~~~~l~----~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
.. ...+.+.|.+ .|+.+.++.... ..+++|+++
T Consensus 436 -------------~~~~~l~~~l~~~l~~-~G~~~~~~~~~~-----------------------------g~~~lRis~ 472 (497)
T 2qma_A 436 -------------ADLDELNKALRLEALT-RGIAVLGETIVD-----------------------------GKTALKFTI 472 (497)
T ss_dssp -------------SCHHHHHHHHHHHHHH-HTSCBCEEEEET-----------------------------TEEEEEEEC
T ss_pred -------------cCHHHHHHHHHHHHHh-CCCEEEEeeEEC-----------------------------CEEEEEEEe
Confidence 11 2345566655 377665321100 137899998
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHh
Q 038499 503 -PYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 503 -~~~~t~eeid~ll~al~~v~~~ 524 (609)
++++|++|+++++++|+++++.
T Consensus 473 ~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 473 LNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999998765
No 33
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.98 E-value=2.7e-29 Score=273.00 Aligned_cols=391 Identities=12% Similarity=-0.011 Sum_probs=262.7
Q ss_pred chHHHHHHHHHhhccCCC-ccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHH
Q 038499 49 SSSEKKLTWLQSQIIGKN-AEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEAS 127 (609)
Q Consensus 49 ~~~~~~~~~~r~~~~g~~-~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r 127 (609)
.+.++.++.+++.+...+ .....|. |+. ++.++.+.+++.+.+.....+ +..+....++.++++
T Consensus 23 ~~~~~v~~~~~~~~~~~~~~~~~~~~------f~~----~~~~~~v~e~~~~a~~~~~~~-----~~~~~~~~~l~~~~~ 87 (452)
T 2dgk_A 23 MRDDVAFQIINDELYLDGNARQNLAT------FCQ----TWDDENVHKLMDLSINKNWID-----KEEYPQSAAIDLRCV 87 (452)
T ss_dssp CCHHHHHHHHHHHGGGSCCCTTBCSC------CSC----CCCCHHHHHHHHHTTTCBTTC-----TTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCccCCCC------eeC----CCchHHHHHHHHHHhccCCCC-----hhhChhHHHHHHHHH
Confidence 336677788877762111 1122221 221 344567888887766432112 123446778899999
Q ss_pred HHHHHHhCCCCCC----cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC---CceEEEECCCCccchHHHHHH
Q 038499 128 NYIKKCLGGGQED----AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE---ERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 128 ~~ia~~~g~~~~~----~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g---d~~~Vlv~~~~h~s~~~~~~~ 200 (609)
+++++++|.+.+. .+++| +|+++++..++.++.- .++.+ ...+| ++++|+++. .|+++...++.
T Consensus 88 ~~la~l~g~~~~~~~~~~~~~t-~ggtea~~~al~a~~~----~~~~~---~~~~G~~~~~~~vi~~~-~h~~~~~~~~~ 158 (452)
T 2dgk_A 88 NMVADLWHAPAPKNGQAVGTNT-IGSSEACMLGGMAMKW----RWRKR---MEAAGKPTDKPNLVCGP-VQICWHKFARY 158 (452)
T ss_dssp HHHHHHTTCCCCTTSCCEEEEE-SSHHHHHHHHHHHHHH----HHHHH---HHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred HHHHHHhCCCcccccCCceEEe-CCHHHHHHHHHHHHHH----HHHHH---HHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence 9999999998752 48888 5555566655544310 00000 01244 334799999 99999999999
Q ss_pred cCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh------CCeEEEecccc
Q 038499 201 SLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY------GGFACFDFAAS 273 (609)
Q Consensus 201 ~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~------g~~vivD~A~~ 273 (609)
.|++++.|++++ ++.+|+++|+++|+ ++|++|++++++|+||.+.|+++|+++|++| |+++|+|+|++
T Consensus 159 ~G~~v~~v~~~~~~~~~d~~~l~~~i~-----~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~ 233 (452)
T 2dgk_A 159 WDVELREIPMRPGQLFMDPKRMIEACD-----ENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASG 233 (452)
T ss_dssp TTCEEEECCCBTTBCSCCHHHHHHHCC-----TTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTG
T ss_pred cCceEEEEecCCCCCeECHHHHHHHHh-----hCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccH
Confidence 999999999987 78999999999998 5799999999999999999999999999996 99999999988
Q ss_pred CCcc-------cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech-hhccCCC--CCCccCCCceEeeccccccccc
Q 038499 274 GPYV-------EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQLGSF--PPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 274 ~~~~-------~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
.+.. +.++. ..++|++++++|||+++|.++|+++++++ .. .+.+ .+.+.++...
T Consensus 234 ~~~~~~~~~~~~~~~~---~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~------------ 297 (452)
T 2dgk_A 234 GFLAPFVAPDIVWDFR---LPRVKSISASGHKFGLAPLGCGWVIWRDEEAL-PQELVFNVDYLGGQIG------------ 297 (452)
T ss_dssp GGTHHHHCTTCCCSTT---STTEEEEEEETTTTTCCCSSCEEEEESSGGGS-CGGGCEEECCTTCCEE------------
T ss_pred HHHHHhhCccchhhcC---CCCCcEEEECcccccCCCCCeEEEEEcCHHHH-HHHhccCccccCCCCC------------
Confidence 6543 12332 24789999999999988999999999765 31 0111 1222222110
Q ss_pred ccccccccccCCChhHHH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCC-CCCcceEEEEec
Q 038499 344 YLEDIEERESGGTPQVIQ--MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTS-TKRQAILSFNIH 420 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~-~~r~~~~~f~~~ 420 (609)
.....++..... ...+++..+ ...|++.+.++..++++++.+.|+++++++++.+.. ....++++|.+.
T Consensus 298 ------~~~~~~~r~~~~~~~~~aal~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~ 369 (452)
T 2dgk_A 298 ------TFAINFSRPAGQVIAQYYEFLRL--GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLK 369 (452)
T ss_dssp ------ECCSCCSCBCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEEC
T ss_pred ------CcccCCCChhHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEec
Confidence 000112222111 122333333 335678888999999999999999998899986421 146788888876
Q ss_pred cCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 421 SSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
+ .. ...++...+.+.|.+ .||.++.. ..|.. +. ..+++|+
T Consensus 370 ~-~~------------~~~~~~~~l~~~L~~-~Gi~v~~~---~~~~~--~~---------------------~~~~lRi 409 (452)
T 2dgk_A 370 D-GE------------DPGYTLYDLSERLRL-RGWQVPAF---TLGGE--AT---------------------DIVVMRI 409 (452)
T ss_dssp T-TC------------CCSCCHHHHHHHHHH-TTCBCCEE---ECSTT--CT---------------------TCEEEEE
T ss_pred C-cc------------cccCCHHHHHHHHHh-cCCeeeee---eCCcc--cC---------------------CeEEEEE
Confidence 4 21 011345789999976 59987742 21210 00 1469999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHhcccccCCC
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAIYGQRFLPLY 532 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~~~~~~~p~y 532 (609)
+++.++|++|+++++++|+++++...+.-+.+
T Consensus 410 s~~~~~t~e~id~li~~l~~~~~~~~~~~~~~ 441 (452)
T 2dgk_A 410 MCRRGFEMDFAELLLEDYKASLKYLSDHPKLQ 441 (452)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHCGGGT
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999987765543444
No 34
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.98 E-value=4.3e-30 Score=269.67 Aligned_cols=319 Identities=11% Similarity=0.046 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHH
Q 038499 121 NMVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSW 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~ 198 (609)
....++++++++++|.+.+ ++++++ +|+++++..++.++ +++||+ +|++++.+|++. ....
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~-~g~t~a~~~~~~~~---------------~~~gd~-vi~~~~~~~~~~~~~~~ 99 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQ-GSGSYAVEAVLGSA---------------LGPQDK-VLIVSNGAYGARMVEMA 99 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEE-SCHHHHHHHHHHHS---------------CCTTCC-EEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEe-cChHHHHHHHHHHh---------------cCCCCe-EEEEeCCCccHHHHHHH
Confidence 5678899999999993211 268998 67777888888776 367774 455666777763 3456
Q ss_pred HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc
Q 038499 199 RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 199 ~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~ 278 (609)
+..|++++.++.+.++.+|+++|++++++. .+++++++++++||||.+.|+++|.++|++||+++|+|++++.+..+
T Consensus 100 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~ 176 (366)
T 1m32_A 100 GLMGIAHHAYDCGEVARPDVQAIDAILNAD---PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP 176 (366)
T ss_dssp HHHTCCEEEEECCTTSCCCHHHHHHHHHHC---TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC
T ss_pred HHhCCceEEEeCCCCCCCCHHHHHHHHhcC---CCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcC
Confidence 678999999999888889999999999852 25889999999999999999999999999999999999999988777
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc--cccccCCC
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI--EERESGGT 356 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~--~~r~~~gt 356 (609)
+++... +.|++++|+||+++||.|+|++++++++ ++.+.+...+. ..+....+... ......++
T Consensus 177 ~~~~~~---~~di~~~s~~K~~~~~~g~G~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 242 (366)
T 1m32_A 177 MDIAAL---HIDYLISSANKCIQGVPGFAFVIAREQK--LAACKGHSRSL---------SLDLYAQWRCMEDNHGKWRFT 242 (366)
T ss_dssp CCTTTT---TCSEEEEESSSTTCCCSSEEEEEEEHHH--HTTCTTCCSCS---------TTCHHHHHHHHHHTTTCCSSC
T ss_pred cccccc---CccEEEecCcccccCCCceEEEEECHHH--HHhhcCCCCCc---------cccHHHHHhhhcccCCCCCCC
Confidence 766543 6899999999999888889999999988 44543321000 00000000000 00111245
Q ss_pred hhHHHHH--HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCC
Q 038499 357 PQVIQMI--RAALAFWVKEYIG-HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 357 p~i~~~~--~aal~~~~~~~~g-~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~ 432 (609)
++..... .+++..+ +..| ++.+.++.+++++++.+.|+++ +++++.+. ..+.+ ++++.+.. .
T Consensus 243 ~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~~~~~-~--------- 308 (366)
T 1m32_A 243 SPTHTVLAFAQALKEL--AKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDD-ELHSPIITAFYSPE-D--------- 308 (366)
T ss_dssp CCHHHHHHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCG-GGBCSSEEEEECCC-C---------
T ss_pred CCHHHHHHHHHHHHHH--HHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCc-hhcCceEEEEEcCc-c---------
Confidence 5554433 3444443 3345 7888899999999999999887 77776542 12455 44444431 0
Q ss_pred CCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 433 KTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
...+...+.+.|.++ ||.+++|..|. ++++|++++.+++++|++
T Consensus 309 -----~~~~~~~~~~~l~~~-gi~v~~~~~~~------------------------------~~~iRi~~~~~~~~~~i~ 352 (366)
T 1m32_A 309 -----PQYRFSEFYRRLKEQ-GFVIYPGKVSQ------------------------------SDCFRIGNIGEVYAADIT 352 (366)
T ss_dssp -----TTCCHHHHHHHHHHT-TEECEECCCSS------------------------------SCEEEEECCSSCCHHHHH
T ss_pred -----CCCCHHHHHHHHHHC-CEEEECCcCCC------------------------------CCEEEEecCCCCCHHHHH
Confidence 014577899988765 99999876552 479999999999999999
Q ss_pred HHHHHHHHHHH
Q 038499 513 FTLEALEFIAI 523 (609)
Q Consensus 513 ~ll~al~~v~~ 523 (609)
+++++|+++++
T Consensus 353 ~~~~~l~~~~~ 363 (366)
T 1m32_A 353 ALLTAIRTAMY 363 (366)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 35
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.98 E-value=2.1e-29 Score=277.83 Aligned_cols=415 Identities=13% Similarity=0.089 Sum_probs=263.8
Q ss_pred CCCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHH
Q 038499 45 PKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVH 124 (609)
Q Consensus 45 ~r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~ 124 (609)
+....+.++.++.+++.+... .+.+. ..|+++..++..+..+...+.... .|++...+..+...+.+..
T Consensus 67 p~~~~~~~~~~~~~~~~~~~~-----~~~~~--p~~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~~~~~~~le~ 135 (504)
T 2okj_A 67 SDHPESLEQILVDCRDTLKYG-----VRTGH--PRFFNQLSTGLDIIGLAGEWLTST----ANTNMFTYEIAPVFVLMEQ 135 (504)
T ss_dssp CSSCCCHHHHHHHHHHHHHTS-----CCTTC--TTEESSSSCCCCHHHHHHHHHHHH----HCCBSSCTTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhcc-----CCCCC--CCEEEEccCCCCHHHHHHHHHHHh----hccCCCchhhChHHHHHHH
Confidence 333444677888887755422 12222 249999988888876644332222 2443322344556678888
Q ss_pred HHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhc-ccchhhHHHHHHhhhcCC----CceEEEECCCCccchHHH
Q 038499 125 EASNYIKKCLGGG--QEDAMIFCGSGTTAAIKRLQEVMG-IAVPSILREKLIKCLRDE----ERWVVFVGPHEHHSNLLS 197 (609)
Q Consensus 125 e~r~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~-~~~~~~~~~~~~~~l~~g----d~~~Vlv~~~~h~s~~~~ 197 (609)
++++++++++|.+ ++ .++||++|| +++..++.++. ...+.. .++| ++.+|+++..+|+++..+
T Consensus 136 ~~~~~la~~~g~~~~~~-~~~~t~ggt-ea~~~al~~~~~~~~~~~--------~~~G~~~~~~~~v~~s~~~h~s~~~~ 205 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDG-DGIFSPGGA-ISNMYSIMAARYKYFPEV--------KTKGMAAVPKLVLFTSEQSHYSIKKA 205 (504)
T ss_dssp HHHHHHHHHHTCCSSSC-EEEEESSHH-HHHHHHHHHHHHHHCTTH--------HHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred HHHHHHHHHhCCCCCCC-CEEEeCCcH-HHHHHHHHHHHHHHhhHH--------hhcCccccCCeEEEECCcchHHHHHH
Confidence 8999999999998 44 899995555 45555544431 000000 0123 234799999999999999
Q ss_pred HHHcCc---eEEEEecCCCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 198 WRQSLA---EVVEIGLDDDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 198 ~~~~G~---~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
++..|. +++.|+.++++.+|+++|+++|++....+ +|++|++++++|+||.+.|+++|+++|++||+++|+|+|++
T Consensus 206 ~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 206 GAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred HHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 988776 89999998899999999999997532212 58899999999999999999999999999999999999988
Q ss_pred CCccc-----ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEech-hhc--cCCCCCCccCCCceEeeccccccccccc
Q 038499 274 GPYVE-----IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 274 ~~~~~-----id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
.+... ..+.. ..++|++++++|||+++|.++|+++++++ +.. +....+...+++.... ...+...+.
T Consensus 286 ~~~~~~~~~~~~~~g--~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~ 360 (504)
T 2okj_A 286 GGLLMSRKHRHKLNG--IERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYD---VSYDTGDKA 360 (504)
T ss_dssp GGGGGCTTTGGGGTT--GGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSC---GGGCCGGGS
T ss_pred hHHHhCHhhHhhcCC--cccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCccccc---CcCCcccCC
Confidence 76543 22221 13679999999999999999999999874 421 1123344333322000 000000000
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTIN 425 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~ 425 (609)
-...+| .++..+ .+++..+ ...|++.+.++..++++++.+.|+++|+++++.+. .+..++++|...+ ...
T Consensus 361 ~~~~rr--~~~l~~----~a~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~p~~~~v~f~~~~-~~~ 430 (504)
T 2okj_A 361 IQCGRH--VDIFKF----WLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG-EPEHTNVCFWYIP-QSL 430 (504)
T ss_dssp SCSSCB--CCHHHH----HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS-CCSSSCEEEEECC-GGG
T ss_pred CCCCCC--ccHHHH----HHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC-CCCeEEEEEEEeC-ccc
Confidence 000111 222222 2223322 23467888899999999999999999999998731 2467888888755 210
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC-C
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP-Y 504 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~-~ 504 (609)
...+....-..........+.+.|.+. |+.+.++..+. + .++++|++++ +
T Consensus 431 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~--------~--------------------~~~~lRis~~~~ 481 (504)
T 2okj_A 431 RGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQG--------D--------------------KANFFRMVISNP 481 (504)
T ss_dssp SSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEEET--------T--------------------EEEEEEECCCCT
T ss_pred cccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeEEC--------C--------------------ceEEEEEEeCCC
Confidence 000000000000000134677777664 75433211100 0 1368999995 9
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 038499 505 YMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 505 ~~t~eeid~ll~al~~v~~~ 524 (609)
++|++|+++++++|+++++.
T Consensus 482 ~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 482 AATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp TCCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765
No 36
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=2.7e-30 Score=272.08 Aligned_cols=344 Identities=11% Similarity=0.070 Sum_probs=242.2
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCC---CchhhHHHHHHHHHHHHHHHHHhCCCCCCcE-EEeCChHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTC---DSYVGQHTTNMVHEASNYIKKCLGGGQEDAM-IFCGSGTTAAI 153 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~---~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~v-ift~sGttaal 153 (609)
.+|+|+.+..+.|+.|.+++.+.+.... +.... ....+....+.++++++.+++++|++++.++ ++| +|+++++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t-~g~t~a~ 81 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQ-HTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQ-GGASTQF 81 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSST-TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEES-SHHHHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhh-hcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEC-CCchHHH
Confidence 4799999999999999999999886543 32211 1113445667889999999999999753254 565 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch--HHHHHHcCceEEEEecCC---CC-CCCHHHHHHHHhh
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN--LLSWRQSLAEVVEIGLDD---DG-LLDIEALRSKLEL 227 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~---~g-~ld~e~L~~al~~ 227 (609)
+.++..+ +++|| .|++....|++. ....+..| +++.++.+. .+ .+|+++++ ++
T Consensus 82 ~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~- 140 (362)
T 2c0r_A 82 AMIPMNF---------------LKEGQ--TANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ- 140 (362)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-
T ss_pred HHHHHhc---------------CCCCC--eEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-
Confidence 9888876 47888 566655555553 23445679 999998862 22 35666654 54
Q ss_pred hccCCCceEEEEecccCccccc-cCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCc
Q 038499 228 YKDAKRPILGSFSACSNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSP 306 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~-~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~ 306 (609)
++|+++++++++|+||.+ .|+++| ||+++++|++|+.+..++++.. .|++++|+||++| |.|+
T Consensus 141 ----~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~-----~d~~~~s~~K~~g-~~G~ 204 (362)
T 2c0r_A 141 ----DNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLNQ-----FGLVYAGAQKNLG-PSGV 204 (362)
T ss_dssp ----TTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGGG-----CSEEEEETTTTTC-CSSC
T ss_pred ----CCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchhH-----CcEEEEecccccc-CcCc
Confidence 689999999999999995 778877 8999999999999887776643 3999999999997 7789
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEE 385 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~ 385 (609)
|++++++++ ++.+.+..+ .. ..+..........+|++......+..++...+.. +.+.+.++.+
T Consensus 205 G~l~~~~~~--~~~l~~~~~--~~-----------~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 269 (362)
T 2c0r_A 205 TVVIVREDL--VAESPKHLP--TM-----------LRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANR 269 (362)
T ss_dssp EEEEEEGGG--SSSCCTTSC--GG-----------GCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred EEEEEcHHH--HhhccccCc--hH-----------HhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999998 445543211 00 0000000112334677765544333333222344 6889999999
Q ss_pred HHHHHHHHHhCCCCce-EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 386 TYIERALERLLPNQNI-KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
++++++.+.|++++++ +++.+......++++|.+.. + .+..++++.|.+ .||.+++|..|
T Consensus 270 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~L~~-~gi~~~~g~~~- 330 (362)
T 2c0r_A 270 KKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-E----------------ELEKEFVKASEQ-EGFVGLKGHRS- 330 (362)
T ss_dssp HHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-H----------------HHHHHHHHHHHH-TTEESCBCCTT-
T ss_pred HHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-c----------------chHHHHHHHHHH-CCCeeccCCCC-
Confidence 9999999999988646 77653211234566665542 1 246788888855 59988765422
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+++|||++.+++++|+++++++|+++++.
T Consensus 331 ------------------------------~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 331 ------------------------------VGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp ------------------------------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 257999999999999999999999998753
No 37
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.97 E-value=1.9e-28 Score=269.89 Aligned_cols=382 Identities=14% Similarity=0.075 Sum_probs=263.4
Q ss_pred HHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHH
Q 038499 51 SEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYI 130 (609)
Q Consensus 51 ~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~i 130 (609)
.++..+.+++.+... |. +..++....+++.++.+.+++.+.+...+.+++ ......++..++++++
T Consensus 39 ~~~~~~~~~~~i~l~--------gn-p~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~-----~~p~~~~le~~~~~~l 104 (502)
T 3hbx_A 39 KEAAYQIINDELMLD--------GN-PRLNLASFVTTWMEPECDKLIMSSINKNYVDMD-----EYPVTTELQNRCVNMI 104 (502)
T ss_dssp HHHHHHHHHHHGGGS--------CC-GGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTT-----TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccC--------CC-CCceeccccCCCCCHHHHHHHHHHhccCCCChh-----cChhHHHHHHHHHHHH
Confidence 566677777665321 11 223444444466778888988887765444332 2234678888999999
Q ss_pred HHHhCCC--CCC--cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC---ceEEEECCCCccchHHHHHHcCc
Q 038499 131 KKCLGGG--QED--AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE---RWVVFVGPHEHHSNLLSWRQSLA 203 (609)
Q Consensus 131 a~~~g~~--~~~--~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd---~~~Vlv~~~~h~s~~~~~~~~G~ 203 (609)
++++|++ +++ ..++| +|+++++..++.++... +..+. ..+|+ ++.|+++..+|+++...++..|+
T Consensus 105 a~l~g~~~~~~~~~~g~~t-~ggtea~~~a~~a~~~~----~~~~~---~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~ 176 (502)
T 3hbx_A 105 AHLFNAPLEEAETAVGVGT-VGSSEAIMLAGLAFKRK----WQNKR---KAEGKPVDKPNIVTGANVQVCWEKFARYFEV 176 (502)
T ss_dssp HHHTTCCCCSSCCCEEEEE-SSHHHHHHHHHHHHHHH----HHHHH---HHTTCCCSCCEEEEETTCCHHHHHHHHHTTC
T ss_pred HHHhCCCcccccCCcceec-CcHHHHHHHHHHHHHHH----HhHHH---HhcCCCCCCcEEEEcCCchHHHHHHHHHcCc
Confidence 9999998 432 22357 45555665554443210 00000 01233 34799999999999999999999
Q ss_pred eEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh------CCeEEEeccccCCc
Q 038499 204 EVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY------GGFACFDFAASGPY 276 (609)
Q Consensus 204 ~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~------g~~vivD~A~~~~~ 276 (609)
+++.|+++++ +.+|+++|+++|+ ++|++|++++++|+||.+.|+++|+++|+++ |+++|+|+|++.+.
T Consensus 177 ~~~~v~~~~~~~~~d~~~l~~~i~-----~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~ 251 (502)
T 3hbx_A 177 ELKEVKLSEGYYVMDPQQAVDMVD-----ENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFI 251 (502)
T ss_dssp EEEEECCBTTBCSCCHHHHHHHCC-----TTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred eeEEEecCCCcCcCCHHHHHHHHh-----hCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchh
Confidence 9999999875 8999999999998 6799999999999999999999999999999 99999999987432
Q ss_pred -------ccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC---CCCCccCCCceEeecccccccccccc
Q 038499 277 -------VEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS---FPPSTCGGGTVNYVNGFNEKDTLYLE 346 (609)
Q Consensus 277 -------~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~---~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (609)
.+.++. ..++|++++++|||+++|.|+|++++++... +.. ..+.+.++....+
T Consensus 252 ~p~~~~~~~~~~~---~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~-l~~~~~~~~~yl~~~~~~~------------- 314 (502)
T 3hbx_A 252 APFLYPELEWDFR---LPLVKSINVSGHKYGLVYAGIGWVIWRNKED-LPEELIFHINYLGADQPTF------------- 314 (502)
T ss_dssp HHHHCTTCCCSTT---STTEEEEEEETTTTTCCCSSCEEEEESSGGG-SCGGGCEEECSSSSCEEEC-------------
T ss_pred hhhhCcccccccC---CCCceEEEECcccccCCCCCeEEEEEeCHHH-hhHHhccCcccccCCCCCc-------------
Confidence 233333 2488999999999999999999999976431 111 1112222221100
Q ss_pred cccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 347 DIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 347 ~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
...++.+.... ..+++..+ ...|++.+.++..++++++.+.|+++++++++.+ .+..++++|.+.+ +.
T Consensus 315 -----~~~~sr~~~~~~a~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~~v~f~~~~-~~ 384 (502)
T 3hbx_A 315 -----TLNFSKGSSQVIAQYYQLIRL--GHEGYRNVMENCRENMIVLREGLEKTERFNIVSK--DEGVPLVAFSLKD-SS 384 (502)
T ss_dssp -----CSCCSCBSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC--SSSSSEEEEEESS-CS
T ss_pred -----cccCCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC--CCCceEEEEEecC-CC
Confidence 01122221111 22333332 3446788888999999999999999988999865 2467899998865 21
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY 504 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~ 504 (609)
.++...+.+.|.+ .||.++. |..|... . ...++||+++.
T Consensus 385 --------------~~~~~~l~~~L~~-~Gi~v~~---~~~p~~~--~---------------------~~~~lRisv~~ 423 (502)
T 3hbx_A 385 --------------CHTEFEISDMLRR-YGWIVPA---YTMPPNA--Q---------------------HITVLRVVIRE 423 (502)
T ss_dssp --------------SCCHHHHHHHHHT-TTCBCCE---EECCTTC--T---------------------TCEEEEEECCT
T ss_pred --------------cCCHHHHHHHHHh-CCcEEee---ccCCccc--C---------------------CceEEEEEeCC
Confidence 1456689999966 5998863 2212110 0 13789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhccc
Q 038499 505 YMSNEEFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 505 ~~t~eeid~ll~al~~v~~~~~~ 527 (609)
.+|++|++.++++|+++++...+
T Consensus 424 ~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 424 DFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999876654
No 38
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.97 E-value=2.5e-31 Score=289.53 Aligned_cols=362 Identities=14% Similarity=0.025 Sum_probs=248.0
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCC-------C--CchhhHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHT-------C--DSYVGQHTTNM 122 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~-------~--~~~~~~~~~~~ 122 (609)
++.+..+|++|+..+ ..+|+|++++|+.++.|.+++....-..+.++.. . ....+....++
T Consensus 65 ~~~i~~~~~~~~~~~----------~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (456)
T 2z67_A 65 DEKIKLFLKFLSMMD----------TDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYAL 134 (456)
T ss_dssp HHHHHHHHHHHHTTB----------GGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc----------ccccccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHH
Confidence 455677888887654 4689999999999998888876532111122111 0 01122246788
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSL 202 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (609)
.+++++++++++|++++ ++||++||..++...+..+. .+.+++ +|+++..+|++....++..|
T Consensus 135 ~~~~~~~la~~~g~~~~--~~~t~g~te~a~~~al~~~~-------------~~~~~~--~vi~~~~~h~s~~~~~~~~G 197 (456)
T 2z67_A 135 TNKILESFFKQLGLNVH--AIATPISTGMSISLCLSAAR-------------KKYGSN--VVIYPYASHKSPIKAVSFVG 197 (456)
T ss_dssp HHHHHHHHHHHTTCCCE--EEEESSCHHHHHHHHHHHHH-------------HHHCCC--EEEEECCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCC--EEEeCcHHHHHHHHHHHHHH-------------HhcCCC--EEEEECCCcHHHHHHHHHcC
Confidence 89999999999999764 88984444244332322221 012444 68888889999988888899
Q ss_pred ceEEEEec---CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc---
Q 038499 203 AEVVEIGL---DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY--- 276 (609)
Q Consensus 203 ~~vv~v~~---~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~--- 276 (609)
++++.++. ++++.+|+++|+++|++....+++.++++++++|+||.+.|+++|+++|++||+++|+|+|++...
T Consensus 198 ~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~ 277 (456)
T 2z67_A 198 MNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYY 277 (456)
T ss_dssp CEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHH
T ss_pred CCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHh
Confidence 99999987 667899999999999321111367888899999999999999999999999999999998866433
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
.+.+...+.. ++|++++|+|||+++|.|+|+++++ +++ +..+.+.+.|+. .+
T Consensus 278 ~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~~~--~~~l~~~~~g~~------------------------~~ 330 (456)
T 2z67_A 278 LEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDAEF--IKEISLSYPGRA------------------------SA 330 (456)
T ss_dssp HHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCHHH--HHHHHTTSCSCB------------------------CS
T ss_pred hHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCHHH--HhhcCcCCCCCC------------------------CC
Confidence 3343322211 6899999999999889999999995 455 223333332221 12
Q ss_pred ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCC
Q 038499 356 TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENT 432 (609)
Q Consensus 356 tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~ 432 (609)
++ .+. ..+++... ...|++.+.++..++++++.+.|++++ ++.++.+ . ++++|.+.. +.
T Consensus 331 ~~-~~~-~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~----~-~~v~~~~~~-~~-------- 392 (456)
T 2z67_A 331 TP-VVN-TLVSLLSM--GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDV----E-SPIASCISV-NS-------- 392 (456)
T ss_dssp HH-HHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCC----C-CSSEEEEEC-SS--------
T ss_pred CH-HHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCC----C-CeEEEEEec-cc--------
Confidence 22 222 22333332 345778889999999999999998886 7766654 2 677776632 10
Q ss_pred CCCCCCCCChHHHHHHHhhhcCc---Eec------cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 433 KTETDKPLHGPFVATLLNDLFGI---QAR------GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 433 ~~~~~~~l~~~~v~~~L~~~~GI---~v~------~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
...++.+.|.+ .|| .+. +|..|.. ...+++|+|++
T Consensus 393 --------~~~~l~~~L~~-~gi~~~rv~~~~g~f~G~~~~~---------------------------~~~~~vr~s~~ 436 (456)
T 2z67_A 393 --------DPVEIAAKLYN-LRVTGPRGIKKTDHFGNCYLGT---------------------------YTHDYIVMNAA 436 (456)
T ss_dssp --------CHHHHHHHHHH-TTEESCEEECTTCHHHHTCSSC---------------------------CSCCEEEEECC
T ss_pred --------HHHHHHHHHHH-cCCCcceEEeecCccccccccc---------------------------cCcchhhhhhh
Confidence 14578888865 465 232 1333331 01379999999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 038499 504 YYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v 521 (609)
+++|++|+++++++|+++
T Consensus 437 ~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 437 IGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp TTCCHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHH
Confidence 999999999999999864
No 39
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.97 E-value=2.6e-29 Score=274.75 Aligned_cols=405 Identities=10% Similarity=0.079 Sum_probs=261.8
Q ss_pred CCCCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHH-HHHHHhhcCCccCCCCCCchhhHHHHHH
Q 038499 44 VPKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIE-NYIINNVLPFYGNTHTCDSYVGQHTTNM 122 (609)
Q Consensus 44 ~~r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~-~ai~~~~~~~~~n~~~~~~~~~~~~~~~ 122 (609)
.|....+.++.++.+++.+.-.......| -|+.+-.++..++.+. +.+...+ |.....+..+...+++
T Consensus 46 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~l 114 (475)
T 3k40_A 46 APEKPEKWQDVMQDIERVIMPGVTHWHSP------KFHAYFPTANSYPAIVADMLSGAI-----ACIGFTWIASPACTEL 114 (475)
T ss_dssp CCSSCCCHHHHHHHHHHHTGGGCCCTTCT------TBCCSSCCCCCHHHHHHHHHHHHH-----CCCSSSCCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhccCCCCCCc------CceeeCCCCCcHHHHHHHHHHHHh-----CccccCccCCcHHHHH
Confidence 34445557888888888763211111111 2777766666555443 4443333 2222224456678899
Q ss_pred HHHHHHHHHHHhCCCCC--------CcEEEeCChHHHHHHHHHHHhcccchhhHHHH---H-HhhhcCCCceEEEECCCC
Q 038499 123 VHEASNYIKKCLGGGQE--------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREK---L-IKCLRDEERWVVFVGPHE 190 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~--------~~vift~sGttaal~~l~~~l~~~~~~~~~~~---~-~~~l~~gd~~~Vlv~~~~ 190 (609)
.+++.+++++++|.+.+ ...+||++||.+++..+..+.....+. .+.. + ...+.++ .+|+++..+
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~-~~~~~~~~~~~~~~~~--~~vi~s~~~ 191 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE-VKELHPEWDEHTILGK--LVGYCSDQA 191 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH-HHHHCTTSCHHHHHHH--EEEEEETTS
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH-hhccCcccccccccCC--eEEEECCCc
Confidence 99999999999999753 157888778887666655443211000 0000 0 0001122 379999999
Q ss_pred ccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 191 HHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 191 h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
|+++..+++..|++++.|++++++ +|+++|+++|++..... .|+++++++++|+||.+.|+++|+++|++||+++|+|
T Consensus 192 H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD 270 (475)
T 3k40_A 192 HSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVD 270 (475)
T ss_dssp CHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEe
Confidence 999999999999999999999889 99999999998532211 3678999999999999999999999999999999999
Q ss_pred ccccCCcccc-cCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCC-C--CCCccCCCceEeeccccccccc
Q 038499 270 FAASGPYVEI-DVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGS-F--PPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 270 ~A~~~~~~~i-d~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~-~--~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|++++.... ..... ....+|++++++|||+++|.|+|++++++... +.. + .+.+..... . . .
T Consensus 271 ~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~-l~~~~~~~~~yl~~~~--------~-~-~ 339 (475)
T 3k40_A 271 AAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSW-VVNAFNVDPLYLKHDM--------Q-G-S 339 (475)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGG-C----------------------------
T ss_pred HHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHH-HHHHhcCCccccCCCc--------C-C-C
Confidence 9988754321 11111 11246999999999999999999999987642 111 1 111111000 0 0 0
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
.++......+.+.+.-...+.+++... ...|++.+.++..++++++.+.|+++|+++++.+ +..++++|.+.+ .
T Consensus 340 ~~~~~~~~~~~sr~~~~l~l~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~---~~~~iv~f~~~~-~ 413 (475)
T 3k40_A 340 APDYRHWQIPLGRRFRALKLWFVLRLY--GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE---INMGLVCFRLKG-S 413 (475)
T ss_dssp ---------CCCGGGTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC---CBTTEEEEEESS-C
T ss_pred CCCcccccccCCCcccHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC---CceEEEEEEeCC-c
Confidence 000001122233332122223444443 4557889999999999999999999999999876 467899998865 2
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~ 503 (609)
. .....+.+.|++. |+.... |. .+. ...++|+++.
T Consensus 414 ~---------------~~~~~l~~~L~~~-g~~~~~------~~--~~~---------------------g~~~lR~~~~ 448 (475)
T 3k40_A 414 N---------------ERNEALLKRINGR-GHIHLV------PA--KIK---------------------DVYFLRMAIC 448 (475)
T ss_dssp H---------------HHHHHHHHHHHHH-TSCBCE------EE--EET---------------------TEEEEEEECC
T ss_pred h---------------HHHHHHHHHHHhC-CcEEEE------ee--EEC---------------------CEEEEEEEeC
Confidence 1 1356788888775 543321 10 000 1378999975
Q ss_pred -CCCCHHHHHHHHHHHHHHHHhc
Q 038499 504 -YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 504 -~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+|++||++++++|++++++.
T Consensus 449 ~~~tt~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 449 SRFTQSEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 6679999999999999988653
No 40
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=1.5e-29 Score=267.73 Aligned_cols=320 Identities=14% Similarity=0.123 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHHHhCCC----CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEEC-CCCccch
Q 038499 120 TNMVHEASNYIKKCLGGG----QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVG-PHEHHSN 194 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~----~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~ 194 (609)
.....++++.++++++.. ++ +|++| +|+++++..++..+... +++|| .|++. +..|+..
T Consensus 37 ~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~-~g~t~al~~~~~~~~~~------------~~~gd--~vlv~~~~~~~~~ 100 (385)
T 2bkw_A 37 VSIFQRVLKNTRAVFKSAAASKSQ-PFVLA-GSGTLGWDIFASNFILS------------KAPNK--NVLVVSTGTFSDR 100 (385)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGTCE-EEEEE-SCTTHHHHHHHHHHSCT------------TCSCC--EEEEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCc-eEEEc-CchHHHHHHHHHHHhcc------------CCCCC--eEEEEcCCcchHH
Confidence 445677888899988864 34 89998 66666888887766210 16788 45554 3333333
Q ss_pred -HHHHHHcCceEEEEec-CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh--CCeEEEec
Q 038499 195 -LLSWRQSLAEVVEIGL-DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDF 270 (609)
Q Consensus 195 -~~~~~~~G~~vv~v~~-~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~ 270 (609)
...++..|++++.++. +.++.+|+++|++++++ .+++++++++++||||.+.|+++|.++|++| |+++|+|+
T Consensus 101 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~ 176 (385)
T 2bkw_A 101 FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ----NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDA 176 (385)
T ss_dssp HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH----SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc----CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEEC
Confidence 3556778999999999 77888999999999984 3789999999999999999999999999999 99999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccC-CCC------CCccCCCceEeeccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLG-SFP------PSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~-~~~------p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+++.+..++++... ++|++++|+||+++||.|+|+++++++. ++ .+. +...++....+ ..
T Consensus 177 a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~G~G~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~--------~~ 243 (385)
T 2bkw_A 177 VCSIGCEEFEFDEW---GVDFALTASQKAIGAPAGLSISLCSSRF--MDYALNDSKNGHVHGYFSSLRRW--------TP 243 (385)
T ss_dssp TTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSCEEEEEECHHH--HHHHTCHHHHCCCSCSTTCHHHH--------HH
T ss_pred ccccCCcccccccc---CceEEEecCccccccCCcceEEEEcHHH--HHHHHhhccCCCCCceeecHHHH--------hh
Confidence 99988777766554 6899999999999888889999999887 33 321 22122111000 00
Q ss_pred cccccc--ccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh-CCCCceEEeCCCCC--CCcceEE
Q 038499 344 YLEDIE--ERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYIERALERL-LPNQNIKILGNTST--KRQAILS 416 (609)
Q Consensus 344 ~~~~~~--~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L-~~~p~i~v~~~~~~--~r~~~~~ 416 (609)
...... .....++++..+... +++.+. +..+.+.+.++.+++++++.+.| +++ +++++.+... ....+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~ 320 (385)
T 2bkw_A 244 IMENYEAGKGAYFATPPVQLINSLDVALKEI--LEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTA 320 (385)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEE
T ss_pred HHHhhhccCCCCCCCCCHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEE
Confidence 000000 011235666665543 334433 34478888899999999999999 988 8888754211 1345555
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
+.+ + ...++.+.|.+ .||.+++|..|.. .++
T Consensus 321 ~~~-~-------------------~~~~~~~~l~~-~gi~v~~g~~~~~----------------------------~~~ 351 (385)
T 2bkw_A 321 VYV-A-------------------DPPDVIAFLKS-HGVVIAGGIHKDI----------------------------GPK 351 (385)
T ss_dssp EEC-S-------------------CHHHHHHHHHH-TTEECBCCCCTTT----------------------------GGG
T ss_pred Eec-C-------------------CHHHHHHHHHH-CCeEEeCCCCccc----------------------------CCC
Confidence 544 3 15678888865 6999998765320 147
Q ss_pred EEEEe-cC---CCCCHHHHHHHHHHHHHHHHh
Q 038499 497 WTRIS-FP---YYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 497 ~iRls-~~---~~~t~eeid~ll~al~~v~~~ 524 (609)
++||+ ++ +.+|++|+++++++|+++++.
T Consensus 352 ~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 352 YIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 99999 66 357999999999999987643
No 41
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.97 E-value=2.3e-28 Score=269.66 Aligned_cols=427 Identities=13% Similarity=0.124 Sum_probs=266.7
Q ss_pred CCCCCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHH-HHHHHHhhcCCccCCCCCCchhhHHHHH
Q 038499 43 SVPKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYI-ENYIINNVLPFYGNTHTCDSYVGQHTTN 121 (609)
Q Consensus 43 ~~~r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v-~~ai~~~~~~~~~n~~~~~~~~~~~~~~ 121 (609)
+.|....+.++.++.+++.+.. + +.. .. .-|+.+-.++..+..+ .+.+...+. .....+..+...+.
T Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~-~--~~~--~~--p~f~~~~~~~~~~~~~~~e~l~~~~~-----~~~~~~~~~p~~~~ 135 (511)
T 3vp6_A 68 ELSDHPESLEQILVDCRDTLKY-G--VRT--GH--PRFFNQLSTGLDIIGLAGEWLTSTAN-----TNMFTYEIAPVFVL 135 (511)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHT-S--CCT--TS--TTEESSSSCCCCHHHHHHHHHHHHHC-----CCSSCTTTCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHhhc-c--CCC--CC--CCceEeecCCCcHHHHHHHHHHHHhc-----cCCCCcccCchHHH
Confidence 3344444577888888765532 2 111 21 2288887777666554 355554443 22222445667788
Q ss_pred HHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 122 MVHEASNYIKKCLGGGQE-DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
+.+++++++++++|.+.+ +.++||++||.+++..+..+.....+...++ ++...++.+|+++...|+++...++.
T Consensus 136 le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~----G~~~~~~~~v~~s~~~H~s~~~~~~~ 211 (511)
T 3vp6_A 136 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTK----GMAAVPKLVLFTSEQSHYSIKKAGAA 211 (511)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHH----CGGGSCCEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhc----CcccCCCeEEEECCCchHHHHHHHHH
Confidence 999999999999999842 3789996666665544433322100000000 11111334899999999999999999
Q ss_pred cCc---eEEEEecCCCCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 201 SLA---EVVEIGLDDDGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 201 ~G~---~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.|+ +++.|+.+.++.+|+++|+++|++.... .+|+++++++++|+||.+.|+++|+++|++||+++|+|+|++++.
T Consensus 212 ~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~ 291 (511)
T 3vp6_A 212 LGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGL 291 (511)
T ss_dssp TTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGG
T ss_pred cCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhH
Confidence 988 9999999989999999999999853211 128899999999999999999999999999999999999998876
Q ss_pred ccccCCCC---CCCCccEEEEcCCCCCCCCCCcEEEEEechh-hc-cCCCCCCccCCCceEeeccccccccccccccccc
Q 038499 277 VEIDVRSG---QTDGYDAIFLSTHKFLGGPGSPGILLMTKAL-YQ-LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 277 ~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~-~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
...+-... ...++|++++++|||+++|.++|++++++.. .. .....+.+.......+ ...++.....
T Consensus 292 ~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~--------~~~~~~~~~~ 363 (511)
T 3vp6_A 292 LMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHY--------DVSYDTGDKA 363 (511)
T ss_dssp GGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS--------CGGGCCGGGS
T ss_pred hhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCccccc--------ccccCccCCC
Confidence 53221000 1135799999999999999999999998753 11 1111122111100000 0000000111
Q ss_pred ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCC
Q 038499 352 ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGEN 431 (609)
Q Consensus 352 ~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~ 431 (609)
...+.+.-...+.+++... ...|++.+.++..++++++.+.|+++|+++++.+. .+..++++|...+ ...+....+
T Consensus 364 ~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~-~p~~~~v~f~~~p-~~~~~~~~~ 439 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG-EPEHTNVCFWYIP-QSLRGVPDS 439 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSS-CCSSSCEEEEECC-GGGSSCCCC
T ss_pred CCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC-CCCeEEEEEEEeC-ccccccccc
Confidence 2222222112223344433 44578889999999999999999999999998731 2467889998766 220000000
Q ss_pred CCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec-CCCCCHHH
Q 038499 432 TKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF-PYYMSNEE 510 (609)
Q Consensus 432 ~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~-~~~~t~ee 510 (609)
.....+.......+.+.|.++ |+.+... .+... +.+++|+++ ++.++.+|
T Consensus 440 ~~~~~~l~~~~~~l~~~L~~~-G~~~~~~----~~~~~------------------------~~~~lRi~~~~~~~t~~d 490 (511)
T 3vp6_A 440 PQRREKLHKVAPKIKALMMES-GTTMVGY----QPQGD------------------------KANFFRMVISNPAATQSD 490 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TSCEEEE----EEETT------------------------EEEEEEECCCCTTCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhc-CCEEEEE----EEeCC------------------------ceEEEEEEecCCCCCHHH
Confidence 000000000123577778765 7644321 01000 136899999 89999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 038499 511 FEFTLEALEFIAIYGQ 526 (609)
Q Consensus 511 id~ll~al~~v~~~~~ 526 (609)
|++++++|+++.+..+
T Consensus 491 i~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 491 IDFLIEEIERLGQDLH 506 (511)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999987654
No 42
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=5.7e-30 Score=268.89 Aligned_cols=344 Identities=14% Similarity=0.121 Sum_probs=246.2
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchh---hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChH-HHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYV---GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGT-TAAIK 154 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~---~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGt-taal~ 154 (609)
+|+++.+..+.|+.|.+++.+.+... .|++...+.. +....+.++++++++++++|++..++|+++ +|+ ++++.
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~-~g~gt~al~ 81 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLNF-NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFL-QGGASLQFT 81 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSS-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHHHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhhh-ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEE-CCcchHHHH
Confidence 67788777889999999999888654 5665432222 455677899999999999999733489998 666 88888
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCc-eEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHH-HHhhhccC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEER-WVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRS-KLELYKDA 231 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~-~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~-al~~~~~~ 231 (609)
.++..+. .+|++ .+|+++.++|++.. .++..| +++.+++++ ++.+|+++|++ +++
T Consensus 82 ~~~~~l~---------------~~~~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~----- 139 (360)
T 1w23_A 82 MLPMNLL---------------TKGTIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLN----- 139 (360)
T ss_dssp HHHHHHC---------------CTTCEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-----
T ss_pred HHHHHhc---------------CCCCcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccC-----
Confidence 8877663 33322 26788888887633 356679 999999876 67789999988 776
Q ss_pred CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEE
Q 038499 232 KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLM 311 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~ 311 (609)
++|+++++++++||||.+.| +|. ++||+++|+|++++.+..++++.. .|++++|+||++| |.|+|++++
T Consensus 140 ~~~k~v~~~~~~nptG~~~~--~i~---~~~~~~li~D~a~~~~~~~~~~~~-----~di~~~s~sK~~~-~~G~G~~~~ 208 (360)
T 1w23_A 140 ENDAYLHITSNNTIYGTQYQ--NFP---EINHAPLIADMSSDILSRPLKVNQ-----FGMIYAGAQKNLG-PSGVTVVIV 208 (360)
T ss_dssp TTEEEEEEESEETTTTEECS--SCC---CCCSSCEEEECTTTTTSSCCCGGG-----CSEEEEETTTTTS-CTTCEEEEE
T ss_pred CCCCEEEEeCCCCCcceecc--ccc---ccCCceEEEechhhcCCCCcCccc-----CCEEEEEcccccC-CCCcEEEEE
Confidence 68999999999999999987 333 389999999999998887766543 3899999999997 767999999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhc-CHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYI-GHEVIKKQEETYI 388 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~ 388 (609)
++++ ++.+.+.. ++.. .+ ... ...+...+++++.+.. .+++.+. +.. +.+.+.++.++++
T Consensus 209 ~~~~--~~~~~~~~-~~~~-~~---------~~~--~~~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~ 271 (360)
T 1w23_A 209 KKDL--LNTKVEQV-PTML-QY---------ATH--IKSDSLYNTPPTFSIYMLRNVLDWI--KDLGGAEAIAKQNEEKA 271 (360)
T ss_dssp EHHH--HCSCCTTC-CGGG-CH---------HHH--HHTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHH
T ss_pred cHHH--HhhcccCC-cchh-hh---------hhh--hhccCCCCCCCHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHH
Confidence 9988 45554432 1110 00 000 0123445677766543 3344432 333 5788899999999
Q ss_pred HHHHHHhCCCCce-EEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 389 ERALERLLPNQNI-KILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 389 ~~~~~~L~~~p~i-~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+++.+.|++++++ .++.+. ..+.+ ++++.+.. . .+...+.+.|.+ .||.+++|..
T Consensus 272 ~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~----------------~~~~~~~~~l~~-~gi~~~~~~~---- 328 (360)
T 1w23_A 272 KIIYDTIDESNGFYVGHAEK-GSRSLMNVTFNLRN-E----------------ELNQQFLAKAKE-QGFVGLNGHR---- 328 (360)
T ss_dssp HHHHHHHHTTTTSSEESSCG-GGBCSSEEEEECSS-H----------------HHHHHHHHHHHH-TTEESCBCCT----
T ss_pred HHHHHHHHHccCcccccCCc-hhccCcEEEEEcCC-C----------------ccHHHHHHHHHH-CCeeeecCCC----
Confidence 9999999988765 544211 12345 55555432 1 134567777754 6999876532
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|||++.+++++|+++++++|++++++
T Consensus 329 ---------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 329 ---------------------------SVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ---------------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 1378999999999999999999999998764
No 43
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.1e-28 Score=268.07 Aligned_cols=408 Identities=10% Similarity=0.034 Sum_probs=263.9
Q ss_pred CCCCcchHHHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHH-HHHHHHHhhcCCccCCCCCCchhhHHHHHH
Q 038499 44 VPKSISSSEKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRY-IENYIINNVLPFYGNTHTCDSYVGQHTTNM 122 (609)
Q Consensus 44 ~~r~~~~~~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~-v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~ 122 (609)
.|....+.++.++.+++.+.-.......| -|+.+-.++..++. +.+.+...+. .|.. .+..+...+++
T Consensus 51 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~~~~~~~~~~~~~~~~n---~~~~--~~~~~p~~~~l 119 (481)
T 4e1o_A 51 APEDPDSWDSIFGDIERIIMPGVVHWQSP------HMHAYYPALTSWPSLLGDMLADAIN---CLGF--TWASSPACTEL 119 (481)
T ss_dssp CCSSCCCHHHHHHHHHHHTGGGCCCTTST------TBCSSSCCCCCHHHHHHHHHHHHHC---CCCS--STTTCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCCCCC------CeeEeCCCCCCHHHHHHHHHHHHhC---cccC--CcCCCcHHHHH
Confidence 34444557888888888753111111111 26777655555444 4444444442 1222 24456678899
Q ss_pred HHHHHHHHHHHhCCCCC---------CcEEEeCChHHHHHHHHHHHhcccchhhHHHH--H-HhhhcCCCceEEEECCCC
Q 038499 123 VHEASNYIKKCLGGGQE---------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREK--L-IKCLRDEERWVVFVGPHE 190 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~---------~~vift~sGttaal~~l~~~l~~~~~~~~~~~--~-~~~l~~gd~~~Vlv~~~~ 190 (609)
..++.+++++++|.+.. ...+||++||.+++..++.+.....+...... + ...+.+++ +|+++..+
T Consensus 120 E~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~--~v~~s~~~ 197 (481)
T 4e1o_A 120 EMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARL--VAYASDQA 197 (481)
T ss_dssp HHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTE--EEEEETTS
T ss_pred HHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCe--EEEEcCcc
Confidence 99999999999998753 15688877788766666544321100000000 0 00112444 89999999
Q ss_pred ccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC-CCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 191 HHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA-KRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 191 h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
|+++...++..|++++.|+.++++.+|+++|+++|++.... ..|+++++++++|+||.+.|+++|+++|++||+++|+|
T Consensus 198 H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvD 277 (481)
T 4e1o_A 198 HSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHID 277 (481)
T ss_dssp CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred hHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEee
Confidence 99999999889999999999889999999999999853221 12778999999999999999999999999999999999
Q ss_pred ccccCCccccc-CCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC--CCCccCCCceEeecccccccccc
Q 038499 270 FAASGPYVEID-VRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF--PPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 270 ~A~~~~~~~id-~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
+|++++....+ .... ....+|++++++|||+++|.|+|++++++.......+ .+.+..... ......+
T Consensus 278 aA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~-------~~~~~~~ 350 (481)
T 4e1o_A 278 AAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHAN-------SGVATDF 350 (481)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTT-------TTTSCCG
T ss_pred hhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcc-------cCCCCCc
Confidence 99887643221 1111 1124599999999999999999999998764211111 111111000 0000001
Q ss_pred cccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCC
Q 038499 345 LEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTI 424 (609)
Q Consensus 345 ~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~ 424 (609)
. ......+.+.-...+.+++... ...|++.+.++..++++++.+.|+++|+++++.+ +..++++|.+.+ ..
T Consensus 351 ~---~~~~~~~r~~~~l~~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~---~~~~~v~f~~~~-~~ 421 (481)
T 4e1o_A 351 M---HWQIPLSRRFRSVKLWFVIRSF--GVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAK---RHLGLVVFRLKG-PN 421 (481)
T ss_dssp G---GGSSSSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSC---CCSSEEEEEESS-CH
T ss_pred c---cccccCCCCccHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC---CceeEEEEEeCC-ch
Confidence 0 1112223221112223344433 3457888899999999999999999999999865 367888888865 11
Q ss_pred CCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC-
Q 038499 425 NSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP- 503 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~- 503 (609)
.....+.+.|++. |+.+.++. .+. ...++|+++.
T Consensus 422 ---------------~~~~~l~~~L~~~-g~~~~~~~--------~~~---------------------g~~~lR~~~~~ 456 (481)
T 4e1o_A 422 ---------------SLTENVLKEIAKA-GRLFLIPA--------TIQ---------------------DKLIIRFTVTS 456 (481)
T ss_dssp ---------------HHHHHHHHHHHHH-CSSBCEEE--------EET---------------------TEEEEEEECCC
T ss_pred ---------------HHHHHHHHHHHhC-CeEEEEee--------EEC---------------------CEEEEEEEeCC
Confidence 1356788888765 64332110 000 1368999975
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q 038499 504 YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 504 ~~~t~eeid~ll~al~~v~~~~ 525 (609)
+.+|++|+++++++|+++++..
T Consensus 457 ~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 457 QFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 5569999999999999988753
No 44
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.97 E-value=4.3e-28 Score=266.03 Aligned_cols=399 Identities=13% Similarity=0.083 Sum_probs=258.3
Q ss_pred CCCcchHHHHHHHHHhhc-cCCCccccCCCCCCceEEecCCCCCCChH-HHHHHHHHhhcCCccCCCCCCchhhHHHHHH
Q 038499 45 PKSISSSEKKLTWLQSQI-IGKNAEFDSPFGKRRLTYADHTASGRSLR-YIENYIINNVLPFYGNTHTCDSYVGQHTTNM 122 (609)
Q Consensus 45 ~r~~~~~~~~~~~~r~~~-~g~~~~~~~p~g~~~~vyld~~a~g~~~~-~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~ 122 (609)
|....+.++.++.+++.+ ++.. ... ...|++|..+++.++ .+.+++...+ |+....+..+.....+
T Consensus 47 p~~~~~~~~~~~~~~~~~~~~~~-----~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~-----n~~~~~~~~~~~~~~l 114 (486)
T 1js3_A 47 PQEPDTFEDILQDVEKIIMPGVT-----HWH--SPYFFAYFPTASSYPAMLADMLCGAI-----GCIGFSWAASPACTEL 114 (486)
T ss_dssp CSSCCCHHHHHHHHHHTTGGGCC-----CTT--STTBCSSSCCCCCHHHHHHHHHHHHH-----CCCCSSGGGCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCC-----CCC--CCCceEeCCCCCCHHHHHHHHHHHHh-----CcCccccccChhHHHH
Confidence 334444677888888865 3321 111 122666666666554 4566665554 3333334456667888
Q ss_pred HHHHHHHHHHHhCCCCC--------CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc--CCC--------ceEE
Q 038499 123 VHEASNYIKKCLGGGQE--------DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR--DEE--------RWVV 184 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~--------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~--~gd--------~~~V 184 (609)
..++++++++++|.+.+ ..++||++||.+++..+..+.. .....++ .|| +.+|
T Consensus 115 e~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~---------~~~~~~~~~~gd~~~~~~~~~~~v 185 (486)
T 1js3_A 115 ETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAART---------KVVRRLQAASPGLTQGAVLEKLVA 185 (486)
T ss_dssp HHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHH---------HHHHHHHHHSTTCCHHHHHHHEEE
T ss_pred HHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHH---------HHhhhhhccCccchhcccCCCEEE
Confidence 88999999999999742 2588996666654444332221 0000000 132 3368
Q ss_pred EECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC-CceEEEEecccCccccccCHHHHHHHHHHhC
Q 038499 185 FVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK-RPILGSFSACSNVTGIYSDTRSIARLLHQYG 263 (609)
Q Consensus 185 lv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~-~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g 263 (609)
+++..+|+++...++..|++++.|++++++.+|+++|+++|++....+ .+.++++++++|+||.+.|+++|+++|++||
T Consensus 186 ~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~ 265 (486)
T 1js3_A 186 YASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEED 265 (486)
T ss_dssp EEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTT
T ss_pred EECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcC
Confidence 899999999999999999999999998889999999999998532111 2358999999999999999999999999999
Q ss_pred CeEEEeccccCCcccc-cCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC---CCCccCCCceEeeccc
Q 038499 264 GFACFDFAASGPYVEI-DVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF---PPSTCGGGTVNYVNGF 337 (609)
Q Consensus 264 ~~vivD~A~~~~~~~i-d~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~---~p~~~ggg~v~~~~~~ 337 (609)
+++|+|+|++.+.... ++... ...++|++++++|||+++|.++|++++++.....+.+ .+...+++....
T Consensus 266 ~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~---- 341 (486)
T 1js3_A 266 IWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSG---- 341 (486)
T ss_dssp CEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CC----
T ss_pred CEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCccccc----
Confidence 9999999988765432 22211 1136799999999999999999999998763101122 111111111000
Q ss_pred ccccccccccccccccCCCh-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEE
Q 038499 338 NEKDTLYLEDIEERESGGTP-QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILS 416 (609)
Q Consensus 338 ~~~~~~~~~~~~~r~~~gtp-~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~ 416 (609)
....+.. .....+.+ ..+. +.+++... ...|++.+.++..++++++.+.|+++|+++++.+ +..++++
T Consensus 342 --~~~~~~~---~~~~~~rr~~~~~-~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~ 410 (486)
T 1js3_A 342 --LITDYRH---WQLPLGRRFRSLK-MWFVFRMY--GVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE---VTLGLVC 410 (486)
T ss_dssp --SCCCGGG---SSSCSCCCCTHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC---CCSSEEE
T ss_pred --CCCCccc---cCCCCCCchhHHH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC---CceeEEE
Confidence 0000000 00111111 1222 23333332 3456788888999999999999999999999875 3578888
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
|.+.+ .. .....+.+.|.+. |+.+.++..+. ..+
T Consensus 411 f~~~~-~~---------------~~~~~l~~~L~~~-g~~~~~~~~~~-----------------------------~~~ 444 (486)
T 1js3_A 411 FRLKG-SD---------------GLNEALLERINSA-RKIHLVPCRLR-----------------------------GQF 444 (486)
T ss_dssp EEESS-CH---------------HHHHHHHHHHHHH-TSCBCEEEEET-----------------------------TEE
T ss_pred EEecC-hH---------------HHHHHHHHHHHhc-CCEEEEEEEEC-----------------------------CEE
Confidence 87764 10 0146788888664 76543221110 147
Q ss_pred EEEEec-CCCCCHHHHHHHHHHHHHHHHhc
Q 038499 497 WTRISF-PYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 497 ~iRls~-~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++|+++ ++++|++|+++++++|+++++..
T Consensus 445 ~lRi~~~~~~~t~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 445 VLRFAICSRKVESGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999997 77899999999999999988764
No 45
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=2e-29 Score=267.73 Aligned_cols=333 Identities=14% Similarity=0.151 Sum_probs=236.5
Q ss_pred CCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCce
Q 038499 103 PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERW 182 (609)
Q Consensus 103 ~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~ 182 (609)
..++|+.. ++.+....+.++++++.+++++|++ + .++|+++ ++++++.++.. +.+||
T Consensus 19 ~~~~~~~~--~h~~~~~~~~~~~~~~~l~~~~~~~-~-~v~~~~s-gt~a~~~~~~~----------------~~~gd-- 75 (379)
T 3ke3_A 19 VVYTDRAL--NHMSKAFQEVMNDLLSNLKTVYNAE-A-AVIIPGS-GTYGMEAVARQ----------------LTIDE-- 75 (379)
T ss_dssp SSCCTTSC--CTTSHHHHHHHHHHHHHHHHHHTCS-E-EEEEESC-HHHHHHHHHHH----------------HCTTC--
T ss_pred HhccCCCC--CCCCHHHHHHHHHHHHHHHHHhCCC-C-EEEEcCC-hhHHHHHHHHh----------------CCCCC--
Confidence 33566654 3356677899999999999999997 3 7889854 55567776544 35788
Q ss_pred EEEECCCCccchHH--HHHHcC--ceEEEEecCCC---------CCCCHHHHHHHHhhhccCCCceEEEEecccCccccc
Q 038499 183 VVFVGPHEHHSNLL--SWRQSL--AEVVEIGLDDD---------GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY 249 (609)
Q Consensus 183 ~Vlv~~~~h~s~~~--~~~~~G--~~vv~v~~~~~---------g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~ 249 (609)
.|++...+|+++.. ..+..| ++++.++.+.. +.+|+++|++++++ ++++++++++++|+||.+
T Consensus 76 ~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~----~~~~~v~~~~~~~~~G~~ 151 (379)
T 3ke3_A 76 DCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKE----DKSAIVYAPHVETSSGII 151 (379)
T ss_dssp EEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHH----HTCSEEEEESEETTTTEE
T ss_pred eEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhh----cCCcEEEEEeecCCCcee
Confidence 68888888887542 233445 47888876432 25899999999964 378999999999999999
Q ss_pred cC---HHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCcc
Q 038499 250 SD---TRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTC 326 (609)
Q Consensus 250 ~d---l~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ 326 (609)
.| +++|.++||+||+++|+|++++ +..++++..+ ++|++++|+||+++||.|+|++++++++. +.+.+...
T Consensus 152 ~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~--~~l~~~~~ 225 (379)
T 3ke3_A 152 LSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKEL---GIDVLISAPQKGWSSTPCAGLVMLSAAAI--KKVESTES 225 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHH---TCSEEEECTTTTTCSCCCEEEEEECHHHH--HHHHTCCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccccccc---CCCEEEecchhhcCCCCceEEEEECHHHH--HhhhcCCC
Confidence 99 9999999999999999999998 7777776654 78999999999999999999999999873 33322110
Q ss_pred CCCceEeecccccccccccc---cccc--cccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC
Q 038499 327 GGGTVNYVNGFNEKDTLYLE---DIEE--RESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ 399 (609)
Q Consensus 327 ggg~v~~~~~~~~~~~~~~~---~~~~--r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p 399 (609)
.+ +..+...|.. ..+. +...+|+++..+. .+++.+. +..|++.+.++.+++++++++.|.++
T Consensus 226 ~~--------~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~- 294 (379)
T 3ke3_A 226 NC--------FSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA--KEIGFDILRDAQWELGNRVRKVLTDK- 294 (379)
T ss_dssp SC--------STTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred Cc--------eeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHc-
Confidence 00 0000000100 0001 1112477766554 3445544 45589999999999999999999887
Q ss_pred ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC--hhhhhhcCCChh
Q 038499 400 NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG--PYGHHLLDLDEA 477 (609)
Q Consensus 400 ~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~--p~~~~ll~i~~~ 477 (609)
+++++.+. ..+.+++.....+ . ....+.+.|.+ .||.+++|..|.. |.
T Consensus 295 g~~~~~~~-~~~~~~i~~~~~~-~-----------------~~~~~~~~L~~-~Gi~v~~g~~~~~~~~~---------- 344 (379)
T 3ke3_A 295 GIESVAAE-GFEAPGVVVSYTE-R-----------------DDMHKGSAFAE-AGLQIAAGVPLKVGEPD---------- 344 (379)
T ss_dssp TCCBSBCT-TCBCSSEEEEECS-C-----------------HHHHSSHHHHH-TTCCCEECCCCSSCCCT----------
T ss_pred CCEecCCc-cccCceEEEEccC-C-----------------cchHHHHHHHH-CCeEEeCCccccccccC----------
Confidence 78877653 3456766554433 1 11122566644 6999998876542 11
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..+.+|+|++.++|++|+++++++|+++++..
T Consensus 345 ----------------~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 345 ----------------NFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp ----------------TCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred ----------------cCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 24799999999999999999999999988654
No 46
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=3.6e-28 Score=255.81 Aligned_cols=324 Identities=16% Similarity=0.108 Sum_probs=235.7
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
+++++|+.+... +.++.|.+++.+.+.....++ .....++++.+++++|++++ +|++| +|+++++.
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-----------~~~~~~lr~~la~~~~~~~~-~v~~~-~g~t~a~~ 98 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVETEIYP-----------DGWASSLRKEVADFYQLEEE-ELIFT-AGVDELIE 98 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC---------------CHHHHHHHHHHHTCCGG-GEEEE-SSHHHHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCC-----------CcchHHHHHHHHHHhCCChh-hEEEe-CCHHHHHH
Confidence 367888776543 356788888887664332222 12357899999999998876 89998 78888899
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++..+ +++|| .|+++.+.|+++...++..|++++.++.++++.+|+++|+++++ +++
T Consensus 99 ~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~ 156 (363)
T 3ffh_A 99 LLTRVL---------------LDTTT--NTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-----EKT 156 (363)
T ss_dssp HHHHHH---------------CSTTC--EEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-----TTE
T ss_pred HHHHHH---------------ccCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-----cCC
Confidence 888876 37888 68999999999988899999999999998888999999999998 689
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHh--CCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCC-CCcEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGI 308 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~--g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~ 308 (609)
+++++++++||||.+.|.++|.++++.+ |+++|+|++++.... ...+......+.++++.|++|++|.+ .++|+
T Consensus 157 ~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 236 (363)
T 3ffh_A 157 TIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGY 236 (363)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEE
T ss_pred CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceee
Confidence 9999999999999999999999999888 999999999873211 11111111124467888999999733 24699
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+++++++. +.+.+. ....+++......+... +.+..+.+.+.++.++++
T Consensus 237 ~~~~~~~~--~~l~~~---------------------------~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~ 285 (363)
T 3ffh_A 237 GIADKEII--RQLNIV---------------------------RPPFNTTSIGQKLAIEA--IKDQAFIGECRTSNANGI 285 (363)
T ss_dssp EEECHHHH--HHHHHT---------------------------CCSCCCBHHHHHHHHHH--HHCHHHHHHHHHHHHHHH
T ss_pred eecCHHHH--HHHHHh---------------------------CCCCCCCHHHHHHHHHH--hcCHHHHHHHHHHHHHHH
Confidence 99988872 222111 00122333332222211 122334677888888999
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|+++++++++.+ ...++++.+.. +...+.+.|.+ .||.+++|..|.
T Consensus 286 ~~l~~~l~~~~g~~~~~~----~~~~~~~~~~~-------------------~~~~~~~~l~~-~gi~v~~g~~~~---- 337 (363)
T 3ffh_A 286 KQYEAFAKRFEKVKLYPA----NGNFVLIDLGI-------------------EAGTIFSYLEK-NGYITRSGAALG---- 337 (363)
T ss_dssp HHHHHHHHHCTTCEECCC----CSSEEEEECSS-------------------CHHHHHHHHHH-TTEECEETTTTT----
T ss_pred HHHHHHHhhCCCceECCC----CCeEEEEECCC-------------------CHHHHHHHHHH-CCeEEEeCccCC----
Confidence 999999988778988754 23444443321 46788888876 599999876553
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.++++||+++ +++|+++++++|+++
T Consensus 338 -------------------------~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 338 -------------------------FPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp -------------------------CTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred -------------------------CCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 1489999997 999999999999875
No 47
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.97 E-value=2.6e-29 Score=275.46 Aligned_cols=361 Identities=14% Similarity=0.104 Sum_probs=246.1
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC---cEEEeCChHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED---AMIFCGSGTTAA 152 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~---~vift~sGttaa 152 (609)
.+.|.. +..+.++.|.+++.+.+...| ++|+...+..+....++.+.+++++++++|+++++ +|+++ +|+ ++
T Consensus 46 ~i~L~a-~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~-sGs-~a 122 (483)
T 1rv3_A 46 GLELIA-SENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY-SGS-PA 122 (483)
T ss_dssp SEECCT-TCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS-SHH-HH
T ss_pred CeEEEc-CCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC-CcH-HH
Confidence 344432 335678899999988887666 56654333333445677888999999999998642 37776 888 55
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--------HHcC--ceEEEEecC-CCCCCCHHHH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW--------RQSL--AEVVEIGLD-DDGLLDIEAL 221 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--------~~~G--~~vv~v~~~-~~g~ld~e~L 221 (609)
+..++.++ ++||| .|++++.+|+++...+ +..| .+++.++++ +++.+|+++|
T Consensus 123 n~~~~~al---------------l~pGD--~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~l 185 (483)
T 1rv3_A 123 NFAVYTAL---------------VEPHG--RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRL 185 (483)
T ss_dssp HHHHHHHH---------------TCTTC--EEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHH
T ss_pred HHHHHHHh---------------cCCCC--EEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHH
Confidence 55545544 47999 6999999999887544 2334 345555556 4788999999
Q ss_pred HHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCC
Q 038499 222 RSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 222 ~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lg 301 (609)
++++++ ++|++|++ +++|++ .+.|+++|.++|++||+++++|+||+.+....++......++|++++|+||+|+
T Consensus 186 e~~i~~----~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~ 259 (483)
T 1rv3_A 186 EENARL----FHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLR 259 (483)
T ss_dssp HHHHHH----HCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGC
T ss_pred HHHHhh----cCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCC
Confidence 999985 47899988 889998 899999999999999999999999987666555443222367999999999999
Q ss_pred CCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHH
Q 038499 302 GPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIK 381 (609)
Q Consensus 302 gp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~ 381 (609)
||.| |++++++++ .. +. ..+|....| +....+.........|+|+...+...+.++......+.+.+.
T Consensus 260 Gprg-G~i~~~~~~--~~-~~--~~~g~~~~y------~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 260 GCRA-GMIFYRRGV--RS-VD--PKTGKEILY------NLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp CCSC-EEEEEECSB--CC----------CCBC------CHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred CCCc-eEEEEcchh--hh-hc--cccCcchhh------HHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 9998 999999886 22 22 122211110 000000000011125777766544333333222233578888
Q ss_pred HHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec---
Q 038499 382 KQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR--- 458 (609)
Q Consensus 382 ~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~--- 458 (609)
++..++++++.+.|.++ |++++.+..... .+.+.+.. . .++..++.+.|. +.||.++
T Consensus 328 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~v~~~~-~---------------g~~~~~~~~~L~-~~gI~v~~~~ 387 (483)
T 1rv3_A 328 RQVVANCRALSAALVEL-GYKIVTGGSDNH--LILVDLRS-K---------------GTDGGRAEKVLE-ACSIACNKNT 387 (483)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGGGSCSSS--EEEEEGGG-G---------------TCCHHHHHHHHH-HTTEECEEEC
T ss_pred HHHHHHHHHHHHHHHhc-CCEeccCCCCCc--eEEEeccC-C---------------CCCHHHHHHHHH-hCCcEEecCC
Confidence 99999999999999887 899886521112 22222222 1 146778888885 5799999
Q ss_pred -cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCC----HHHHHHHHHHHHHHHHh
Q 038499 459 -GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMS----NEEFEFTLEALEFIAIY 524 (609)
Q Consensus 459 -~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t----~eeid~ll~al~~v~~~ 524 (609)
+|..|. + .++++||+++.++| ++|+++++++|++++..
T Consensus 388 ~pg~~~~--~--------------------------~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 388 CPGDKSA--L--------------------------RPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CSSCSCT--T--------------------------SCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcC--C--------------------------CCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 765433 1 25899999987777 99999999999998765
No 48
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.4e-28 Score=267.49 Aligned_cols=336 Identities=15% Similarity=0.082 Sum_probs=244.5
Q ss_pred HHHHHHHHHhhcCCc-cCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 91 RYIENYIINNVLPFY-GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 91 ~~v~~ai~~~~~~~~-~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
+.+.+++.+.+..+. .|+.. +.......++..++++++++++|++ ..++++++ +|+++++..++.++.-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~-~ggt~a~~~a~~a~~~------ 148 (497)
T 3mc6_A 78 DDLIHLQTIAYEKYCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTT-SGGTESLLLACLSAKM------ 148 (497)
T ss_dssp HHHHHHHHHHHHHTSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEE-SSHHHHHHHHHHHHHH------
T ss_pred hHHHHHHHHHHHHHhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEc-CcHHHHHHHHHHHHHH------
Confidence 556666666554331 23322 2233456788899999999999998 33389998 5666677777665410
Q ss_pred HHHHHhhhcCC---CceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccC
Q 038499 169 REKLIKCLRDE---ERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSN 244 (609)
Q Consensus 169 ~~~~~~~l~~g---d~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn 244 (609)
... -++| + +|+++...|+++...++..|++++.|++++ ++.+|+++|+++|+ ++++++++++++|
T Consensus 149 --~~~--~~~g~~~~--~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~p~n 217 (497)
T 3mc6_A 149 --YAL--HHRGITEP--EIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFIN-----KNTVLLVGSAPNF 217 (497)
T ss_dssp --HHH--HHSCCSSC--EEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCC-----SSEEEEEEETTCT
T ss_pred --HHH--hcCCCCCc--eEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHh-----hCCEEEEEECCCC
Confidence 000 0133 4 799999999999999999999999999988 78999999999998 5799999999999
Q ss_pred ccccccCHHHHHHHHHHhCCeEEEeccccCCcc------------cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe
Q 038499 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYV------------EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT 312 (609)
Q Consensus 245 ~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~------------~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~ 312 (609)
+||.+.|+++|+++|++||+++|+|+|++.+.. +++... .++|++++++||+++||.++|+++++
T Consensus 218 ptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~~~ 294 (497)
T 3mc6_A 218 PHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRV---PGVTSISCDTHKYGFAPKGSSVIMYR 294 (497)
T ss_dssp TTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTS---TTCCEEEEETTTTTCCCSSCEEEECS
T ss_pred CCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccC---CCCcEEEECchhhcCCCCCceeEEec
Confidence 999999999999999999999999999874322 233322 37899999999999889889999998
Q ss_pred chhhccCCC----CCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 313 KALYQLGSF----PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 313 ~~~~~l~~~----~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
++.. ... .+...++.. ......|+...... ..+++..+ ...|++.+.++..+
T Consensus 295 ~~~~--~~~~~~~~~~~~~~~~------------------~~~~~~g~~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~ 352 (497)
T 3mc6_A 295 NSDL--RMHQYYVNPAWTGGLY------------------GSPTLAGSRPGAIVVGCWATMVNM--GENGYIESCQEIVG 352 (497)
T ss_dssp SHHH--HTTTSCCBTTCTTSCB------------------CCSSSCSSCBHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CHHH--HhhhhcccccccCCCc------------------CCcCcccCCcchhHHHHHHHHHHH--hHHHHHHHHHHHHH
Confidence 8763 222 111111110 00111234333222 23444433 44567888889999
Q ss_pred HHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 387 YIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 387 l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
+++++.+.|.+ +|+++++++ ++.++++|.... ++..++.+.|.++ ||.++.+.
T Consensus 353 ~~~~l~~~L~~~~~g~~~~~~---~~~~~v~~~~~~------------------~~~~~l~~~L~~~-Gi~v~~~~---- 406 (497)
T 3mc6_A 353 AAMKFKKYIQENIPDLDIMGN---PRYSVISFSSKT------------------LNIHELSDRLSKK-GWHFNALQ---- 406 (497)
T ss_dssp HHHHHHHHHHHSCTTCEECSC---CCSSEEEEECTT------------------TTHHHHHHHHHTT-TCBCEECC----
T ss_pred HHHHHHHHHHhcCCCEEEecC---CCeeEEEEeCCC------------------CCHHHHHHHHHhC-CEEEecCC----
Confidence 99999999998 799999865 466777776543 4678899999764 99887432
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+..+|+++. .+|++|+++++++|+++++...
T Consensus 407 ----------------------------~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 407 ----------------------------KPVALHMAFT-RLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp ----------------------------SSCCEEEECC-TTTTCTHHHHHHHHHHHHHHHT
T ss_pred ----------------------------CCCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHH
Confidence 1356899998 6899999999999999987654
No 49
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=1.1e-27 Score=264.75 Aligned_cols=315 Identities=17% Similarity=0.085 Sum_probs=231.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCC--CCcE--EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQ--EDAM--IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH 191 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~--~~~v--ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h 191 (609)
......+..++++++++++|.+. + ++ ++| +|+++++..++.++.- +.. ++ .. .++| +|+++...|
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~-~v~~~~t-~ggt~a~~~al~a~~~--~g~-~~---~g-~~~d--~Vi~~~~~~ 202 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGG-TVCGTVT-SGGTESLLLAMKTYRD--WAR-AT---KG-ITAP--EAVVPVSAH 202 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTS-CCEEEEE-SSHHHHHHHHHHHHHH--HHH-HH---HC-CSSC--EEEEETTSC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccC-CcceEEc-CcHHHHHHHHHHHHHH--Hhh-hh---cC-CCCC--eEEEeCccc
Confidence 34566788889999999999874 3 45 888 6666677777766520 000 00 00 0115 799999999
Q ss_pred cchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 192 HSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 192 ~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
+++...++..|++++.|+.++++.+|+++|+++|+ +++++|++++++|+||.+.|+++|.++|++||+++|+|++
T Consensus 203 ~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~-----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea 277 (514)
T 3mad_A 203 AAFDKAAQYFGIKLVRTPLDADYRADVAAMREAIT-----PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDAC 277 (514)
T ss_dssp THHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCC-----TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred hHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhc-----cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecc
Confidence 99999999999999999999999999999999998 5899999999999999999999999999999999999999
Q ss_pred ccCCcc-----------cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCC----ccCCCceEeecc
Q 038499 272 ASGPYV-----------EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPS----TCGGGTVNYVNG 336 (609)
Q Consensus 272 ~~~~~~-----------~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~----~~ggg~v~~~~~ 336 (609)
++.+.. +++... .++|++++|+||+++||.++|+++++++.. ...... +.++..
T Consensus 278 ~~~~~~~~~~~~g~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~------ 346 (514)
T 3mad_A 278 LGGFILPWAERLGYPVPPFDFRL---EGVTSVSADTHKYGYGAKGTSVILYRRPDL--LHYQYFIAADWPGGLY------ 346 (514)
T ss_dssp TTTTTHHHHHHTTCCCCCCSTTS---TTCCEEEECTTTTTCCCSSCEEEEESSHHH--HTTTCEEESSCTTCSE------
T ss_pred cccccchhHHhcCCCCCcccccC---CCCcEEEECchhccCCCCCeEEEEEeCHHH--hccccccccccCCCcc------
Confidence 886533 233222 378999999999988888899999998773 222111 111111
Q ss_pred cccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcce
Q 038499 337 FNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAI 414 (609)
Q Consensus 337 ~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~ 414 (609)
......|+++....+ .+++..+ ...+++.+.++..++++++.+.|+++++++++.+. .++
T Consensus 347 ------------~~~~~~gs~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~~~ 408 (514)
T 3mad_A 347 ------------FSPTFAGSRPGALSATAWAAMLSL--GEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP----LWV 408 (514)
T ss_dssp ------------EESSSCSSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC----SSE
T ss_pred ------------cCCccCCCCchHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC----eEE
Confidence 111224555444332 3333333 44567888899999999999999999999998763 346
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
++|.... .+..++.+.|.++ ||.+ +|..|
T Consensus 409 ~~~~~~~------------------~~~~~l~~~L~~~-Gi~v-~g~~~------------------------------- 437 (514)
T 3mad_A 409 IAVASDE------------------LNIYQVMEEMAGR-GWRL-NGLHR------------------------------- 437 (514)
T ss_dssp EEEECSS------------------SCHHHHHHHHHTT-TCBC-EEETT-------------------------------
T ss_pred EEEeCCC------------------CCHHHHHHHHHhc-CCEe-ccCCC-------------------------------
Confidence 6665433 4678899999775 9987 33211
Q ss_pred CcEEEEecC-CCCCHHHHHHHHHHHHHHHHhcc
Q 038499 495 PGWTRISFP-YYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 495 ~g~iRls~~-~~~t~eeid~ll~al~~v~~~~~ 526 (609)
++++|+++. ..++++++++++++|+++++...
T Consensus 438 ~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~ 470 (514)
T 3mad_A 438 PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVR 470 (514)
T ss_dssp TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 468999997 44567999999999999987654
No 50
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.96 E-value=1.3e-28 Score=266.67 Aligned_cols=315 Identities=15% Similarity=0.101 Sum_probs=222.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
.+.+..+.+.++++++++++|.+++ +++++ +|+++++..+..++. +++|| +|+++..+|+++
T Consensus 102 ~~~g~~~~~~~~~~~la~~~g~~~~-~i~~~-~g~taa~ea~~~a~~--------------~~~gd--~Viv~~~~h~s~ 163 (438)
T 1wyu_A 102 VSQGVLQATFEYQTMIAELAGLEIA-NASMY-DGATALAEGVLLALR--------------ETGRM--GVLVSQGVHPEY 163 (438)
T ss_dssp GCHHHHHHHHHHHHHHHHHHTSSEE-CSCBS-SHHHHHHHHHHHHHH--------------HHTCC--EEEEETTSCHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCcc-ceEEe-CcHHHHHHHHHHHHh--------------cCCCC--EEEEcCccCHhH
Confidence 3556788899999999999999865 67787 677755555444332 35788 699999999999
Q ss_pred HHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 195 LLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 195 ~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
..+|+. .|++++.++. +++.+|+++ |+ ++|++|+++++ |+||.+.|+++|+++||+||+++++|.
T Consensus 164 ~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-----~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~ 232 (438)
T 1wyu_A 164 RAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-----EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVA 232 (438)
T ss_dssp HHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-----TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-----CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEe
Confidence 988754 7999999997 567788776 55 58999999998 999999999999999999999999775
Q ss_pred c-ccCCcccccCCCCCCCCccEEEEcCCC-----CCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccc
Q 038499 271 A-ASGPYVEIDVRSGQTDGYDAIFLSTHK-----FLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLY 344 (609)
Q Consensus 271 A-~~~~~~~id~~~~~~~~~D~v~~S~hK-----~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (609)
. ++.+....+ .. .++|++++|.|| |++|| ++|++++++++ ++.+++...|+ .+.. .......
T Consensus 233 d~~a~g~~~~~-~~---~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~--~~~l~~~~~g~-~~~~----~~~~~~~ 300 (438)
T 1wyu_A 233 DPLSLGVLKPP-GA---YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKAF--VRQLPGRLVSE-TVDV----EGRRGFI 300 (438)
T ss_dssp CTTGGGTBCCH-HH---HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGGG--GGGCCSCCEEE-EEBT----TSCEEEE
T ss_pred chhhccCcCCC-cc---CCCCEEEECCcccCCCccCCCC-CeeEEEEcHHH--HHhCCCceecc-cccc----CCCccee
Confidence 4 444433222 12 268999999888 78889 78999999988 44554433332 2110 0000001
Q ss_pred c----ccccccccCCChhH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceE
Q 038499 345 L----EDIEERESGGTPQV-----IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAIL 415 (609)
Q Consensus 345 ~----~~~~~r~~~gtp~i-----~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~ 415 (609)
+ .....+.+.+|+++ ...+.++..+......|.+.+.++.+++++++.+.|+++||++++.+. .....+
T Consensus 301 ~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~ 378 (438)
T 1wyu_A 301 LTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK--PFFNEF 378 (438)
T ss_dssp ECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS--SBCSEE
T ss_pred eeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC--CeEEEE
Confidence 1 01122444566654 222333311221234568889999999999999999999999998752 222333
Q ss_pred EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe--ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 416 SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA--RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 416 ~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v--~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
.+.. + .+..++++.|.+ .||.+ ++|..|.
T Consensus 379 ~~~~-~------------------~~~~~~~~~L~~-~gi~v~~~~~~~~~----------------------------- 409 (438)
T 1wyu_A 379 ALAL-P------------------KDPEAVRRALAE-RGFHGATPVPREYG----------------------------- 409 (438)
T ss_dssp EEEC-S------------------SCHHHHHHHHHH-TTCCCCEECCTTSC-----------------------------
T ss_pred EEeC-C------------------CCHHHHHHHHHH-CCceeccccccccC-----------------------------
Confidence 3322 1 256789999976 49998 5454332
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
++++|||++.++|++|+++++++|++++
T Consensus 410 -~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 410 -ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp -SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 3799999999999999999999998763
No 51
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.96 E-value=8.1e-28 Score=252.05 Aligned_cols=334 Identities=12% Similarity=0.065 Sum_probs=239.0
Q ss_pred ccCCCCCCceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCC
Q 038499 69 FDSPFGKRRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGS 147 (609)
Q Consensus 69 ~~~p~g~~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~s 147 (609)
+..+.|+ .+++|+.+... +.++.|.+++.+.+...+. + . .....++++.+++++|++++ +|++| +
T Consensus 10 ~~~~~~~-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~------y-~----~~~~~~l~~~la~~~~~~~~-~i~~~-~ 75 (354)
T 3ly1_A 10 FTAPSTD-NPIRINFNENPLGMSPKAQAAARDAVVKANR------Y-A----KNEILMLGNKLAAHHQVEAP-SILLT-A 75 (354)
T ss_dssp CCCCCSS-SCEECSSCCCSSCCCHHHHHHHHHTGGGTTS------C-C----HHHHHHHHHHHHHHTTSCGG-GEEEE-S
T ss_pred ccCCCCC-ceEEccCCCCCCCCCHHHHHHHHHHHhhCcC------C-C----CCchHHHHHHHHHHhCCChH-HEEEe-C
Confidence 3444443 57788766544 3677899999887753211 1 1 22467899999999998876 89998 7
Q ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhh
Q 038499 148 GTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLEL 227 (609)
Q Consensus 148 Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~ 227 (609)
|+++++..++..+ +++|| .|++..+.|+++...++..|++++.++.++++.+|+++|++++++
T Consensus 76 g~~~a~~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 138 (354)
T 3ly1_A 76 GSSEGIRAAIEAY---------------ASLEA--QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAA 138 (354)
T ss_dssp HHHHHHHHHHHHH---------------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHT
T ss_pred ChHHHHHHHHHHH---------------hCCCC--eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhcc
Confidence 8888999988876 37888 699999999999989999999999999988889999999999984
Q ss_pred hccCCCceEEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccc---cCCC-CCCC-CccEEEEcCCCCC
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEI---DVRS-GQTD-GYDAIFLSTHKFL 300 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~i---d~~~-~~~~-~~D~v~~S~hK~l 300 (609)
+ ++++++++++++||||.+.|.+++.++++. ||+++|+|++++.....- .+.. .... +.++++.|+||++
T Consensus 139 ~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 215 (354)
T 3ly1_A 139 Y---SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIH 215 (354)
T ss_dssp C---SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTT
T ss_pred C---CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhc
Confidence 2 378999999999999999999988888887 999999999987432211 1100 0111 4568899999999
Q ss_pred CCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 301 GGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 301 ggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
|.| .++|++++++++. +.+... ....+++......+... +.+....+.
T Consensus 216 g~~G~r~G~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~~~a~~~~--l~~~~~~~~ 264 (354)
T 3ly1_A 216 AMAGMRVGYAVAHPTVI--ALMGRY---------------------------VAGEKINFSGVDAALAS--MNDSAFITY 264 (354)
T ss_dssp CCGGGCCEEEECCHHHH--HHHGGG---------------------------TTCSCCCHHHHHHHHHH--TTCHHHHHH
T ss_pred cChhhhheeeecCHHHH--HHHHHh---------------------------cCCCCCCHHHHHHHHHH--hcCHHHHHH
Confidence 733 4589999988772 222111 00123333332221111 112234567
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
+.++.+++++++.+.|+++ ++.+..+ ...++++. .+ -+...+.+.|.+ .||.++
T Consensus 265 ~~~~~~~~~~~l~~~l~~~-~~~~~~~----~~~~~~~~-~~------------------~~~~~~~~~l~~-~gi~v~- 318 (354)
T 3ly1_A 265 SKKSNDVSRQILLKALEDL-KLPYLPS----EGNFVFHQ-LV------------------VPLKDYQTHMAD-AGVLIG- 318 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBCCC----CSSEEEEE-CS------------------SCHHHHHHHHHH-TTEECC-
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeECCC----CceEEEEE-CC------------------CCHHHHHHHHHH-CCEEEe-
Confidence 7788888899999988876 6665532 23444333 33 146788888876 699999
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|..|. .++++||+++ +++|+++++++|+++++..
T Consensus 319 g~~~~-----------------------------~~~~iRis~~---~~~~i~~~~~~l~~~l~~~ 352 (354)
T 3ly1_A 319 RAFPP-----------------------------ADNWCRISLG---TPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp CCCTT-----------------------------CTTEEEEECC---CHHHHHHHHHHHHHHHHTT
T ss_pred ecCCC-----------------------------CCCEEEEEcC---CHHHHHHHHHHHHHHHHhh
Confidence 76543 1489999987 8999999999999998764
No 52
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=5.9e-28 Score=254.33 Aligned_cols=323 Identities=11% Similarity=0.007 Sum_probs=235.6
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
+.+++|+.+... +.++.|.+++.+.+...+.++... ..++|+.+++++|++++ +|++| +|+++++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~-~v~~~-~g~~~a~~ 96 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDS-----------MIELKSTLAQKYKVQNE-NIIIG-AGSDQVIE 96 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTT-----------CHHHHHHHHHHHTCCGG-GEEEE-SSHHHHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCC-----------hHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHH
Confidence 367888866443 467889999988776443333221 13789999999998776 89998 78888899
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec-CCCCCCCHHHHHHHHhhhccCCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL-DDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
.++..+ +++|| .|+++.+.|+++...++..|++++.+++ ++++ +|+++|+++++ ++
T Consensus 97 ~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-----~~ 153 (365)
T 3get_A 97 FAIHSK---------------LNSKN--AFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-----DE 153 (365)
T ss_dssp HHHHHH---------------CCTTC--EEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-----TT
T ss_pred HHHHHH---------------hCCCC--EEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-----CC
Confidence 888876 37888 6999999999999999999999999998 5677 99999999998 68
Q ss_pred ceEEEEecccCccccccCHHHHHHHHH--HhCCeEEEecccc------CCcccccCCCC-CCCCccEEEEcCCCCCCCC-
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLH--QYGGFACFDFAAS------GPYVEIDVRSG-QTDGYDAIFLSTHKFLGGP- 303 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~--~~g~~vivD~A~~------~~~~~id~~~~-~~~~~D~v~~S~hK~lggp- 303 (609)
++++++++++||||.+.|.+++.++++ ++|+++|+|++++ .+..+.+.... ...+.++++.|+||++|.|
T Consensus 154 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 233 (365)
T 3get_A 154 IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGG 233 (365)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTT
T ss_pred CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcc
Confidence 999999999999999999999988888 7799999999987 32222221110 1124578899999999744
Q ss_pred CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 304 GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 304 ~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.++|++++++++. +.+... ....+++......+.. .+.+..+.+.+.++
T Consensus 234 ~r~G~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~ 282 (365)
T 3get_A 234 LRIGYGIANANII--SAFYKL---------------------------RAPFNVSNLALKAAVA--AMDDDEFTEKTLEN 282 (365)
T ss_dssp TCCEEEEECHHHH--HHHHHH---------------------------SCTTCSCHHHHHHHHH--HHTCHHHHHHHHHH
T ss_pred hheEEEEcCHHHH--HHHHHh---------------------------cCCCCcCHHHHHHHHH--HhCCHHHHHHHHHH
Confidence 3589999988772 222110 0011223222221111 11222346777888
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.+++++++.+.|+++ ++++..+ ...++++.+.. .+...+.+.|.+ .||.+++|..|
T Consensus 283 ~~~~~~~l~~~l~~~-g~~~~~~----~~~~~~~~~~~------------------~~~~~~~~~l~~-~gi~v~~g~~~ 338 (365)
T 3get_A 283 NFSQMELYKEFAKKH-NIKIIDS----YTNFITYFFDE------------------KNSTDLSEKLLK-KGIIIRNLKSY 338 (365)
T ss_dssp HHHHHHHHHHHHHHT-TCEECCC----SSSEEEEECSS------------------SCHHHHHHHHHT-TTEECEECGGG
T ss_pred HHHHHHHHHHHHHhC-CCEECCC----CCeEEEEECCC------------------CCHHHHHHHHHH-CCEEEEECccC
Confidence 888999999999887 8887654 23444433332 157788898876 59999988655
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
. ++++||+++ +++|+++++++|++++
T Consensus 339 ~------------------------------~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 339 G------------------------------LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp T------------------------------CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred C------------------------------CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 3 279999997 8999999999999875
No 53
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=1.5e-27 Score=251.46 Aligned_cols=327 Identities=13% Similarity=0.023 Sum_probs=234.8
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcC--CccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCCCcEEEeCChHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLP--FYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG-GQEDAMIFCGSGTTA 151 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~--~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~-~~~~~vift~sGtta 151 (609)
+.+++|+.+.+. +.++.|.+++.+.+.. ....+. . ...++++.+++++|. +++ +|++| +|+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~------~~~~l~~~la~~~g~~~~~-~i~~~-~g~t~ 96 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-----P------SSEALRAKLKEVMQVPAGM-EVLLG-NGSDE 96 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-----C------CHHHHHHHHHHHHTCCTTC-EEEEE-EHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-----C------cHHHHHHHHHHHhCCCCcc-eEEEc-CCHHH
Confidence 467888877654 4567888888887652 111111 1 156889999999999 444 89998 78888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~ 231 (609)
++..++..+ +++|| .|++..+.|+++...++..|++++.++.++++.+|+++|++++++
T Consensus 97 a~~~~~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---- 155 (367)
T 3euc_A 97 IISMLALAA---------------ARPGA--KVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAE---- 155 (367)
T ss_dssp HHHHHHHHT---------------CCTTC--EEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHH----
T ss_pred HHHHHHHHH---------------cCCCC--EEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhc----
Confidence 999988876 37888 699999999999989999999999999998889999999999984
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHh--CCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCC-CC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQY--GGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGP-GS 305 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~--g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp-~g 305 (609)
.+++++++++++||||.+.| +++|+++|++| |+++|+|++++.....-.+......+.++++.|+||+ +.+ .+
T Consensus 156 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r 234 (367)
T 3euc_A 156 HQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIR 234 (367)
T ss_dssp HCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCC
T ss_pred cCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccC
Confidence 27899999999999999975 66788889999 9999999997743211101111112456889999999 544 35
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|++++++++. +.+... ....+++......+. +. +......+.+.++.+
T Consensus 235 ~G~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~~~a~~-~~-l~~~~~~~~~~~~~~ 283 (367)
T 3euc_A 235 LGYVAGDPQWL--EQLDKV---------------------------RPPYNVNVLTEATAL-FA-LEHVAVLDEQAAQLR 283 (367)
T ss_dssp EEEEEECHHHH--HHHGGG---------------------------CCSSCCCHHHHHHHH-HH-HTTHHHHHHHHHHHH
T ss_pred ceeeeeCHHHH--HHHHHh---------------------------CCCCCCCHHHHHHHH-HH-hcCHHHHHHHHHHHH
Confidence 89999988772 222111 001122322222211 11 112234577788889
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.+.|+++|++++..+ ...++++. .+ +...+.+.|.+ .||.+++|..|.+
T Consensus 284 ~~~~~l~~~l~~~~g~~~~~~----~~~~~~~~-~~-------------------~~~~l~~~l~~-~gi~v~~~~~~~~ 338 (367)
T 3euc_A 284 AERSRVAEGMAAHGGVTVFPS----AANFLLAR-VP-------------------DAAQTFDRLLA-RKVLIKNVSKMHP 338 (367)
T ss_dssp HHHHHHHHHHHTSTTCEECCC----SSSEEEEE-CS-------------------CHHHHHHHHHT-TTEECEECGGGCG
T ss_pred HHHHHHHHHHHhCCCcEECCC----CCeEEEEE-CC-------------------CHHHHHHHHHH-CCeEEEECCccCC
Confidence 999999999999999986543 23343332 22 35778888855 6999998877652
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
. .++++|||++ +++|+++++++|+++++
T Consensus 339 ~---------------------------~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 339 L---------------------------LANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp G---------------------------GTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred C---------------------------CCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 1 2589999987 99999999999998753
No 54
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.96 E-value=9.9e-28 Score=254.55 Aligned_cols=353 Identities=12% Similarity=0.021 Sum_probs=245.6
Q ss_pred ccccCCCCCCceEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEE
Q 038499 67 AEFDSPFGKRRLTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMI 143 (609)
Q Consensus 67 ~~~~~p~g~~~~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vi 143 (609)
..+.+..|+ +++.+..+.. .+.++.|.+++.+.+.... +. + +....++++++++++++.+| .+++ +|+
T Consensus 19 ~~~~d~~g~-~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~--y--~~~~~~l~~~la~~l~~~~g~~~~~~-~i~ 89 (391)
T 3dzz_A 19 SIKWGVLKE-KELPMWIAEMDFKIAPEIMASMEEKLKVAA---FG--Y--ESVPAEYYKAVADWEEIEHRARPKED-WCV 89 (391)
T ss_dssp BTTTTTCCT-TCEECCSSCCSSCCCHHHHHHHHHHHTTCC---CC--C--BCCCHHHHHHHHHHHHHHHSCCCCGG-GEE
T ss_pred ccceeccCC-CceeccccCCCCCCCHHHHHHHHHHHhcCc---CC--C--CCCCHHHHHHHHHHHHHHhCCCCCHH-HEE
Confidence 334444453 5666665433 3567889999988775321 10 1 11135677888889999888 5555 899
Q ss_pred EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-C--CCCCHHH
Q 038499 144 FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-D--GLLDIEA 220 (609)
Q Consensus 144 ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~--g~ld~e~ 220 (609)
+| +|+++++..++..+ +++|| .|+++.+.|+++...++..|++++.++.+. + +.+|+++
T Consensus 90 ~~-~g~~~a~~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 151 (391)
T 3dzz_A 90 FA-SGVVPAISAMVRQF---------------TSPGD--QILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWAD 151 (391)
T ss_dssp EE-SCHHHHHHHHHHHH---------------SCTTC--EEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHH
T ss_pred EC-CCHHHHHHHHHHHh---------------CCCCC--eEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHH
Confidence 98 78888899888876 37888 699999999999999999999999999852 2 3489999
Q ss_pred HHHHHhhhccCCCceEEEEecccCccccc---cCHHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCcc--E
Q 038499 221 LRSKLELYKDAKRPILGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYD--A 291 (609)
Q Consensus 221 L~~al~~~~~~~~~~lv~~s~~sn~TG~~---~dl~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D--~ 291 (609)
|++++++ ++++++++++++||||.+ .++++|+++|++||+++|+|++++... ...++..+.....| +
T Consensus 152 l~~~l~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i 227 (391)
T 3dzz_A 152 LEEKLAT----PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVV 227 (391)
T ss_dssp HHHHHTS----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEE
T ss_pred HHHHHhc----cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEE
Confidence 9999974 579999999999999999 568889999999999999999987532 22333332111245 8
Q ss_pred EEEcCCCCCCCC-CCcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH
Q 038499 292 IFLSTHKFLGGP-GSPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF 369 (609)
Q Consensus 292 v~~S~hK~lggp-~g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~ 369 (609)
++.|+||++|.| .++|+++++ +++ .+.+... .......+++......+...+
T Consensus 228 ~~~s~sK~~g~~G~r~G~~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~~~~~a~~~~l 281 (391)
T 3dzz_A 228 SLISPSKTFNLAALHAACAIIPNPDL--RARAEES------------------------FFLAGIGEPNLLAIPAAIAAY 281 (391)
T ss_dssp EEECSHHHHTCTTTCCEEEECCSHHH--HHHHHHH------------------------HHHHTCSSCCTTHHHHHHHHH
T ss_pred EEEeChhhccccchhheEEEECCHHH--HHHHHHH------------------------HHhhccCCCCHHHHHHHHHHH
Confidence 999999999733 458999997 666 2222110 000111122222221111111
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 370 WVKEYIGHEVIKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
. ......+.+.++.+++++++.+.|++ +|++++..+. .+++.+...+ .. ..+...+.+.
T Consensus 282 ~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~-~~--------------~~~~~~~~~~ 341 (391)
T 3dzz_A 282 E-EGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN----ASYLAWVDIS-AL--------------GMNAEDFCKY 341 (391)
T ss_dssp H-HCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC----BSSEEEEECG-GG--------------CSCHHHHHHH
T ss_pred h-ccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC----ceEEEEEehh-hc--------------CCCHHHHHHH
Confidence 1 11223567788888899999999988 8999987652 3444443333 10 1367889998
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|.+++||.+++|..|..+ .++++||+++ +++++++.++++|+++++..
T Consensus 342 l~~~~gi~v~~g~~~~~~---------------------------~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 342 LREKTGLIISAGNGYRGN---------------------------GHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHCEECEESGGGCTT---------------------------GGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCEEEeCchhhCCC---------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 865579999999877632 1489999998 69999999999999988754
No 55
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=2.2e-28 Score=256.16 Aligned_cols=333 Identities=16% Similarity=0.075 Sum_probs=234.9
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.++|||++..++.++.+.+++.+.+.. |.. +......++++++++++++|.+++ +|++| +|+++++..+
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~--------~~g~~~~~~~~~~~l~~~~g~~~~-~v~~~-~g~t~a~~~~ 82 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARDNMT-QHA--------GYGQDSHCAKAARLIGELLERPDA-DVHFI-SGGTQTNLIA 82 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHHTTC-CCC--------STTCSHHHHHHHHHHHHHHTCTTS-EEEEE-SCHHHHHHHH
T ss_pred eeEEecCCCcCCCCHHHHHHHHHHHhh-ccc--------cccccHHHHHHHHHHHHHhCCCCc-cEEEe-CCchHHHHHH
Confidence 579999999899999999999887753 111 112346788999999999998766 89998 6777788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH--HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc--cCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK--DAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~--~~~ 232 (609)
+..+ +++|| .|+++.++|+++.. .++..|++++.++.+ ++.+|+++|++++++.. ...
T Consensus 83 ~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~ 144 (359)
T 1svv_A 83 CSLA---------------LRPWE--AVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMV 144 (359)
T ss_dssp HHHH---------------CCTTE--EEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSC
T ss_pred HHHH---------------hCCCC--EEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCC
Confidence 7776 36777 79999999999877 477889999999986 67899999999998520 011
Q ss_pred CceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccc---cCCcccccCCCCCC-CCccEEEEcCCCCCCCCCC
Q 038499 233 RPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAA---SGPYVEIDVRSGQT-DGYDAIFLSTHKFLGGPGS 305 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~---~~~~~~id~~~~~~-~~~D~v~~S~hK~lggp~g 305 (609)
++++++++++ ||||.+.| +++|.++|++||+++|+|+++ +.+..+.+...... ...|++++++||+ |+|.|
T Consensus 145 ~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~ 222 (359)
T 1svv_A 145 IPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFG 222 (359)
T ss_dssp EEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSC
T ss_pred CceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCc
Confidence 3889999998 78999998 888999999999999999998 44444433321100 1469999999998 66888
Q ss_pred cEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+|++++++++ ++.+.+....++. ....+.+...+ . .++ + +..+.+.+.++.+
T Consensus 223 ~g~l~~~~~~--~~~~~~~~~~~~~--------------------~~~~~~~~~~~---~-~~~-l-~~~~~~~~~~~~~ 274 (359)
T 1svv_A 223 EALIILNDAL--KPNARHLIKQRGA--------------------LMAKGWLLGIQ---F-EVL-M-KDNLFFELGAHSN 274 (359)
T ss_dssp EEEEECSGGG--CTTHHHHHHHTTC--------------------CCTTTHHHHHH---H-HHH-T-STTHHHHHHHHHH
T ss_pred eEEEEEcccH--HHHHHHHHhcCCc--------------------ccccchhhHHH---H-HHH-H-hhhhHHHHHHHHH
Confidence 9999999887 4443221100000 00011122222 1 112 2 2344677888899
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.+.| +.+++++..+. ...++ +...+ .++.+.|.+++||.+.+. .
T Consensus 275 ~~~~~l~~~L-~~~~~~~~~~~---~~~~~-~~~~~---------------------~~~~~~l~~~~gi~v~~~-~--- 324 (359)
T 1svv_A 275 KMAAILKAGL-EACGIRLAWPS---ASNQL-FPILE---------------------NTMIAELNNDFDMYTVEP-L--- 324 (359)
T ss_dssp HHHHHHHHHH-HHTTCCBSSCC---SSSEE-CBEEE---------------------HHHHHHHTTTEECEEEEE-E---
T ss_pred HHHHHHHHHh-ccCCeEEccCC---ccceE-EEEcC---------------------HHHHHHHHHhcCEEEEec-c---
Confidence 9999999999 56788877552 22332 22111 467788877669988210 0
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+. .++++||++++.++++|+++++++|+++++.
T Consensus 325 ~~--------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 325 KD--------------------------GTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp TT--------------------------TEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred cC--------------------------CCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 00 1479999999999999999999999987653
No 56
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.96 E-value=8.2e-28 Score=255.15 Aligned_cols=339 Identities=12% Similarity=0.058 Sum_probs=240.3
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
+++.+..+... +.++.|.+++.+.+... .+. + +....++++++++++++.+| .+++ +|++| +|+++++
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~~~--y--~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~~a~ 103 (391)
T 4dq6_A 33 DLLPMWVADMDFKAAPCIIDSLKNRLEQE---IYG--Y--TTRPDSYNESIVNWLYRRHNWKIKSE-WLIYS-PGVIPAI 103 (391)
T ss_dssp CSEECCSSSCSSCCCHHHHHHHHHHHTTC---CCC--C--BCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHHHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhCC---CCC--C--CCCCHHHHHHHHHHHHHHhCCCCcHH-HeEEc-CChHHHH
Confidence 56677655443 56788999998877531 111 1 11236778899999999999 5565 89998 7888889
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CC--CCCCHHHHHHHHhhhc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DD--GLLDIEALRSKLELYK 229 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~--g~ld~e~L~~al~~~~ 229 (609)
..++..+ +++|| .|++..+.|+++...++..|++++.++.+ .+ +.+|+++|+++++
T Consensus 104 ~~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~--- 163 (391)
T 4dq6_A 104 SLLINEL---------------TKAND--KIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK--- 163 (391)
T ss_dssp HHHHHHH---------------SCTTC--EEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT---
T ss_pred HHHHHHh---------------CCCCC--EEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh---
Confidence 9888876 37888 69999999999999999999999999987 33 3589999999998
Q ss_pred cCCCceEEEEecccCccccc---cCHHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC--CCccEEEEcCCCCC
Q 038499 230 DAKRPILGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT--DGYDAIFLSTHKFL 300 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~---~dl~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~--~~~D~v~~S~hK~l 300 (609)
+ ++++++++++||||.+ .++++|+++|++||+++|+|++++... ...++..+.. .+..+++.|+||++
T Consensus 164 --~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~ 240 (391)
T 4dq6_A 164 --D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTF 240 (391)
T ss_dssp --T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHH
T ss_pred --c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhc
Confidence 5 8999999999999999 457889999999999999999987632 2222322210 02338889999999
Q ss_pred CCC-CCcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHH
Q 038499 301 GGP-GSPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHE 378 (609)
Q Consensus 301 ggp-~g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~ 378 (609)
|.| .++|++++++ ++ .+.+... ......++++......+...+. ......+
T Consensus 241 g~~G~r~G~~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~ 293 (391)
T 4dq6_A 241 NIAGLQSSYVVLPDEKD--YKLLDDA------------------------FTRIDIKRNNCFSLVATEASYN-NGESWLE 293 (391)
T ss_dssp TCGGGCCEEEECCSHHH--HHHHHHH------------------------HHHTTCCCCCHHHHHHHHHHHH-HCHHHHH
T ss_pred cCcccceEEEEeCCHHH--HHHHHHH------------------------HHhhcCCCCCHHHHHHHHHHHh-chHHHHH
Confidence 734 3589999886 55 2222110 0111123444444322222221 1112356
Q ss_pred HHHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 379 VIKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 379 ~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
.+.++.+++++++.+.|++ +|++.+..+ ..+++.+...+ .. ..+...+.+.|.+++||.+
T Consensus 294 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~v 354 (391)
T 4dq6_A 294 SFLEYLESNIDFAIKYINENMPKLKVRKP----EGTYLLWVDFS-AL--------------GLSDEELESILVQKGKVAL 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEECCC----SBSSEEEEECG-GG--------------CCCHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEecCC----CccEEEEEEhh-hc--------------CCCHHHHHHHHHHhCCEEe
Confidence 7778888899999999987 789988765 23444433333 10 1467889999977669999
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
++|..|..+ .++++||+++ +++++++.++++|++++
T Consensus 355 ~~g~~~~~~---------------------------~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 355 NQGNSFGIG---------------------------GSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp EEGGGGCTT---------------------------CTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred eCchhhCCC---------------------------CCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 998877622 2589999998 69999999999998875
No 57
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.96 E-value=3.5e-28 Score=259.65 Aligned_cols=346 Identities=13% Similarity=0.034 Sum_probs=242.7
Q ss_pred ceEEecCCCCC--CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG--RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG--QEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g--~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~--~~~~vift~sGttaa 152 (609)
.++.|..+... +.++.|.+++.+.+...... .|....+..++++++++++++++|.+ ++++|++| +|++++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~-~g~~~a 114 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQ----AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIIT-PGTQGA 114 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHH----HSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCC----CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcHHH
Confidence 35666543222 46677888888777532100 01112234677888999999999975 32389998 788888
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec------CCCCCCCHHHHHHHHh
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL------DDDGLLDIEALRSKLE 226 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~------~~~g~ld~e~L~~al~ 226 (609)
+..++..+ +++|| .|+++.+.|+++...++..|++++.++. +.++.+|+++|+++++
T Consensus 115 ~~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 177 (407)
T 3nra_A 115 LFLAVAAT---------------VARGD--KVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK 177 (407)
T ss_dssp HHHHHHTT---------------CCTTC--EEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH
T ss_pred HHHHHHHh---------------CCCCC--EEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh
Confidence 99888765 37888 6999999999999999999999999998 3577899999999998
Q ss_pred hhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC--CCCccEEEEcCC
Q 038499 227 LYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ--TDGYDAIFLSTH 297 (609)
Q Consensus 227 ~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~--~~~~D~v~~S~h 297 (609)
.+++++++++++||||.+.| +++|+++|++||+++|+|++++... ....+.... ..+.++++.|+|
T Consensus 178 -----~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
T 3nra_A 178 -----AGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPS 252 (407)
T ss_dssp -----TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSS
T ss_pred -----hCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcc
Confidence 57899999999999999999 8899999999999999999987632 122222211 124568899999
Q ss_pred CCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcC
Q 038499 298 KFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIG 376 (609)
Q Consensus 298 K~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g 376 (609)
|++|.+ .++|++++++++ ++.+... ......+++.+.+. ++.+++......
T Consensus 253 K~~g~~G~r~G~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~l~~~~~~ 304 (407)
T 3nra_A 253 KTESLSGYRLGVAFGSRAI--IARMEKL------------------------QAIVSLRAAGYSQA--VLRGWFDEAPGW 304 (407)
T ss_dssp STTCCGGGCCEEEEECHHH--HHHHHHH------------------------HHHHTSSSCHHHHG--GGGGTTCCCTTH
T ss_pred cccCCCeeeEEEEEcCHHH--HHHHHHH------------------------HhhhccCCChHHHH--HHHHHHhccchH
Confidence 999833 358999998877 2222110 11111222222221 111111001123
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE
Q 038499 377 HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ 456 (609)
Q Consensus 377 ~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~ 456 (609)
.+...++.+++++++.+.|+++|++.+..+ ..+.+.+...+ .. ..+...+.+.|.+++||.
T Consensus 305 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~ 365 (407)
T 3nra_A 305 MEDRIARHQAIRDELLHVLRGCEGVFARTP----QAGSYLFPRLP-KL--------------AVAPAEFVKILRLQAGVV 365 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCBCCCC----SBSSEECCBCC-CB--------------SSCHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceeccC----CeeEEEEEeCC-CC--------------CCCHHHHHHHHHHhCCEE
Confidence 567778888899999999999888887655 23344443333 10 146778888887767999
Q ss_pred eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 457 ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 457 v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+++|..|... .++++||+++. ++++++.++++|+++++..
T Consensus 366 v~~g~~~~~~---------------------------~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 366 VTPGTEFSPH---------------------------TADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp CEEGGGTCTT---------------------------CTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred EeCchhhCCC---------------------------CCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 9998877621 25899999984 9999999999999988764
No 58
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.96 E-value=1.1e-27 Score=253.50 Aligned_cols=351 Identities=14% Similarity=0.072 Sum_probs=242.3
Q ss_pred CCccccCCCCCCceEEecCCCCC-CChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTASG-RSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQED 140 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~g-~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~ 140 (609)
.+..+.+.+|.++++.+..+... +.++.|.+++.+.+... +..+. . ..++++++++++++.+| .+++
T Consensus 13 ~g~~~~d~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~------~--~~~~~~~l~~~l~~~~g~~~~~~- 83 (383)
T 3kax_A 13 THSIKWDTYKNEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTL------P--PENIGDIICNWTKKQYNWDIQKE- 83 (383)
T ss_dssp ------CCCSSSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCC------C--CTTHHHHHHHHHHHHHCCCCCGG-
T ss_pred CCceeeeccCCCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCC------C--CHHHHHHHHHHHHHHhCCCCChh-
Confidence 33444456666677777765433 45788999998877541 11111 1 34567888999999999 5555
Q ss_pred cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC---CCCC
Q 038499 141 AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD---GLLD 217 (609)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~---g~ld 217 (609)
+|++| +|+++++..++..+ +++|| .|++..+.|+++...++..|++++.++.+.+ +.+|
T Consensus 84 ~v~~~-~g~~~a~~~~~~~l---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d 145 (383)
T 3kax_A 84 WIVFS-AGIVPALSTSIQAF---------------TKENE--SVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAID 145 (383)
T ss_dssp GEEEE-SCHHHHHHHHHHHH---------------CCTTC--EEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECC
T ss_pred hEEEc-CCHHHHHHHHHHHh---------------CCCCC--EEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEc
Confidence 89998 78888898888876 37888 6999999999999999999999999998753 3489
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC--CC
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT--DG 288 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~--~~ 288 (609)
+++|+++++ ++++++++++++||||.+.|. ++|.++|++||+++|+|++++... ...++..... .+
T Consensus 146 ~~~l~~~l~-----~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 220 (383)
T 3kax_A 146 FEHLEKQFQ-----QGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAA 220 (383)
T ss_dssp HHHHHHHHT-----TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHT
T ss_pred HHHHHHHhC-----cCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccC
Confidence 999999996 689999999999999999885 556667999999999999987532 2223322211 14
Q ss_pred ccEEEEcCCCCCCCC-CCcEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHH
Q 038499 289 YDAIFLSTHKFLGGP-GSPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAA 366 (609)
Q Consensus 289 ~D~v~~S~hK~lggp-~g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aa 366 (609)
.++++.|+||++|.| .++|++++ ++++. +.+... ......++++......+.
T Consensus 221 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~--~~~~~~------------------------~~~~~~~~~~~~~~~a~~ 274 (383)
T 3kax_A 221 RTITCMAPSKTFNIAGLQASIIIIPNEKLR--QAFTSI------------------------QYRQGFHGLNIFAYTAMQ 274 (383)
T ss_dssp TEEEEECSHHHHTCGGGCCEEEECCCHHHH--HHHHHH------------------------HHHTTCCCCCHHHHHHHH
T ss_pred cEEEEEEChhhccCcchhheEEEeCCHHHH--HHHHHH------------------------HhhcccCCCCHHHHHHHH
Confidence 458899999999733 35899988 45552 222110 011112244444332222
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH
Q 038499 367 LAFWVKEYIGHEVIKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV 445 (609)
Q Consensus 367 l~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v 445 (609)
..+. ......+.+.++.+++++++.+.|++ +|+++++.+ ..+++.+...+ .. ..+...+
T Consensus 275 ~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~ 334 (383)
T 3kax_A 275 SAYT-ECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKP----EGSFLLWIDCS-AL--------------NLSQDER 334 (383)
T ss_dssp HHTT-TCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC----SBSSEEEEECG-GG--------------CCCHHHH
T ss_pred HHHH-hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC----CceEEEEEEcc-cc--------------CCCHHHH
Confidence 1221 01122567778888889999999987 789988765 33444433333 10 1367889
Q ss_pred HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 446 ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 446 ~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.+.|.+++||.+++|..|..+ .++++||+++ +++++++.++++|++++
T Consensus 335 ~~~l~~~~gi~v~~g~~~~~~---------------------------~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 335 TKLLEEKGKIIVEPGEKYGLG---------------------------GEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHTSCEECEESGGGCTT---------------------------CTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCEEeECchhhcCC---------------------------CCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 999976679999998877632 2489999998 58999999999998865
No 59
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=8.4e-28 Score=256.67 Aligned_cols=349 Identities=12% Similarity=0.089 Sum_probs=235.8
Q ss_pred cCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEE-eCCh
Q 038499 70 DSPFGKRRLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIF-CGSG 148 (609)
Q Consensus 70 ~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vif-t~sG 148 (609)
.-|-..++.+|.++.+..+.|+.|.+++.+. ++.....+..+....+..+++++++++++|+++.++|+| | +|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t-~g 105 (398)
T 2fyf_A 32 EIPTAIKPRDGRFGSGPSKVRLEQLQTLTTT-----AAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGN-GG 105 (398)
T ss_dssp CCCGGGSCSSCBCCSSSCCCCHHHHHGGGTT-----TTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEE-TC
T ss_pred CCccccccCCccccCCCCCCCHHHHHHHhhc-----CCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeC-Cc
Confidence 3333334556777777777888888877552 111111011233456778999999999999984348888 7 77
Q ss_pred HHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH-HHHHHc--CceEEEEecCCCCCCCHHHHHHHH
Q 038499 149 TTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL-LSWRQS--LAEVVEIGLDDDGLLDIEALRSKL 225 (609)
Q Consensus 149 ttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~--G~~vv~v~~~~~g~ld~e~L~~al 225 (609)
++++++.++..+ +++| ++++...+|.... ...... |++++.++.+ ++..+.. .+
T Consensus 106 ~t~al~~~~~~l---------------~~~g---v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~~~~----~i 162 (398)
T 2fyf_A 106 ATAFWDAAAFGL---------------IDKR---SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSAPEP----QT 162 (398)
T ss_dssp HHHHHHHHHHHT---------------CSSC---EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCCCCC----CC
T ss_pred hhHHHHHHHHHh---------------cCCC---eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCCCCc----cc
Confidence 787899888876 3555 2334444553222 134444 8899999987 3432221 13
Q ss_pred hhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC
Q 038499 226 ELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS 305 (609)
Q Consensus 226 ~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g 305 (609)
+ ++|++|++++++||||.+.|+++|.++ +|+++|+|++++.+..++++. ++|++++|+||++|+++|
T Consensus 163 ~-----~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-----~~di~~~s~sK~~~~~gg 229 (398)
T 2fyf_A 163 D-----PSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-----ETDAYYFAPQKNFASDGG 229 (398)
T ss_dssp C-----TTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-----GCSEEEECTTSTTCSCSS
T ss_pred c-----CCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-----cCcEEEEecCcccCCCCc
Confidence 3 579999999999999999999998887 899999999999887776653 479999999999998877
Q ss_pred cEEEEEechhhccCCCC---------CCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHh
Q 038499 306 PGILLMTKALYQLGSFP---------PSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEY 374 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~---------p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~ 374 (609)
+|++++++++ ++.+. +....++. ...........+|+++.+.. .+++... ..
T Consensus 230 ~g~l~~~~~~--~~~l~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~t~~~~~~~a~~~al~~~--~~ 292 (398)
T 2fyf_A 230 LWLAIMSPAA--LSRIEAIAATGRWVPDFLSLPI-------------AVENSLKNQTYNTPAIATLALLAEQIDWL--VG 292 (398)
T ss_dssp EEEEEECHHH--HHHHHHHHHTTCCCCGGGCHHH-------------HHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HH
T ss_pred eEEEEECHHH--HHHhhcccccCCCCCcEEehHH-------------HhhhcccCCCCCCCCHHHHHHHHHHHHHH--HH
Confidence 9999999887 32221 11111100 00000011334677766543 3344432 33
Q ss_pred cC-HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcc-eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhh
Q 038499 375 IG-HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQA-ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDL 452 (609)
Q Consensus 375 ~g-~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~ 452 (609)
.| .+.+.++.+++++++.+.|+++|+++++.+....+.+ ++++.+.. + ++..++.+.|.++
T Consensus 293 ~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~l~~~L~~~ 355 (398)
T 2fyf_A 293 NGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD-D----------------VDAGTVAKILRAN 355 (398)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT-T----------------SCHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC-C----------------CCHHHHHHHHHHC
Confidence 44 8889999999999999999988899987521112456 66666543 2 4678899999765
Q ss_pred cCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 453 FGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 453 ~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
||.+++|.. . + .++++|||++.++|++|+++++++|++++++
T Consensus 356 -gI~v~~g~~---~-------~-------------------~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 356 -GIVDTEPYR---K-------L-------------------GRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp -TCBCCSCCT---T-------T-------------------CSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred -CcEEecCcc---c-------C-------------------CCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 999986510 0 0 1479999999999999999999999988754
No 60
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=5.6e-28 Score=257.93 Aligned_cols=344 Identities=13% Similarity=0.111 Sum_probs=235.8
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.|+++...+ +.++.|.+++.+.+.....+++. +...+.......++++.+++++|.+ ++|+++ +|++ ++..+
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~-sG~~-a~~~~ 122 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGG--TRNISGTTAYHRRLEAEIAGLHQKE--AALVFS-SAYN-ANDAT 122 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCS--BTTTBCCBHHHHHHHHHHHHHTTCS--EEEEES-CHHH-HHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCC--cCcccCChHHHHHHHHHHHHHhCCC--cEEEEC-CcHH-HHHHH
Confidence 4566655433 23457999998887654444442 2222223456788999999999974 378886 8988 34444
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+.++. .+.+|| .|+++.++|+++...++..|++++.++.+ |+++|++++++.. .+++++
T Consensus 123 ~~~l~-------------~~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~-~~~~~~ 181 (401)
T 2bwn_A 123 LSTLR-------------VLFPGL--IIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADD-PAAPKL 181 (401)
T ss_dssp HHHHH-------------HHSTTC--EEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSC-TTSCEE
T ss_pred HHHHh-------------cCCCCC--EEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhc-cCCceE
Confidence 33321 035788 79999999999999999999999999975 7899999887421 136899
Q ss_pred EEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc---C-CCCC-CCCccEEEEcCCCCCCCCCCcEEEEE
Q 038499 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID---V-RSGQ-TDGYDAIFLSTHKFLGGPGSPGILLM 311 (609)
Q Consensus 237 v~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id---~-~~~~-~~~~D~v~~S~hK~lggp~g~G~L~~ 311 (609)
+++++++||||.+.|+++|.++|++||+++|+|++++.+..... + .... ....|+++.|++|.+|+++ |+++.
T Consensus 182 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~ 259 (401)
T 2bwn_A 182 IAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA 259 (401)
T ss_dssp EEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC--CEEec
Confidence 99999999999999999999999999999999999985432110 0 0000 0135899999999999655 89988
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM-IRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
++++. +.+... .....+..++++.... +.+++.+. +..|.+.+.++.++++++
T Consensus 260 ~~~~~--~~l~~~----------------------~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~ 313 (401)
T 2bwn_A 260 SARMV--DAVRSY----------------------APGFIFSTSLPPAIAAGAQASIAFL--KTAEGQKLRDAQQMHAKV 313 (401)
T ss_dssp CHHHH--HHHHHH----------------------CHHHHTSBCCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHH
T ss_pred CHHHH--HHHHHh----------------------CcCceecCCCCHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHH
Confidence 87762 221100 0011223455553322 23444433 334567888999999999
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|+++ +++++.+ +.+++++.+.. + .+...+.+.|.++.||.++++..+..+.
T Consensus 314 l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~L~~~~gi~v~~~~~~~~~~--- 368 (401)
T 2bwn_A 314 LKMRLKAL-GMPIIDH----GSHIVPVVIGD-P----------------VHTKAVSDMLLSDYGVYVQPINFPTVPR--- 368 (401)
T ss_dssp HHHHHHHH-TCCBCCC----SSSCEEEECCC-H----------------HHHHHHHHHHHHHHCEECCEECTTTSCT---
T ss_pred HHHHHHHC-CCcccCC----CCCeEEEEeCC-h----------------HHHHHHHHHHHhcCCEEEeecCCCCCCC---
Confidence 99999877 7777654 34566666542 1 2456788888655699998765322110
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+++|++++.++|++|+++++++|+++++.
T Consensus 369 -----------------------~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 369 -----------------------GTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -----------------------TCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -----------------------CCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 1268999999999999999999999987643
No 61
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=1.7e-27 Score=254.10 Aligned_cols=336 Identities=17% Similarity=0.133 Sum_probs=234.6
Q ss_pred EEecCCCCCC----ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 79 TYADHTASGR----SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 79 vyld~~a~g~----~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
.|+|.+++.+ .++.+.+++.+.+.. +++.... +....+......++++.+++++|.+ + +|++ ++|+. ++.
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~-~-~i~~-~sGs~-a~~ 119 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMAS-VRFICGTQDSHKELEQKLAAFLGME-D-AILY-SSCFD-ANG 119 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCS-CHHHHCCBHHHHHHHHHHHHHHTCS-E-EEEE-SCHHH-HHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCC-CCcccCCcHHHHHHHHHHHHHhCCC-c-EEEe-CChHH-HHH
Confidence 4667665543 368899998887653 3333221 1122122466789999999999986 3 5555 58877 565
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC-CC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA-KR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~ 233 (609)
.++.++ +++|| .|+++.+.|++....++..|++++.++. +|+++|++++++.... .+
T Consensus 120 ~~~~~~---------------~~~gd--~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~ 177 (401)
T 1fc4_A 120 GLFETL---------------LGAED--AIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGAR 177 (401)
T ss_dssp TTHHHH---------------CCTTC--EEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHH---------------cCCCC--EEEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCC
Confidence 566655 36888 7999999999988888889999999873 4899999998742110 16
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc-c--------ccCCCCCCCCccEEEEcCCCCCCCCC
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-E--------IDVRSGQTDGYDAIFLSTHKFLGGPG 304 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~-~--------id~~~~~~~~~D~v~~S~hK~lggp~ 304 (609)
++++++++++||||.+.|+++|.++|++||+++|+|++++.+.. + .++. .+.|+++.|+||+++|+.
T Consensus 178 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~----~~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 178 HVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVM----GRVDIITGTLGKALGGAS 253 (401)
T ss_dssp SEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCT----TCCSEEEEESSSTTCSSS
T ss_pred ceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCC----cCCcEEEecchhhccCCC
Confidence 89999999999999999999999999999999999999975443 1 2222 257999999999995566
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~ 382 (609)
| |++++++++ ++.+..... .... .++++.... +.+++... +. .+.+.+
T Consensus 254 g-G~~~~~~~~--~~~l~~~~~----------------------~~~~-~~~~~~~~~~a~~~~l~~~--~~--~~~~~~ 303 (401)
T 1fc4_A 254 G-GYTAARKEV--VEWLRQRSR----------------------PYLF-SNSLAPAIVAASIKVLEMV--EA--GSELRD 303 (401)
T ss_dssp C-EEEEECHHH--HHHHHHHCH----------------------HHHH-SCCCCHHHHHHHHHHHHHH--HT--CHHHHH
T ss_pred C-EEEEcCHHH--HHHHHHhCc----------------------Ccee-CCCCCHHHHHHHHHHHHHH--hc--CHHHHH
Confidence 6 999999887 222211000 0011 123332222 23333332 21 366778
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.+++++++.+.|+++ ++++.. ...+++++.+.. . .+...+.+.|.++ ||.+++|..
T Consensus 304 ~~~~~~~~l~~~L~~~-g~~~~~----~~~~~~~~~~~~-~----------------~~~~~l~~~l~~~-gi~v~~~~~ 360 (401)
T 1fc4_A 304 RLWANARQFREQMSAA-GFTLAG----ADHAIIPVMLGD-A----------------VVAQKFARELQKE-GIYVTGFFY 360 (401)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBCC----SSSSEEEEEEEC-H----------------HHHHHHHHHHHHT-TEECCEECT
T ss_pred HHHHHHHHHHHHHHHc-CCcccC----CCCCEEEEEcCC-h----------------HHHHHHHHHHHHC-CcEEeeecC
Confidence 8889999999999877 676652 244566665532 1 2456788888764 999998876
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|..+. ..+++||+++.+++++|+++++++|+++++..
T Consensus 361 ~~~~~--------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 361 PVVPK--------------------------GQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp TSSCT--------------------------TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC--------------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 54221 14789999999999999999999999998764
No 62
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=1.7e-27 Score=253.51 Aligned_cols=341 Identities=16% Similarity=0.130 Sum_probs=239.7
Q ss_pred EEecCCCCCC----ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 79 TYADHTASGR----SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 79 vyld~~a~g~----~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
-|+|.+++.+ .++.+.+++.+.+.. ++++... +....+......++++.+++++|.+ +.|+++ +|+. ++.
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~-~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~-sGt~-a~~ 117 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMAS-VRFICGTQTIHKELEKDISEFLGTD--DTILYS-SCFD-ANG 117 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCS-CCCCCCCBHHHHHHHHHHHHHHTCS--EEEEES-CHHH-HHH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCC-cCccccCchHHHHHHHHHHHHHCCC--cEEEEC-chHH-HHH
Confidence 4677666543 357888888887764 2332221 1112233466789999999999986 256665 8876 566
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC-CC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA-KR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~ 233 (609)
.++..+ +++|| .|+++.++|+++...++..|++++.++. +|+++|++++++.... .+
T Consensus 118 ~~l~~~---------------~~~gd--~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~ 175 (399)
T 3tqx_A 118 GLFETL---------------LGPED--AIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGAR 175 (399)
T ss_dssp TTHHHH---------------CCTTC--EEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCS
T ss_pred HHHHHh---------------cCCCC--EEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCC
Confidence 666554 37888 7999999999999999999999999986 4778999988753211 17
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC----CC-CCCccEEEEcCCCCCCCCCCcEE
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS----GQ-TDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~----~~-~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
++++++++++||||.+.|+++|.++|++||+++|+|++++.+....+... .. ..+.|+++.|+||+++|+.| |+
T Consensus 176 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~ 254 (399)
T 3tqx_A 176 FKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GY 254 (399)
T ss_dssp SEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EE
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EE
Confidence 89999999999999999999999999999999999999975543222110 00 12579999999999997776 99
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
++.++++ ++.+.... ......++++..+.. .+++... + .+.+.+.++.++
T Consensus 255 ~~~~~~~--~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~ 306 (399)
T 3tqx_A 255 TSGHKEI--IEWLRNRS-----------------------RPYLFSNTVAPVIVATSLKVLELL--K-TEGPQLRKQLQE 306 (399)
T ss_dssp EEECHHH--HHHHHHHC-----------------------HHHHSSCCCCHHHHHHHHHHHHHH--H-HTHHHHHHHHHH
T ss_pred EEcCHHH--HHHHHHhC-----------------------cceeccCCCcHHHHHHHHHHHHHH--h-hccHHHHHHHHH
Confidence 9999887 22221100 000112344433322 2333321 1 467888899999
Q ss_pred HHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 387 YIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
+++++.+.|+++ ++++..+ ..+++++.+.. . .+...+.+.|.+ .||.+++++.+..+
T Consensus 307 ~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~l~~-~gi~v~~~~~~~~~ 363 (399)
T 3tqx_A 307 NSRYFRAGMEKL-GFQLVPG----NHPIIPVMLGD-A----------------QLATNMADHLLQ-EGIYVVGFSYPVVP 363 (399)
T ss_dssp HHHHHHHHHHHH-TCCBCCC----SSSEEEEEEEC-H----------------HHHHHHHHHHHH-TTEECCEECTTTSC
T ss_pred HHHHHHHHHHHc-CCCcCCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHH-CCCEEeeeCCCCCC
Confidence 999999999876 6666533 44666665543 1 246788888877 59999976433211
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
. .++++||+++++++++|+++++++|++++++.
T Consensus 364 ~--------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 364 M--------------------------GKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp T--------------------------TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred C--------------------------CCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 1 24799999999999999999999999998764
No 63
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=4.8e-27 Score=244.23 Aligned_cols=316 Identities=14% Similarity=0.077 Sum_probs=226.2
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
+++++|+.+.+. +.++.|.+++.+.+..... | . .....++|+.+++++|++++ +|++| +|+++++.
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~------y-~----~~~~~~lr~~la~~~~~~~~-~i~~t-~G~~~~l~ 82 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARINR------Y-P----FDAEPRVMRKLAEHFSCPED-NLMLV-RGIDECFD 82 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGTTS------C-C----TTHHHHHHHHHHHHHTSCGG-GEEEE-SHHHHHHH
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhhcc------C-C----CCchHHHHHHHHHHhCcCHH-HEEEe-CCHHHHHH
Confidence 468999988654 4567788888876653211 1 1 12367899999999999876 89998 89999999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
.++.. + +|| .|+++.+.|+++...++..|++++.++.++++.+|+++|+++ .++
T Consensus 83 ~~~~~----------------~-~gd--~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-------~~~ 136 (337)
T 3p1t_A 83 RISAE----------------F-SSM--RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-------SRD 136 (337)
T ss_dssp HHHHH----------------S-TTS--EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC-------CTT
T ss_pred HHHHh----------------c-CCC--eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh-------cCC
Confidence 88765 3 677 699999999999988999999999999988888999998764 357
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC--CcccccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG--PYVEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLM 311 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~--~~~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~ 311 (609)
+++++++++||||.+.|+++|.++|+++++ +++|++++. +....... ..+.++++.|+||++|.| .++|++++
T Consensus 137 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~---~~~~~i~~~S~sK~~g~~G~r~G~~~~ 212 (337)
T 3p1t_A 137 DCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLA---YGENELVFRSFSKSYGLAGLRLGALFG 212 (337)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCC---CBTTEEEEEESSSTTCCTTTCCEEEEC
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccc---cCCCEEEEeeCchhccCcchheEEEEe
Confidence 999999999999999999999999999997 566999763 11111111 125689999999999733 45799999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
++++. +.+... ....+++......+ .++ +.+....+...++..+.++++
T Consensus 213 ~~~~~--~~l~~~---------------------------~~~~~~~~~~~~a~-~~~-l~~~~~~~~~~~~~~~~~~~l 261 (337)
T 3p1t_A 213 PSELI--AAMKRK---------------------------QWFCNVGTLDLHAL-EAA-LDNDRAREAHIAKTLAQRRRV 261 (337)
T ss_dssp CHHHH--HHHHTT---------------------------SCTTCSCHHHHHHH-HHH-HTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHH--HHHHhh---------------------------cCCCCCCHHHHHHH-HHH-hCCHHHHHHHHHHHHHHHHHH
Confidence 88872 222111 01122333322211 111 212122445556667778888
Q ss_pred HHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 392 LERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 392 ~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
.+.|+++ ++++..+ ..+++++.... ...+.+.|.+ .||.+++|..|.
T Consensus 262 ~~~L~~~-g~~~~~~----~~~~~~~~~~~--------------------~~~~~~~l~~-~gi~v~~g~~~~------- 308 (337)
T 3p1t_A 262 ADALRGL-GYRVASS----EANFVLVENAA--------------------GERTLRFLRE-RGIQVKDAGQFG------- 308 (337)
T ss_dssp HHHHHHT-TCCBCCC----SSSEEEEECTT--------------------THHHHHHHHH-TTEECEEGGGGT-------
T ss_pred HHHHHHC-cCEECCC----CCeEEEEEcCC--------------------HHHHHHHHHH-CCeEEEECccCC-------
Confidence 8888877 7766543 33455544332 3567777754 699999887664
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++|||++ +++|+++++++|+++.+
T Consensus 309 ----------------------~~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 309 ----------------------LHHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp ----------------------CCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred ----------------------CCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 1489999997 89999999999998764
No 64
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.96 E-value=3.8e-27 Score=250.27 Aligned_cols=341 Identities=13% Similarity=0.053 Sum_probs=234.2
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal 153 (609)
.+++++.+... +.++.+.+++.+.+.... . .|....+..++++.+.+++.+.+|. +++ +|++| +|+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~-~y~~~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~~~a~ 103 (388)
T 1j32_A 31 DVCSFSAGEPDFNTPKHIVEAAKAALEQGK----T-RYGPAAGEPRLREAIAQKLQRDNGLCYGAD-NILVT-NGGKQSI 103 (388)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTTC----C-SCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SHHHHHH
T ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEc-CCHHHHH
Confidence 35566555433 346778888877764310 0 1111112345555666666666675 444 89998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|+++.++|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 104 ~~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----- 161 (388)
T 1j32_A 104 FNLMLAM---------------IEPGD--EVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT----- 161 (388)
T ss_dssp HHHHHHH---------------CCTTC--EEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-----
T ss_pred HHHHHHh---------------cCCCC--EEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-----
Confidence 9988876 36888 699999999999988999999999999875 56789999999997
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc----ccCCCCCC--CCccEEEEcCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE----IDVRSGQT--DGYDAIFLSTHKFLGG 302 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~----id~~~~~~--~~~D~v~~S~hK~lgg 302 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++..... ..+..+.. .+.|+++.|+||++|.
T Consensus 162 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 241 (388)
T 1j32_A 162 PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241 (388)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTC
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCC
Confidence 57899999999999999966 889999999999999999998754221 12222110 2468999999999973
Q ss_pred CC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHH
Q 038499 303 PG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIK 381 (609)
Q Consensus 303 p~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~ 381 (609)
|+ .+|++++++++ ++.+.+.. .....+++.+.+. ++.+.+.......+.+.
T Consensus 242 ~G~r~G~~~~~~~~--~~~l~~~~------------------------~~~~~~~~~~~~~--a~~~~l~~~~~~~~~~~ 293 (388)
T 1j32_A 242 TGWRVGFLAGPVPL--VKAATKIQ------------------------GHSTSNVCTFAQY--GAIAAYENSQDCVQEML 293 (388)
T ss_dssp TTTCCEEEECCHHH--HHHHHHHH------------------------HTTTCSCCHHHHH--HHHHHHHSCSHHHHHHH
T ss_pred cccceEEEEeCHHH--HHHHHHHH------------------------hhcccCCCHHHHH--HHHHHHhCCcHHHHHHH
Confidence 32 38999999887 22221110 0011223333332 22222210112356777
Q ss_pred HHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc
Q 038499 382 KQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC 461 (609)
Q Consensus 382 ~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~ 461 (609)
++.+++++++.+.|+++|++++..+ ..+++.+...+ .. ..+...+.+.|.+++||.+++|.
T Consensus 294 ~~~~~~~~~l~~~L~~~~g~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~v~~g~ 354 (388)
T 1j32_A 294 AAFAERRRYMLDALNAMPGLECPKP----DGAFYMFPSIA-KT--------------GRSSLDFCSELLDQHQVATVPGA 354 (388)
T ss_dssp HHHHHHHHHHHHHHHTCTTCBCCCC----CBTTEECCBCG-GG--------------TCCHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHHHHHhhCCCCcccCC----CeeEEEEEecC-CC--------------CCCHHHHHHHHHHhCCEEEeChh
Confidence 8888899999999998888887654 23444433222 10 13567888888765799999886
Q ss_pred ccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 462 ACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 462 ~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.|.. ++++||+++ +++++++.++++|+++++.
T Consensus 355 ~~~~-----------------------------~~~iRis~~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 355 AFGA-----------------------------DDCIRLSYA--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp GGTC-----------------------------TTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred hhCC-----------------------------CCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 5541 378999997 6999999999999988764
No 65
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=1.6e-26 Score=249.21 Aligned_cols=336 Identities=13% Similarity=0.061 Sum_probs=237.8
Q ss_pred EecCCCCC----CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 80 YADHTASG----RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 80 yld~~a~g----~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
|+|.+++. ..++.+.+++.+.+..+ +. +...+....+......++++.+++++|.+ +.+++ ++|+++ +..
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~~-~~-~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~-~sGs~a-~~~ 139 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEKF-GS-GTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVF-STGYMA-NLG 139 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHHH-CS-CCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEE-SCHHHH-HHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHHh-CC-CCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEe-cCcHHH-HHH
Confidence 55655543 35678889888877542 21 11111122223466788999999999975 24555 588885 444
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++.++ +++|| .|+++...|.++...++..|++++.++. +|+++|++++++... .+++
T Consensus 140 al~~l---------------~~~gd--~vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~-~~~~ 196 (427)
T 2w8t_A 140 IISTL---------------AGKGE--YVILDADSHASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPK-EPAK 196 (427)
T ss_dssp HHHHH---------------SCTTC--EEEEETTCCHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCS-SSCE
T ss_pred HHHHh---------------cCCCC--EEEECCcccHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccC-CCCe
Confidence 55554 36888 7999999999999999999999998874 599999999984211 1789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc---------ccCCCCCCCCccEEEEcCCCCCCCCCCc
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE---------IDVRSGQTDGYDAIFLSTHKFLGGPGSP 306 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~---------id~~~~~~~~~D~v~~S~hK~lggp~g~ 306 (609)
+|++++++|+||.+.|+++|.++|++||+++|+|++++.+... .++. .++|+++.|+||++| +.|
T Consensus 197 ~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~----~~~di~~~s~sK~~g-~~g- 270 (427)
T 2w8t_A 197 LVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE----GQIDFVVGTFSKSVG-TVG- 270 (427)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCT----TCCSEEEEESSSTTC-SCC-
T ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCC----cCCcEEEecchhhhc-cCC-
Confidence 9999999999999999999999999999999999999876543 2332 267999999999998 555
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQE 384 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~ 384 (609)
|++++++++ ++.+.+.. . ...+ .++.+..+.. .+++... + ..+.+.++.
T Consensus 271 G~v~~~~~l--~~~l~~~~----------------~------~~~~-~~~~~~~~~aa~~~al~~~--~--~~~~~~~~~ 321 (427)
T 2w8t_A 271 GFVVSNHPK--FEAVRLAC----------------R------PYIF-TASLPPSVVATATTSIRKL--M--TAHEKRERL 321 (427)
T ss_dssp EEEEECCTT--GGGGGGTC----------------H------HHHS-SCCCCHHHHHHHHHHHHHH--T--SCHHHHHHH
T ss_pred CEEEeCHHH--HHHHHHhc----------------c------cccc-cCCCCHHHHHHHHHHHHHH--h--cCHHHHHHH
Confidence 999999887 33332110 0 0001 2233333332 2333332 1 246778888
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
+++++++.+.|+++ ++.+..+. ...+++++.+.. . .....+.+.|.++ ||.+++|..|.
T Consensus 322 ~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~~~~-~----------------~~~~~l~~~L~~~-Gi~v~~~~~~~ 380 (427)
T 2w8t_A 322 WSNARALHGGLKAM-GFRLGTET--CDSAIVAVMLED-Q----------------EQAAMMWQALLDG-GLYVNMARPPA 380 (427)
T ss_dssp HHHHHHHHHHHHHH-TCEESCSS--CCSSEEEEEESS-H----------------HHHHHHHHHHHHT-TEECEEECTTT
T ss_pred HHHHHHHHHHHHHc-CCcccCCC--CCCCEEEEEECC-H----------------HHHHHHHHHHHHC-CeEEeeeCCCC
Confidence 99999999999877 78877432 245666666543 1 2356788888775 99999876554
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.|. ..+++||+++.++|++|+++++++|+++++...
T Consensus 381 ~~~--------------------------~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 381 TPA--------------------------GTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp SCT--------------------------TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCC--------------------------CCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 221 147999999999999999999999999987643
No 66
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.95 E-value=1.6e-26 Score=247.87 Aligned_cols=346 Identities=14% Similarity=0.004 Sum_probs=235.8
Q ss_pred CceEEecCCC-----CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------------CCC
Q 038499 76 RRLTYADHTA-----SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------------GGQ 138 (609)
Q Consensus 76 ~~~vyld~~a-----~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------------~~~ 138 (609)
+++++|+.+. ..+.++.+.+++.+.+.... .+ .|.. .....++|+.++++++ .++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~--~~--~y~~----~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~ 104 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQE--CN--GYFP----TVGSPEAREAVATWWRNSFVHKEELKSTIVK 104 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTC--SS--SCCC----TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCc--cC--CcCC----CCCCHHHHHHHHHHHHhhhcccccCCCCCCc
Confidence 3577887765 35677889999888775310 01 0111 1124567777777777 555
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCC
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLL 216 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~l 216 (609)
+ +|++| +|+++++..++.++ +++|| .|++..++|+++...++..|++++.++.+++ +.+
T Consensus 105 ~-~v~~~-~g~~~al~~~~~~l---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 165 (416)
T 1bw0_A 105 D-NVVLC-SGGSHGILMAITAI---------------CDAGD--YALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEA 165 (416)
T ss_dssp G-GEEEE-SHHHHHHHHHHHHH---------------CCTTC--EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEE
T ss_pred c-eEEEe-CChHHHHHHHHHHh---------------CCCCC--EEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCC
Confidence 5 89998 78888999888876 36888 6999999999998888899999999998653 568
Q ss_pred CHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc--------ccccCCCCC
Q 038499 217 DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY--------VEIDVRSGQ 285 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~--------~~id~~~~~ 285 (609)
|+++|+++++ ++++++++++++||||.+.| +++|+++|++||+++|+|++++... ...++..+.
T Consensus 166 d~~~l~~~l~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 240 (416)
T 1bw0_A 166 DLDEIRRLKD-----DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE 240 (416)
T ss_dssp CHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC
T ss_pred CHHHHHHHhc-----cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc
Confidence 9999999997 57899999999999999999 8899999999999999999987521 112232221
Q ss_pred CCCccEEEEcCCCCCCCCC-CcEEEEEech--hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH
Q 038499 286 TDGYDAIFLSTHKFLGGPG-SPGILLMTKA--LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362 (609)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~-g~G~L~~~~~--~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~ 362 (609)
..+.++++.|+||++++|+ .+|+++++++ + ++.+... .. .......+++....
T Consensus 241 ~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~--~~~~~~~--------------------~~--~~~~~~~~~~~~~~ 296 (416)
T 1bw0_A 241 TTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGN--GPSFLEG--------------------LK--RVGMLVCGPCTVVQ 296 (416)
T ss_dssp CSCCEEEEEESTTTTSCGGGCCEEEEEECTTCS--CHHHHHH--------------------HH--HHHHHHTCSCHHHH
T ss_pred CCCcEEEEecchhhCCCCCceEEEEEeeCchhh--HHHHHHH--------------------HH--HHhccccCCCcHHH
Confidence 1223577889999987653 4899999875 3 1111000 00 00001122333222
Q ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 363 IRAALAFWVKE--YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 363 ~~aal~~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
..+. +. +.. ..+.+.+.++.+++++++.+.|+++|++.+..+. ...++++.+.. .. -....
T Consensus 297 ~a~~-~~-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~~~~~~~~~~~-~~-----------~~~~~ 359 (416)
T 1bw0_A 297 AALG-EA-LLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPR---GAMYLMSRIDL-EK-----------YRDIK 359 (416)
T ss_dssp HHHH-HH-HHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCC---BTTEEEEEECG-GG-----------BSSCC
T ss_pred HHHH-HH-HhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC---eeEEEEEeCCH-HH-----------cCCCC
Confidence 2111 11 211 2345677888889999999999998899887542 23344444432 10 00012
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
+...+.+.|.+++||.+++|..|. .++++||+++ +++++++.+++.|.+
T Consensus 360 ~~~~~~~~l~~~~gi~v~~g~~f~-----------------------------~~~~iRis~~--~~~e~l~~~l~~l~~ 408 (416)
T 1bw0_A 360 TDVEFFEKLLEEENVQVLPGTIFH-----------------------------APGFTRLTTT--RPVEVYREAVERIKA 408 (416)
T ss_dssp SHHHHHHHHHHHHCEECEEGGGGT-----------------------------CTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCEEEecccccC-----------------------------CCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 467787877555799999887654 1479999996 689999999999999
Q ss_pred HHHhc
Q 038499 521 IAIYG 525 (609)
Q Consensus 521 v~~~~ 525 (609)
+++..
T Consensus 409 ~l~~~ 413 (416)
T 1bw0_A 409 FCQRH 413 (416)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88654
No 67
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.95 E-value=1.2e-26 Score=243.72 Aligned_cols=324 Identities=14% Similarity=0.050 Sum_probs=230.3
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+++.++.+... +.++.+.+++.+.+......++. ...++++.+++++|++++ +|++| +|+++++..
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~-~i~~~-~g~t~al~~ 93 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDV-----------NYRRLNKSIENYLKLKDI-GIVLG-NGASEIIEL 93 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCT-----------TCHHHHHHHHHHHTCCSC-EEEEE-SSHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc-----------cHHHHHHHHHHHhCCCcc-eEEEc-CCHHHHHHH
Confidence 56666655332 35678888888777643332221 146789999999998876 89998 778888887
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++.. + | .|++..+.|+++...++..|++++.++.++++.+++++|+++++ + ++
T Consensus 94 ~~~~----------------~---d--~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-----~-~~ 146 (361)
T 3ftb_A 94 SISL----------------F---E--KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-----D-VD 146 (361)
T ss_dssp HHTT----------------C---S--EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-----T-CS
T ss_pred HHHH----------------c---C--cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-----C-CC
Confidence 7653 2 4 68899999999999999999999999999887899999999998 5 88
Q ss_pred EEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc--ccCCCC-CCCCccEEEEcCCCCCCCC-CCcEE
Q 038499 236 LGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE--IDVRSG-QTDGYDAIFLSTHKFLGGP-GSPGI 308 (609)
Q Consensus 236 lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~--id~~~~-~~~~~D~v~~S~hK~lggp-~g~G~ 308 (609)
++++++++||||.+.| +++|+++|++||+++|+|++++..... ...... ...+.++++.|+||++|.| .++|+
T Consensus 147 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~ 226 (361)
T 3ftb_A 147 SVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGY 226 (361)
T ss_dssp EEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEE
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeE
Confidence 9999999999999987 556788888999999999998743321 111111 1123457788999999743 35799
Q ss_pred EE-EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 309 LL-MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 309 L~-~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
++ .++++. +.+... ....+++......+... +.+..+.+.+.++.+++
T Consensus 227 ~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~ 275 (361)
T 3ftb_A 227 GITNNKEIA--AKIKAK---------------------------QNPWNINCFAEMAAINC--LKDTNYIEESLLWIKKE 275 (361)
T ss_dssp EEESCHHHH--HHHHTT---------------------------SCTTCSCHHHHHHHHHT--SSCHHHHHHHHHHHHHH
T ss_pred EEeCCHHHH--HHHHhh---------------------------CCCCCCCHHHHHHHHHH--hcCHHHHHHHHHHHHHH
Confidence 88 566662 222111 00123333332222111 11223456778888889
Q ss_pred HHHHHHHhCCCCceE-EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCCh
Q 038499 388 IERALERLLPNQNIK-ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGP 466 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~-v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p 466 (609)
++++.+.|+++|++. +..+ ..+++++.+.. .+...+.+.|.++ ||.+++|..|.+.
T Consensus 276 ~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~------------------~~~~~l~~~l~~~-gi~v~~g~~~~~~ 332 (361)
T 3ftb_A 276 RKRFIEELNKIGFIKRVFSP----HANFVLCRLEN------------------ISGEKLYDSLLKE-DIVIRRCCNFIGL 332 (361)
T ss_dssp HHHHHHHHHHSSSEEEEECC----SSSEEEEEESS------------------SCHHHHHHHHHTT-TEECEECTTSTTC
T ss_pred HHHHHHHHHhCCCCceecCC----CCeEEEEEcCC------------------CCHHHHHHHHHHC-CeEEeeCccCCCC
Confidence 999999999899998 7654 33555554433 3577899999775 9999998877521
Q ss_pred hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 467 YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 467 ~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|++++ +.+|+++++++|+.+.+.
T Consensus 333 ---------------------------~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 333 ---------------------------DDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp ---------------------------CTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------CCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 2589999997 899999999999988753
No 68
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=8.9e-27 Score=248.35 Aligned_cols=328 Identities=15% Similarity=0.123 Sum_probs=232.4
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.+.+++.+.+... .+... .+....+....++++++++++++|.+ ++++| +|+++++..++.++
T Consensus 58 ~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~---~v~~~-~ggt~a~~~~~~~~-------- 123 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKY-GTGCA-GSRFLNGTLDIHVELEEKLSAYVGKE---AAILF-STGFQSNLGPLSCL-------- 123 (398)
T ss_dssp GCHHHHHHHHHHHHHH-CSCCC-SBTTTTCCCHHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHS--------
T ss_pred CCHHHHHHHHHHHHHc-CCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH--------
Confidence 5678888888777532 11111 11112223467889999999999973 78998 45556888887776
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGI 248 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~ 248 (609)
+++|| .|+++.+.|+++...++..|++++.++. +|+++|++++++... ++++++++++++||||.
T Consensus 124 -------~~~gd--~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~-~~~~~v~~~~~~nptG~ 188 (398)
T 3a2b_A 124 -------MGRND--YILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE-DSAKLICTDGIFSMEGD 188 (398)
T ss_dssp -------SCTTC--EEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS-SSCEEEEEESBCTTTCC
T ss_pred -------hCCCC--EEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc-CCceEEEEeCCCCCCCC
Confidence 37888 7999999999999999999999999986 589999999984210 17899999999999999
Q ss_pred ccCHHHHHHHHHHhCCeEEEeccccCCcc---cccCCC-CC-CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCC
Q 038499 249 YSDTRSIARLLHQYGGFACFDFAASGPYV---EIDVRS-GQ-TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPP 323 (609)
Q Consensus 249 ~~dl~~I~~la~~~g~~vivD~A~~~~~~---~id~~~-~~-~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p 323 (609)
+.|+++|.++|++||+++|+|++++.+.. ..++.. .. .+++|+++.|+||++| |.| |++++++++ ++.+..
T Consensus 189 ~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~~~--~~~l~~ 264 (398)
T 3a2b_A 189 IVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDADV--IDFLKH 264 (398)
T ss_dssp BCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECHHH--HHHHHH
T ss_pred ccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCHHH--HHHHHH
Confidence 99999999999999999999999976532 121111 00 1136999999999998 666 999999887 222211
Q ss_pred CccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 324 STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
.. ......++++..+.. .+++... + ..+.+.++.+++++++.+.|+++ ++
T Consensus 265 ~~-----------------------~~~~~~~~~~~~~~a~~~~~l~~~--~--~~~~~~~~~~~~~~~l~~~L~~~-g~ 316 (398)
T 3a2b_A 265 NA-----------------------RSVMFSASMTPASVASTLKALEII--Q--NEPEHIEKLWKNTDYAKAQLLDH-GF 316 (398)
T ss_dssp HC-----------------------HHHHSSBCCCHHHHHHHHHHHHHH--H--HCTHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hc-----------------------ccceecCCCCHHHHHHHHHHHHHH--h--hCHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 00 000112333444432 2333332 1 13466778888899999999877 77
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHH
Q 038499 402 KILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQ 481 (609)
Q Consensus 402 ~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~ 481 (609)
++..+ ...++++.+.. + .+...+.+.|.++ ||.+++|..|..+.
T Consensus 317 ~~~~~----~g~~~~~~~~~-~----------------~~~~~l~~~l~~~-gi~v~~~~~~~~~~-------------- 360 (398)
T 3a2b_A 317 DLGAT----ESPILPIFIRS-N----------------EKTFWVTKMLQDD-GVFVNPVVSPAVPA-------------- 360 (398)
T ss_dssp CBCSC----CSSEEEEECCC-H----------------HHHHHHHHHHHHT-TEECEEECTTTSCG--------------
T ss_pred CcCCC----CCCEEEEEcCC-H----------------HHHHHHHHHHHHC-CcEEEeeCCCCCCC--------------
Confidence 76543 23455554432 1 2466788888776 99999887765331
Q ss_pred HHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 482 IRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 482 ~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++.+++++|+++++++|+++++..
T Consensus 361 ------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 361 ------------EESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp ------------GGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ------------CCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 14899999999999999999999999988653
No 69
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=4.8e-27 Score=250.01 Aligned_cols=333 Identities=13% Similarity=0.039 Sum_probs=231.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal 153 (609)
.+++++.+... +.++.+.+++.+.+.... . .|.......++++.+.+++.+.+|. +++ +|++| +|+++++
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~-~y~~~~g~~~lr~~la~~~~~~~g~~~~~~-~v~~~-~g~t~al 114 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKGE----V-KYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVT-NGAKQAL 114 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTCC----C-CCCCTTCCHHHHHHHHHHHHHHHTCCCCGG-GEEEE-SHHHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEe-cCHHHHH
Confidence 46777766554 346788888888775321 1 1111112233444444444444476 444 89998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++.++ +++|| .|+++.+.|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 115 ~~~~~~l---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----- 172 (389)
T 1o4s_A 115 FNAFMAL---------------LDPGD--EVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV----- 172 (389)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-----
T ss_pred HHHHHHh---------------CCCCC--EEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-----
Confidence 9888876 36888 699999999999988999999999999875 45789999999997
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc---ccCCCCC-CCCccEEEEcCCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE---IDVRSGQ-TDGYDAIFLSTHKFLGGPG 304 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~---id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++.+... .++..+. ..+.|+++.|+||++|.|+
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 252 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG 252 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG
T ss_pred cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcc
Confidence 57899999999999999988 889999999999999999998865431 1221111 1367999999999997332
Q ss_pred -CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 305 -SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 305 -g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.+|++++++++ ++.+.+. ......+++.+.+. ++.+.+ + .+.+.+.++
T Consensus 253 ~r~G~l~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~l--~-~~~~~~~~~ 301 (389)
T 1o4s_A 253 WRVGYLISSEKV--ATAVSKI------------------------QSHTTSCINTVAQY--AALKAL--E-VDNSYMVQT 301 (389)
T ss_dssp GCCEEEECCHHH--HHHHHHH------------------------HHHHTCSCCHHHHH--HHHHHT--T-CCCHHHHHH
T ss_pred cceEEEEeCHHH--HHHHHHH------------------------hhhcccCCCHHHHH--HHHHHH--h-ccHHHHHHH
Confidence 38999998887 2222111 00111233333332 222222 2 246778888
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.+++++++.+.|+++ ++++..+ ..+++.+...+ .+..++.+.|.++.||.+++|..|
T Consensus 302 ~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~------------------~~~~~l~~~l~~~~gi~v~~g~~f 358 (389)
T 1o4s_A 302 FKERKNFVVERLKKM-GVKFVEP----EGAFYLFFKVR------------------GDDVKFCERLLEEKKVALVPGSAF 358 (389)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCCC----SBSSEEEEECS------------------SCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHhc-CCeeecC----CcceEEEEeCC------------------CCHHHHHHHHHHHCCEEEeCchhc
Confidence 889999999999877 7766543 33555444332 246788888864579999987655
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.. ++++||+++ +++++++.++++|+++++
T Consensus 359 ~~-----------------------------~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 359 LK-----------------------------PGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp TC-----------------------------TTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred CC-----------------------------CCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 41 379999998 499999999999988764
No 70
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=3.1e-26 Score=241.60 Aligned_cols=351 Identities=12% Similarity=-0.032 Sum_probs=232.2
Q ss_pred CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccch
Q 038499 86 SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVP 165 (609)
Q Consensus 86 ~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (609)
.++.++.+.+++.+.+...+.++ + ....++++.+++++|.+ +++++ +|+++++..++.+++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~-------~----~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~~~~~~~~-- 70 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLTQ-------G----KRSLLFEEALCEFLGVK---HALVF-NSATSALLTLYRNFSEF-- 70 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCSS-------S----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHSSCC--
T ss_pred CCCCCHHHHHHHHHHHHcCcccC-------C----hHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHhccc--
Confidence 35778889999988875432222 1 24678999999999986 68898 56666888888776200
Q ss_pred hhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCc
Q 038499 166 SILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNV 245 (609)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~ 245 (609)
+++|| .|+++.++|+++...++..|++++.+++++++.+|+++|+++++ +++++++++++
T Consensus 71 ----------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~~--- 130 (375)
T 2fnu_A 71 ----------SADRN--EIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLIN-----ERTKAIVSVDY--- 130 (375)
T ss_dssp ----------CTTSC--EEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-----TTEEEEEEECG---
T ss_pred ----------CCCCC--EEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-----cCceEEEEeCC---
Confidence 25788 79999999999999999999999999998877899999999887 57888877766
Q ss_pred cccccCHHHHHHHHHHhCCeEEEeccccCCccccc--CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe--chhhccCCC
Q 038499 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID--VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT--KALYQLGSF 321 (609)
Q Consensus 246 TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id--~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~--~~~~~l~~~ 321 (609)
||.+.|+++|.++|++||+++|+|++++.+..+.. +... ..+++.++|+||++| | |.|+++++ +++ .+.+
T Consensus 131 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~--~~~~ 204 (375)
T 2fnu_A 131 AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGF--ALASVFSFHAIKPIT-T-AEGGAVVTNDSEL--HEKM 204 (375)
T ss_dssp GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSS--SSEEEEECCTTSSSC-C-SSCEEEEESCHHH--HHHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeecccc--CCeEEEeCCCCCCcc-c-cCceEEEeCCHHH--HHHH
Confidence 99999999999999999999999999988765432 2211 124445556669996 6 68988885 444 2223
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
.+...++.. . . ....| .........+...+. +++.+. ...+.+.+.++.+++++++.+.|+++|++
T Consensus 205 ~~~~~~~~~-~--~----~~~~~-~~~~~~~~~~~~~~~----~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (375)
T 2fnu_A 205 KLFRSHGML-K--K----DFFEG-EVKSIGHNFRLNEIQ----SALGLS--QLKKAPFLMQKREEAALTYDRIFKDNPYF 270 (375)
T ss_dssp HHHTBTTEE-E--S----SSSCE-EESSCCCBCCCCHHH----HHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHhcCCc-c--c----ccccc-ccccccccCCCCHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 222222211 0 0 00000 000000111222222 222222 23467888899999999999999999999
Q ss_pred EEeCCCCC-CCcceE-EEEeccCCCCCcCCCCCCCCCCCCC-ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC---
Q 038499 402 KILGNTST-KRQAIL-SFNIHSSTINSSLGENTKTETDKPL-HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD--- 475 (609)
Q Consensus 402 ~v~~~~~~-~r~~~~-~f~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~--- 475 (609)
++..+.+. ...+.+ .+.+.. . .. +...+.+.|.+ .||.++.+| . | ++.+..++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~l~~~L~~-~gi~v~~~~--~-p-~~~~~~~~~~~ 329 (375)
T 2fnu_A 271 TPLHPLLKDKSSNHLYPILMHQ-K---------------FFTCKKLILESLHK-RGILAQVHY--K-P-IYQYQLYQQLF 329 (375)
T ss_dssp EESGGGCSSCCCCSCEEEEECG-G---------------GGGGHHHHHHHHHH-TTEECBCCC--C-C-GGGSHHHHHHH
T ss_pred cccCCCCCCCcceEEEEEEeCc-c---------------ccchHHHHHHHHHH-CCCCccccc--c-c-cccchhhhcCC
Confidence 98765211 122232 333332 1 02 46788888865 599999543 2 2 11100000
Q ss_pred ----hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 476 ----EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 476 ----~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+.+... ..+++||+++.++|++|+++++++|+++++..
T Consensus 330 ~~~~~~~~~~~-----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 330 NTAPLKSAEDF-----------YHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp CCCCCHHHHHH-----------HHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CccCChHHHHH-----------HhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0000000 13789999999999999999999999987653
No 71
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.95 E-value=1.1e-26 Score=246.71 Aligned_cols=343 Identities=14% Similarity=0.066 Sum_probs=231.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCc-EEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDA-MIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~-vift~sGttaa 152 (609)
++++|+.+... +.++.+.+++.+.+.... . .|.......++++.+.+++++.+|. +++ + |++| +|++++
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---~--~y~~~~g~~~l~~~la~~~~~~~g~~~~~~-~~v~~~-~g~~~a 99 (389)
T 1gd9_A 27 DVISLGIGEPDFDTPQHIKEYAKEALDKGL---T--HYGPNIGLLELREAIAEKLKKQNGIEADPK-TEIMVL-LGANQA 99 (389)
T ss_dssp SCEECCCCSCSSCCCHHHHHHHHHHHHTTC---C--SCCCTTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEE-SSTTHH
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhCCC---C--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCC-CeEEEc-CChHHH
Confidence 46777766554 356788888887775311 0 1111112234444444444444484 455 7 9998 677778
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhcc
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~ 230 (609)
+..++..+ +++|| .|++..+.|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 100 ~~~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---- 158 (389)
T 1gd9_A 100 FLMGLSAF---------------LKDGE--EVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT---- 158 (389)
T ss_dssp HHHHHTTT---------------CCTTC--EEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC----
T ss_pred HHHHHHHh---------------CCCCC--EEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC----
Confidence 88887765 36788 699999999999988999999999999875 45789999999997
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCC-CCCccEEEEcCCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQ-TDGYDAIFLSTHKFLGG 302 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~-~~~~D~v~~S~hK~lgg 302 (609)
++++++++++++||||.+.+ +++|+++|++||+++|+|++++.+.. ..++..+. ..+.|+++.|+||++|.
T Consensus 159 -~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 237 (389)
T 1gd9_A 159 -DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAM 237 (389)
T ss_dssp -TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTC
T ss_pred -cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCC
Confidence 57899999999999999985 88999999999999999999886543 12232221 12568999999999974
Q ss_pred CC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHH
Q 038499 303 PG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVI 380 (609)
Q Consensus 303 p~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i 380 (609)
|+ .+|++++++++ ++.+.+...+ ...+.+...+.+ .+++... .+..+.+.+
T Consensus 238 ~G~r~G~~~~~~~~--~~~l~~~~~~------------------------~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~ 290 (389)
T 1gd9_A 238 TGWRLGFVAAPSWI--IERMVKFQMY------------------------NATCPVTFIQYAAAKALKDE-RSWKAVEEM 290 (389)
T ss_dssp GGGCCEEEECCHHH--HHHHHHHHTT------------------------TTCSCCHHHHHHHHHHHTCH-HHHHHHHHH
T ss_pred cccceEEEEECHHH--HHHHHHHHhh------------------------hccCCCHHHHHHHHHHHhCC-CcchHHHHH
Confidence 42 37999999877 2222111000 001122222211 2222110 111145677
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC
Q 038499 381 KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG 460 (609)
Q Consensus 381 ~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G 460 (609)
.++.+++++++.+.|+++ ++++..+ ..+++.+...+ .. ..+...+.+.|.+++||.+++|
T Consensus 291 ~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~v~~g 350 (389)
T 1gd9_A 291 RKEYDRRRKLVWKRLNEM-GLPTVKP----KGAFYIFPRIR-DT--------------GLTSKKFSELMLKEARVAVVPG 350 (389)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCCCC----CBTTEECCBCG-GG--------------TCCHHHHHHHHHHHTCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHc-CCeecCC----CeeeEEEEecc-CC--------------CCCHHHHHHHHHHhCCEEEeCc
Confidence 788888899999999877 7776544 23444333222 10 1356788888874579999988
Q ss_pred cccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 461 CACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 461 ~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..|... .++++||+++. ++++++.++++|+++++.
T Consensus 351 ~~~~~~---------------------------~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 351 SAFGKA---------------------------GEGYVRISYAT--AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp GGGCGG---------------------------GTTBEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred hhhCCC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 766511 14799999984 899999999999998765
No 72
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.95 E-value=2.8e-26 Score=247.41 Aligned_cols=346 Identities=10% Similarity=-0.076 Sum_probs=238.4
Q ss_pred CceEEecCCCC-----CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC-----CCCCCcEEEe
Q 038499 76 RRLTYADHTAS-----GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG-----GGQEDAMIFC 145 (609)
Q Consensus 76 ~~~vyld~~a~-----g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g-----~~~~~~vift 145 (609)
+++++|+.+.. .+.++.|.+++.+.+.....+ . |.. .....++++.++++++ .+++ +|++|
T Consensus 54 ~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~--~--y~~----~~g~~~lr~~la~~~~~~~~~~~~~-~v~~t 124 (427)
T 3dyd_A 54 KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN--G--YAP----SIGFLSSREEIASYYHCPEAPLEAK-DVILT 124 (427)
T ss_dssp SCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS--S--CCC----TTCCHHHHHHHHHHHCBTTBCCCGG-GEEEE
T ss_pred CCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC--C--CCC----CCCcHHHHHHHHHHHhhcCCCCChH-HEEEe
Confidence 36788877653 367788999988877532111 0 111 1125678999999998 5565 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRS 223 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~ 223 (609)
+|+++++..++..+ .++|| .|+++.+.|+.+...++..|++++.++.++ ++.+|+++|++
T Consensus 125 -~g~t~al~~~~~~l---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 186 (427)
T 3dyd_A 125 -SGCSQAIDLCLAVL---------------ANPGQ--NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEY 186 (427)
T ss_dssp -SSHHHHHHHHHHHH---------------CCTTC--EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHS
T ss_pred -cCcHHHHHHHHHHh---------------cCCCC--EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHH
Confidence 77888899888876 36888 689999999998888999999999999864 56789999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcC
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLST 296 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~ 296 (609)
+++ ++++++++++++||||.+.| +++|+++|++||+++|+|++++... ....+..+..+...+++.|+
T Consensus 187 ~l~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~ 261 (427)
T 3dyd_A 187 LID-----EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGL 261 (427)
T ss_dssp SCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEES
T ss_pred Hhc-----cCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeec
Confidence 997 57899999999999999999 8999999999999999999987532 22233332111223667799
Q ss_pred CCCCCCCC-CcEEEEEechhhc-----cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 297 HKFLGGPG-SPGILLMTKALYQ-----LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 297 hK~lggp~-g~G~L~~~~~~~~-----l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
||.+|+|+ .+|++++++.... ++.+. ..... ..+++......+...+.
T Consensus 262 sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~------------------------~~~~~--~~~~~~~~~~a~~~~L~ 315 (427)
T 3dyd_A 262 AKRWLVPGWRLGWILIHDRRDIFGNEIRDGLV------------------------KLSQR--ILGPCTIVQGALKSILC 315 (427)
T ss_dssp TTTSSCGGGCCEEEEEECSTTSSHHHHHHHHH------------------------HHHHH--HCCSCHHHHHHHHHHHH
T ss_pred cccCCCcCcceEEEEecCcchhhHHHHHHHHH------------------------HHHhc--cCCCCHHHHHHHHHHHH
Confidence 99987553 4899999853200 11110 00001 12233322221111111
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEE-EeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 371 VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSF-NIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 371 ~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f-~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
.....+.+.+.++.+++++++.+.|+++|+++++.+. .+++.+ .+.. .. -....+..++++.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~----~g~~~~~~l~~-~~-----------~~~~~~~~~~~~~l 379 (427)
T 3dyd_A 316 RTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPS----GAMYLMVGIEM-EH-----------FPEFENDVEFTERL 379 (427)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCS----BTTEEEEEECG-GG-----------CTTCSSHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC----eeEEEEEecCH-hh-----------cCCCCCHHHHHHHH
Confidence 0012345677788888999999999988999887652 344444 3331 10 00113567788887
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+++||.+++|..|.. ++++||+++ ++++++++++++|++++++..
T Consensus 380 ~~~~gV~v~~g~~~~~-----------------------------~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 380 VAEQSVHCLPATCFEY-----------------------------PNFIRVVIT--VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp HHHHCEECEEGGGGTC-----------------------------TTEEEEESC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCEEEECCcccCC-----------------------------CCeEEEEEC--CCHHHHHHHHHHHHHHHHHhh
Confidence 6667999998876651 489999987 799999999999999887643
No 73
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.95 E-value=6.8e-26 Score=244.46 Aligned_cols=356 Identities=13% Similarity=0.007 Sum_probs=233.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcC-C-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhC------CCCCCcEEEeCC
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLP-F-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLG------GGQEDAMIFCGS 147 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~-~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g------~~~~~~vift~s 147 (609)
.++.|+.+... +.++.|.+++.+.+.. . ...+.. .+ ..++|+.++++++ ++++ +|++| +
T Consensus 45 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~g------~~~lr~~la~~~~~~~g~~~~~~-~i~~t-~ 112 (437)
T 3g0t_A 45 KFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL----DG------LPELKQEASRFAKLFVNIDIPAR-ACVPT-V 112 (437)
T ss_dssp CCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT----TC------CHHHHHHHHHHHHHHHCCCCCGG-GEEEE-S
T ss_pred CEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC----CC------hHHHHHHHHHHHHHhhCCCCCcc-cEEEe-C
Confidence 45666555433 3467888888877652 1 111110 11 2355666666665 4455 89998 7
Q ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHh
Q 038499 148 GTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLE 226 (609)
Q Consensus 148 Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~ 226 (609)
|+++++..++..+. .+++||+..|+++.+.|+++...++..|++++.+++++ ++.+|+++|++++.
T Consensus 113 g~t~al~~~~~~l~-------------~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 113 GSMQGCFVSFLVAN-------------RTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp HHHHHHHHHHHHHT-------------TSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh-------------cCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 88889999887761 01678721388888999999989999999999999975 44689999999994
Q ss_pred hhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc--ccC-------CCCC-CCCccEEE
Q 038499 227 LYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE--IDV-------RSGQ-TDGYDAIF 293 (609)
Q Consensus 227 ~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~--id~-------~~~~-~~~~D~v~ 293 (609)
. ++++++++++++||||.+.| +++|+++|++||+++|+|++++..... ..+ .... ..+.++++
T Consensus 180 ~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (437)
T 3g0t_A 180 T----GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILA 255 (437)
T ss_dssp T----TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEE
T ss_pred c----CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEE
Confidence 3 68999999999999999987 667899999999999999998753211 111 1111 13567899
Q ss_pred EcCCCCCCCC-CCcEEEEEechhhccC-CCCCCcc--CCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH
Q 038499 294 LSTHKFLGGP-GSPGILLMTKALYQLG-SFPPSTC--GGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF 369 (609)
Q Consensus 294 ~S~hK~lggp-~g~G~L~~~~~~~~l~-~~~p~~~--ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~ 369 (609)
.|+||++|.| .++|++++++++ ++ ....... +++. ....++... .+....+++......+. ++
T Consensus 256 ~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~a~~-~~ 322 (437)
T 3g0t_A 256 LSSSKAFSYAGQRIGVLMISGKL--YEREYPDLEESFGRLR---------FGEALSSSA-LYALSSGATHSAQWGMA-AM 322 (437)
T ss_dssp EESTTTTSCGGGCCEEEEECHHH--HHCBCGGGHHHHSCSB---------HHHHHHTTH-HHHHHSSSCHHHHHHHH-HH
T ss_pred EcCccCCCCccceeEEEEECHHH--hhhhhhcccccccccc---------hhHHHHHHH-HhhhcCCCCHHHHHHHH-HH
Confidence 9999999833 358999999887 33 2111110 0000 000001110 11112233333322222 22
Q ss_pred HHHHhcC---HHHHHHHHHHHHHHHHHHhCCCCceEEe------CCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 370 WVKEYIG---HEVIKKQEETYIERALERLLPNQNIKIL------GNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 370 ~~~~~~g---~~~i~~~~~~l~~~~~~~L~~~p~i~v~------~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
+.....+ .+.+.++.+++++++.+.|+++ ++++. .+. ....++++.+.. .
T Consensus 323 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~--~~~~~~~~~~~~------------------~ 381 (437)
T 3g0t_A 323 LKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPL--ADGFYFTVGYKG------------------M 381 (437)
T ss_dssp HHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEEC--CSSSEEEEEETT------------------C
T ss_pred HhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCC--ceeEEEEEecCC------------------C
Confidence 1111112 7888899999999999999988 88887 220 122333333332 4
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
+...+.+.|.+ .||.+++|..|..+ .++++|||+++ .+++|+++++++|++
T Consensus 382 ~~~~l~~~L~~-~gi~v~~~~~~~~~---------------------------~~~~iRis~~~-~~~e~i~~~~~~l~~ 432 (437)
T 3g0t_A 382 DSSKLIEKFVR-YGMCAITLKTTGSK---------------------------RNEAMRICTSL-LPESQFPDLEKRLQM 432 (437)
T ss_dssp CHHHHHHHHHH-TTEECEESTTTTCC---------------------------CTTCEEEECSS-SCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHH-cCeEEeeccccCCC---------------------------CCCEEEEEEec-CCHHHHHHHHHHHHH
Confidence 67889999976 49999988776521 13789999994 499999999999999
Q ss_pred HHHh
Q 038499 521 IAIY 524 (609)
Q Consensus 521 v~~~ 524 (609)
++++
T Consensus 433 ~~~~ 436 (437)
T 3g0t_A 433 LNAE 436 (437)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8765
No 74
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=1.4e-26 Score=247.76 Aligned_cols=342 Identities=12% Similarity=-0.030 Sum_probs=232.9
Q ss_pred ceEEecCCCC---C-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHH
Q 038499 77 RLTYADHTAS---G-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTT 150 (609)
Q Consensus 77 ~~vyld~~a~---g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGtt 150 (609)
++++++.+.. . +.++.+.+++.+.+.... . .|.......++.+.+.+++.+..| .+++ +|++| +|++
T Consensus 39 ~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~----~-~y~~~~g~~~l~~~la~~l~~~~g~~~~~~-~v~~t-~g~~ 111 (406)
T 1xi9_A 39 KVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH----N-YYGDSEGLPELRKAIVEREKRKNGVDITPD-DVRVT-AAVT 111 (406)
T ss_dssp CCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC----C-SCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SHHH
T ss_pred CEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCcHHHHHHHHHHHHHhcCCCCCHH-HEEEc-CChH
Confidence 4678877665 2 456788888877775321 0 011111123344444444444444 4454 89998 7888
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhh
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELY 228 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~ 228 (609)
+++..++.++ +++|| .|+++.++|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 112 ~al~~~~~~l---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-- 172 (406)
T 1xi9_A 112 EALQLIFGAL---------------LDPGD--EILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-- 172 (406)
T ss_dssp HHHHHHHHHH---------------CCTTC--EEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC--
T ss_pred HHHHHHHHHh---------------CCCCC--EEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC--
Confidence 8999888876 36888 699999999999988889999999999875 45689999999998
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCc-cEEEEcCCCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGY-DAIFLSTHKFLG 301 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~-D~v~~S~hK~lg 301 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++.+.. ...+..+. .+. |+++.|+||++|
T Consensus 173 ---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~ 248 (406)
T 1xi9_A 173 ---DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYF 248 (406)
T ss_dssp ---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTC
T ss_pred ---cCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccC
Confidence 57899999999999999987 88999999999999999999876432 11121111 245 788999999997
Q ss_pred CCC-CcEEEE--Eec----hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-HHHHHHHHHHH
Q 038499 302 GPG-SPGILL--MTK----ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM-IRAALAFWVKE 373 (609)
Q Consensus 302 gp~-g~G~L~--~~~----~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~-~~aal~~~~~~ 373 (609)
.|+ .+|+++ .++ ++ ++.+... .... .+.+.+.+. +.+++.. .
T Consensus 249 ~~G~r~G~~~~~~~~~~~~~l--~~~l~~~------------------------~~~~-~~~~~~~~~a~~~~l~~---~ 298 (406)
T 1xi9_A 249 ATGWRLGYMYFVDPENKLSEV--REAIDRL------------------------ARIR-LCPNTPAQFAAIAGLTG---P 298 (406)
T ss_dssp CGGGCCEEEEEECTTCTTHHH--HHHHHHH------------------------HHHT-CCSCSHHHHHHHHHHHS---C
T ss_pred CCccEEEEEEEecCchhHHHH--HHHHHHH------------------------HHhh-cCCCHHHHHHHHHHHhC---C
Confidence 332 379999 777 65 2222100 0001 122222221 1222210 1
Q ss_pred hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhc
Q 038499 374 YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLF 453 (609)
Q Consensus 374 ~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~ 453 (609)
..+.+.+.++.+++++++.+.|+++|++++..+ ..+++.|...+ .. ...+...+.+.|.++.
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~-~~-------------~~~~~~~l~~~l~~~~ 360 (406)
T 1xi9_A 299 MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP----QGAFYIFPKIE-VG-------------PWKNDKEFVLDVLHNA 360 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC----CBSSEECCEEC-SC-------------SCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC----CeeEEEEEecC-cc-------------CCCCHHHHHHHHHHhC
Confidence 112567778888899999999998889887654 23555553333 10 0135678888886457
Q ss_pred CcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 454 GIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 454 GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
||.+++|..|... .++++||+++ +++++++.++++|+++++..
T Consensus 361 gi~v~~g~~f~~~---------------------------~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 361 HVLFVHGSGFGEY---------------------------GAGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp CEECEEGGGGCGG---------------------------GTTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEeCchhcCCC---------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 9999988766410 1489999998 89999999999999987653
No 75
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=6.6e-27 Score=249.56 Aligned_cols=346 Identities=16% Similarity=0.143 Sum_probs=234.8
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCc--cCCCCCCchhh-HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFY--GNTHTCDSYVG-QHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~-~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
++|+++.++.++.|.+++.+.+...+ ++++.. +..+ ....++.+++|+++++++|.+++ .+++++| ++++..+
T Consensus 26 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~r~~la~~~g~~~~--~i~~~sG-t~a~~~a 101 (405)
T 2vi8_A 26 IELIASENFVSRAVMEAQGSVLTNKYAEGYPGRR-YYGGCEYVDIVEELARERAKQLFGAEHA--NVQPHSG-AQANMAV 101 (405)
T ss_dssp EECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEE-SSSCCHHHHHHHHHHHHHHHHHHTCSEE--ECCCSSH-HHHHHHH
T ss_pred eeeccCcccCCHHHHHHHHHHhhcccccCCCCcc-ccccchHHHHHHHHHHHHHHHHhCCCce--EEEecCc-HHHHHHH
Confidence 56666677789999999988775322 333321 1122 23455666788999999998743 4544588 6678877
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HHcC--ceEEEEecC-CCCCCCHHHHHHHHhhhcc
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQSL--AEVVEIGLD-DDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~G--~~vv~v~~~-~~g~ld~e~L~~al~~~~~ 230 (609)
+.++ +++|| .|+++.++|+++...+ ...| .+++.++++ .++.+|+++|++++++
T Consensus 102 ~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--- 161 (405)
T 2vi8_A 102 YFTV---------------LEHGD--TVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARL--- 161 (405)
T ss_dssp HHHH---------------CCTTC--EEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH---
T ss_pred HHHh---------------cCCCC--EEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHh---
Confidence 7765 36888 6888888998875321 2334 478888876 4678999999999984
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.++++++++ ++| .|...|+++|.++|++||+++|+|++++.+....+.........|++++|+||+++||.| |+++
T Consensus 162 -~~~~~v~~~-~~~-~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~ 237 (405)
T 2vi8_A 162 -HRPKLIVAA-AAA-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMIL 237 (405)
T ss_dssp -HCCSEEEEC-CSS-CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEE
T ss_pred -cCCeEEEEe-CCC-CCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEE
Confidence 267887774 333 467779999999999999999999998865433333222112579999999999998888 9999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR--AALAFWVKEYIGHEVIKKQEETYI 388 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~--aal~~~~~~~~g~~~i~~~~~~l~ 388 (609)
+++++. +.+.+.. .....++++..+... +++... +..+.+.+.++.++++
T Consensus 238 ~~~~~~--~~l~~~~------------------------~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~ 289 (405)
T 2vi8_A 238 CQEQFA--KQIDKAI------------------------FPGIQGGPLMHVIAAKAVAFGEA--LQDDFKAYAKRVVDNA 289 (405)
T ss_dssp ECHHHH--HHHHHHH------------------------TTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHH
T ss_pred EcHHHH--HHHHhhh------------------------cccccCCCCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHH
Confidence 998772 2221110 011234555544333 333332 2346788889999999
Q ss_pred HHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 389 ERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 389 ~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+++.+.|+++ +++++.+. ....++++.+.. .. .+...+.+.|.+ .||.+++|..|....+
T Consensus 290 ~~l~~~L~~~-g~~~~~~~--~~~~~~~~~~~~-~~---------------~~~~~~~~~l~~-~gi~v~~g~~~~~~~~ 349 (405)
T 2vi8_A 290 KRLASALQNE-GFTLVSGG--TDNHLLLVDLRP-QQ---------------LTGKTAEKVLDE-VGITVNKNTIPYDPES 349 (405)
T ss_dssp HHHHHHHHHT-TCEEGGGS--CSSSEEEEECGG-GT---------------CCHHHHHHHHHH-HTEECEEECCTTCSSC
T ss_pred HHHHHHHHhC-CCeEecCC--CCceEEEEEccC-CC---------------CCHHHHHHHHHH-cCceeccCcCccccCC
Confidence 9999999888 88887652 133445554432 11 356788888855 6999998764310000
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY----YMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~----~~t~eeid~ll~al~~v~~~ 524 (609)
. ..++++|++++. .++++|+++++++|+++++.
T Consensus 350 ~-----------------------~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 350 P-----------------------FVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp T-----------------------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred C-----------------------CCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 0 014789999986 46799999999999998754
No 76
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.95 E-value=8.7e-27 Score=248.49 Aligned_cols=342 Identities=13% Similarity=0.046 Sum_probs=234.1
Q ss_pred ceEEecCCCCC---CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG---RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g---~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal 153 (609)
.+++++.+... ..++.+.+++.+.+......... |.. .....++++.+++++|.+++ +|++| +|+++++
T Consensus 33 ~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--y~~----~~~~~~l~~~la~~~g~~~~-~v~~~-~g~~~al 104 (397)
T 2zyj_A 33 GILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQ--YSP----TEGYAPLRAFVAEWIGVRPE-EVLIT-TGSQQAL 104 (397)
T ss_dssp TCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTS--CCC----TTCCHHHHHHHHHHHTSCGG-GEEEE-SHHHHHH
T ss_pred CceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhC--CCC----CCCCHHHHHHHHHHhCCChh-hEEEe-ccHHHHH
Confidence 46677655432 25677888887766431000000 100 11246789999999997766 89998 8888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
..++.++ +++|| .|++..+.|+++...++..|++++.++.++++ +|+++|++++++ .+
T Consensus 105 ~~~~~~~---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~----~~ 162 (397)
T 2zyj_A 105 DLVGKVF---------------LDEGS--PVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKR----ER 162 (397)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHH----CC
T ss_pred HHHHHHh---------------CCCCC--EEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhh----cC
Confidence 9888876 36888 68999999999998899899999999987765 899999999984 36
Q ss_pred ceEE-EEecccCccccccCHH---HHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCC---CccEEEEcCCCCCCC
Q 038499 234 PILG-SFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTD---GYDAIFLSTHKFLGG 302 (609)
Q Consensus 234 ~~lv-~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~---~~D~v~~S~hK~lgg 302 (609)
++++ ++++++||||.+.|.+ +|+++|++||+++|+|++++.... ..++..+..+ +.++++.|+||++|
T Consensus 163 ~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~- 241 (397)
T 2zyj_A 163 PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS- 241 (397)
T ss_dssp CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-
T ss_pred CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-
Confidence 8876 5799999999998865 899999999999999999886432 1222222111 23488899999999
Q ss_pred C-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHh--cCHHH
Q 038499 303 P-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEY--IGHEV 379 (609)
Q Consensus 303 p-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~--~g~~~ 379 (609)
| .++|++++++++ ++.+... ......+++.+.+. ++.+++ ... ...+.
T Consensus 242 ~G~r~G~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~l-~~~~~~~~~~ 292 (397)
T 2zyj_A 242 PGLRVAFAVAHPEA--LQKLVQA------------------------KQGADLHTPMLNQM--LVHELL-KEGFSERLER 292 (397)
T ss_dssp GGGCCEEEECCHHH--HHHHHHH------------------------HHHHHSSCCHHHHH--HHHHHH-TTTHHHHHHH
T ss_pred ccceeEEEecCHHH--HHHHHHH------------------------HHhhcCCCCHHHHH--HHHHHH-HhCCHHHHHH
Confidence 5 358999999877 2222111 01112334333332 122222 111 12456
Q ss_pred HHHHHHHHHHHHHHHhCC-CC-ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 380 IKKQEETYIERALERLLP-NQ-NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~-~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
+.++.+++++++.+.|++ +| ++++..+. .+++.+...+ .. .+...+.+.|.++ ||.+
T Consensus 293 ~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~----~g~~~~~~~~-~~---------------~~~~~~~~~l~~~-gi~v 351 (397)
T 2zyj_A 293 VRRVYREKAQAMLHALDREVPKEVRYTRPK----GGMFVWMELP-KG---------------LSAEGLFRRALEE-NVAF 351 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTSEECCCS----BSSEEEEECS-TT---------------CCHHHHHHHHHHT-TEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEccCC----ccEEEEEEcC-CC---------------CCHHHHHHHHHHC-CCEE
Confidence 677777888888888876 57 68876542 2344443333 11 3577888888775 9999
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++|..|.... ..++++||+++.. +++|++.++++|+++++..
T Consensus 352 ~~g~~f~~~~-------------------------~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 352 VPGGPFFANG-------------------------GGENTLRLSYATL-DREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp EESGGGCTTS-------------------------CCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred echHHhcCCC-------------------------CCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHH
Confidence 9887665210 0258999999875 8999999999999988654
No 77
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=4.9e-26 Score=248.92 Aligned_cols=361 Identities=16% Similarity=0.083 Sum_probs=238.0
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
..+|++ ++.+...+.+.+++.+.+.. | ++... ...+.+..+++.++++++++++|.+. .++++++|+. ++...
T Consensus 67 ~~~~lg-~~~~~~~p~v~~~~~~~~~~-~-~~~~~-~~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~-a~~~a 139 (474)
T 1wyu_B 67 TFYPLG-SCTMKYNPKLHEEAARLFAD-L-HPYQD-PRTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAH-GELTG 139 (474)
T ss_dssp SCCCBT-TTCCCCCCHHHHHHHHTTSS-C-CTTSC-GGGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHH-HHHHH
T ss_pred Cccccc-cccccCCHHHHHHHHHHHHh-c-CCCCc-hhhChHHHHHHHHHHHHHHHHHCCCc--eeecChHHHH-HHHHH
Confidence 356777 44455555666666665321 1 23221 11356778999999999999999874 4667755554 45443
Q ss_pred HHHhcccchhhHHHHHHhhhcCCC---ceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEE---RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd---~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
+.++. .. ..++|| +..|+++...|+++...++..|++++.|+.++++.+|+++|+++++ ++
T Consensus 140 l~~~~--------~~---~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-----~~ 203 (474)
T 1wyu_B 140 ILIIR--------AY---HEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-----PH 203 (474)
T ss_dssp HHHHH--------HH---HHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-----TT
T ss_pred HHHHH--------HH---HHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-----CC
Confidence 22210 00 013554 3469999999999999999999999999998889999999999998 57
Q ss_pred ceEEEEecccCccccc-cCHHHHHHHHHHhCCeEEEeccccCCcc-cccCCCCCCCCccEEEEcCCCCCCCCC-----Cc
Q 038499 234 PILGSFSACSNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYV-EIDVRSGQTDGYDAIFLSTHKFLGGPG-----SP 306 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~-~dl~~I~~la~~~g~~vivD~A~~~~~~-~id~~~~~~~~~D~v~~S~hK~lggp~-----g~ 306 (609)
+++++++++ |+||.+ .|+++|+++||+||+++|+|++++.+.. ..+... .++|++++|+||++++|. ++
T Consensus 204 t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~---~g~di~~~s~~K~~~~p~g~gG~~~ 279 (474)
T 1wyu_B 204 VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGD---MGFDVVHLNLHKTFTVPHGGGGPGS 279 (474)
T ss_dssp EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHH---HTCSEEECCTTTTTCCCCTTSCCCC
T ss_pred ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCccc---CCCcEEEEeCccccccCCCCCCCCe
Confidence 999999987 689998 6999999999999999999999875543 122111 268999999999999884 58
Q ss_pred EEEEEechhhccCCCC-CCcc-CCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH-HHhcCHHHHHHH
Q 038499 307 GILLMTKALYQLGSFP-PSTC-GGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV-KEYIGHEVIKKQ 383 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~-p~~~-ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~-~~~~g~~~i~~~ 383 (609)
|++++++++ ++.+. +... +|.. |...+.. .....+...++.+.... .++++++. ....+++.+.++
T Consensus 280 G~~~~~~~l--~~~l~~~~~~~~g~~--~~~~~~~------~~~~~~~~~~~~~~~~~-~aa~~~l~~~g~~~l~~~~~~ 348 (474)
T 1wyu_B 280 GPVGVKAHL--APYLPVPLVERGEEG--FYLDFDR------PKSIGRVRSFYGNFLAL-VRAWAYIRTLGLEGLKKAAAL 348 (474)
T ss_dssp CCEEECGGG--GGGCCSCEEEECSSC--EEEECCC------TTCCCCSSSTTSCHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcHHH--HHhCCCCeeeccCCe--eEecccC------cccCcccccCcCcHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 44554 2211 1111 1100000 00012333444454433 33333331 123356666888
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
..++++++.+.|+++ ++++..+. .....+.+.+.. + .+..++.+.|.++ ||.+. +..+
T Consensus 349 ~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~~~~-~----------------~~~~~l~~~L~~~-Gi~~~-~~~~ 406 (474)
T 1wyu_B 349 AVLNARYLKELLKEK-GYRVPYDG--PSMHEFVAQPPE-G----------------FRALDLAKGLLEL-GFHPP-TVYF 406 (474)
T ss_dssp HHHHHHHHHHHHHHT-TCBCSSCS--SCCSCEEEBCST-T----------------CCHHHHHHHHHHT-TCCCC-EESC
T ss_pred HHHHHHHHHHHHhhc-CcEecCCC--CcceEEEEEcCC-C----------------CCHHHHHHHHHHC-Ccccc-cccc
Confidence 889999999999887 77764321 111112222211 1 3578899999765 99753 2211
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
. . . .++++||+++.++|++|+++++++|+++++.
T Consensus 407 ~----~---~--------------------~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 407 P----L---I--------------------VKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp S----T---T--------------------STTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred c----c---c--------------------cCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 1 0 0 1478999999999999999999999998765
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=2.1e-26 Score=242.28 Aligned_cols=321 Identities=12% Similarity=0.003 Sum_probs=227.0
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcC----CccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLP----FYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTT 150 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~----~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtt 150 (609)
+.+++|+.+... +.++.|.+++.+.+.. .+.++.. ...++++.+++++|++++ +|++| +|++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-----------~~~~lr~~la~~~g~~~~-~i~~t-~g~~ 92 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-----------SSQKLREVAGELYGFDPS-WIIMA-NGSD 92 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-----------SCHHHHHHHHHHHTCCGG-GEEEE-SSHH
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-----------chHHHHHHHHHHhCcCcc-eEEEc-CCHH
Confidence 367888876554 4567899999887764 2222221 135789999999998776 89998 7788
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+++..++..+ +++|| .|++..+.|+++...++..|++++.++.++++.+ ++++++
T Consensus 93 ~al~~~~~~l---------------~~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~------ 147 (360)
T 3hdo_A 93 EVLNNLIRAF---------------AAEGE--EIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER------ 147 (360)
T ss_dssp HHHHHHHHHH---------------CCTTC--EEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS------
T ss_pred HHHHHHHHHH---------------hCCCC--EEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh------
Confidence 8899888876 37888 6999999999999899999999999999876655 433222
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC--cccccCCCCCCCCccEEEEcCCCCCCCC-CCcE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP--YVEIDVRSGQTDGYDAIFLSTHKFLGGP-GSPG 307 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~--~~~id~~~~~~~~~D~v~~S~hK~lggp-~g~G 307 (609)
.+++++++++++||||.+.|+++|.++|+++|+++|+|++++.. .....+. ...+.++++.|+||++|.| .++|
T Consensus 148 -~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~G~r~G 224 (360)
T 3hdo_A 148 -YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELV--RRHENVVVTRTLSKSYSLAGMRIG 224 (360)
T ss_dssp -BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHH--HHCSSEEEEEESTTTTSCTTSCCE
T ss_pred -cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHh--ccCCCEEEEecchHhhcCCcccee
Confidence 24679999999999999999999999999999999999998742 1111110 1124568888999999744 3589
Q ss_pred EEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 308 ILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 308 ~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
++++++++. +.+... ....+++......+. +. +.+....+.+.++.+++
T Consensus 225 ~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~~~a~~-~~-l~~~~~~~~~~~~~~~~ 273 (360)
T 3hdo_A 225 LAIARPEVI--AALDKI---------------------------RDHYNLDRLAQAACV-AA-LRDQAYLSECCRRIRET 273 (360)
T ss_dssp EEECCHHHH--HHHHHH---------------------------SCSCCSCHHHHHHHH-HH-HHCHHHHHHHHHHHHHH
T ss_pred eEeeCHHHH--HHHHHh---------------------------CCCCCCCHHHHHHHH-HH-hcCHHHHHHHHHHHHHH
Confidence 999988772 222110 001122322222211 11 11223457778888889
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++++.+.|+++ ++.+..+ ...++++.+.. .+...+.+.|.+ .||.++++....
T Consensus 274 ~~~l~~~L~~~-~~~~~~~----~~~~~~~~~~~------------------~~~~~l~~~l~~-~gi~v~~~~~~~--- 326 (360)
T 3hdo_A 274 REWFTTELRSI-GYDVIPS----QGNYLFATPPD------------------RDGKRVYDGLYA-RKVLVRHFSDPL--- 326 (360)
T ss_dssp HHHHHHHHHHT-TCEECCC----SSSEEEEECTT------------------CCHHHHHHHHHH-TTEECBCCCSTT---
T ss_pred HHHHHHHHHHC-CCEEcCC----CccEEEEECCC------------------CCHHHHHHHHHH-CCEEEEECCCCC---
Confidence 99999999887 7887643 33455544332 357888888865 699999654310
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|||++ +++|+++++++|+++.+.
T Consensus 327 --------------------------~~~~iRis~~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 327 --------------------------LAHGMRISIG---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp --------------------------TTTSEEEECC---CHHHHHHHHHHHHHHHC-
T ss_pred --------------------------CCCEEEEEcC---CHHHHHHHHHHHHHHhcc
Confidence 2589999997 999999999999998764
No 79
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.95 E-value=3.9e-26 Score=244.05 Aligned_cols=336 Identities=15% Similarity=0.094 Sum_probs=225.1
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChHHHHHHHHHHHhcc
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGTTAAIKRLQEVMGI 162 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGttaal~~l~~~l~~ 162 (609)
.++.+.+++.+.+..... ... |... ....++++.+++++ | .+++ +|++| +|+++++..++.++
T Consensus 50 ~~~~v~~a~~~~~~~~~~--~~~-y~~~----~~~~~l~~~la~~~~~~~g~~~~~~-~v~~t-~g~t~a~~~~~~~~-- 118 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPK--SVM-YTPA----NGIPELREELAAFLKKYDHLEVSPE-NIVIT-IGGTGALDLLGRVL-- 118 (407)
T ss_dssp CHHHHHHHHHHHHHHCGG--GGS-CCCT----TCCHHHHHHHHHHHHHHSCCCCCGG-GEEEE-SHHHHHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHhhccc--ccc-CCCC----CCCHHHHHHHHHHHHHhcCCCCCcc-eEEEe-cCHHHHHHHHHHHh--
Confidence 567788888777653210 000 1111 11345566666666 8 4454 89998 78888999988876
Q ss_pred cchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccC-CCceEE-EEe
Q 038499 163 AVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDA-KRPILG-SFS 240 (609)
Q Consensus 163 ~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~-~~~~lv-~~s 240 (609)
+++|| .|++..+.|+++...++..|++++.++.++++ +|+++|+++++..... ++++++ +++
T Consensus 119 -------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~ 182 (407)
T 2zc0_A 119 -------------IDPGD--VVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIP 182 (407)
T ss_dssp -------------CCTTC--EEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred -------------cCCCC--EEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECC
Confidence 36788 68999999999988888899999999987765 8999999999721101 367876 578
Q ss_pred cccCccccccCHH---HHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEe
Q 038499 241 ACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMT 312 (609)
Q Consensus 241 ~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~ 312 (609)
+++||||.+.|.+ +|+++|++||+++|+|++++.... ..++..+...+.++++.|+||++| |+ .+|+++++
T Consensus 183 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~ 261 (407)
T 2zc0_A 183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAE 261 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECC
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecC
Confidence 9999999999986 899999999999999999876432 122222211244678889999999 54 58999998
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHh-cCHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEY-IGHEVIKKQEETYIER 390 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~-~g~~~i~~~~~~l~~~ 390 (609)
+++. +.+.... .....+++.+.+.+ .+++... ... .+.+.+.++.++++++
T Consensus 262 ~~~~--~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 314 (407)
T 2zc0_A 262 GEIL--KKVLMQK------------------------QPIDFCAPAISQYIALEYLKRG-YFEKYHLEGALLGYKEKRDI 314 (407)
T ss_dssp HHHH--HHHHHHH------------------------TTTTSSSCHHHHHHHHHHHHTT-HHHHHTTTTHHHHHHHHHHH
T ss_pred HHHH--HHHHHHH------------------------HhhcCCCCHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHH
Confidence 8772 2221110 00111222222221 1122110 001 3455677778888888
Q ss_pred HHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 391 ALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 391 ~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
+.+.|++ +|++++..+ ..+++.+...+ .. .+...+.+.|.+++||.+++|..|..+. .
T Consensus 315 l~~~L~~~~~~~~~~~~----~~~~~~~~~~~-~~---------------~~~~~l~~~l~~~~gi~v~~g~~~~~~~-~ 373 (407)
T 2zc0_A 315 MLKALENHLPNAEFTKP----IAGMFVMFFLP-EG---------------ADGISFANELMEREGVVVVPGKPFYTDE-S 373 (407)
T ss_dssp HHHHHHHHCTTSCBCCC----SBSSEEEEECS-TT---------------CCHHHHHHHHHHHTCEECBCSGGGCSSS-C
T ss_pred HHHHHHHhCCCCEEecC----CCcEEEEEEcC-CC---------------CCHHHHHHHHHHhCCeEEECchhccCCC-C
Confidence 9888876 577766544 23434333333 11 3577889988776799999988775220 0
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||+++.. +++|+++++++|+++++..
T Consensus 374 ------------------------~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 374 ------------------------GKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp ------------------------CTTEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 148999999877 8999999999999987653
No 80
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=7.1e-27 Score=247.03 Aligned_cols=321 Identities=15% Similarity=0.108 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.+++++|.+ +++++++|+. ++..++..++ +++|| .|+++.++|+++...++.
T Consensus 36 ~~~~~l~~~la~~~~~~---~~i~~~sgt~-al~~~l~~l~--------------~~~gd--~Vi~~~~~~~~~~~~~~~ 95 (373)
T 3frk_A 36 DEDKKFEQEFADYCNVN---YCIGCGNGLD-ALHLILKGYD--------------IGFGD--EVIVPSNTFIATALAVSY 95 (373)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESCHHH-HHHHHHHHTT--------------CCTTC--EEEEETTSCTHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCC---eEEEeCCHHH-HHHHHHHHcC--------------CCCcC--EEEECCCCcHHHHHHHHH
Confidence 45788999999999985 6788866655 7888777764 47888 799999999999999999
Q ss_pred cCceEEEEecC-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccc
Q 038499 201 SLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEI 279 (609)
Q Consensus 201 ~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~i 279 (609)
.|++++.++.+ +++.+|+++|+++++ +++++++ ++|+||.+.|+++|.++|++||+++|+|++++.+.. +
T Consensus 96 ~g~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~ 166 (373)
T 3frk_A 96 TGAKPIFVEPDIRTYNIDPSLIESAIT-----EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSL-Y 166 (373)
T ss_dssp HSCEEEEECEETTTTEECGGGTGGGCC-----TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCE-E
T ss_pred cCCEEEEEeccccccCcCHHHHHHhcC-----CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCE-E
Confidence 99999999988 467899999999987 5788776 678999999999999999999999999999998765 4
Q ss_pred cCCCCCCCCccEEEEc--CCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 280 DVRSGQTDGYDAIFLS--THKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S--~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
+...... ..|++++| .||++++++..|+++.+++.. .+.+.+...+|... .|. ....|.+
T Consensus 167 ~~~~~~~-~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~-~~~~~~~~~~g~~~-----------~~~-----~~~~g~~ 228 (373)
T 3frk_A 167 KGMKVGS-LGDAAGFSFYPAKNLGSLGDGGAVVTNDKDL-AEKIKALSNYGSEK-----------KYH-----HIYKGFN 228 (373)
T ss_dssp TTEETTS-SSSEEEEECCTTSSSCCSSSCEEEEESCHHH-HHHHHHHHBTTCSB-----------TTB-----CCSCCCB
T ss_pred CCEeccc-cccEEEEeCcCCCccCccceeEEEEeCCHHH-HHHHHHHHhcCccc-----------CCc-----ccccccc
Confidence 4444311 25888888 569998645468888875431 22222322222210 000 0111211
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
..+..+.+++.+. ...+.+.+.++.+++.+++.+.|++++ +.+..........++.|.+..
T Consensus 229 ~~~~~~~aa~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---------------- 289 (373)
T 3frk_A 229 SRLDELQAGFLRV--KLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---------------- 289 (373)
T ss_dssp CCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE----------------
T ss_pred CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe----------------
Confidence 1011122232322 234677888899999999999999987 766433211222333344433
Q ss_pred CCCChHHHHHHHhhhcCcEeccCc----ccCChhhhhhcCC---ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGC----ACAGPYGHHLLDL---DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~----~ca~p~~~~ll~i---~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
.+...+.+.|.+ .||.++.+. .|.+.+.. ++. ..+.+..+ ..+.+|+++++++|++|
T Consensus 290 --~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~lrl~~~~~~t~~d 353 (373)
T 3frk_A 290 --EKRDELQKYLNN-NGIGTLIHYPIPIHLQQAYKD--LGFKTGNFPIAEKI-----------ANEILSIPIWYGMKNEE 353 (373)
T ss_dssp --SSHHHHHHHHHH-TTBCCBCSCSSCGGGSGGGGG--GCCCTTSSHHHHHH-----------HHHEEEECCCTTCCHHH
T ss_pred --CCHHHHHHHHHH-CCCCcccCcCCccccChHHHh--cCCCCCCCHHHHHH-----------HhCEEEccCCCCCCHHH
Confidence 146789999966 499999654 34322211 111 11222211 13789999999999999
Q ss_pred HHHHHHHHHHHHH
Q 038499 511 FEFTLEALEFIAI 523 (609)
Q Consensus 511 id~ll~al~~v~~ 523 (609)
+++++++|+++..
T Consensus 354 i~~~~~~l~~~~~ 366 (373)
T 3frk_A 354 IEYVIDKINAWKL 366 (373)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 81
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.95 E-value=1.4e-25 Score=240.29 Aligned_cols=347 Identities=13% Similarity=0.033 Sum_probs=236.3
Q ss_pred CCccccCCCCCCceEEecCCC-C-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcE
Q 038499 65 KNAEFDSPFGKRRLTYADHTA-S-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAM 142 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a-~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~v 142 (609)
.+..+..+.|+ .++++..+. . -+.++.|.+++.+.+..+ +.... .+....+......++++++++++|.+. .+
T Consensus 49 ~~~~~~~~~g~-~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~~--~i 123 (409)
T 3kki_A 49 KHLVLGKQASP-DDIILQSNDYLALANHPLIKARLAKSLLEE-QQSLF-MSASFLQNDYDKPMIEKRLAKFTGFDE--CL 123 (409)
T ss_dssp SCTTCCCCCCT-TSEECCCSCTTCCTTCHHHHHHHHHHHHSC-CCCCC-SBGGGGCSTTTSCHHHHHHHHHHTCSE--EE
T ss_pred CeeeeCCCCCC-ceEEeeccCccCCcCCHHHHHHHHHHHHHc-CCCCC-ccccccCCcHHHHHHHHHHHHHhCCCe--EE
Confidence 33455556664 344443221 1 124678999998888653 22111 122222334556789999999999863 45
Q ss_pred EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHH
Q 038499 143 IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALR 222 (609)
Q Consensus 143 ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~ 222 (609)
++ ++|+ +++..++.++ +++|| .|+++.+.|+++...++..|++++.++. .|+++|+
T Consensus 124 ~~-~sGt-~a~~~~l~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le 179 (409)
T 3kki_A 124 LS-QSGW-NANVGLLQTI---------------CQPNT--NVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLR 179 (409)
T ss_dssp EE-SCHH-HHHHHHHHHH---------------CCTTC--EEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHH
T ss_pred Ee-cchH-HHHHHHHHHh---------------cCCCC--EEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHH
Confidence 55 4887 4566565555 37888 7999999999999999999999998875 5899999
Q ss_pred HHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCC----CC-CCCccEEEEcCC
Q 038499 223 SKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRS----GQ-TDGYDAIFLSTH 297 (609)
Q Consensus 223 ~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~----~~-~~~~D~v~~S~h 297 (609)
+++++ .+++++++++++||||.+.|+++|.++|++||+++|+|++++.+.....-.. .. ..++|+++.|+|
T Consensus 180 ~~l~~----~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~s 255 (409)
T 3kki_A 180 MLIQR----HGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLA 255 (409)
T ss_dssp HHHHH----HCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESS
T ss_pred HHHHh----cCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecc
Confidence 99985 3579999999999999999999999999999999999999976543111000 00 125789999999
Q ss_pred CCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC-CChhHHHHHHHHHHHHHHHhcC
Q 038499 298 KFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG-GTPQVIQMIRAALAFWVKEYIG 376 (609)
Q Consensus 298 K~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~-gtp~i~~~~~aal~~~~~~~~g 376 (609)
|+++++ | |+++.++++ ++.+..... ...+.. ..+.....+.+++... +..
T Consensus 256 K~~~~~-g-g~v~~~~~~--~~~~~~~~~----------------------~~~~~~~~~~~~~aa~~aal~~~--~~~- 306 (409)
T 3kki_A 256 KTFAYR-A-GAIWCNNEV--NRCVPFISY----------------------PAIFSSTLLPYEAAGLETTLEII--ESA- 306 (409)
T ss_dssp STTCSS-C-EEEEESSSG--GGTHHHHCH----------------------HHHHSBCCCHHHHHHHHHHHHHH--HHC-
T ss_pred hhhCCC-c-eEEEECHHH--HHHHHHhCc----------------------CccccCCCcHHHHHHHHHHHHHH--hcC-
Confidence 999866 3 999999887 333211000 000111 1222222233444433 222
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE
Q 038499 377 HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ 456 (609)
Q Consensus 377 ~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~ 456 (609)
+.++++.+++++++.+.|+++ ++++.+ ..+++++.+.. . .....+.+.|.++ ||.
T Consensus 307 -~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----~~~~~~~~~~~-~----------------~~~~~~~~~L~~~-Gv~ 361 (409)
T 3kki_A 307 -DNRRQHLDRMARKLRIGLSQL-GLTIRS-----ESQIIGLETGD-E----------------RNTEKVRDYLESN-GVF 361 (409)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTT-TCCCCC-----SSSEEEEEEES-H----------------HHHHHHHHHHHHT-TEE
T ss_pred -HHHHHHHHHHHHHHHHHHHHc-CCccCC-----CCCEEEEEeCC-H----------------HHHHHHHHHHHHC-Cce
Confidence 567788889999999999887 666542 34566665543 1 1355788888775 999
Q ss_pred eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 457 ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 457 v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++++.+..+. .++++||+++.++|++|+++++++|+++++.
T Consensus 362 v~~~~~~~~~~--------------------------~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 362 GSVFCRPATSK--------------------------NKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp CEEECTTSSCT--------------------------TCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeeeCCCCcCC--------------------------CCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 98755433221 2589999999999999999999999999875
No 82
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.95 E-value=1.2e-26 Score=245.95 Aligned_cols=333 Identities=14% Similarity=0.045 Sum_probs=230.4
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
++.++.+... +.++.+.+++.+.+.. .+. |... ....++++.++++++++++ +|++| +|+++++..+
T Consensus 27 ~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~----y~~~----~~~~~l~~~la~~~~~~~~-~v~~~-~g~~~a~~~~ 94 (381)
T 1v2d_A 27 AVNLGQGFPSNPPPPFLLEAVRRALGR--QDQ----YAPP----AGLPALREALAEEFAVEPE-SVVVT-SGATEALYVL 94 (381)
T ss_dssp CEECCCCSCSSCCCHHHHHHHHHHTTT--SCS----CCCT----TCCHHHHHHHHHHHTSCGG-GEEEE-SSHHHHHHHH
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHH--hcC----CCCC----CCCHHHHHHHHHhcCCChh-hEEEc-CChHHHHHHH
Confidence 3444443322 3567888998887754 111 1111 1246789999999999876 79998 6777788888
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC---CCCCCCHHHHHHHHhhhccCCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD---DDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~---~~g~ld~e~L~~al~~~~~~~~ 233 (609)
+..+ +++|| .|+++.+.|+++...++..|++++.++.+ +++.+|+++|+++++ ++
T Consensus 95 ~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-----~~ 152 (381)
T 1v2d_A 95 LQSL---------------VGPGD--EVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-----PR 152 (381)
T ss_dssp HHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-----TT
T ss_pred HHHh---------------CCCCC--EEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-----cC
Confidence 8776 36788 69999999999998888899999999987 457799999999987 57
Q ss_pred ceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCCC-Cc
Q 038499 234 PILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPG-SP 306 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~-g~ 306 (609)
++++++++++||||.+.| +++|+++|++||+++|+|++++.... ..++..+ ..+.|+++.|+||++|.|+ .+
T Consensus 153 ~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~ 231 (381)
T 1v2d_A 153 TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRV 231 (381)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCC
T ss_pred CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccce
Confidence 999999999999999987 78899999999999999999875421 2222211 1367999999999997442 38
Q ss_pred EEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHH
Q 038499 307 GILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQE 384 (609)
Q Consensus 307 G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~ 384 (609)
|++++++++ ++.+... ......+++.... +.+++... ....+.+.+.++.
T Consensus 232 G~~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~ 283 (381)
T 1v2d_A 232 GWIVGPKEF--MPRLAGM-------------------------RQWTSFSAPTPLQAGVAEALKLA-RREGFYEALREGY 283 (381)
T ss_dssp EEEECCTTT--HHHHHHH-------------------------HHHHTSSCCHHHHHHHHHHHHHH-HHTTHHHHHHHHH
T ss_pred EEEEeCHHH--HHHHHHH-------------------------HhhcccCCCcHHHHHHHHHHhCc-ccHHHHHHHHHHH
Confidence 999998877 2222110 0011122222222 12222211 0134567788889
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
+++++++.+.|++. ++++..+ ..+++.+...+ . . + +.+.| +++||.+++|..|.
T Consensus 284 ~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~----------------~--~-~~~~l-~~~gi~v~~g~~~~ 337 (381)
T 1v2d_A 284 RRRRDLLAGGLRAM-GLRVYVP----EGTYFLMAELP-G----------------W--D-AFRLV-EEARVALIPASAFY 337 (381)
T ss_dssp HHHHHHHHHHHHHT-TCCEECC----SBSSEEEEECT-T----------------C--C-HHHHH-HHTCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHC-CCEecCC----CcceEEEEecC-h----------------H--h-HHHHH-HhCCEEEecchHhC
Confidence 99999999999875 7888765 22444443333 1 1 2 55555 45799999887765
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
... . .++++||+++. +++++++++++|+.+++..+
T Consensus 338 ~~~-~------------------------~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r 372 (381)
T 1v2d_A 338 LED-P------------------------PKDLFRFAFCK--TEEELHLALERLGRVVNSPR 372 (381)
T ss_dssp SSS-C------------------------CTTEEEEECCS--CHHHHHHHHHHHHHHC----
T ss_pred CCC-C------------------------CCCEEEEEeCC--CHHHHHHHHHHHHHHHhhcc
Confidence 210 0 25899999986 99999999999998876543
No 83
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.95 E-value=2.3e-26 Score=245.06 Aligned_cols=344 Identities=11% Similarity=0.015 Sum_probs=232.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
.+++++.+..+ +.++.+.+++.+.+... .. .|..+ ..++++.+.+++++.+| .+++ +|++| +|+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~-~y~~~--~~~l~~~la~~l~~~~g~~~~~~-~v~~t-~g~~~a~ 102 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET----VL-GYTGP--TEEYKKTVKKWMKDRHQWDIQTD-WIINT-AGVVPAV 102 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC----CC-SSBCC--CHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SSHHHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC----CC-CCCCC--cHHHHHHHHHHHHHHhCCCCChh-hEEEc-CCHHHHH
Confidence 45555554442 35678888888776421 11 11111 23444455555555567 5555 89998 7888889
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-CCC--CCCHHHHHHHHhhhcc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-DDG--LLDIEALRSKLELYKD 230 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~~g--~ld~e~L~~al~~~~~ 230 (609)
..++.++ +++|| .|++..+.|+++...++..|++++.++.+ ++| .+|+++|++++++
T Consensus 103 ~~~~~~l---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--- 162 (399)
T 1c7n_A 103 FNAVREF---------------TKPGD--GVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--- 162 (399)
T ss_dssp HHHHHHH---------------CCTTC--EEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC---
T ss_pred HHHHHHh---------------cCCCC--EEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc---
Confidence 9888876 36788 69999999999998888899999999886 333 5899999999974
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC--CCccEEEEcCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT--DGYDAIFLSTHKFLG 301 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~--~~~D~v~~S~hK~lg 301 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++... ...++..+.. .+.++++.|+||++|
T Consensus 163 -~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 241 (399)
T 1c7n_A 163 -KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFN 241 (399)
T ss_dssp -TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHT
T ss_pred -CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhcc
Confidence 47899999999999999999 8999999999999999999987632 1223332211 144688899999997
Q ss_pred CCC-CcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 302 GPG-SPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 302 gp~-g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
.|+ .+|++++++ ++ ++.+.+. ......++++......+...+. ......+.
T Consensus 242 ~~G~r~G~~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~ 294 (399)
T 1c7n_A 242 IAGMGMSNIIIKNPDI--RERFTKS------------------------RDATSGMPFTTLGYKACEICYK-ECGKWLDG 294 (399)
T ss_dssp CGGGCCEEEECCCHHH--HHHHHHH------------------------HHHTTCCCCCHHHHHHHHHHHH-HCHHHHHH
T ss_pred ccchheEEEEECCHHH--HHHHHHH------------------------HhhcccCCCCHHHHHHHHHHHh-CChHHHHH
Confidence 443 479999974 45 2222111 0111122333333222221221 11224567
Q ss_pred HHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 380 IKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
+.++.+++++++.+.|++ +|++++..+ ..+++.+...+ .. ..+...+.+.|.+++||.++
T Consensus 295 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~v~ 355 (399)
T 1c7n_A 295 CIKVIDKNQRIVKDFFEVNHPEIKAPLI----EGTYLQWIDFR-AL--------------KMDHKAMEEFMIHKAQIFFD 355 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSBCCCC----SBSSEEEEECG-GG--------------CCCHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCeEecC----CceEEEEEEcc-cC--------------CCCHHHHHHHHHHhCCEEEe
Confidence 777888889999999987 788877644 34555443333 10 03567888888655799999
Q ss_pred cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 459 GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 459 ~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+|..|... .++++||+++. ++++++.+++.|+++++..
T Consensus 356 ~g~~~~~~---------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 393 (399)
T 1c7n_A 356 EGYIFGDG---------------------------GIGFERINLAA--PSSVIQESLERLNKALKDL 393 (399)
T ss_dssp EGGGGCGG---------------------------GTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCC---------------------------CCCeEEEEecc--CHHHHHHHHHHHHHHHHHH
Confidence 88776511 15899999985 4789999999999887654
No 84
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.95 E-value=3e-26 Score=243.52 Aligned_cols=338 Identities=16% Similarity=0.056 Sum_probs=225.9
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal 153 (609)
.++.|+.+... +.++.+.+++.+.+.... . .|....+..++++.+.+++.+..|. +++ +|++| +|+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~-~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~g~~~al 104 (385)
T 1b5p_A 32 DLVALTAGEPDFDTPEHVKEAARRALAQGK----T-KYAPPAGIPELREALAEKFRRENGLSVTPE-ETIVT-VGGSQAL 104 (385)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTTC----C-SCCCTTCCHHHHHHHHHHHHHTTCCCCCGG-GEEEE-SHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHHhCCCCChH-HEEEc-CChHHHH
Confidence 35566555432 345778888877664311 1 1111112234444444444444454 444 89998 8888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|+++.++|+.+...++..|++++.+++++ ++.+|+++|+++++
T Consensus 105 ~~~~~~l---------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----- 162 (385)
T 1b5p_A 105 FNLFQAI---------------LDPGD--EVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT----- 162 (385)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-----
T ss_pred HHHHHHh---------------cCCCC--EEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-----
Confidence 9998876 37888 699999999999888999999999999975 45789999999997
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCCCC-
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPG- 304 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~- 304 (609)
++++++++++++||||.+.+ +++|+++|++||+++|+|++++.... ..++..+.. +.++++.|+||++|.|+
T Consensus 163 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~ 241 (385)
T 1b5p_A 163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGW 241 (385)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGG
T ss_pred CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCccc
Confidence 57899999999999999977 78899999999999999999775322 122222211 45788999999998442
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHHHHHhcCHHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~~~g~~~i~~~ 383 (609)
++|++++++++ ++.+.+. ......+.+.+.+.+ .+++..........+.+.++
T Consensus 242 RiG~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 295 (385)
T 1b5p_A 242 RIGYACGPKEV--IKAMASV------------------------SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295 (385)
T ss_dssp CCEEEECCHHH--HHHHHHH------------------------HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ceEEEEeCHHH--HHHHHHH------------------------HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 38999998877 2222111 000111233333322 12221100011235667778
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.++.++++.+.|+++ ++++..+ ..+++.+...+ .. ..+..++.+.|. +.||.+++|..|
T Consensus 296 ~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~l~~~l~-~~gv~v~~g~~f 354 (385)
T 1b5p_A 296 YRRRRDLLLEGLTAL-GLKAVRP----SGAFYVLMDTS-PI--------------APDEVRAAERLL-EAGVAVVPGTDF 354 (385)
T ss_dssp HHHHHHHHHHHHHHH-TCCBCCC----SBTTEEEEECT-TT--------------CSSHHHHHHHHH-HTTEECEESGGG
T ss_pred HHHHHHHHHHHHHHC-CCeecCC----CeeEEEEEecC-CC--------------CCCHHHHHHHHH-HCCeEEeccccc
Confidence 888888888888876 7776654 23444443332 10 145778888887 579999988766
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.. ++++|||++ +++++++.+++.|++++
T Consensus 355 ~~-----------------------------~~~iRis~~--~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 355 AA-----------------------------FGHVRLSYA--TSEENLRKALERFARVL 382 (385)
T ss_dssp TC-----------------------------TTEEEEECC--SCHHHHHHHHHHGGGGC
T ss_pred CC-----------------------------CCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 41 379999997 78999999888887654
No 85
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=5.8e-26 Score=240.75 Aligned_cols=333 Identities=14% Similarity=0.056 Sum_probs=230.7
Q ss_pred eEEecCCCCC----CChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 78 LTYADHTASG----RSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 78 ~vyld~~a~g----~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
..|+|.+++. +.++.+.+++.+.+... .+++.. ...........++++.+++++|.+ +.+++++|+ ++
T Consensus 39 ~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGt-~a 111 (384)
T 1bs0_A 39 RQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGS---GHVSGYSVVHQALEEELAEWLGYS---RALLFISGF-AA 111 (384)
T ss_dssp EEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSB---TTTTCCCHHHHHHHHHHHHHHTCS---EEEEESCHH-HH
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCc---CcccCChHHHHHHHHHHHHHhCCC---cEEEeCCcH-HH
Confidence 4577877643 35678999988877542 111111 111112356788999999999985 345555885 56
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..++.++ +++|| .|+++.+.|+++...++..|++++.++. .|+++|++++++.. +
T Consensus 112 ~~~~~~~~---------------~~~gd--~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~--~ 167 (384)
T 1bs0_A 112 NQAVIAAM---------------MAKED--RIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPC--P 167 (384)
T ss_dssp HHHHHHHH---------------CCTTC--EEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCC--S
T ss_pred HHHHHHHh---------------CCCCc--EEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcC--C
Confidence 76666665 36888 7999999999999999999999999984 48999999997421 1
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCccc---ccC-CCCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVE---IDV-RSGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~---id~-~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
+++++++++++||||.+.|+++|.++|++||+++|+|++++.+... ..+ .... .+.|+++.|+||++| |.| |+
T Consensus 168 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~-~~G-G~ 244 (384)
T 1bs0_A 168 GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFG-VSG-AA 244 (384)
T ss_dssp SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTS-SCC-EE
T ss_pred CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcC-CCCcEEEeeccchhh-ccC-cE
Confidence 4789999999999999999999999999999999999998765421 111 1111 257999999999998 666 99
Q ss_pred EEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHH--HHHHHHHHHHHHhcCHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQ--MIRAALAFWVKEYIGHEVIKKQEE 385 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~--~~~aal~~~~~~~~g~~~i~~~~~ 385 (609)
+++++++ ++.+... ...+. .++++... .+.+++... +..+.+.+.++.+
T Consensus 245 ~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~ 296 (384)
T 1bs0_A 245 VLCSSTV--ADYLLQF------------------------ARHLIYSTSMPPAQAQALRASLAVI--RSDEGDARREKLA 296 (384)
T ss_dssp EEECHHH--HHHHHHH------------------------CHHHHSSBCCCHHHHHHHHHHHHHH--HSHHHHHHHHHHH
T ss_pred EEeCHHH--HHHHHHh------------------------chhhhcCCCCCHHHHHHHHHHHHHH--hccccHHHHHHHH
Confidence 9999887 2222110 00011 11223222 223344432 1113467788889
Q ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC
Q 038499 386 TYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG 465 (609)
Q Consensus 386 ~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~ 465 (609)
++++++.+.|+++ ++++..+ ..+++++.+.. . .+...+.+.|.++ ||.+++|..+..
T Consensus 297 ~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~----------------~~~~~l~~~l~~~-gi~v~~~~~~~~ 353 (384)
T 1bs0_A 297 ALITRFRAGVQDL-PFTLADS----CSAIQPLIVGD-N----------------SRALQLAEKLRQQ-GCWVTAIRPPTV 353 (384)
T ss_dssp HHHHHHHHHHTTS-SCEECSC----CSSBCCEEEES-H----------------HHHHHHHHHHHHT-TEECCEECTTSS
T ss_pred HHHHHHHHHHHhc-CCcccCC----CCCEEEEEeCC-H----------------HHHHHHHHHHHHC-CcEEEeecCCCC
Confidence 9999999999987 7877632 33455554432 1 2466788888765 999997764321
Q ss_pred hhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 466 PYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 466 p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+. ..+++||+++.+++++|+++++++|+++
T Consensus 354 ~~--------------------------~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 354 PA--------------------------GTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CT--------------------------TCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CC--------------------------CCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 10 1479999999999999999999999875
No 86
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.95 E-value=3.2e-26 Score=243.06 Aligned_cols=341 Identities=12% Similarity=0.029 Sum_probs=230.1
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCC-cEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QED-AMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~-~vift~sGttaal 153 (609)
.+++|+.+... +.++.+.+++.+.+... .. .|....+..++.+.+.+++++.+|.+ ..+ +|++| +|+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~-~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~-~g~~~a~ 104 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVAQG----AN-QYAPMTGVQALREAIAQKTERLYGYQPDADSDITVT-AGATEAL 104 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHHTT----CC-SCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEE-SSHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHhh----cc-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEc-CChHHHH
Confidence 35677666543 35678888888877531 00 11111123445555555555556754 234 79998 7788889
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~ 232 (609)
..++.++ +++|| .|++..+.|+++...++..|++++.++.+. ++.+|+++|+++++ +
T Consensus 105 ~~~~~~~---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----~ 162 (386)
T 1u08_A 105 YAAITAL---------------VRNGD--EVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-----E 162 (386)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-----T
T ss_pred HHHHHHh---------------CCCCC--EEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-----c
Confidence 8888876 36788 699999999999888899999999999876 57799999999997 5
Q ss_pred CceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEEcCCCCCCCCC
Q 038499 233 RPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFLSTHKFLGGPG 304 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (609)
+++++++++++||||.+.| +++|+++|++||+++|+|++++... ....+..+. ..+.|+++.|+||++|.|+
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 242 (386)
T 1u08_A 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG 242 (386)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG
T ss_pred cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc
Confidence 8999999999999999986 5889999999999999999987522 111222110 1257999999999998332
Q ss_pred -CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHHH
Q 038499 305 -SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIKK 382 (609)
Q Consensus 305 -g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~~ 382 (609)
.+|++++++++ ++.+.+. ......+.+.+.+. ++.+. ++. ..+.+.+.+
T Consensus 243 ~r~G~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~-l~~~~~~~~~~~~ 293 (386)
T 1u08_A 243 WKVGYCVAPAPI--SAEIRKV------------------------HQYLTFSVNTPAQL--ALADM-LRAEPEHYLALPD 293 (386)
T ss_dssp GCCEEEECCHHH--HHHHHHH------------------------HHHHTSSCCHHHHH--HHHHH-HHHCTHHHHTHHH
T ss_pred cceEEEEcCHHH--HHHHHHH------------------------HHhhccCCChHHHH--HHHHH-HhCCcHHHHHHHH
Confidence 38999999887 2222111 00001122222221 11121 222 234567788
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.+++++++.+.|+++ ++++..+. ...++++.+.. . ...+...+.+.|.++.||.+++|..
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~~~~---~g~~~~~~~~~-~--------------~~~~~~~~~~~l~~~~gi~v~~g~~ 354 (386)
T 1u08_A 294 FYRQKRDILVNALNES-RLEILPCE---GTYFLLVDYSA-V--------------STLDDVEFCQWLTQEHGVAAIPLSV 354 (386)
T ss_dssp HHHHHHHHHHHHTTSS-SCEECCCC---BSSEEEEECTT-T--------------CCSCHHHHHHHHHHHSCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHC-CCeecCCC---ceEEEEEecCC-C--------------CCCCHHHHHHHHHHhCCEEEeCchH
Confidence 8889999999999987 88877542 22334443332 1 0024678888776667999998865
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
|.... . .++++||+++ +++++++.++++|++
T Consensus 355 f~~~~-~------------------------~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 355 FCADP-F------------------------PHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp GCSSC-C------------------------CSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred hCCCC-C------------------------CCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 54210 0 2589999997 489999999998853
No 87
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.95 E-value=4.2e-26 Score=244.50 Aligned_cols=347 Identities=11% Similarity=0.044 Sum_probs=230.1
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CC--CCCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GG--GQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~--~~~~~vift~sGt 149 (609)
.++.|+.+... +.++.+.+++.+.+... ..+ .|... ....++++.+++++ |. +++++|++| +|+
T Consensus 38 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~--~~~--~y~~~----~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t-~g~ 108 (412)
T 2x5d_A 38 DIIDLSMGNPDGPTPPHIVEKLCTVAQRE--DTH--GYSTS----RGIPRLRRAISHWYRDRYDVQIDPESEAIVT-IGS 108 (412)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHTC-------------CT----TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-SCH
T ss_pred CEEecCCCCCCCCCCHHHHHHHHHHHhCC--CCC--CCCCC----CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEc-CCh
Confidence 35555544432 25678888888776432 011 01111 11345566666666 85 341389998 778
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-C-CCCHHHHHHHHhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-G-LLDIEALRSKLEL 227 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g-~ld~e~L~~al~~ 227 (609)
++++..++..+ +++|| .|++..+.|+++...++..|++++.++.+++ + .+|+++|+++++
T Consensus 109 ~~a~~~~~~~~---------------~~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~- 170 (412)
T 2x5d_A 109 KEGLAHLMLAT---------------LDHGD--TILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI- 170 (412)
T ss_dssp HHHHHHHHHHH---------------CCTTC--EEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-
T ss_pred HHHHHHHHHHh---------------CCCCC--EEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-
Confidence 88899888876 36888 6999999999999889999999999998864 3 378899999987
Q ss_pred hccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCC-CCccEEEEcCCCC
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQT-DGYDAIFLSTHKF 299 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~-~~~D~v~~S~hK~ 299 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++.... ..++..+.. .+.|+++.|+||+
T Consensus 171 ----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (412)
T 2x5d_A 171 ----PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKS 246 (412)
T ss_dssp ----SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-C
T ss_pred ----cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccc
Confidence 57899999999999999987 57899999999999999999886432 223322211 2568999999999
Q ss_pred CCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCH
Q 038499 300 LGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGH 377 (609)
Q Consensus 300 lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~ 377 (609)
+|.|+ ++|++++++++ ++.+... ......+.+...... +.+++ .. ....
T Consensus 247 ~~~~G~r~G~~~~~~~~--~~~l~~~-------------------------~~~~~~~~~~~~~~a-~~~~l-~~~~~~~ 297 (412)
T 2x5d_A 247 YNMAGWRIGFMVGNPEL--VSALARI-------------------------KSYHDYGTFTPLQVA-AIAAL-EGDQQCV 297 (412)
T ss_dssp CSCTTSCCEEEEECHHH--HHHHHHH-------------------------HHHHCCCCCHHHHHH-HHHHH-HSCSHHH
T ss_pred cCCcccceEEEEcCHHH--HHHHHHH-------------------------HhhhccCCCHHHHHH-HHHHH-hCCHHHH
Confidence 97443 48999998887 2222110 000012223222222 22222 11 1235
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC---ChHHHHHHHhhhcC
Q 038499 378 EVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL---HGPFVATLLNDLFG 454 (609)
Q Consensus 378 ~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l---~~~~v~~~L~~~~G 454 (609)
+.+.++.+++++++.+.|+++ ++++..+ ..+++.+...+ .. + +...+++.|.+++|
T Consensus 298 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~-~~---------------~~~~~~~~~~~~l~~~~g 356 (412)
T 2x5d_A 298 RDIARQYQQRRDVLVKGLREA-GWMVENP----KASMYVWAKIP-EP---------------YAHLGSLEFAKKLLQDAK 356 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCCCCCC----SBSSEEEEECC-TT---------------TGGGCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEecCC----CeeeEEEEEcC-Cc---------------cCCCCHHHHHHHHHHHCC
Confidence 677788888899999988876 6666543 34544444333 11 2 46778888866679
Q ss_pred cEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCCCc
Q 038499 455 IQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPLYN 533 (609)
Q Consensus 455 I~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~y~ 533 (609)
|.+++|..|... .++++||+++. ++++++.+++.|+++++......+.-.
T Consensus 357 i~v~~g~~f~~~---------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~~~~~~~ 406 (412)
T 2x5d_A 357 VSVSPGIGFGDY---------------------------GDDHVRFALIE--NRDRLRQAVRGIKAMFRADGLLSPQRK 406 (412)
T ss_dssp EECEEGGGGCGG---------------------------GTTEEEEECCS--CHHHHHHHHHHHHHHHHHTTCC-----
T ss_pred EEEeCchhhCCC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHhcCCcChHHH
Confidence 999988777421 14899999985 899999999999999987665554433
No 88
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.95 E-value=2.7e-26 Score=246.90 Aligned_cols=331 Identities=15% Similarity=0.119 Sum_probs=233.7
Q ss_pred CCChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+.++.|.+++.+.+... ++.+ ....++.+++++++++.+| .+++ +|+|+ +|+++++..++..+
T Consensus 73 ~~~~~~v~~a~~~~~~~~~~~y~--------~~~~~l~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~ea~~~a~~~~--- 139 (421)
T 3l8a_A 73 FLPVPEIKEAIINYGREHIFGYN--------YFNDDLYQAVIDWERKEHDYAVVKE-DILFI-DGVVPAISIALQAF--- 139 (421)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSCB--------CCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHhcCCcCCC--------CCCHHHHHHHHHHHHHHhCCCCCHH-HEEEc-CCHHHHHHHHHHHh---
Confidence 356788999998877531 1111 1125678889999999998 5555 89998 78888898888876
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-CC--CCCCHHHHHHHHhhhccCCCceEEEEe
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-DD--GLLDIEALRSKLELYKDAKRPILGSFS 240 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~~--g~ld~e~L~~al~~~~~~~~~~lv~~s 240 (609)
+++|| .|++..+.|+++...++..|++++.++++ .+ +.+|+++|++++++ +++++++++
T Consensus 140 ------------~~~gd--~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~----~~~~~vil~ 201 (421)
T 3l8a_A 140 ------------SEKGD--AVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID----NNVKIYLLC 201 (421)
T ss_dssp ------------SCTEE--EEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH----TTEEEEEEE
T ss_pred ------------cCCCC--EEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc----cCCeEEEEC
Confidence 36777 68999999999998999999999999986 33 36899999999985 579999999
Q ss_pred cccCccccc---cCHHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCC--CCccEEEEcCCCCCCCC-CCcEEEE
Q 038499 241 ACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQT--DGYDAIFLSTHKFLGGP-GSPGILL 310 (609)
Q Consensus 241 ~~sn~TG~~---~dl~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~--~~~D~v~~S~hK~lggp-~g~G~L~ 310 (609)
+++||||.+ .++++|.++|++||+++|+|++++... ....+..+.. .+.++++.|++|++|.+ .++|+++
T Consensus 202 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~ 281 (421)
T 3l8a_A 202 SPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAI 281 (421)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEE
Confidence 999999998 568889999999999999999987532 1222222211 24568889999999733 3579999
Q ss_pred Ee-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 311 MT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 311 ~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++ +++. +.+.+. ......++++.++...+..++. ......+.+.++.+++++
T Consensus 282 ~~~~~l~--~~~~~~------------------------~~~~~~~~~n~~~~~a~~aal~-~~~~~~~~~~~~~~~~~~ 334 (421)
T 3l8a_A 282 IQNESLR--RKFQYR------------------------QLANNQHEVPTVGMIATQAAFQ-YGKPWLEELKTVIEGNIK 334 (421)
T ss_dssp CCSHHHH--HHHHHH------------------------HHHTTCSCCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHH--HHHHHH------------------------HHhcccCCCCHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 98 5652 222111 1111223444444332222222 112235677888888899
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|+++|++.+..+. .+++.+...+ .. ..+...+.+.|.+++||.+++|..|...
T Consensus 335 ~l~~~L~~~~~i~~~~~~----~~~~~~v~~~-~~--------------~~~~~~l~~~l~~~~gi~v~~g~~f~~~--- 392 (421)
T 3l8a_A 335 LVIKELEAKTKIKVMEPE----GTYLVWLDFS-AY--------------AIAQPQLSEKLQNEAKVVLNDGAHFGKE--- 392 (421)
T ss_dssp HHHHHHHHHCSCEEECCS----BSSEEEEECG-GG--------------TCCTTHHHHHHHHTTCEECEEGGGGCGG---
T ss_pred HHHHHHHhCCCceEeCCC----eeEEEEEecc-cc--------------CCCHHHHHHHHHHhCCEEEECchhhCCC---
Confidence 999999877889888652 3444433333 10 1356688888876679999998877521
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +++++++.++++|+++++
T Consensus 393 ------------------------~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 393 ------------------------GKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp ------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred ------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 2589999998 699999999999988753
No 89
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.95 E-value=9.9e-27 Score=243.42 Aligned_cols=331 Identities=14% Similarity=0.076 Sum_probs=223.9
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.++|+++...++.++.|.+++.+.+.. +.. ++.......++++++++++| . +++|+||++|+ +++..+
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-----~~~----~~~~~~~~~~l~~~la~~~g-~-~~~v~~~~~gt-~a~~~a 75 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-----QAG----PYGTDELTAQVKRKFCEIFE-R-DVEVFLVPTGT-AANALC 75 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-----CCC----STTCSHHHHHHHHHHHHHHT-S-CCEEEEESCHH-HHHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-----ccc----ccccchHHHHHHHHHHHHhC-C-CCcEEEeCCcc-HHHHHH
Confidence 577888877778889999999886531 111 11124567889999999999 4 33689985555 467666
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH--HHHc--CceEEEEecCCCCCCCHHHHHH-HHhhh--c
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--WRQS--LAEVVEIGLDDDGLLDIEALRS-KLELY--K 229 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--~~~~--G~~vv~v~~~~~g~ld~e~L~~-al~~~--~ 229 (609)
+.++ +++|| .|++++.+|++.... +... |++++.++.+ ++.+|+++|++ ++++. .
T Consensus 76 l~~~---------------~~~gd--~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~ 137 (356)
T 1v72_A 76 LSAM---------------TPPWG--NIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDV 137 (356)
T ss_dssp HHTS---------------CCTTE--EEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCT
T ss_pred HHHh---------------cCCCC--EEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhh
Confidence 6654 36777 799999999887655 7777 9999999875 47799999999 88731 0
Q ss_pred cCCCceEEEEecccCccccc---cCHHHHHHHHHHhCCeEEEeccccCCc---ccccCCCCC-CCCccEEEEcCCCCCCC
Q 038499 230 DAKRPILGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPY---VEIDVRSGQ-TDGYDAIFLSTHKFLGG 302 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~---~dl~~I~~la~~~g~~vivD~A~~~~~---~~id~~~~~-~~~~D~v~~S~hK~lgg 302 (609)
..++++++++++++| ||.+ .++++|.++|++||+++|+|++++.+. ......... ..++|++++|+||+ |+
T Consensus 138 ~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~ 215 (356)
T 1v72_A 138 HTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV 215 (356)
T ss_dssp TSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC
T ss_pred ccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC
Confidence 112689999999876 9995 457889999999999999999976321 111111111 02679999999999 77
Q ss_pred CCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHH
Q 038499 303 PGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 303 p~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~ 382 (609)
|.|.|++++++++. +.+.......+ ....+..... .+.+.++ +...++.+.+
T Consensus 216 ~~G~g~~~~~~~~~--~~~~~~~~~~~-----------------------~~~~~~~~~~-~~~~~~l--~~~~~~~~~~ 267 (356)
T 1v72_A 216 LAAEAIVLFNTSLA--TEMSYRRKRAG-----------------------HLSSKMRFLS-AQIDAYL--TDDLWLRNAR 267 (356)
T ss_dssp SSCEEEEESSGGGH--HHHHHHHHHTT-----------------------CCCSSTHHHH-HHHHHHT--STTHHHHHHH
T ss_pred cCccEEEEECHHHH--hhHHHHhhccC-----------------------chhhhHHHHH-HHHHHHH--HhhhHHHHHH
Confidence 88778998888772 22211000000 0011111111 1122222 1222445667
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.+++++++.+.|++++++++..+. ...++++.+ + ..+.+.|.+ .||.+++|.
T Consensus 268 ~~~~~~~~l~~~L~~~~g~~~~~~~---~~~~~~~~~-~---------------------~~~~~~l~~-~gi~v~~g~- 320 (356)
T 1v72_A 268 KANAAAQRLAQGLEGLGGVEVLGGT---EANILFCRL-D---------------------SAMIDALLK-AGFGFYHDR- 320 (356)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESCC---CSSEEEEEE-C---------------------HHHHHHHHH-TTCBCBCSS-
T ss_pred HHHHHHHHHHHHHhhCCCcEEccCC---CccEEEEEc-C---------------------HHHHHHHHh-cCeEEeccc-
Confidence 7788999999999998899987652 334443332 2 267777855 599998764
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+. ++++|+++++.+|++|+++++++|+++++.
T Consensus 321 ~~------------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 321 WG------------------------------PNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp SS------------------------------TTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred cC------------------------------CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 11 278999999999999999999999987654
No 90
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.95 E-value=9.7e-26 Score=242.08 Aligned_cols=354 Identities=17% Similarity=0.092 Sum_probs=225.0
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
+.+|...+-.-+.++.+.+.+. ... .+ .++.......+++++++++++|.+ +++++++ ++++++.+
T Consensus 22 ~pi~~s~~~~~~~~~~~~~~~~--~~~----~~----~y~~~~~~~~~~l~~~la~~~g~~---~~~~~~~-gt~a~~~a 87 (412)
T 2cb1_A 22 LPIYAVAAYGFKTLEEGQERFA--TGE----GY----VYARQKDPTAKALEERLKALEGAL---EAVVLAS-GQAATFAA 87 (412)
T ss_dssp CCCCCCSBCCCSSHHHHHHHHH--HCC----SC----SBTTTCCHHHHHHHHHHHHHHTCS---EEEEESS-HHHHHHHH
T ss_pred CCccccceeecCChHHHHHHhc--ccc----Cc----CcCCCCChHHHHHHHHHHHHhCCC---cEEEECC-HHHHHHHH
Confidence 4456654444566776666653 111 11 112222355788999999999985 6888855 45678877
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..+ +++|| .|+++..+|+++...|.. .|++++.++. |+++|+++++ +
T Consensus 88 l~~l---------------~~~gd--~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-----~ 139 (412)
T 2cb1_A 88 LLAL---------------LRPGD--EVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-----A 139 (412)
T ss_dssp HHTT---------------CCTTC--EEEEETTCCHHHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-----T
T ss_pred HHHH---------------hCCCC--EEEEeCCCchhHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-----c
Confidence 7654 36888 699999999998877653 6999999985 3899999998 6
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLM 311 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~ 311 (609)
++++|++++++||||.+.|+++|+++|++||+++|+|++++.+........ .+.|++++|+||+++||++ +|++++
T Consensus 140 ~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~---~~~di~~~S~~K~~~~~~~~~G~~~~ 216 (412)
T 2cb1_A 140 KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLA---WGAHVVVESLTKWASGHGSVLGGAVL 216 (412)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGG---GTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccc---cCCeEEEECCcccccCCCCcEEEEEE
Confidence 899999999999999999999999999999999999999987722111111 2689999999999998876 788887
Q ss_pred echhhcc---CCC-CCCccCCCceEeeccccccccccccccccc--ccCCC--hhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 312 TKALYQL---GSF-PPSTCGGGTVNYVNGFNEKDTLYLEDIEER--ESGGT--PQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 312 ~~~~~~l---~~~-~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r--~~~gt--p~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
.++.... ..+ .|...|+. +...+. ...+.+..... ...|. .+.. +.+.+. ....++...++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~g~~---~~~~~~--~~~~~~~~r~~~~~~~g~~~~~~~----a~~~~~--~l~~l~~~~~~ 285 (412)
T 2cb1_A 217 SRETELWRNYPQFLQPDLKGQI---PWEALR--ARCFPERVRTLGLSLCGMALSPFN----AYLLFQ--GLETVALRVAR 285 (412)
T ss_dssp ECCCSGGGGSGGGGCC----------HHHHG--GGHHHHHHHHHHTTTTCCCCCHHH----HHHHHH--HGGGHHHHHHH
T ss_pred eccccccccccccccccccccc---hhhccc--hHHHHHHHHHHHHHhcCCCCChHH----hHHHHc--CCchHHHHHHH
Confidence 6632000 011 12221111 000000 00111111110 01121 1111 111111 11223444556
Q ss_pred HHHHHHHHHHHhCCCCceEEe-CCCC-------------CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 384 EETYIERALERLLPNQNIKIL-GNTS-------------TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~-~~~~-------------~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
..++.+++.+.|.+++++.++ .+.. ....++++|.+ . +.+.+.+.|
T Consensus 286 ~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-------------------~~~~~~~~l 345 (412)
T 2cb1_A 286 MSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-------------------DLERASRFL 345 (412)
T ss_dssp HHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-------------------SHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-------------------CHHHHHHHH
Confidence 667889999999998898744 3321 13567888888 5 356677777
Q ss_pred hhhcCcEeccC---------cccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 450 NDLFGIQARGG---------CACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 450 ~~~~GI~v~~G---------~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
. ..||.+ +| +.|+.+ .|.. +...... ..|+.++.||+|++.++++++++.++++|+.
T Consensus 346 ~-~~~i~~-~~s~g~~~sl~~~~~~~-~~~~--~~~~~~~---------~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 346 G-AIRLLK-AANLGDARTLLVHPWTT-THSR--LKEEARL---------QAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp H-HCSSEE-CSCCSCSSCEEECTTTT-TTTT--SCHHHHH---------HTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred H-hCCeee-ecccCCCcceeecCccc-cccc--CCHHHHH---------hcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 4 469999 88 467632 2211 1110000 0233479999999999999999999999874
No 91
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=9.3e-26 Score=239.80 Aligned_cols=344 Identities=10% Similarity=0.037 Sum_probs=229.7
Q ss_pred CceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHH-HHHHHHHHHHHHhC--CCCCCcEEEeCChHHH
Q 038499 76 RRLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTN-MVHEASNYIKKCLG--GGQEDAMIFCGSGTTA 151 (609)
Q Consensus 76 ~~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~-~~~e~r~~ia~~~g--~~~~~~vift~sGtta 151 (609)
++++++..+... +.++.|.+++.+.+... .. .|..+ ..+ +++.+.+++.+.+| .+++ +|++| +|+++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~-~y~~~--~~~~lr~~la~~l~~~~g~~~~~~-~v~~t-~g~~~ 98 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHG----VF-GYSRW--KNDEFLAAIAHWFSTQHYTAIDSQ-TVVYG-PSVIY 98 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTC----CC-CCCCS--CCHHHHHHHHHHHHHHSCCCCCGG-GEEEE-SCHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCC----CC-CCCCC--ChHHHHHHHHHHHHHhcCCCCCHH-HEEEc-CCHHH
Confidence 456777655543 45678999988877431 11 11111 223 44444444444456 5555 89998 78888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCC---CCCHHHHHHHHhhh
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDG---LLDIEALRSKLELY 228 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g---~ld~e~L~~al~~~ 228 (609)
++..++.++ +++|| .|++..+.|+++...++..|++++.++.+.++ .+|+++|++++++
T Consensus 99 al~~~~~~l---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~- 160 (390)
T 1d2f_A 99 MVSELIRQW---------------SETGE--GVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK- 160 (390)
T ss_dssp HHHHHHHHS---------------SCTTC--EEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS-
T ss_pred HHHHHHHHh---------------cCCCC--EEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc-
Confidence 999888876 36788 68999999999998899999999999986542 5899999999973
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCCCCCccEEEEcCCCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~~~~~D~v~~S~hK~lg 301 (609)
.+++++++++++||||.+.| +++|+++|++||+++|+|++++... ...++..+.....|. +.|+||++|
T Consensus 161 ---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~ 236 (390)
T 1d2f_A 161 ---PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFN 236 (390)
T ss_dssp ---TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHT
T ss_pred ---CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhc
Confidence 37899999999999999988 7889999999999999999988642 222332221111267 999999997
Q ss_pred CCC-CcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 302 GPG-SPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 302 gp~-g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
.|+ .+|+++++ +++ ++.+.....| ....++++......+...+.. .....+.
T Consensus 237 ~~G~r~G~~~~~~~~~--~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~ 290 (390)
T 1d2f_A 237 IPALTGAYGIIENSSS--RDAYLSALKG-----------------------RDGLSSPSVLALTAHIAAYQQ-GAPWLDA 290 (390)
T ss_dssp CGGGCCEEEEECSHHH--HHHHHHHHHT-----------------------TSCCCSCCHHHHHHHHHHHHH-CHHHHHH
T ss_pred ccChhheEEEECCHHH--HHHHHHHHhh-----------------------hcccCCCCHHHHHHHHHHHhc-CHHHHHH
Confidence 332 47999996 455 2222111000 111234444333222111211 1223567
Q ss_pred HHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEec
Q 038499 380 IKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQAR 458 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~ 458 (609)
+.++.+++++++.+.|++ +|++++..+ ..+++.+...+ .. ..+...+.+.|.++.||.++
T Consensus 291 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~l~~~l~~~~gi~v~ 351 (390)
T 1d2f_A 291 LRIYLKDNLTYIADKMNAAFPELNWQIP----QSTYLAWLDLR-PL--------------NIDDNALQKALIEQEKVAIM 351 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCCCCCC----SBCSEEEEECG-GG--------------CCCHHHHHHHHHHTTCEECE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEecC----CccEEEEEEcc-cc--------------CCCHHHHHHHHHHHcCEEee
Confidence 777888889999999987 788876644 34555443333 10 03567888888755799999
Q ss_pred cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 459 GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 459 ~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+|..|. +. .++++||+++. ++++++.+++.|++++++
T Consensus 352 ~g~~f~-~~--------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 352 PGYTYG-EE--------------------------GRGFVRLNAGC--PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp EGGGGC-GG--------------------------GTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred CccccC-CC--------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 987775 10 15899999985 688999999999888754
No 92
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=3.7e-26 Score=241.15 Aligned_cols=326 Identities=13% Similarity=0.000 Sum_probs=225.3
Q ss_pred ceEEecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChH
Q 038499 77 RLTYADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGt 149 (609)
.+++++.+.... .++.+.+++.+.+.... . .|..... ..++++.+++++ | .+++ +|++| +|+
T Consensus 30 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---~--~y~~~~~----~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~ 98 (370)
T 2z61_A 30 KVIHLEIGEPDFNTPKPIVDEGIKSLKEGK---T--HYTDSRG----ILELREKISELYKDKYKADIIPD-NIIIT-GGS 98 (370)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHHHTTC---C--SCCCTTC----CHHHHHHHHHHHHHHSSCCCCGG-GEEEE-SSH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHHcCc---c--CCCCCCC----CHHHHHHHHHHHHHHhCCCCChh-hEEEC-CCh
Confidence 567887776543 46788888887764311 0 0111111 234555555555 4 4454 89998 777
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK 229 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~ 229 (609)
++++..++.++ +++|| .|++..+.|+++...++..|++++.++ +|+++|+++++
T Consensus 99 ~~a~~~~~~~~---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~--- 152 (370)
T 2z61_A 99 SLGLFFALSSI---------------IDDGD--EVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS--- 152 (370)
T ss_dssp HHHHHHHHHHH---------------CCTTC--EEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC---
T ss_pred HHHHHHHHHHh---------------cCCCC--EEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc---
Confidence 77899888876 36888 699999999999999999999999998 68999999997
Q ss_pred cCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCC-CCCccEEEEcCCCCCCCCC-
Q 038499 230 DAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQ-TDGYDAIFLSTHKFLGGPG- 304 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~-~~~~D~v~~S~hK~lggp~- 304 (609)
++++++++++++||||.+.|.+ |.++|++||+++|+|++++.+.. +.++..+. ..+.|+++.|+||++|.|+
T Consensus 153 --~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 229 (370)
T 2z61_A 153 --DKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGW 229 (370)
T ss_dssp --SSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGG
T ss_pred --cCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccc
Confidence 5789999999999999999999 99999999999999999886533 22332221 2367899999999997332
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~ 382 (609)
.+|++++++++ ++.+.+.. . ...++++..... .+++... ...+.+.+.+
T Consensus 230 r~G~~~~~~~~--~~~~~~~~------------------------~-~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~ 280 (370)
T 2z61_A 230 RIGYVISNDEI--IEAILKLQ------------------------Q-NLFISAPTISQYAALKAFEKE--TEREINSMIK 280 (370)
T ss_dssp CCEEEECCHHH--HHHHHHHH------------------------H-HHTSSSCHHHHHHHGGGGSHH--HHHHHHHHHH
T ss_pred eEEEEEECHHH--HHHHHHHH------------------------h-hcccCCCHHHHHHHHHHHhcc--CHHHHHHHHH
Confidence 38999999887 22221110 0 011222322221 1222210 1224566778
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.+++++++.+.|+++ ++++..+ ..+++.+...+ . +...+.+.|.+++||.+++|..
T Consensus 281 ~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~-----------------~~~~~~~~l~~~~gi~v~~g~~ 337 (370)
T 2z61_A 281 EFDRRRRLVLKYVKDF-GWEVNNP----IGAYYVFPNIG-E-----------------DGREFAYKLLKEKFVALTPGIG 337 (370)
T ss_dssp HHHHHHHHHHHHHHHT-TCBCCCC----CBTTEECCBCS-S-----------------CHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHc-CCeecCC----CcceEEEEecC-C-----------------CHHHHHHHHHHhCCEEEeCchh
Confidence 8888899999999877 7766544 23444443333 0 3667888886557999998876
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
|... .++++||+++ +++++++.++++|+++++
T Consensus 338 f~~~---------------------------~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 338 FGSK---------------------------GKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp GCGG---------------------------GSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred hCCC---------------------------CCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 6410 1489999999 699999999999988763
No 93
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.94 E-value=1.1e-25 Score=237.05 Aligned_cols=326 Identities=13% Similarity=0.021 Sum_probs=223.3
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.+++|+.+... +.++.+.+++.+.+......+. ....++++.+++++|.+++ +|++| +|+++++..
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~-----------~~~~~l~~~la~~~~~~~~-~v~~~-~g~~~al~~ 91 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIERYPD-----------ADYFHLHQALARHHQVPAS-WILAG-NGETESIFT 91 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCC-----------TTCHHHHHHHHHHHTSCGG-GEEEE-SSHHHHHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCC-----------CCHHHHHHHHHHHHCcCHH-HEEEC-CCHHHHHHH
Confidence 45666555432 2567788888887643211111 1246789999999998776 89998 788888988
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCC-HHHHHHHHhhhccCCCc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLD-IEALRSKLELYKDAKRP 234 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld-~e~L~~al~~~~~~~~~ 234 (609)
++..+ +|| .|++..+.|+++...++..|++++.++.+.+..++ ++++.++++ +++
T Consensus 92 ~~~~~-----------------~gd--~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~-----~~~ 147 (364)
T 1lc5_A 92 VASGL-----------------KPR--RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-----PDL 147 (364)
T ss_dssp HHHHH-----------------CCS--EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC-----TTC
T ss_pred HHHHc-----------------CCC--eEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhcc-----CCC
Confidence 87653 456 68888899999998899999999999987522234 455555554 578
Q ss_pred eEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc-cccCCC-CCCCCccEEEEcCCCCCCCCC-CcEE
Q 038499 235 ILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-EIDVRS-GQTDGYDAIFLSTHKFLGGPG-SPGI 308 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~-~id~~~-~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (609)
+++++++++||||.+.| +++|+++|++||+++|+|++++.... ...+-. ....+.|+++.|+||++|.|+ ++|+
T Consensus 148 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 227 (364)
T 1lc5_A 148 DCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGY 227 (364)
T ss_dssp CEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEE
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEE
Confidence 99999999999999999 88999999999999999999875321 111111 111356899999999998443 4799
Q ss_pred EE-EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 309 LL-MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 309 L~-~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
++ .++++. +.+.+. ....+++...... +.+++ +.....+.+.++.+++
T Consensus 228 ~~~~~~~~~--~~l~~~---------------------------~~~~~~~~~~~~~-~~~~l-~~~~~~~~~~~~~~~~ 276 (364)
T 1lc5_A 228 LVNSDDAAM--ARMRRQ---------------------------QMPWSVNALAALA-GEVAL-QDSAWQQATWHWLREE 276 (364)
T ss_dssp EECCCHHHH--HHHHHH---------------------------SCTTCSCHHHHHH-HHHGG-GCHHHHHHHHHHHHHH
T ss_pred EEECCHHHH--HHHHHh---------------------------CCCCCCCHHHHHH-HHHHH-hCcHHHHHHHHHHHHH
Confidence 99 888772 222111 0011223322221 11221 1222456777888888
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++++.+.|+++|++++..+ ..+++++.+.. ....+.+.|.+ .||.+++|..|.+.
T Consensus 277 ~~~l~~~L~~~~~~~~~~~----~g~~~~~~~~~-------------------~~~~l~~~l~~-~gi~v~~g~~~~~~- 331 (364)
T 1lc5_A 277 GARFYQALCQLPLLTVYPG----RANYLLLRCER-------------------EDIDLQRRLLT-QRILIRSCANYPGL- 331 (364)
T ss_dssp HHHHHHHHHTSTTEEECCC----SSSEEEEEESC-------------------TTCCHHHHHHT-TTEECEECTTSTTC-
T ss_pred HHHHHHHHhcCCCCEECCC----CCeEEEEECCC-------------------cHHHHHHHHHH-CCcEEeeCcccCCC-
Confidence 9999999998889988643 34555544432 13357777766 49999988766421
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++||+++ +.+|+++++++|+.+++.
T Consensus 332 --------------------------~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 332 --------------------------DSRYYRVAIR---SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp --------------------------CTTEEEEECC---CHHHHHHHHHHHHHHC--
T ss_pred --------------------------CCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 2589999986 799999999999988654
No 94
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=7.7e-26 Score=243.69 Aligned_cols=360 Identities=12% Similarity=-0.001 Sum_probs=232.9
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCC-cEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QED-AMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~-~vift~sGttaal 153 (609)
.+++|+.+... +.++.+.+++.+.+... +.....|....+..++.+.+.+++.+.+|.+ ..+ +|++| +|+++++
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~-~g~~~a~ 114 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAAAANSP--DPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVT-VGAYEAL 114 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHHHHTCS--CGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhcc--ccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEe-cChHHHH
Confidence 46777766544 35678899998877542 0000011111123445555555555556853 224 79998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC----------CCCCHHHHHH
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD----------GLLDIEALRS 223 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~----------g~ld~e~L~~ 223 (609)
..++.++ +++|| .|++..+.|+++...++..|++++.++.+.+ +.+|+++|++
T Consensus 115 ~~~~~~~---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 177 (429)
T 1yiz_A 115 YATIQGH---------------VDEGD--EVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEA 177 (429)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHH
T ss_pred HHHHHHh---------------cCCCC--EEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHH
Confidence 9888876 36788 6899999999998888889999999998753 5789999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCC-CCCccEEEEc
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQ-TDGYDAIFLS 295 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~-~~~~D~v~~S 295 (609)
+++ ++++++++++++||||.+.| +++|+++|++||+++|+|++++.... ...+..+. ..+.|+++.|
T Consensus 178 ~l~-----~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s 252 (429)
T 1yiz_A 178 LFN-----EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGS 252 (429)
T ss_dssp HCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEE
T ss_pred Hhc-----cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEec
Confidence 997 58999999999999999986 88999999999999999999875221 11222111 1357999999
Q ss_pred CCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-
Q 038499 296 THKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE- 373 (609)
Q Consensus 296 ~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~- 373 (609)
+||++|.|+ .+|++++++++ ++.+... ......+.+..... ++.+. +..
T Consensus 253 ~sK~~~~~G~r~G~~~~~~~~--~~~l~~~-------------------------~~~~~~~~~~~~~~-a~~~~-l~~~ 303 (429)
T 1yiz_A 253 AGKTFSLTGWKIGWAYGPEAL--LKNLQMV-------------------------HQNCVYTCATPIQE-AIAVG-FETE 303 (429)
T ss_dssp HHHHHTCGGGCCEEEESCHHH--HHHHHHH-------------------------HHTTTCCCCHHHHH-HHHHH-HHHH
T ss_pred chhccCCCCcceEEEEeCHHH--HHHHHHH-------------------------HhhcccCCChHHHH-HHHHH-Hhcc
Confidence 999998332 38999999887 2222110 00011122222211 11122 222
Q ss_pred -------hcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHH
Q 038499 374 -------YIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVA 446 (609)
Q Consensus 374 -------~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 446 (609)
....+.++++.+++++++.+.|+++ ++.+..+. ...++++.+.. ... . .. ........+...++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~g~~~~~~~~~-~~~-~--~~-~~~~~~~~~~~~l~ 374 (429)
T 1yiz_A 304 LKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQ---GGYFMVADWSS-LDS-K--VD-LTQETDARKDYRFT 374 (429)
T ss_dssp HTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECS---BSSEEEEECCS-SCT-T--TT-CCSSSSSCHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC---cceEEEEEccc-ccc-c--cc-ccccccCCCHHHHH
Confidence 2336777888888999999999876 77776542 22234444332 100 0 00 00000012456788
Q ss_pred HHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 447 TLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 447 ~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
+.|.+++||.+++|..|..+.... ..++++||+++ +++++++.++++|+++++
T Consensus 375 ~~l~~~~gv~v~~g~~f~~~~~~~----------------------~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 375 KWMTKSVGLQGIPPSAFYSEPNKH----------------------LGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHTSEECBCGGGGSCGGGGG----------------------GTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCEEEeCchHhCCCcccC----------------------CCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 877656799999887654221000 01589999998 489999999999988753
No 95
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.94 E-value=2.8e-26 Score=245.74 Aligned_cols=351 Identities=13% Similarity=0.033 Sum_probs=231.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCC-cEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QED-AMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~-~vift~sGttaal 153 (609)
..++|+.+... +.++.+.+++.+.+... .. .|....+..++.+.+.+++.+.+|.+ ..+ +|++| +|+++++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~-~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t-~g~~~al 99 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGG----VN-QYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVT-VGATEAI 99 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHTT----CC-SCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-EHHHHHH
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEe-CCHHHHH
Confidence 35677666544 35678889988877531 00 11111123445555555555556754 223 79998 7888889
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC---CCCCHHHHHHHHhhhcc
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD---GLLDIEALRSKLELYKD 230 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~---g~ld~e~L~~al~~~~~ 230 (609)
..++.++ +++|| .|+++.+.|+++...++..|++++.++.+.+ +.+|+++|+++++
T Consensus 100 ~~~~~~~---------------~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~---- 158 (411)
T 2o0r_A 100 AAAVLGL---------------VEPGS--EVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT---- 158 (411)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC----
T ss_pred HHHHHHh---------------cCCCC--EEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc----
Confidence 9888876 36888 6999999999998888899999999998653 5689999999997
Q ss_pred CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcc----cccCCCCC-CCCccEEEEcCCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQ-TDGYDAIFLSTHKFLGG 302 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~-~~~~D~v~~S~hK~lgg 302 (609)
++++++++++++||||.+.|. ++|+++|++||+++|+|++++.+.. ..++..+. ..+.|+++.|+||++|.
T Consensus 159 -~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 237 (411)
T 2o0r_A 159 -PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNC 237 (411)
T ss_dssp -TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTC
T ss_pred -cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCC
Confidence 579999999999999999875 8899999999999999999876432 12222221 13579999999999983
Q ss_pred CC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH-HHHHHHHHHHHHhcCHHHH
Q 038499 303 PG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ-MIRAALAFWVKEYIGHEVI 380 (609)
Q Consensus 303 p~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~-~~~aal~~~~~~~~g~~~i 380 (609)
|+ .+|++++++++. +.+... ......+.+...+ .+.+++.. ...+.+.+
T Consensus 238 ~G~r~G~~~~~~~~~--~~l~~~------------------------~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~ 288 (411)
T 2o0r_A 238 TGWKIGWACGPAELI--AGVRAA------------------------KQYLSYVGGAPFQPAVALALDT---EDAWVAAL 288 (411)
T ss_dssp TTTCEEEEECCHHHH--HHHHHH------------------------HHHHTSCCCTTHHHHHHHHHHH---CHHHHHHH
T ss_pred ccceEEEEeeCHHHH--HHHHHH------------------------HhhccCCCChHHHHHHHHHHhC---ChHHHHHH
Confidence 32 389999988772 222111 0000111112222 11222221 12245677
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC
Q 038499 381 KKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG 460 (609)
Q Consensus 381 ~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G 460 (609)
.++.+++++++.+.|+++ ++.+..+ ..+++.+...+ .. ...+...+.+.|.++.||.+++|
T Consensus 289 ~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~-~~-------------~~~~~~~~~~~l~~~~gi~v~~g 349 (411)
T 2o0r_A 289 RNSLRARRDRLAAGLTEI-GFAVHDS----YGTYFLCADPR-PL-------------GYDDSTEFCAALPEKVGVAAIPM 349 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCEECCC----CBSSEEEEECG-GG-------------TCCCHHHHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHHHHHHHHHc-CCEecCC----CeeEEEEEecC-CC-------------CCCCHHHHHHHHHHhCCEEEcCh
Confidence 788888899999999876 7887654 23434333333 10 00246778887766679999998
Q ss_pred cccCCh---hhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 461 CACAGP---YGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 461 ~~ca~p---~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..|.++ .++.+... .++++||+++ ++++|++.++++|+++++.
T Consensus 350 ~~f~~~~~~~~~~~~~~-------------------~~~~iRis~~--~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 350 SAFCDPAAGQASQQADV-------------------WNHLVRFTFC--KRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp GGGSCCC--------CC-------------------GGGCEEEECC--SCHHHHHHHHHHHGGGGC-
T ss_pred hhhCCCccccccccccC-------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 877422 12222111 1479999997 4899999999999876543
No 96
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=3.7e-25 Score=233.63 Aligned_cols=328 Identities=11% Similarity=0.036 Sum_probs=223.2
Q ss_pred EEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCCCcEEEeCChHHHHHHH
Q 038499 79 TYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKC--LGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 79 vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~--~g~~~~~~vift~sGttaal~~ 155 (609)
++|+.+... +.++.+.+++.+.+.......+. +..... .++.+.+.+++++. ++.+++ +|+++ +|+++++..
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--y~~~~~-~~l~~~la~~l~~~~g~~~~~~-~v~~~-~G~~~al~~ 107 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNR--YPERDA-VELRDELAAYITKQTGVAVTRD-NLWAA-NGSNEILQQ 107 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTS--CCCTTC-HHHHHHHHHHHHHHHCCCCCGG-GEEEE-SHHHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhccccccc--CCCccH-HHHHHHHHHhhhhcccCCCChH-hEEEC-CChHHHHHH
Confidence 566655442 35678888888777532000111 111111 23333333333333 344555 89998 899999988
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
++.++ +++|| .|++..++|+++...++..|++++.++.+.++.+|+++|++++++ .+++
T Consensus 108 ~~~~l---------------~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~ 166 (369)
T 3cq5_A 108 LLQAF---------------GGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRA----KQPD 166 (369)
T ss_dssp HHHHH---------------CSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHH----HCCS
T ss_pred HHHHh---------------cCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhc----cCCC
Confidence 88876 36888 699999999999988899999999999887778999999999983 2788
Q ss_pred EEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCC-CCCC-ccEEEEcCCCCCCCCC-CcEEEEEe
Q 038499 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSG-QTDG-YDAIFLSTHKFLGGPG-SPGILLMT 312 (609)
Q Consensus 236 lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~-~~~~-~D~v~~S~hK~lggp~-g~G~L~~~ 312 (609)
++++++++||||.+.|.+++.++++.+++++|+|++++.+....++... ...+ .++++.|+||++|.|+ ++|+++++
T Consensus 167 ~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 246 (369)
T 3cq5_A 167 IVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246 (369)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC
Confidence 9999999999999999999999999999999999998765432221111 1123 5689999999997443 47999999
Q ss_pred chhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 313 KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
+++. +.+.... . ..+++...... +.+.+ .+....+.+.++.+++++++.
T Consensus 247 ~~~~--~~l~~~~------------------------~---~~~~~~~~~~a-~~~~l-~~~~~~~~~~~~~~~~~~~l~ 295 (369)
T 3cq5_A 247 PAFI--DAVMLVR------------------------L---PYHLSALSQAA-AIVAL-RHSADTLGTVEKLSVERVRVA 295 (369)
T ss_dssp THHH--HHHHTTS------------------------C---TTCSCHHHHHH-HHHHH-HTHHHHHTHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHcC------------------------C---CCCCCHHHHHH-HHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence 8872 2221110 0 01122222211 11111 122235667778888888999
Q ss_pred HHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 393 ERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 393 ~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
+.|++. ++++..+ ..+++++.+ + .+...+.+.|. +.||.+++| .
T Consensus 296 ~~L~~~-g~~~~~~----~~~~~~~~~-~------------------~~~~~l~~~l~-~~gi~v~~~---~-------- 339 (369)
T 3cq5_A 296 ARLEEL-GYAVVPS----ESNFVFFGD-F------------------SDQHAAWQAFL-DRGVLIRDV---G-------- 339 (369)
T ss_dssp HHHHHH-TCEEECC----SSSEEEEEC-C------------------SSHHHHHHHHH-HTTEECBCC---S--------
T ss_pred HHHHhC-CCEECCC----CCeEEEEEC-C------------------CCHHHHHHHHH-HCCEEEEEC---C--------
Confidence 888774 7887633 334554433 2 24677888885 469999865 1
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++ +++|+++++++|+++++
T Consensus 340 ---------------------~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 340 ---------------------IAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ---------------------CTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred ---------------------CCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 1479999998 89999999999998864
No 97
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=2.3e-25 Score=237.61 Aligned_cols=364 Identities=13% Similarity=0.037 Sum_probs=234.6
Q ss_pred HHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHH
Q 038499 91 RYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILRE 170 (609)
Q Consensus 91 ~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (609)
+.+.+++.+.+...|.++ .| ....++++.+++++|. ++++++ +|+++++..++.+++
T Consensus 12 ~~v~~a~~~~~~~~~~~~------~g----~~~~~l~~~la~~~~~---~~v~~~-~ggt~al~~~~~~l~--------- 68 (394)
T 1o69_A 12 GNELKYIEEVFKSNYIAP------LG----EFVNRFEQSVKDYSKS---ENALAL-NSATAALHLALRVAG--------- 68 (394)
T ss_dssp CCHHHHHHHHHHHTTTSC------TT----HHHHHHHHHHHHHHCC---SEEEEE-SCHHHHHHHHHHHTT---------
T ss_pred HHHHHHHHHHHHcCCccC------CC----hHHHHHHHHHHHHhCC---CcEEEe-CCHHHHHHHHHHHcC---------
Confidence 456666666654322221 11 3467899999999998 378998 666778988888763
Q ss_pred HHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcccccc
Q 038499 171 KLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYS 250 (609)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~ 250 (609)
+++|| .|+++.++|+++...++..|++++.++.++++.+|+++|++++++.. ++++++++++ +||...
T Consensus 69 -----~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~--~~~~~v~~~~---~~G~~~ 136 (394)
T 1o69_A 69 -----VKQDD--IVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE--KKPKALILTH---LYGNAA 136 (394)
T ss_dssp -----CCTTC--EEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS--SCCCEEEEEC---GGGCCC
T ss_pred -----CCCCC--EEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc--CCceEEEEEC---CCCChh
Confidence 36888 69999999999999999999999999998888899999999998410 1688888875 899999
Q ss_pred CHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe-chhhccCCCCCCccCCC
Q 038499 251 DTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT-KALYQLGSFPPSTCGGG 329 (609)
Q Consensus 251 dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~~l~~~~p~~~ggg 329 (609)
|+++|.++|++||+++|+|++++.+....+.......++|++++|.||+++ |.++|+++++ +++. +.+.+...++.
T Consensus 137 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~--~~l~~~~~~~~ 213 (394)
T 1o69_A 137 KMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKI--EKARFYSTQAR 213 (394)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHH--HHHHHHTBTCC
T ss_pred hHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCC-CCCceEEEECCHHHH--HHHHHHHHhcc
Confidence 999999999999999999999986654333211111357889999999998 4568999996 5652 22222111110
Q ss_pred ceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCC
Q 038499 330 TVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTST 409 (609)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~ 409 (609)
. ....+...+.++..+++++.+.+... ....++...++.+++++++.+.|.++ ++++.+...
T Consensus 214 ~----------~~~~~~~~~~g~~~~~~~~~aa~~l~------~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~ 275 (394)
T 1o69_A 214 E----------NCLHYEHLDYGYNYRLSNVLGAIGVA------QMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELEN 275 (394)
T ss_dssp C----------SSSSCCCSSCCCBCBCCHHHHHHHHH------HHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTT
T ss_pred c----------cCccccccccCcccCcCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCC
Confidence 0 00001122334456677776654322 11135567788899999999999887 666654211
Q ss_pred --CCcceEEEEeccCCCC---CcCC-CCC-CCCCCCCCChHHHHHHHhhhcCcEeccCcccCC--hhhhhhc--CCChhH
Q 038499 410 --KRQAILSFNIHSSTIN---SSLG-ENT-KTETDKPLHGPFVATLLNDLFGIQARGGCACAG--PYGHHLL--DLDEAQ 478 (609)
Q Consensus 410 --~r~~~~~f~~~~~~~~---~~~~-~~~-~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~--p~~~~ll--~i~~~~ 478 (609)
....++++.+.. ... ..+. .+. .......++...+.+.|.+ .||.+++|..|.. |....+. ++. .
T Consensus 276 ~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~p~~~~~~~~~~~--~ 351 (394)
T 1o69_A 276 SRSNRWLSTALINF-DKNELNACQKDINISQKNITLHPKISKLIEDLKN-KQIETRPLWKAMHTQEVFKGAKAYLNG--N 351 (394)
T ss_dssp EECCCSSEEEEESC-CGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHH-TTCCCBCCCCCGGGCGGGTTCEEEECS--H
T ss_pred CcceeEEEEEEecc-hhhccccccccccccccccccccCHHHHHHHHHH-cCCcccccCCccccchhhhccCCCCCh--H
Confidence 111245565542 100 0000 000 0000001356788898866 6999999955421 2111100 111 1
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+..+ ....+|+++++++|++|+++++++|++++..+
T Consensus 352 ~~~~-----------~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~~ 387 (394)
T 1o69_A 352 SELF-----------FQKGICLPSGTAMSKDDVYEISKLILKSIKAG 387 (394)
T ss_dssp HHHH-----------HHHEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred HHHH-----------hcCeEEccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 1111 02456777799999999999999999987665
No 98
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.94 E-value=3.1e-26 Score=244.64 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=155.3
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.+.|.|+.+.....+.+.+++.. +.+.+.. +..+........++++++++++|.+ + .+++ ++|+ +++..+
T Consensus 26 ~~~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~-~-~i~~-~sG~-~a~~~~ 95 (398)
T 2rfv_A 26 ALSTPIFQTSTFVFDSAEQGAAR-----FALEESG-YIYTRLGNPTTDALEKKLAVLERGE-A-GLAT-ASGI-SAITTT 95 (398)
T ss_dssp CSSCCCCCCSBCCCSSHHHHHHH-----C-----C-CSBTTTCCHHHHHHHHHHHHHHTCS-E-EEEE-SSHH-HHHHHH
T ss_pred CcCCCCcCCCccccCCHHHHHHh-----hcCCCCC-CceeCCCChHHHHHHHHHHHHhCCC-c-EEEE-CCHH-HHHHHH
Confidence 45677888888777777776652 2233222 2233334567889999999999986 2 4544 4788 678887
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..+ +++|| .|+++..+|+++...+ +..|++++.++.+ |+++|+++++ +
T Consensus 96 l~~~---------------~~~gd--~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~ 148 (398)
T 2rfv_A 96 LLTL---------------CQQGD--HIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMR-----P 148 (398)
T ss_dssp HHHH---------------CCTTC--EEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCC-----T
T ss_pred HHHH---------------hCCCC--EEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcC-----C
Confidence 7765 36888 6999999999998877 6789999999875 8999999998 5
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILL 310 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~ 310 (609)
+++++++++++||||.+.|+++|+++|++||+++|+|++++.+...... .. +.|+++.|+||+++||++ .|+++
T Consensus 149 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~ 224 (398)
T 2rfv_A 149 ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL---GADIVVHSVTKYINGHGDVIGGIIV 224 (398)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCcEEEEeCcccccCCCCceEEEEE
Confidence 8999999999999999999999999999999999999999876543222 22 689999999999998876 59999
Q ss_pred Eechh
Q 038499 311 MTKAL 315 (609)
Q Consensus 311 ~~~~~ 315 (609)
+++++
T Consensus 225 ~~~~~ 229 (398)
T 2rfv_A 225 GKQEF 229 (398)
T ss_dssp ECHHH
T ss_pred ECHHH
Confidence 99887
No 99
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.94 E-value=2.4e-26 Score=242.80 Aligned_cols=348 Identities=10% Similarity=0.011 Sum_probs=230.5
Q ss_pred CccccCCCCCCceEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcE
Q 038499 66 NAEFDSPFGKRRLTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAM 142 (609)
Q Consensus 66 ~~~~~~p~g~~~~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~v 142 (609)
+.++.+..|+ +++.+..+.. .+.++.|.+++.+.+... .+. +.. .. .++++.+.+.+.+.+| .+++ +|
T Consensus 14 g~~~~d~~g~-~~idl~~~~~~~~~~~~v~~a~~~~~~~~---~~~--y~~-~~-~~lr~~la~~~~~~~~~~~~~~-~i 84 (377)
T 3fdb_A 14 NTMKWTRYGQ-GVLPLWVAESDFSTCPAVLQAITDAVQRE---AFG--YQP-DG-SLLSQATAEFYADRYGYQARPE-WI 84 (377)
T ss_dssp CCHHHHSSCT-TSEECCSSCCCSCCCHHHHHHHHHHHHTT---CCS--SCC-SS-CCHHHHHHHHHHHHHCCCCCGG-GE
T ss_pred CCceeeccCC-CeeeecccCCCCCCCHHHHHHHHHHHHcC---CCC--CCC-CC-HHHHHHHHHHHHHHhCCCCCHH-HE
Confidence 3444444554 5666665543 246788999998877541 010 111 11 2233333444444444 5555 89
Q ss_pred EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHH
Q 038499 143 IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALR 222 (609)
Q Consensus 143 ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~ 222 (609)
++| +|+++++..++..+ +++|| .|++..+.|+++...++..|++++.++.+.+ +|+++|+
T Consensus 85 ~~t-~g~~~a~~~~~~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~ 144 (377)
T 3fdb_A 85 FPI-PDVVRGLYIAIDHF---------------TPAQS--KVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVE 144 (377)
T ss_dssp EEE-SCHHHHHHHHHHHH---------------SCTTC--CEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHH
T ss_pred EEe-CChHHHHHHHHHHh---------------cCCCC--EEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHH
Confidence 998 78888899888876 37888 5889999999999889999999999999876 9999999
Q ss_pred HHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc-----ccccCCCCCCCCccEEEE
Q 038499 223 SKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY-----VEIDVRSGQTDGYDAIFL 294 (609)
Q Consensus 223 ~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~-----~~id~~~~~~~~~D~v~~ 294 (609)
++++ ++++++++++++||||.+.| +++|+++|++||+++|+|++++... ...++......+.++++.
T Consensus 145 ~~l~-----~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 219 (377)
T 3fdb_A 145 KGFQ-----AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITIT 219 (377)
T ss_dssp HHHH-----TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEE
T ss_pred HHhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEE
Confidence 9998 56899999999999999986 5667778999999999999987522 222332210113458889
Q ss_pred cCCCCCCCCC-CcEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 295 STHKFLGGPG-SPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 295 S~hK~lggp~-g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
|+||++|.|+ ++|++++ ++++. +.+... .. ....+++......+...+. .
T Consensus 220 s~sK~~g~~G~r~G~~~~~~~~~~--~~~~~~------------------------~~-~~~~~~~~~~~~a~~~~l~-~ 271 (377)
T 3fdb_A 220 APSKAWNIAGLKCAQIIFSNPSDA--EHWQQL------------------------SP-VIKDGASTLGLIAAEAAYR-Y 271 (377)
T ss_dssp CSTTTTTCGGGCCEEEECCSHHHH--HHHHHS------------------------CH-HHHCCCCHHHHHHHHHHHH-H
T ss_pred eChHhccCcchhheEEEeCCHHHH--HHHHHH------------------------HH-hhcCCCCHHHHHHHHHHHh-c
Confidence 9999997443 4898887 45552 221110 00 0112223333222111111 1
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 373 EYIGHEVIKKQEETYIERALERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
.....+.+.++.+++++++.+.|++ +|++++..+ ..+++.+...+ .. + .. .++.+.|.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~-~~------------~--~~-~~~~~~l~~ 331 (377)
T 3fdb_A 272 GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM----QATYLMWIDFR-DT------------T--IE-GSPSEFFIE 331 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC----SBCSEEEEECT-TS------------C--CC-SCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC----CeeEEEEEECc-cc------------C--CC-HHHHHHHHH
Confidence 1223567788888899999999987 789998765 23444433333 10 0 12 346666667
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++||.+++|..|..+ .++++|||++ .++++++.++++|++++++
T Consensus 332 ~~gi~v~~g~~~~~~---------------------------~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 332 KAKVAMNDGAWFGED---------------------------GTGFCRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp HHCEECEEGGGGCGG---------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred hCCEEecCChhccCC---------------------------CCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 679999999887632 1589999998 4899999999999988754
No 100
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=1.3e-25 Score=238.81 Aligned_cols=338 Identities=12% Similarity=-0.005 Sum_probs=224.8
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
+++.|+.+... +.++.|.+++.+.+.... . .|....+..++++.+.+.+.+.+| ++++ +|++| +|+++++
T Consensus 32 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~----~-~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~v~~t-~g~~~al 104 (391)
T 3h14_A 32 RIIHMEVGQPGTGAPRGAVEALAKSLETDA----L-GYTVALGLPALRQRIARLYGEWYGVDLDPG-RVVIT-PGSSGGF 104 (391)
T ss_dssp CCEECCCSSCSSCSCHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SSHHHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEe-cChHHHH
Confidence 45666655443 346678888888775310 0 011111123344444444444445 4555 89998 7788889
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhccC
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKDA 231 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~~ 231 (609)
..++..+ +++|| .|++..+.|+++...++..|++++.++.+++ ..+|+++|+++
T Consensus 105 ~~~~~~l---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~------- 160 (391)
T 3h14_A 105 LLAFTAL---------------FDSGD--RVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL------- 160 (391)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS-------
T ss_pred HHHHHHh---------------cCCCC--EEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc-------
Confidence 9888776 37888 6999999999999999999999999999864 36799988654
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCCCCCccEEEEcCCCCCCC-CC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQTDGYDAIFLSTHKFLGG-PG 304 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~~~~~D~v~~S~hK~lgg-p~ 304 (609)
+++++++++++||||.+.| +++|+++|++||+++|+|++++.... +..+... .+.++++.|++|++|. +.
T Consensus 161 -~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~ 237 (391)
T 3h14_A 161 -DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL--TDECYVINSFSKYFSMTGW 237 (391)
T ss_dssp -CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CSSSEEEEESSSTTCCTTS
T ss_pred -CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhc--CCCEEEEEechhccCCccc
Confidence 4789999999999999998 78899999999999999999875321 1222211 2457888899999973 34
Q ss_pred CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 038499 305 SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQE 384 (609)
Q Consensus 305 g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~ 384 (609)
++|++++++++. +.+... .+....+++......+...+. .....+.+.++.
T Consensus 238 r~G~~~~~~~~~--~~~~~~-------------------------~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~ 288 (391)
T 3h14_A 238 RVGWMVVPEDQV--RVVERI-------------------------AQNMFICAPHASQVAALAALD--CDAELQANLDVY 288 (391)
T ss_dssp CCEEEECCGGGH--HHHHHH-------------------------HHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred eeEEEEeCHHHH--HHHHHH-------------------------HhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHH
Confidence 589999988872 222110 111122333333221111111 223456777888
Q ss_pred HHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC
Q 038499 385 ETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA 464 (609)
Q Consensus 385 ~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca 464 (609)
+++++++.+.|++++...+..+ ..+.+.+...+ .. ..+...+++.|.+++||.+++|..|.
T Consensus 289 ~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~gi~v~~g~~~~ 349 (391)
T 3h14_A 289 KANRKLMLERLPKAGFTRIAPP----DGAFYVYADVS-DL--------------TDDSRAFAAEILEKAGVAVTPGLDFD 349 (391)
T ss_dssp HHHHHHHHHHHHHHTCCCBCCC----CBTTEEEEECT-TT--------------CSCHHHHHHHHHHHHCEECEEGGGTC
T ss_pred HHHHHHHHHHHHHcCCCcccCC----CeeEEEEEecC-cc--------------CCCHHHHHHHHHHHCCEEEcCchhhC
Confidence 8888999998887633222222 23444444333 10 13577888887776799999998887
Q ss_pred ChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 465 GPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 465 ~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+. .++++||+++. ++++++.++++|++++++
T Consensus 350 ~~~--------------------------~~~~iRis~~~--~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 350 PER--------------------------GAGTLRFSYAR--ATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp TTT--------------------------GGGEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred CCC--------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 321 14899999985 889999999999998875
No 101
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=2.4e-26 Score=242.64 Aligned_cols=350 Identities=12% Similarity=0.027 Sum_probs=232.3
Q ss_pred ecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHh
Q 038499 81 ADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVM 160 (609)
Q Consensus 81 ld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l 160 (609)
+|...+.+....+.+++.+.+... . +. ......++++.+++++|.+ +++++++|+. ++..++..+
T Consensus 9 ~~l~~~~~~~~~~~~~~~~~~~~~----~---~~----~~~~~~~l~~~la~~~~~~---~~~~~~~gt~-a~~~~~~~~ 73 (374)
T 3uwc_A 9 SYLERQFADIEPYLNDLREFIKTA----D---FT----LGAELEKFEKRFAALHNAP---HAIGVGTGTD-ALAMSFKML 73 (374)
T ss_dssp CCHHHHTSSCHHHHHHHHHHHHHT----C---CS----SCHHHHHHHHHHHHHTTCS---EEEEESCHHH-HHHHHHHHT
T ss_pred eccccCCCCchHHHHHHHHHHHcC----C---cc----cChhHHHHHHHHHHHhCCC---cEEEeCCHHH-HHHHHHHHc
Confidence 333333333333777777655421 1 11 1234678999999999986 5788867755 677777766
Q ss_pred cccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEe
Q 038499 161 GIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFS 240 (609)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s 240 (609)
+ +++|| .|+++.++|+++...++..|++++.++.+.++.+|+++|+++++ +++++++
T Consensus 74 ~--------------~~~gd--~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~-- 130 (374)
T 3uwc_A 74 N--------------IGAGD--EVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-----DKTKAIM-- 130 (374)
T ss_dssp T--------------CCTTC--EEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-----TTEEEEC--
T ss_pred C--------------CCCCC--EEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-----CCceEEE--
Confidence 3 36888 69999999999999999999999999998888899999999987 5788766
Q ss_pred cccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEechhhcc
Q 038499 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTKALYQL 318 (609)
Q Consensus 241 ~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~~~~~l 318 (609)
++||||.+.|+++|.++|++||+++|+|++++.+.. ++..... ...|++++|+| |++++++..|+++.+++.. .
T Consensus 131 -~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~-~~~~~~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~-~ 206 (374)
T 3uwc_A 131 -PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGR-INDKFVG-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEY-A 206 (374)
T ss_dssp -CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETT-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHH-H
T ss_pred -EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCce-eCCeecc-ccccEEEEeCCCCCcCCccceeEEEEeCCHHH-H
Confidence 889999999999999999999999999999987654 3333321 12599999977 9998745468888776431 1
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCC-hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT-PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt-p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+.+.+...++....+ . . ...+. ..+.. +.+++.+. ...+.+.+.++.+++.+++.+.|++
T Consensus 207 ~~~~~~~~~~~~~~~-----------~----~-~~~~~~~~~~~-~~aa~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~ 267 (374)
T 3uwc_A 207 EKLRLYRNHGLINRD-----------V----C-VEYGINCRMDT-IQAVIANR--LMNQLETITEKRRGIAHLYDQSFVD 267 (374)
T ss_dssp HHHHHHTBTTEEETT-----------E----E-SSCCCBCBCCH-HHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHhcCccccC-----------c----c-ccccccCCCCH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222222222211000 0 0 00111 11111 22232322 3446778888999999999999999
Q ss_pred CCc-eEEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc----ccCChhhhhh
Q 038499 398 NQN-IKILGNTSTKRQAI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC----ACAGPYGHHL 471 (609)
Q Consensus 398 ~p~-i~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~----~ca~p~~~~l 471 (609)
+++ +++..... .+.+. +.|.+.. .+...+.+.|.+ .||.+++|. .|.+++..
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~l~~~L~~-~gi~v~~~~~~~~~~~~~~~~-- 325 (374)
T 3uwc_A 268 LSEFIDVPVRRE-GVYHVFHIYVLRV------------------KYRDQLFQYLKD-NGIEVKIHYPIAMHLQPAAKS-- 325 (374)
T ss_dssp GTTTEECCCCCT-TEECCCSSEEEEE------------------TTHHHHHHHHHH-TTBCCBCSCSSCGGGSGGGGG--
T ss_pred CCCeEEeccCCC-CCceeeEEEEEEc------------------CCHHHHHHHHHH-CCCccccCCCCccccChhhhh--
Confidence 887 87754321 12222 2333333 146788888866 599999885 33222211
Q ss_pred cCC---ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 472 LDL---DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 472 l~i---~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++. ..+.+..+ ..+.+||+++.++|++|+++++++|++++++
T Consensus 326 ~~~~~~~~~~~~~~-----------~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 326 LGYQQGDFPMAEKH-----------GEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp GCCCTTSCHHHHHH-----------HHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCccCCCccHHHH-----------HhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 111 01111111 1378999999999999999999999999875
No 102
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=1.1e-25 Score=241.78 Aligned_cols=373 Identities=11% Similarity=0.039 Sum_probs=234.1
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
+.++.+.+++.+.+... +.+......| ..++.+++++.+++++|.+ +++++++|+ +++..++..++
T Consensus 13 ~~~~~~~~a~~~~~~~~--~~~~~~~~~g--~~~l~~~l~~~la~~~g~~---~~i~~~~gt-~al~~~~~~~~------ 78 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSN--RWAISGYWTG--EESMERKFAKAFADFNGVP---YCVPTTSGS-TALMLALEALG------ 78 (418)
T ss_dssp CCCHHHHHHHHHHHHHT--CCSTTSBCCS--SCCHHHHHHHHHHHHHTCS---EEEEESCHH-HHHHHHHHHTT------
T ss_pred CCCHHHHHHHHHHHhcC--CccccCcccC--CHHHHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHcC------
Confidence 45678888888877542 2211101112 2456788999999999986 456676775 67888887763
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCcc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVT 246 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T 246 (609)
+++|| .|+++.++|+++...++..|++++.+++++ ++.+|+++|+++++ +++++|+++ |+|
T Consensus 79 --------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~---~~~ 140 (418)
T 2c81_A 79 --------IGEGD--EVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-----DKTKAIIPV---HLF 140 (418)
T ss_dssp --------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-----TTEEEECCB---CCT
T ss_pred --------CCCcC--EEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-----CCCeEEEEe---CCc
Confidence 36888 699999999999999999999999999986 78899999999997 578887754 589
Q ss_pred ccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCC-CCCccEEEEcCCCCCCCCCCcEEEEEe-chhhccCCCCCC
Q 038499 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ-TDGYDAIFLSTHKFLGGPGSPGILLMT-KALYQLGSFPPS 324 (609)
Q Consensus 247 G~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~-~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~~l~~~~p~ 324 (609)
|...|+++|.++|++||+++|+|++++.+.. .+..... ...+++.++|+||++|+ +..|+++.+ +++ ++.+.+.
T Consensus 141 G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~s~s~~K~~~~-g~~g~~~~~~~~l--~~~~~~~ 216 (418)
T 2c81_A 141 GSMANMDEINEIAQEHNLFVIEDCAQSHGSV-WNNQRAGTIGDIGAFSCQQGKVLTA-GEGGIIVTKNPRL--FELIQQL 216 (418)
T ss_dssp TCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCS-SSCEEEEESCHHH--HHHHHHH
T ss_pred CCcccHHHHHHHHHHCCCEEEEECcccccCc-cCCEecccccceEEEeccCCcccCC-CCeEEEEECCHHH--HHHHHHH
Confidence 9999999999999999999999999998753 2211111 11234444455999986 467888885 455 2223222
Q ss_pred ccCCCceEeecccccc-cccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 038499 325 TCGGGTVNYVNGFNEK-DTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKI 403 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~-~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v 403 (609)
..++..... +... ...|.+........|....+..+.+++... ...+.+.+.++.+++++++.+.|.++|++++
T Consensus 217 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 291 (418)
T 2c81_A 217 RADSRVYCD---DSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIKV 291 (418)
T ss_dssp HBTTEEECS---CGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHhCccccc---cccccccchhhccccccccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 222221000 0000 000100000000011100001112222221 2335677888888899999999999999998
Q ss_pred eCCCCC--CCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE---eccCcccCChh-hhhhcCC--
Q 038499 404 LGNTST--KRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ---ARGGCACAGPY-GHHLLDL-- 474 (609)
Q Consensus 404 ~~~~~~--~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~---v~~G~~ca~p~-~~~ll~i-- 474 (609)
..+... ... .++.+.+.. .. ....+...+.+.|.+++||. ++.|+.|.... .+.-++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~ 358 (418)
T 2c81_A 292 MKRPPQVSRQTYYGYVFRFDP-VK------------FGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNR 358 (418)
T ss_dssp CCCCTTEEECCCSEEEEEECG-GG------------TTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTT
T ss_pred CCCCCCCcccccEEEEEEEcc-cc------------ccccCHHHHHHHHHHcCCCCcccccccccccccCchhccccccc
Confidence 854321 112 234444431 00 00146788999997766999 99887443100 0000000
Q ss_pred ---------------ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC-CHHHHHHHHHHHHHHHHhc
Q 038499 475 ---------------DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM-SNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 475 ---------------~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~-t~eeid~ll~al~~v~~~~ 525 (609)
..+.++.+ ..+.+||+++.++ |++|+++++++|++++++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 359 YLKSVRKTEAYWRGLHYPVSERA-----------SGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp SCHHHHCCHHHHHTCCCHHHHHH-----------HHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccCCChHHHHH-----------HhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 11111111 1379999999999 9999999999999988753
No 103
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=9.1e-26 Score=241.14 Aligned_cols=341 Identities=14% Similarity=0.163 Sum_probs=212.5
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
+.-.|+.+++...+.+.+++. .++|+... +..++.......++++.+++++|.+ + .+++ ++|+ +++..++
T Consensus 28 ~~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~r~~~~~~~~l~~~la~~~g~~-~-~i~~-~sG~-~a~~~~l 97 (398)
T 1gc0_A 28 LVPPVYQTATFTFPTVEYGAA-----CFAGEQAG-HFYSRISNPTLNLLEARMASLEGGE-A-GLAL-ASGM-GAITSTL 97 (398)
T ss_dssp SSCCBCCCSCBCCC---------------------------CCHHHHHHHHHHHHHHTCS-E-EEEE-SSHH-HHHHHHH
T ss_pred cCCCccCCCccccCCHHHHHH-----hhcCCcCC-CcccCCCChHHHHHHHHHHHHhCCC-c-EEEE-CCHH-HHHHHHH
Confidence 334567777776666655553 13444332 3334445567889999999999986 2 4555 4886 6788887
Q ss_pred HHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCC
Q 038499 158 EVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~ 233 (609)
..+ +++|| .|+++..+|+++...+ +..|++++.++.+ |+++|+++++ ++
T Consensus 98 ~~~---------------~~~gd--~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~-----~~ 150 (398)
T 1gc0_A 98 WTL---------------LRPGD--EVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMT-----PA 150 (398)
T ss_dssp HHH---------------CCTTC--EEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCC-----TT
T ss_pred HHH---------------hcCCC--EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-----CC
Confidence 765 36788 6999999999988877 5579999999864 8999999998 58
Q ss_pred ceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEE
Q 038499 234 PILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLM 311 (609)
Q Consensus 234 ~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~ 311 (609)
++++++++++||||.+.|+++|+++|++||+++|+|++++.+.....+. .++|+++.|+||++|||++ .|++++
T Consensus 151 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~----~~~d~~~~S~sK~~~~~~~~~~G~l~~ 226 (398)
T 1gc0_A 151 TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLE----LGADLVVHSATKYLSGHGDITAGIVVG 226 (398)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGG----GTCSEEEEETTTTTTCSSSCCCEEEEE
T ss_pred CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchh----hCceEEEECCccccCCCCCCeEEEEEE
Confidence 9999999999999999999999999999999999999998765433332 2689999999999998876 599999
Q ss_pred echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 038499 312 TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERA 391 (609)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~ 391 (609)
+++... ..+.+.. .....++.+...... ++..+ ...+...++..+.++++
T Consensus 227 ~~~~~~-~~~~~~~------------------------~~~~~~~~~~~~~~~-~~~~l----~~~~~~~~~~~~~~~~l 276 (398)
T 1gc0_A 227 SQALVD-RIRLQGL------------------------KDMTGAVLSPHDAAL-LMRGI----KTLNLRMDRHCANAQVL 276 (398)
T ss_dssp CHHHHH-HHHHTHH------------------------HHHTCCCCCHHHHHH-HHHHH----TTHHHHHHHHHHHHHHH
T ss_pred ChHHHH-HHHHHHh------------------------hccCCCCCCHHHHHH-HHhcc----chHHHHHHHHHHHHHHH
Confidence 887621 0111110 000123333222211 11111 12334445555666666
Q ss_pred HHHhCCCCceE--------------EeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEe
Q 038499 392 LERLLPNQNIK--------------ILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 392 ~~~L~~~p~i~--------------v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v 457 (609)
.+.|.+++++. ++++......++++|.+.. ....+.+.| +..+|.+
T Consensus 277 ~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------~~~~~~~~l-~~~~i~~ 336 (398)
T 1gc0_A 277 AEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-------------------GIGAGRRFM-NALQLFS 336 (398)
T ss_dssp HHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-------------------HHHHHHHHH-HHCSSSE
T ss_pred HHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-------------------CHHHHHHHH-HhCCCce
Confidence 66666655443 3322111256778886654 134455656 4468877
Q ss_pred cc---Ccc------cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 458 RG---GCA------CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 458 ~~---G~~------ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+. |+. |+.. .|. .+....-. ..|+.+++||||++..+++++++.+.++|+++
T Consensus 337 ~~~s~G~~~sl~~~~~~~-~~~--~~~~~~~~---------~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 337 RAVSLGDAESLAQHPASM-THS--SYTPEERA---------HYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp ECSCCSCSSCEEECGGGT-TTS--SSCHHHHH---------HTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eccCCCCcceeeeccccc-ccc--cCCHHHHH---------hcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 65 532 3210 110 11100000 12344699999999999999999999999875
No 104
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.2e-25 Score=238.89 Aligned_cols=346 Identities=14% Similarity=0.075 Sum_probs=228.3
Q ss_pred hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHH
Q 038499 90 LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILR 169 (609)
Q Consensus 90 ~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (609)
.+.+.+++.+.+... +.. +.. .....++++.+++++|.+ ++|+++ +| +++++.++..++
T Consensus 16 ~~~~~~a~~~~l~~~--~~~---~~~----~~~~~~l~~~la~~~~~~--~~i~~~-sG-t~al~~~l~~l~-------- 74 (388)
T 1b9h_A 16 DDAERNGLVRALEQG--QWW---RMG----GDEVNSFEREFAAHHGAA--HALAVT-NG-THALELALQVMG-------- 74 (388)
T ss_dssp CHHHHHHHHHHHHTS--CCB---TTT----CSHHHHHHHHHHHHTTCS--EEEEES-CH-HHHHHHHHHHTT--------
T ss_pred CHHHHHHHHHHHHcC--Cee---ecC----CHHHHHHHHHHHHHhCCC--eEEEeC-CH-HHHHHHHHHHcC--------
Confidence 377888888877531 111 111 234678999999999986 356665 88 578888888763
Q ss_pred HHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCcccc
Q 038499 170 EKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGI 248 (609)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~ 248 (609)
+++|| .|+++.++|+++...++..|++++.+++++ ++.+|+++|+++++ +++++|+ ++|+||.
T Consensus 75 ------~~~gd--~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~~~v~---~~n~tG~ 138 (388)
T 1b9h_A 75 ------VGPGT--EVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-----PRTKVIM---PVHMAGL 138 (388)
T ss_dssp ------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-----TTEEEEC---CBCGGGC
T ss_pred ------CCCcC--EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-----cCceEEE---EeCCccC
Confidence 36888 699999999999999999999999999987 47899999999997 5788766 8899999
Q ss_pred ccCHHHHHHHHHHhCCeEEEeccccCCccc--ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhh-ccCCCCCCc
Q 038499 249 YSDTRSIARLLHQYGGFACFDFAASGPYVE--IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALY-QLGSFPPST 325 (609)
Q Consensus 249 ~~dl~~I~~la~~~g~~vivD~A~~~~~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~-~l~~~~p~~ 325 (609)
+.|+++|.++|++||+++|+|++++.+... .++..+ ..+++.++|.||+++|+. .|+++++++.. .++.+...
T Consensus 139 ~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~--~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~- 214 (388)
T 1b9h_A 139 MADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGEL--DSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLR- 214 (388)
T ss_dssp CCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGS--SSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHH-
T ss_pred cCCHHHHHHHHHHcCCEEEEecchhcCCccCCeecccc--cceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHH-
Confidence 999999999999999999999999876544 333332 125666667889998765 59999887631 00111111
Q ss_pred cCCCceEeecccccccccccccccccccCCC---hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE
Q 038499 326 CGGGTVNYVNGFNEKDTLYLEDIEERESGGT---PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK 402 (609)
Q Consensus 326 ~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt---p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~ 402 (609)
.+++. ......| .....|+ .+..+. +++. .....++...++.+++++++.+.|+++|+++
T Consensus 215 ~~~~~-------~~~~~~~-----~~~~~g~~~~~~~~~~--a~~~---~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 277 (388)
T 1b9h_A 215 HSCGR-------PRDDRRY-----FHKIAGSNMRLNEFSA--SVLR---AQLARLDEQIAVRDERWTLLSRLLGAIDGVV 277 (388)
T ss_dssp TBTTC-------CTTCSSC-----CCCSCCCBCBCBHHHH--HHHH---HHHTTHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred HhCCC-------CccCccc-----eeecccccCCcCHHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 11111 0000000 0012233 232222 1111 1122456677777888999999999999998
Q ss_pred EeCCCCC--CC-cceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh-----cCC
Q 038499 403 ILGNTST--KR-QAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL-----LDL 474 (609)
Q Consensus 403 v~~~~~~--~r-~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l-----l~i 474 (609)
+..+... +. ..++++.+.. .. ..+...+.+.|.+ .||.++.+.... |.+ ++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~l~~~L~~-~gI~v~~~~~~~----~~~~~~~~~~~ 337 (388)
T 1b9h_A 278 PQGGDVRADRNSHYMAMFRIPG-LT--------------EERRNALVDRLVE-AGLPAFAAFRAI----YRTDAFWELGA 337 (388)
T ss_dssp ECCCCTTCCBCCCSEEEEECTT-CC--------------HHHHHHHHHHHHH-TTCCEEECCCCG----GGSHHHHHSSC
T ss_pred ccCCCcCCCccceEEEEEEeCC-cC--------------cccHHHHHHHHHH-CCCCcccccCcc----ccChHhHhcCC
Confidence 8764221 12 2345554432 10 0135678888866 599998764321 111 111
Q ss_pred Ch----------hHHHHHHHHHhhCCCCCCCcEEEEecCCCC-CHHHHHHHHHHHHHHHHh
Q 038499 475 DE----------AQSYQIRSAIQKGYVGVKPGWTRISFPYYM-SNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 475 ~~----------~~~~~~~~~~~~~~~~~~~g~iRls~~~~~-t~eeid~ll~al~~v~~~ 524 (609)
.. +.+..+ ..+.+||+++..+ |++|+++++++|++++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~-----------~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 338 PDESVDAIARRCPNTDAI-----------SSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp CSSCHHHHHHTCHHHHHH-----------HHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccCCHHHHHH-----------HhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 10 111111 1368999999999 999999999999998764
No 105
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.94 E-value=2.8e-26 Score=245.47 Aligned_cols=338 Identities=12% Similarity=0.020 Sum_probs=228.2
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCC--CCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGG--QEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~--~~~~vift~sGt 149 (609)
.++.|+.+... ..++.+.+++.+.+... ..+. |..... ..++++.+++++ |.+ ++++|++| +|+
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~--~~~~--y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~~v~~t-~G~ 118 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIP--ENQK--YGAFHG----KEAFKQAIVDFYQRQYNVTLDKEDEVCIL-YGT 118 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCH--HHHS--CCCTTC----CHHHHHHHHHHHHHHHCCCCCTTTSEEEE-SSH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCC--CCCC--CCCCCC----CHHHHHHHHHHHHHHhCCCCCCcccEEEc-CCc
Confidence 45666655443 24677888888776431 0000 111011 234555555555 875 22389998 788
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELY 228 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~ 228 (609)
++++..++.++ +++|| .|++..+.|+++...++..|++++.++.+++ ..+|+++|+++++
T Consensus 119 ~~al~~~~~~l---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-- 179 (404)
T 2o1b_A 119 KNGLVAVPTCV---------------INPGD--YVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-- 179 (404)
T ss_dssp HHHHHHHHHHH---------------CCTTC--EEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH--
T ss_pred HHHHHHHHHHh---------------cCCCC--EEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc--
Confidence 88899888876 36788 6899999999999889999999999998863 3589999999997
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCCC-CCCccEEEEcCCCCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSGQ-TDGYDAIFLSTHKFLG 301 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~~-~~~~D~v~~S~hK~lg 301 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++.... +.++.... ..+.|+++.|+||++|
T Consensus 180 ---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g 256 (404)
T 2o1b_A 180 ---DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYN 256 (404)
T ss_dssp ---HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTT
T ss_pred ---cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhcc
Confidence 46899999999999999986 67899999999999999999876432 22222221 1145789999999997
Q ss_pred CCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHH
Q 038499 302 GPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEV 379 (609)
Q Consensus 302 gp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~ 379 (609)
.|+ ++|++++++++ ++.+... ......+++..... ++.+++ .. ....+.
T Consensus 257 ~~G~r~G~~~~~~~~--~~~l~~~-------------------------~~~~~~~~~~~~~~-a~~~~l-~~~~~~~~~ 307 (404)
T 2o1b_A 257 MSGFRVGFAVGNKDM--IQALKKY-------------------------QTHTNAGMFGALQD-AAIYAL-NHYDDFLEE 307 (404)
T ss_dssp CGGGCCEEEEECHHH--HHHHHHH-------------------------HHHHCCCCCHHHHH-HHHHHH-HHCHHHHHH
T ss_pred CchhheEeEecCHHH--HHHHHHH-------------------------HhhccCCCCHHHHH-HHHHHH-hcCHHHHHH
Confidence 443 47999998887 2222111 00011222222221 122222 12 234567
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
++++.+++++++.+.|+++ ++++..+ ..+++.+...+ .. .+...+.+.|.++.||.+++
T Consensus 308 ~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~-~~---------------~~~~~l~~~l~~~~gi~v~~ 366 (404)
T 2o1b_A 308 QSNVFKTRRDRFEAMLAKA-DLPFVHA----KGGIYVWLETP-PG---------------YDSEQFEQFLVQEKSILVAP 366 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCEECC----CBSSEEEEECC-TT---------------CCHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHHHHHHHHhc-CCeecCC----CcceEEEEeCC-CC---------------CCHHHHHHHHHHHCCEEEeC
Confidence 7778888899999999877 7777654 33554443333 11 35678888876667999999
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|..|... .++++||+++. ++++++.++++|+++++.
T Consensus 367 g~~f~~~---------------------------~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 367 GKPFGEN---------------------------GNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp SGGGCGG---------------------------GTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred chhhCcC---------------------------CCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 8776521 14899999985 788999999999877643
No 106
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.94 E-value=2.6e-26 Score=238.51 Aligned_cols=299 Identities=12% Similarity=0.063 Sum_probs=197.2
Q ss_pred HHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----H
Q 038499 125 EASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----Q 200 (609)
Q Consensus 125 e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~ 200 (609)
++++.+++++|++ + .++++ +| ++++..++..+ +++|| .|+++.++|+++...+. .
T Consensus 2 ~l~~~la~~~g~~-~-~i~~~-sG-~~a~~~~~~~~---------------~~~g~--~v~~~~~~~~~~~~~~~~~~~~ 60 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A-CAATA-SG-MGAIAASVWTF---------------LKAGD--HLISDDCLYGCTHALFEHQLRK 60 (331)
T ss_dssp HHHHHHHHHHTCS-E-EEEES-SH-HHHHHHHHHHH---------------CCTTC--EEEEESCCCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHhCCC-e-EEEeC-Ch-HHHHHHHHHHh---------------cCCCC--EEEEcCCCcchHHHHHHHHHHh
Confidence 5789999999986 3 56665 88 57888887765 36888 69999999999887764 4
Q ss_pred cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH-hCCeEEEeccccCCcccc
Q 038499 201 SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAASGPYVEI 279 (609)
Q Consensus 201 ~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~-~g~~vivD~A~~~~~~~i 279 (609)
.|++++.++. .|+++|+++++ ++++++++++++||||.+.|+++|.++|++ ||+++|+|++++.+....
T Consensus 61 ~g~~~~~~~~-----~d~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~ 130 (331)
T 1pff_A 61 FGVEVDFIDM-----AVPGNIEKHLK-----PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN 130 (331)
T ss_dssp TTCEEEEECT-----TSTTHHHHTCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC
T ss_pred cCCEEEEeCC-----CCHHHHHHhhc-----CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC
Confidence 7999999986 47889999887 579999999999999999999999999999 999999999998765433
Q ss_pred cCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec-hhhccCCCCCCccC-CCceEeecccccccccccccccccccCC
Q 038499 280 DVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK-ALYQLGSFPPSTCG-GGTVNYVNGFNEKDTLYLEDIEERESGG 355 (609)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~-~~~~l~~~~p~~~g-gg~v~~~~~~~~~~~~~~~~~~~r~~~g 355 (609)
++. .+.|++++|+||++|+|++ .|++++++ ++ ++.+.+...+ + .+
T Consensus 131 ~~~----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~--~~~l~~~~~~~~-------------------------~~ 179 (331)
T 1pff_A 131 PLD----LGVDIVVHSATKYINGHTDVVAGLVCSRADII--AKVKSQGIKDIT-------------------------GA 179 (331)
T ss_dssp GGG----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHH--HHHHHTCCCCCC-------------------------CC
T ss_pred hhh----cCCcEEEEECccccCCCCCceEEEEEeCcHHH--HHHHHHHHHhhc-------------------------CC
Confidence 332 2689999999999999887 79999998 76 2333222221 1 11
Q ss_pred ChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH----------hCCCCceEEeCCCCCCCcceEEEEeccCC
Q 038499 356 TPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALER----------LLPNQNIKILGNTSTKRQAILSFNIHSST 423 (609)
Q Consensus 356 tp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~----------L~~~p~i~v~~~~~~~r~~~~~f~~~~~~ 423 (609)
+.+..... ..++... ....+...+....+.+++.+. |.++|+++++.+....+.++++|.+..
T Consensus 180 ~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (331)
T 1pff_A 180 IISPHDAWLITRGTLTL---DMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG-- 254 (331)
T ss_dssp CCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS--
T ss_pred CCCHHHHHHHHcCcchH---HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--
Confidence 22222211 1222211 001122223333333333322 233344444432111245667666542
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC---------cccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG---------CACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G---------~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
...+.+.|.+ .||.++.. ++|+.+. +.. +....-. ..|+.
T Consensus 255 ------------------~~~~~~~l~~-~gI~~~~~s~g~~~sl~~~~~~~~-~~~--~~~~~~~---------~~g~~ 303 (331)
T 1pff_A 255 ------------------LEKAKKVLDN-CHVVSLAVSLGGPESLIQHPASMT-HAG--VPKEERE---------AAGLT 303 (331)
T ss_dssp ------------------HHHHHHHHHT-CSSSEECSSCCSSSCEEECHHHHT-STT--SCHHHHH---------HTTCC
T ss_pred ------------------HHHHHHHHHh-CCCceeccCCCCcceeeecchhhc-ccc--cCHHHHH---------hcCCC
Confidence 4577777754 69977654 4555321 110 1100000 12334
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
++++|||++.+++++++++++++|+.+
T Consensus 304 ~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 304 DNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999753
No 107
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.94 E-value=1.6e-25 Score=238.62 Aligned_cols=341 Identities=12% Similarity=0.072 Sum_probs=226.1
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCC-CCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTH-TCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~-~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaa 152 (609)
.++.|..+... +.++.+.+++.+.+... ++. ...|....+..++++.+.+++.+.+| .+++ +|++| +|++++
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~~-~g~~~a 111 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKELVTDY--DSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD-NLYMT-MGAAAS 111 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHHHHHHS--CHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SSHHHH
T ss_pred CeEEeecCCCCCCCCHHHHHHHHHHHhcC--CccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH-HEEEc-cCHHHH
Confidence 45555544332 45678888888877541 100 00011111224556666666666666 4554 89998 788888
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhcc
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~ 230 (609)
+..++..+ +++| | .|++..+.|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 112 l~~~~~~l---------------~~~g~d--~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~---- 170 (398)
T 3ele_A 112 LSICFRAL---------------TSDAYD--EFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN---- 170 (398)
T ss_dssp HHHHHHHH---------------CCSTTC--EEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC----
T ss_pred HHHHHHHH---------------cCCCCC--EEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC----
Confidence 99888876 3788 8 689999999999989999999999999986 45899999999997
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHH------hCCeEEEeccccCCccc---ccCCCCCCCCccEEEEcCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQ------YGGFACFDFAASGPYVE---IDVRSGQTDGYDAIFLSTHK 298 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~------~g~~vivD~A~~~~~~~---id~~~~~~~~~D~v~~S~hK 298 (609)
++++++++++++||||.+.| +++|+++|++ ||+++|+|++++..... +... ....+.++++.|+||
T Consensus 171 -~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK 248 (398)
T 3ele_A 171 -AHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNTLVCYSYSK 248 (398)
T ss_dssp -TTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG-GGTCSSEEEEEESTT
T ss_pred -cCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh-HhhcCCeEEEEehhh
Confidence 57999999999999999998 5667789999 99999999998753211 1110 011245788999999
Q ss_pred CCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh-HHHHHHHHHHHHHHHhcC
Q 038499 299 FLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ-VIQMIRAALAFWVKEYIG 376 (609)
Q Consensus 299 ~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~-i~~~~~aal~~~~~~~~g 376 (609)
++|.| .++|++++++++ +... ... ..+..........+++ +.+.+ +.. .+.+ ..
T Consensus 249 ~~~~~G~r~G~~~~~~~~--~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~a--~~~-~l~~-~~ 304 (398)
T 3ele_A 249 SLSLPGERIGYVLVPDEV--YDKA-ELY-----------------AAVCGAGRALGYVCAPSLFQKM--IVK-CQGA-TG 304 (398)
T ss_dssp TSSCTTTCCEEEECCTTS--TTHH-HHH-----------------HHHHHHHHHTTCCCSCHHHHHH--HTT-CTTC-CC
T ss_pred cCCCccceeEEEEEcchh--hhHH-HHH-----------------HHHHHHhhhccccCCCHHHHHH--HHH-HhcC-HH
Confidence 99833 458999998876 2110 000 0000000111111222 22221 111 1111 11
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcE
Q 038499 377 HEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQ 456 (609)
Q Consensus 377 ~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~ 456 (609)
..++.++.++++.+.|+++ ++++..+ ..+++.+...+ . .+...+.+.|.+ .||.
T Consensus 305 ---~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~l~~-~gi~ 358 (398)
T 3ele_A 305 ---DINAYKENRDLLYEGLTRI-GYHCFKP----DGAFYMFVKAL-E----------------DDSNAFCEKAKE-EDVL 358 (398)
T ss_dssp ---CHHHHHHHHHHHHHHHHHH-TCCEECC----SBSSEEEEECS-S----------------SCHHHHHHHHHT-TTEE
T ss_pred ---HHHHHHHHHHHHHHHHHHc-CCeecCC----CeeEEEEEEcC-C----------------CCHHHHHHHHHH-CCEE
Confidence 3456666777777777765 6777655 33554444333 1 256788888855 6999
Q ss_pred eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 457 ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 457 v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+++|..|.. ++++||+++ +++++++.++++|+++++..
T Consensus 359 v~~g~~~~~-----------------------------~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 359 IVAADGFGC-----------------------------PGWVRISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp CEESGGGTC-----------------------------TTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccCC-----------------------------CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 998877651 489999997 69999999999999988764
No 108
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.94 E-value=4.1e-26 Score=243.58 Aligned_cols=339 Identities=16% Similarity=0.112 Sum_probs=228.4
Q ss_pred CCChHHHHHHHHHhhcCC--ccCCCCCCchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPF--YGNTHTCDSYVGQHTT-NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~--~~n~~~~~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
++.++.|.+++.+.+... .++++.. +..|.... .....+++++++++|.+++ +|++ ++|+. ++..++.++
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~y~~~~-~~~g~~~~~~~e~~ar~~la~~~g~~~~-~i~~-~sGt~-a~~~~~~~~--- 105 (407)
T 2dkj_A 33 NFVSKQVREAVGSVLTNKYAEGYPGAR-YYGGCEVIDRVESLAIERAKALFGAAWA-NVQP-HSGSQ-ANMAVYMAL--- 105 (407)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEE-SSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCC-SSHHH-HHHHHHHHH---
T ss_pred CCCCHHHHHHHHhhhhcCcccCCCccc-ccCCchHHHHHHHHHHHHHHHHhCCCcc-eEEe-cchHH-HHHHHHHHh---
Confidence 445888999998877531 2333221 11122222 3333477899999998753 4444 48887 788887776
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchH---HHHHHcCce--EEEEecCC-CCCCCHHHHHHHHhhhccCCCceEE
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNL---LSWRQSLAE--VVEIGLDD-DGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~---~~~~~~G~~--vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+++|| .|+++.++|+++. ..++..|++ ++.+++++ ++.+|+++|++++++ .+++++
T Consensus 106 ------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~~v 167 (407)
T 2dkj_A 106 ------------MEPGD--TLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE----HRPKVI 167 (407)
T ss_dssp ------------CCTTC--EEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH----HCCSEE
T ss_pred ------------cCCCC--EEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh----cCCeEE
Confidence 36888 6999999998884 344455664 44444343 678999999999984 378888
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe-chhh
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT-KALY 316 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~ 316 (609)
++++++|+ .+.|+++|.++|++||+++|+|++++.|....+.........|++++|+||+++|+.+ |+++++ +++.
T Consensus 168 ~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~ 244 (407)
T 2dkj_A 168 VAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELG 244 (407)
T ss_dssp EECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHH
T ss_pred EEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHH
Confidence 88888886 7789999999999999999999998875443332211112479999999999998886 999999 5762
Q ss_pred ccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 317 QLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+.+.+.. .....++++..+. +.+++... ...+.+.+.++.+++++++.+.
T Consensus 245 --~~l~~~~------------------------~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~ 296 (407)
T 2dkj_A 245 --KRIDKLI------------------------FPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLAEE 296 (407)
T ss_dssp --HHHHHHH------------------------TTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHhhh------------------------cccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHH
Confidence 2221110 0112344444333 23344332 2345688889999999999999
Q ss_pred hCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCC
Q 038499 395 LLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDL 474 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i 474 (609)
|+++ +++++.+. ...+++++.+.. .. .+...+.+.|.+ .||.+++|..+.. .. ..
T Consensus 297 L~~~-g~~~~~~~--~~~~~~~~~~~~-~~---------------~~~~~~~~~l~~-~gi~v~~~~~~~~----~~-~~ 351 (407)
T 2dkj_A 297 LARR-GYRIVTGG--TDNHLFLVDLRP-KG---------------LTGKEAEERLDA-VGITVNKNAIPFD----PK-PP 351 (407)
T ss_dssp HHHT-TCEEGGGS--CSSSEEEEECGG-GT---------------CCHHHHHHHHHH-TTEECEECCCTTC----SS-CT
T ss_pred HHhC-CceeecCC--CCceEEEEECcc-cC---------------CCHHHHHHHHHH-cCceecCCcCccc----cc-cc
Confidence 9887 88887541 234555555442 11 356788888854 6999998764210 00 00
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHh
Q 038499 475 DEAQSYQIRSAIQKGYVGVKPGWTRISFPYY----MSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~----~t~eeid~ll~al~~v~~~ 524 (609)
. .++++|++++.+ +|++|+++++++|+++++.
T Consensus 352 ~------------------~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 352 R------------------VTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp T------------------TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred c------------------CCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 0 257899999764 7999999999999999876
No 109
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.94 E-value=1.8e-25 Score=240.06 Aligned_cols=361 Identities=10% Similarity=-0.035 Sum_probs=234.6
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG--QEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~--~~~~vift~sGttaal 153 (609)
+++.|..+... +.++.|.+++.+.+.... ....|.......++++.+.+++.+.+|.+ ++++|++| +|+++++
T Consensus 29 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~-~g~~~a~ 104 (422)
T 3fvs_A 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDF---MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVT-VGGYGAL 104 (422)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCG---GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEE-SHHHHHH
T ss_pred CceEeCCCCCCCCCCHHHHHHHHHHHhCCC---ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEE-CChHHHH
Confidence 34555544433 467788899888775421 00011111122445555556666666643 31379998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC----C--------CCCCHHHH
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD----D--------GLLDIEAL 221 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~----~--------g~ld~e~L 221 (609)
..++..+ +++|| .|++..+.|+++...++..|++++.++.+. + +.+|+++|
T Consensus 105 ~~~~~~~---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l 167 (422)
T 3fvs_A 105 FTAFQAL---------------VDEGD--EVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMEL 167 (422)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHH
T ss_pred HHHHHHH---------------cCCCC--EEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHH
Confidence 9888876 37888 689999999999888999999999999875 3 36899999
Q ss_pred HHHHhhhccCCCceEEEEecccCcccccc---CHHHHHHHHHHhCCeEEEeccccCC----cccccCCCCCC-CCccEEE
Q 038499 222 RSKLELYKDAKRPILGSFSACSNVTGIYS---DTRSIARLLHQYGGFACFDFAASGP----YVEIDVRSGQT-DGYDAIF 293 (609)
Q Consensus 222 ~~al~~~~~~~~~~lv~~s~~sn~TG~~~---dl~~I~~la~~~g~~vivD~A~~~~----~~~id~~~~~~-~~~D~v~ 293 (609)
+++++ ++++++++++++||||.+. ++++|+++|++||+++|+|++++.. ....++..+.. .+.++++
T Consensus 168 ~~~~~-----~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (422)
T 3fvs_A 168 AGKFT-----SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTI 242 (422)
T ss_dssp HTTCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEE
T ss_pred HhhcC-----CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEE
Confidence 99997 5799999999999999998 4889999999999999999998752 22223332211 1456888
Q ss_pred EcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHH
Q 038499 294 LSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVK 372 (609)
Q Consensus 294 ~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~ 372 (609)
.|+||++|.| .++|++++++++ ++.+... ......+.+......+...+...
T Consensus 243 ~S~sK~~g~~G~r~G~~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~~~~a~~~~l~~~ 295 (422)
T 3fvs_A 243 GSAGKTFSATGWKVGWVLGPDHI--MKHLRTV-------------------------HQNSVFHCPTQSQAAVAESFERE 295 (422)
T ss_dssp EEHHHHHTCGGGCCEEEECCHHH--HHHHHHH-------------------------HHTTTCCCCHHHHHHHHHHHHHH
T ss_pred ecchhccCCccceEEEEEeCHHH--HHHHHHH-------------------------HhhccCCCCcHHHHHHHHHHhhc
Confidence 8999999733 358999998887 2222110 00011122222221111111100
Q ss_pred ------HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC--CCCCCCChHH
Q 038499 373 ------EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKT--ETDKPLHGPF 444 (609)
Q Consensus 373 ------~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~--~~~~~l~~~~ 444 (609)
.....+.+.++.+++++++.+.|+++ ++++..+. .+++.+.... ..... ... .........+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~ 365 (422)
T 3fvs_A 296 QLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQ----GSYFLITDIS-DFKRK----MPDLPGAVDEPYDRR 365 (422)
T ss_dssp HHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCS----BSSEEEEECH-HHHHH----CCCCCCCTTCCHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCC----eeeEEEEech-hhccc----ccccccccccccHHH
Confidence 12345778888999999999999988 88877652 3444444332 10000 000 0000000446
Q ss_pred HHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 445 VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 445 v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++.|.+++||.+.+|..|..+.... ..++++|||++. ++++++.++++|++++++
T Consensus 366 ~~~~ll~~~gv~v~~g~~f~~~~~~~----------------------~~~~~iRis~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 366 FVKWMIKNKGLVAIPVSIFYSVPHQK----------------------HFDHYIRFCFVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHCEECEEGGGGSCHHHHT----------------------TSCSEEEEECCC--CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCEEEeCcHHhcCCcCCC----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHhh
Confidence 77776676799999998887431110 025899999985 999999999999988754
No 110
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=7.9e-25 Score=232.85 Aligned_cols=356 Identities=13% Similarity=0.046 Sum_probs=230.3
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
..++.+.+++.+.+...+ +.. .....++++.+++++|.+ +++++++|++ ++..++..+....
T Consensus 12 ~~~~~~~~a~~~~~~~~~-------~~~----~~~~~~l~~~la~~~~~~---~~i~~~sGt~-a~~~al~~~~~~~--- 73 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSKM-------FTM----GEYVKQYETQFAKTFGSK---YAVMVSSGST-ANLLMIAALFFTK--- 73 (390)
T ss_dssp CCCHHHHHHHHHHHHHTC-------CSS----CHHHHHHHHHHHHHHTCS---EEEEESCHHH-HHHHHHHHTTSSS---
T ss_pred CCCHHHHHHHHHHHHcCC-------CCC----ChHHHHHHHHHHHHHCCC---cEEEECCHHH-HHHHHHHHHHhhh---
Confidence 456778888877765311 111 234778999999999986 4677768885 7777777651000
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCcc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVT 246 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T 246 (609)
...+++|| .|+++.++|+++..+++..|++++.++++++ +.+|+++|+++++ +++++++++ |++
T Consensus 74 -----~~~~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~---~~~ 138 (390)
T 3b8x_A 74 -----KPRLKKGD--EIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-----DSTKAILTV---NLL 138 (390)
T ss_dssp -----SCSCCTTC--EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-----TTEEEEEEE---CGG
T ss_pred -----hcCCCCcC--EEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-----cCCeEEEEE---CCc
Confidence 00036787 7999999999999999999999999999875 8899999999998 578988887 468
Q ss_pred ccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcC--CCCCCCCCCcEEEEEec-hhhccCCCCC
Q 038499 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLST--HKFLGGPGSPGILLMTK-ALYQLGSFPP 323 (609)
Q Consensus 247 G~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~--hK~lggp~g~G~L~~~~-~~~~l~~~~p 323 (609)
|...|+++|.++|++||+++|+|++|+.+... +...... ..|+.++|. +|.++++.| |++++++ ++. +.+.+
T Consensus 139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~--~~~~~ 213 (390)
T 3b8x_A 139 GNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIY--HILLC 213 (390)
T ss_dssp GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHH--HHHHH
T ss_pred cChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCccccc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHH--HHHHH
Confidence 88999999999999999999999999987655 4433311 236666542 344444555 9999887 441 12222
Q ss_pred CccCC--CceEeeccc--cccccccccc---ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 324 STCGG--GTVNYVNGF--NEKDTLYLED---IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 324 ~~~gg--g~v~~~~~~--~~~~~~~~~~---~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
...+| +........ ......+... .......+++++.+.+..+. + ...+.+.++.+++++++.+.|+
T Consensus 214 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~---l---~~l~~~~~~~~~~~~~l~~~L~ 287 (390)
T 3b8x_A 214 IRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ---L---KKLPRFISVRRKNAEYFLDKFK 287 (390)
T ss_dssp HTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHhc
Confidence 22222 110000000 0000000000 00112233666655443221 1 1246778888999999999999
Q ss_pred CCCceEEeCCCCCCCcceEEE--EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc---CcccCC-hhhhh
Q 038499 397 PNQNIKILGNTSTKRQAILSF--NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG---GCACAG-PYGHH 470 (609)
Q Consensus 397 ~~p~i~v~~~~~~~r~~~~~f--~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~---G~~ca~-p~~~~ 470 (609)
++|++++..+. .+.+++.| .+.. . ...+...+.+.|.+ .||.++. |+.|.. |....
T Consensus 288 ~~~~~~~~~~~--~~~~~~~~~i~~~~-~--------------~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~ 349 (390)
T 3b8x_A 288 DHPYLDVQQET--GESSWFGFSFIIKK-D--------------SGVIRKQLVENLNS-AGIECRPIVTGNFLKNTDVLKY 349 (390)
T ss_dssp TCSSEEECCCC--SBCCCCEEEEEECT-T--------------SCCCHHHHHHHHHH-TTBCCBCSTTSSGGGCHHHHTT
T ss_pred CCCCcccCCCC--CCcccEEEEEEecC-c--------------CcccHHHHHHHHHH-CCCCeeeecCCchhhcchhhhc
Confidence 99999987642 23344333 3331 0 01467889999965 6999998 677877 64321
Q ss_pred -----hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 471 -----LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 471 -----ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
+..++ .+..+ ..+.+||+++.++|++|+++++++|
T Consensus 350 ~~~~~~~~~~--~~~~~-----------~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 350 FDYTVHNNVD--NAEYL-----------DKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CEEEESSCCH--HHHHH-----------HHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCCCCcCCCh--HHHHH-----------hcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 11222 22221 1378999999999999999999987
No 111
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.94 E-value=5.8e-25 Score=233.66 Aligned_cols=349 Identities=14% Similarity=0.068 Sum_probs=229.0
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.|+.+.+++.+.+...+ +.. .....++++.+++++|.+ +++++ +|+++++..++.+++
T Consensus 18 ~~~~~~~a~~~~~~~~~-------~~~----~~~~~~l~~~la~~~~~~---~~~~~-~~gt~al~~~~~~~~------- 75 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGW-------ITT----GPKNQELEAAFCRLTGNQ---YAVAV-SSATAGMHIALMALG------- 75 (393)
T ss_dssp CCHHHHHHHHHHHHHTC-------CSS----SHHHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHHHHHHTT-------
T ss_pred CCHHHHHHHHHHHhcCC-------cCC----ChHHHHHHHHHHHHhCCC---cEEEe-cChHHHHHHHHHHcC-------
Confidence 44667788877664321 001 134678999999999984 68888 455678888888763
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEEEEecccCccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILGSFSACSNVTG 247 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG 247 (609)
+++|| .|+++.++|+++...++..|++++.++++++ +.+|+++|+++++ +++++++++ |+||
T Consensus 76 -------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----~~~~~v~~~---~~~G 138 (393)
T 1mdo_A 76 -------IGEGD--EVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-----PQTKAIIPV---HYAG 138 (393)
T ss_dssp -------CCTTC--EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-----TTEEEECCB---CGGG
T ss_pred -------CCCCC--EEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-----CCceEEEEe---CCCC
Confidence 36888 6999999999999999999999999999874 6899999999998 578888765 4899
Q ss_pred cccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCC-ccEEEEcCC--CCCCCCCCcEEEEEe-chhhccCCCCC
Q 038499 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDG-YDAIFLSTH--KFLGGPGSPGILLMT-KALYQLGSFPP 323 (609)
Q Consensus 248 ~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~-~D~v~~S~h--K~lggp~g~G~L~~~-~~~~~l~~~~p 323 (609)
.+.|+++|.++|++||+++|+|++++.+... +..++ + .|++++|+| |+++|+ ..|+++.+ +++ ++.+.+
T Consensus 139 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~---~~~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~--~~~l~~ 211 (393)
T 1mdo_A 139 APADLDAIYALGERYGIPVIEDAAHATGTSY-KGRHI---GARGTAIFSFHAIKNITCA-EGGIVVTDNPQF--ADKLRS 211 (393)
T ss_dssp CCCCHHHHHHHHHHHTCCBCEECTTCTTCEE-TTEET---TSSSEEEEECCTTSSSCSS-SCEEEEESCHHH--HHHHHH
T ss_pred CcCCHHHHHHHHHHcCCeEEEECccccCCeE-CCeec---CCCCeEEEeCCCCCccccc-cceEEEeCCHHH--HHHHHH
Confidence 9999999999999999999999999876443 22223 3 799999999 999865 46899986 555 222222
Q ss_pred CccCCCceEeecccccccccccccccccc---cCCC----hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhC
Q 038499 324 STCGGGTVNYVNGFNEKDTLYLEDIEERE---SGGT----PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLL 396 (609)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~r~---~~gt----p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~ 396 (609)
...++... +.+. .+.......+ +.|+ +++.+ ++.+. ...+.+.+.++.+++++++.+.|.
T Consensus 212 ~~~~~~~~---~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~----a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~ 278 (393)
T 1mdo_A 212 LKFHGLGV---DAWD----RQSGGRAPQAEVLAPGYKYNLPDLNA----AIALA--QLQKLDALNARRAAIAAQYHQAMA 278 (393)
T ss_dssp HTBTTEEC---C---------------CCEESSCCCBCCCCHHHH----HHHHH--HHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcc---cchh----hhcccccccccccccCccCCCCHHHH----HHHHH--HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222110 0000 0100001111 2233 22222 11111 112466777888889999999999
Q ss_pred CCCceEEeCCCC--C-CCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC--Chhhhhh
Q 038499 397 PNQNIKILGNTS--T-KRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA--GPYGHHL 471 (609)
Q Consensus 397 ~~p~i~v~~~~~--~-~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca--~p~~~~l 471 (609)
+++ +++..... . ....++++.+.. .. ...+...+.+.|.+ .||.+++|..|. .|+...
T Consensus 279 ~~~-~~~~~~~~~~~~~~~~~~~v~~~~-~~-------------~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~- 341 (393)
T 1mdo_A 279 DLP-FQPLSLPSWEHIHAWHLFIIRVDE-AR-------------CGITRDALMASLKT-KGIGTGLHFRAAHTQKYYRE- 341 (393)
T ss_dssp TSS-CEECCCCSSCEECCCSCEEEECCH-HH-------------HSSCHHHHHHHHHH-TTBCCBCCCCCGGGSHHHHH-
T ss_pred cCC-cccccCCCCCCCceeEEEEEEecc-cc-------------cccCHHHHHHHHHh-CCCCcccccCccccChhhhc-
Confidence 886 88764321 1 122245555431 00 00357789999976 699999987763 121110
Q ss_pred cCC---ChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 472 LDL---DEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 472 l~i---~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+. ..+.+..+ ..+++|++++.++|++|+++++++|++++++.
T Consensus 342 -~~~~~~~~~~~~~-----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 342 -RFPTLTLPDTEWN-----------SERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp -HSTTCCCHHHHHH-----------HTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred -cCCccCChhHHHH-----------HhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 00 00111100 14689999999999999999999999987653
No 112
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.94 E-value=1.7e-25 Score=236.57 Aligned_cols=333 Identities=13% Similarity=0.028 Sum_probs=224.3
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCC--CCCcEEEeCChHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGG--QEDAMIFCGSGTT 150 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~--~~~~vift~sGtt 150 (609)
++.++.+... +.++.+.+++.+.+... ..+ .|.. .....++++.+++++ |.+ ++++|++| +|++
T Consensus 27 ~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~~----~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~-~g~~ 97 (376)
T 2dou_A 27 LIDLSIGSTDLPPPEAPLKALAEALNDP--TTY--GYCL----KSCTLPFLEEAARWYEGRYGVGLDPRREALAL-IGSQ 97 (376)
T ss_dssp CEECSSCCCCCCCCHHHHHHHHHHTTCG--GGS--SCCC----HHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEE-SSHH
T ss_pred EEeccCCCCCCCCCHHHHHHHHHHHhCC--CcC--CCCC----CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEc-CCcH
Confidence 4555444332 24678888888776431 111 1111 123455666666665 875 22379998 7888
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~ 230 (609)
+++..++.++ +++|| .|++..+.|+++...++..|++++.++.+.+..+|+++|+++++
T Consensus 98 ~a~~~~~~~l---------------~~~gd--~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~---- 156 (376)
T 2dou_A 98 EGLAHLLLAL---------------TEPED--LLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW---- 156 (376)
T ss_dssp HHHHHHHHHH---------------CCTTC--EEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH----
T ss_pred HHHHHHHHHh---------------cCCCC--EEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc----
Confidence 8898888876 36788 69999999999998899999999999984444689999999997
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCC-CCCCccEEEEcCCCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSG-QTDGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~-~~~~~D~v~~S~hK~lggp 303 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++.... +.++... ...+.++++.|+||++|.|
T Consensus 157 -~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 235 (376)
T 2dou_A 157 -REAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLA 235 (376)
T ss_dssp -HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCG
T ss_pred -cCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCCh
Confidence 46899999999999999987 56789999999999999999875321 1121111 1124578889999999744
Q ss_pred C-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH-hcCHHHHH
Q 038499 304 G-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-YIGHEVIK 381 (609)
Q Consensus 304 ~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~~g~~~i~ 381 (609)
+ .+|++++++++ ++.+... ......+++.+.+. ++.+.+ .. ....+.+.
T Consensus 236 G~r~G~~~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~l-~~~~~~~~~~~ 286 (376)
T 2dou_A 236 GFRLGFALGSEEA--LARLERV------------------------KGVIDFNQYAGVLR--MGVEAL-KTPKEVVRGYA 286 (376)
T ss_dssp GGCCEEEEECHHH--HHHHHHH------------------------HHHHCCCSCHHHHH--HHHHHH-TSCHHHHHHHH
T ss_pred hheeEEEecCHHH--HHHHHHH------------------------HHhcccCCCHHHHH--HHHHHH-hCcHHHHHHHH
Confidence 3 47999999887 2222111 00111122222221 222222 11 22356677
Q ss_pred HHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc
Q 038499 382 KQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC 461 (609)
Q Consensus 382 ~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~ 461 (609)
++.+++++++.+.|+++ +++..+ ..+++.+...+ .. .+...+.+.|.++ ||.+++|.
T Consensus 287 ~~~~~~~~~l~~~L~~~--~~~~~~----~~~~~~~~~~~-~~---------------~~~~~~~~~l~~~-gi~v~~g~ 343 (376)
T 2dou_A 287 RVYRERALGMAEALKGV--LSLLPP----RATMYLWGRLP-EG---------------VDDLEFGLRLVER-GVALAPGR 343 (376)
T ss_dssp HHHHHHHHHHHHHHTTT--SEECCC----CBSSEEEEECC-TT---------------CCHHHHHHHHHHT-TEECEEGG
T ss_pred HHHHHHHHHHHHHHHHh--cCccCC----CeeEEEEEECC-CC---------------CCHHHHHHHHHHC-CEEEcCch
Confidence 78888899999999887 666544 23554443333 11 3567888888776 99999887
Q ss_pred ccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 462 ACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 462 ~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.|... .++++||+++. ++++++.++++|++++
T Consensus 344 ~f~~~---------------------------~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 344 GFGPG---------------------------GKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp GGCGG---------------------------GTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred hhCCC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 76411 14899999984 8999999999998753
No 113
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.94 E-value=3e-25 Score=240.90 Aligned_cols=334 Identities=15% Similarity=0.158 Sum_probs=225.4
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CC-CCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GG-GQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~-~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
+++.+.+++.+.+........ .|... ....++++.+++++ |. +++ +|++| +|+++++..++.++
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~--~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~-~v~~t-~G~~~al~~~~~~l--- 160 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKAL--QYGTT----KGFTPLRETLMKWLGKRYGISQDN-DIMIT-SGSQQALDLIGRVF--- 160 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHH--SCCCT----TCCHHHHHHHHHHHHHHHCCCTTS-EEEEE-SSHHHHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHhhhHHHh--CCCCC----CCcHHHHHHHHHHHHHhcCcCChh-hEEEe-CcHHHHHHHHHHHH---
Confidence 456788887776643100000 01111 11344555666665 88 454 89998 78888999988877
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc-cCCCceEE-EEec
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK-DAKRPILG-SFSA 241 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~-~~~~~~lv-~~s~ 241 (609)
+++|| .|++..+.|+++...++..|++++.++.+++| +|+++|+++++... ...+++++ ++++
T Consensus 161 ------------~~~Gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~ 225 (448)
T 3aow_A 161 ------------LNPGD--IVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPT 225 (448)
T ss_dssp ------------CCTTC--EEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred ------------cCCCC--EEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCC
Confidence 37888 69999999999999999999999999988765 89999999997210 00368886 5789
Q ss_pred ccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEec
Q 038499 242 CSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTK 313 (609)
Q Consensus 242 ~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~ 313 (609)
++||||.+.+. ++|.++|++||+++|+|++++.... ..++..+...+.++++.|++|+++ |+ .+|++++++
T Consensus 226 ~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~ 304 (448)
T 3aow_A 226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP 304 (448)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH
Confidence 99999999874 5899999999999999999876432 122332222356788999999998 53 489999998
Q ss_pred hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHH
Q 038499 314 ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE---YIGHEVIKKQEETYIER 390 (609)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~---~~g~~~i~~~~~~l~~~ 390 (609)
++ ++.+... ......+++.+.+.+ +.+++ .+ ....+.++++.++.+++
T Consensus 305 ~l--~~~l~~~------------------------~~~~~~~~~~~~q~a--~~~~L-~~~~~~~~~~~~~~~~~~~~~~ 355 (448)
T 3aow_A 305 GI--IRKMEIA------------------------KQSTDLCTNVFGQVV--AWRYV-DGGYLEKHIPEIRKFYKPRRDA 355 (448)
T ss_dssp HH--HHHHHHH------------------------HHHHHSSCCHHHHHH--HHHHH-HTTHHHHHHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHH------------------------HHHhcCCCCHHHHHH--HHHHH-HhCCHHHHHHHHHHHHHHHHHH
Confidence 87 3222111 011112333333322 22222 11 12245666777788888
Q ss_pred HHHHhCC-CC-ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhh
Q 038499 391 ALERLLP-NQ-NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYG 468 (609)
Q Consensus 391 ~~~~L~~-~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~ 468 (609)
+.+.|++ +| ++++..+ ..+++.+...+ .. .+...+.+.|.++ ||.+++|..|... +
T Consensus 356 l~~~L~~~~~~g~~~~~p----~~g~~~~v~~~-~~---------------~~~~~l~~~l~~~-gV~v~pg~~f~~~-~ 413 (448)
T 3aow_A 356 MLEALEEFMPEGVKWTKP----EGGMFIWVTLP-DG---------------IDSKKMLERAIKK-GVAYVPGEAFYAH-R 413 (448)
T ss_dssp HHHHHHHHCCTTCEECCC----SBSSEEEEECS-TT---------------CCHHHHHHHHHHT-TEECEEGGGGSTT-C
T ss_pred HHHHHHHhCCCCeEEeCC----CccEEEEEEcC-CC---------------CCHHHHHHHHHHC-CcEEEcchhhcCC-C
Confidence 8888876 57 6887654 23444444443 11 3577888888776 9999998776521 0
Q ss_pred hhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 469 HHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 469 ~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..++++||+++. .++++++.++++|+++++..
T Consensus 414 ------------------------~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 414 ------------------------DVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp ------------------------CCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 025899999986 48999999999999987653
No 114
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=7.9e-26 Score=241.74 Aligned_cols=357 Identities=11% Similarity=-0.008 Sum_probs=229.6
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAI 153 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal 153 (609)
++++|+.+... +.++.|.+++.+.+.... .+. |....+..++++.+.+++.+.+| .+++++|++| +|+++++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~~~--y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~-~g~~~a~ 98 (410)
T 3e2y_A 24 SVVNLGQGFPDISPPSYVKEELSKAAFIDN--MNQ--YTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVA-VGAYGSL 98 (410)
T ss_dssp TSEECSSCCCCSCCCHHHHHHHHHHHTCGG--GGS--CCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCcc--ccC--CCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CCcHHHH
Confidence 67888887655 467889999988775320 000 11111123334444444444444 4452489998 7888899
Q ss_pred HHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-----------CCCCCCHHHHH
Q 038499 154 KRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-----------DDGLLDIEALR 222 (609)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-----------~~g~ld~e~L~ 222 (609)
..++..+ +++|| .|++..+.|+++...++..|++++.++++ .++.+|+++|+
T Consensus 99 ~~~~~~~---------------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~ 161 (410)
T 3e2y_A 99 FNSIQGL---------------VDPGD--EVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELE 161 (410)
T ss_dssp HHHHHHH---------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHH
T ss_pred HHHHHHh---------------cCCCC--EEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHH
Confidence 9888876 37888 68899999999988899999999999876 24568999999
Q ss_pred HHHhhhccCCCceEEEEecccCcccccc---CHHHHHHHHHHhCCeEEEeccccCCc----ccccCCCCC-CCCccEEEE
Q 038499 223 SKLELYKDAKRPILGSFSACSNVTGIYS---DTRSIARLLHQYGGFACFDFAASGPY----VEIDVRSGQ-TDGYDAIFL 294 (609)
Q Consensus 223 ~al~~~~~~~~~~lv~~s~~sn~TG~~~---dl~~I~~la~~~g~~vivD~A~~~~~----~~id~~~~~-~~~~D~v~~ 294 (609)
++++ ++++++++++++||||.+. ++++|+++|++||+++|+|++++... ...++.... ..+.++++.
T Consensus 162 ~~~~-----~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (410)
T 3e2y_A 162 SKFS-----SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIG 236 (410)
T ss_dssp TTCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEE
T ss_pred hhcC-----CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEe
Confidence 9987 5799999999999999995 68889999999999999999987422 222232221 113458888
Q ss_pred cCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHHHHHH--
Q 038499 295 STHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFW-- 370 (609)
Q Consensus 295 S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~-- 370 (609)
|++|++|.| .++|++++++++ ++.+... ......+.+.+.+.+ .+++.-.
T Consensus 237 S~sK~~g~~G~r~G~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~~~~a~~~~l~~~~~ 290 (410)
T 3e2y_A 237 SAGKTFSVTGWKLGWSIGPAHL--IKHLQTV------------------------QQNSFYTCATPLQAALAEAFWIDIK 290 (410)
T ss_dssp EHHHHSSCGGGCCEEEECCHHH--HHHHHHH------------------------HHTTTCCCCHHHHHHHHHHHHHHHT
T ss_pred cchhhcCCCCceEEEEEECHHH--HHHHHHH------------------------HHhhccCCChHHHHHHHHHHHhhhc
Confidence 999999733 358999999887 2222110 000011122222211 1221100
Q ss_pred --HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 371 --VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 371 --~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
.......+.+.++.+++++++.+.|+++ ++.+..+ ..+++.+.... ..... .........+..++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~ 360 (410)
T 3e2y_A 291 RMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVP----DGGYFIIADVS-SLGAD----LSDMNSDEPYDYKFVKW 360 (410)
T ss_dssp TTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBC----SBSSEEEEECG-GGCCC----CTTCCSSCCHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC----CccEEEEEEch-hhhcc----cccccccccCHHHHHHH
Confidence 0012345778888889999999999888 8887765 23444444332 11000 00000000112366666
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
|.+++||.+.+|..|..+..... .++++|||++. ++++++.++++|++
T Consensus 361 ll~~~gv~v~~g~~f~~~~~~~~----------------------~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 361 MTKHKKLTAIPVSAFCDSKSKPH----------------------FEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHHHSEECEEGGGGSCTTTHHH----------------------HTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred HHHHcCEEEeCchhhCCCCCCCC----------------------CCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 65667999999988864211000 15899999875 99999999999875
No 115
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.94 E-value=7.5e-25 Score=233.02 Aligned_cols=344 Identities=13% Similarity=0.017 Sum_probs=231.7
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC---CCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG---QEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~---~~~~vift~sGttaa 152 (609)
+++.|+.+... +.++.|.+++.+.+......+.. .+..++++++.+++++.+|.+ ++++|++| +|++++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~------~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t-~g~~~a 103 (396)
T 3jtx_A 31 EAVPLHIGEPKHPTPKVITDALTASLHELEKYPLT------AGLPELRQACANWLKRRYDGLTVDADNEILPV-LGSREA 103 (396)
T ss_dssp CCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCT------TCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEE-SSHHHH
T ss_pred CeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCC------CCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEc-CCcHHH
Confidence 56677655433 35678899998877543332221 113456666677777777853 43379998 788889
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCC---ceEEEECCCCccchHHHHHHcCceEEEEecCCCC-CCCHHHHHHHHhhh
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEE---RWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDG-LLDIEALRSKLELY 228 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd---~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g-~ld~e~L~~al~~~ 228 (609)
+..++..+. ++|+ +..|++..+.|+++...++..|++++.++.+.++ .+|+++|+++++
T Consensus 104 l~~~~~~~~---------------~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-- 166 (396)
T 3jtx_A 104 LFSFVQTVL---------------NPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-- 166 (396)
T ss_dssp HHHHHHHHC---------------CC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH--
T ss_pred HHHHHHHHh---------------CCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc--
Confidence 999888763 6752 1279999999999988899999999999996544 689999999998
Q ss_pred ccCCCceEEEEecccCccccccCHHH---HHHHHHHhCCeEEEeccccCCcc----cccCCC----CC-CCCccEEEEcC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSDTRS---IARLLHQYGGFACFDFAASGPYV----EIDVRS----GQ-TDGYDAIFLST 296 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~dl~~---I~~la~~~g~~vivD~A~~~~~~----~id~~~----~~-~~~~D~v~~S~ 296 (609)
++++++++++++||||.+.|.++ |+++|++||+++|+|++++.... +..... +. ..+.++++.|+
T Consensus 167 ---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 243 (396)
T 3jtx_A 167 ---KRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSL 243 (396)
T ss_dssp ---HTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEES
T ss_pred ---cCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecc
Confidence 47999999999999999988665 89999999999999999875322 111100 00 12567899999
Q ss_pred CCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc
Q 038499 297 HKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI 375 (609)
Q Consensus 297 hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~ 375 (609)
+|.+|.| .++|+++.++++ ++.+... ......+++......+. +. +....
T Consensus 244 sK~~~~~G~r~G~~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~~~~a~~-~~-l~~~~ 294 (396)
T 3jtx_A 244 SKRSNVPGLRSGFVAGDAEL--LKNFLLY-------------------------RTYHGSAMSIPVQRASI-AA-WDDEQ 294 (396)
T ss_dssp TTTSSCGGGCCEEEEECHHH--HHHHHHH-------------------------HHHHTCCCCHHHHHHHH-HH-HHCCH
T ss_pred ccccCCcccceEEEEeCHHH--HHHHHHH-------------------------HhhcccCCCHHHHHHHH-HH-hCCHH
Confidence 9987644 358999998877 2222110 01112233333322221 11 12233
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCc
Q 038499 376 GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGI 455 (609)
Q Consensus 376 g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI 455 (609)
..+.++++.+++++++.+.|.++ +.+..+ ..+++.+...+ . .+...+++.|.+++||
T Consensus 295 ~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~----~~~~~~~~~~~-~----------------~~~~~~~~~l~~~~gi 351 (396)
T 3jtx_A 295 HVIDNRRLYQEKFERVIPILQQV--FDVKLP----DASFYIWLKVP-D----------------GDDLAFARNLWQKAAI 351 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT--SCCCCC----SSSSEEEEECT-T----------------SCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCccCC----CeeEEEEEECC-C----------------CCHHHHHHHHHHHCCE
Confidence 45677788888899999999875 223322 34555554444 1 3567888888666799
Q ss_pred EeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 456 QARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 456 ~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.+++|..|.... +. ....++++||+++. ++++++.++++|++++
T Consensus 352 ~v~~g~~~~~~~-~~--------------------~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 352 QVLPGRFLARDT-EQ--------------------GNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp ECEEGGGGCCCC-TT--------------------CCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred EEeCChHhCCcc-cc--------------------cCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 999998877320 00 00125899999975 9999999999998763
No 116
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=2.8e-25 Score=239.25 Aligned_cols=356 Identities=14% Similarity=0.095 Sum_probs=225.5
Q ss_pred CceEEecCCCCCCChHHHHHHHHHhhcCCc-cCC-CCCCchhhHHHHHHHHHHHHHHHHHhC--------CCCCCcEEEe
Q 038499 76 RRLTYADHTASGRSLRYIENYIINNVLPFY-GNT-HTCDSYVGQHTTNMVHEASNYIKKCLG--------GGQEDAMIFC 145 (609)
Q Consensus 76 ~~~vyld~~a~g~~~~~v~~ai~~~~~~~~-~n~-~~~~~~~~~~~~~~~~e~r~~ia~~~g--------~~~~~~vift 145 (609)
...+.|+.+.+...++.+.+++.+...... ... ........+.......++++.++++++ .+++ +|+++
T Consensus 36 ~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~-~i~~~ 114 (428)
T 1iay_A 36 NGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-RVVMA 114 (428)
T ss_dssp TSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-SCEEE
T ss_pred CceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh-hEEEc
Confidence 467788776666667778888875431100 000 000000000000013456666666665 5565 88898
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcCceEEEEecCC--CCCCCHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSLAEVVEIGLDD--DGLLDIEALR 222 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~g~ld~e~L~ 222 (609)
+|+++++..++.++. ++|| .|+++.+.|+++...+. ..|++++.++.+. ++.+|+++|+
T Consensus 115 -~G~~~ai~~~~~~~~---------------~~gd--~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 176 (428)
T 1iay_A 115 -GGATGANETIIFCLA---------------DPGD--AFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVK 176 (428)
T ss_dssp -EHHHHHHHHHHHHHC---------------CTTC--EEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHH
T ss_pred -cChHHHHHHHHHHhC---------------CCCC--eEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHH
Confidence 899999998888763 6888 69999999998876554 5799999999874 3478999999
Q ss_pred HHHhhhcc-CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCC------C
Q 038499 223 SKLELYKD-AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTD------G 288 (609)
Q Consensus 223 ~al~~~~~-~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~------~ 288 (609)
+++++... .++++++++++++||||.+.| +++|+++|++||+++|+|++++.... ..++..+... +
T Consensus 177 ~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (428)
T 1iay_A 177 EAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCN 256 (428)
T ss_dssp HHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSC
T ss_pred HHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCC
Confidence 99974211 136899999999999999999 88999999999999999999875211 1121111000 1
Q ss_pred cc--EEEEcCCCCCCCCC-CcEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHH
Q 038499 289 YD--AIFLSTHKFLGGPG-SPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIR 364 (609)
Q Consensus 289 ~D--~v~~S~hK~lggp~-g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~ 364 (609)
.| +++.|+||++|.|+ .+|++++ ++++ ++.+... ... .+.+.+.+.+
T Consensus 257 ~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~--~~~~~~~-------------------------~~~-~~~~~~~~~a- 307 (428)
T 1iay_A 257 KDLVHIVYSLSKDMGLPGFRVGIIYSFNDDV--VNCARKM-------------------------SSF-GLVSTQTQYF- 307 (428)
T ss_dssp TTSEEEEEESTTTSSCGGGCEEEEEESCHHH--HHHHHHH-------------------------HTT-SCCCHHHHHH-
T ss_pred CCcEEEEecchhhcCCCCceEEEEEeCCHHH--HHHHHHH-------------------------Hhc-ccCCHHHHHH-
Confidence 56 88899999997443 4799999 4555 2222100 000 1122222211
Q ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 365 AALAFWVKEY----IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 365 aal~~~~~~~----~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
+.+++ .+. ...+.+.++.++.++++.+.|+++ +++++.+ ..+++.+...+ .... .....
T Consensus 308 -~~~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~-~~~~---------~~~~~ 370 (428)
T 1iay_A 308 -LAAML-SDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKN----NAGLFCWMDLR-PLLR---------ESTFD 370 (428)
T ss_dssp -HHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCC----SSSSEEEEECG-GGCS---------SSSHH
T ss_pred -HHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCC----CeeEEEEEech-hhcC---------CCchh
Confidence 11111 111 134567778888899999999877 6766543 23444443333 1000 00001
Q ss_pred ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
....+.+.|.+++||.+++|..|... .++++||+++ .++++++++++++|++
T Consensus 371 ~~~~l~~~l~~~~gi~v~~~~~~~~~---------------------------~~~~iRis~~-~~~~e~i~~~~~~l~~ 422 (428)
T 1iay_A 371 SEMSLWRVIINDVKLNVSPGSSFECQ---------------------------EPGWFRVCFA-NMDDGTVDIALARIRR 422 (428)
T ss_dssp HHHHHHHHHHHTSCEECEEGGGGTCS---------------------------SSSEEEEECS-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEeCchhhCCC---------------------------CCCEEEEEEe-cCCHHHHHHHHHHHHH
Confidence 24468888877679999987655411 1479999998 5899999999999999
Q ss_pred HHHh
Q 038499 521 IAIY 524 (609)
Q Consensus 521 v~~~ 524 (609)
+++.
T Consensus 423 ~l~~ 426 (428)
T 1iay_A 423 FVGV 426 (428)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8764
No 117
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.94 E-value=1e-25 Score=239.61 Aligned_cols=346 Identities=14% Similarity=0.059 Sum_probs=227.6
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.++.+.+++.+.+...+ +. .......++++.+++++|.+ .++++++|+ +++..++..++
T Consensus 34 ~~~~~~~a~~~~~~~~~-------~~---~~~~~~~~l~~~la~~~~~~---~~i~~~~gt-~al~~~l~~~~------- 92 (391)
T 3dr4_A 34 LDGNERDYVLECMDTTW-------IS---SVGRFIVEFEKAFADYCGVK---HAIACNNGT-TALHLALVAMG------- 92 (391)
T ss_dssp CCSSHHHHHHHHHHHTC-------CS---SCSHHHHHHHHHHHHHHTCS---EEEEESSHH-HHHHHHHHHHT-------
T ss_pred CCHHHHHHHHHHHHcCC-------cc---CCChHHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHcC-------
Confidence 34566777766554211 10 01234778999999999986 578886775 56877777764
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTG 247 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG 247 (609)
+++|| .|+++.++|+++...++..|++++.++++ +++.+|+++|+++++ +++++++ ++|+||
T Consensus 93 -------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~---~~n~tG 155 (391)
T 3dr4_A 93 -------IGPGD--EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-----PRTKAIM---PVHLYG 155 (391)
T ss_dssp -------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-----TTEEEEC---CBCGGG
T ss_pred -------CCCcC--EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-----CCceEEE---EECCCC
Confidence 46888 69999999999999999999999999998 467899999999987 5788776 568999
Q ss_pred cccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEc--CCCCCCCCCCcEEEEEechhhccCCCCCCc
Q 038499 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLS--THKFLGGPGSPGILLMTKALYQLGSFPPST 325 (609)
Q Consensus 248 ~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S--~hK~lggp~g~G~L~~~~~~~~l~~~~p~~ 325 (609)
.+.|+++|.++|++||+++|+|++++.+....+..... -.|++++| .||+++|+. .|+++.+++.. .+.+.+..
T Consensus 156 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~-gg~~~~~~~~~-~~~~~~~~ 231 (391)
T 3dr4_A 156 QICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGE-GGMITTNDDDL-AAKMRLLR 231 (391)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBS-CEEEEESCHHH-HHHHHHHH
T ss_pred ChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCC-eEEEEECCHHH-HHHHHHHH
Confidence 99999999999999999999999998776544322211 12555555 779998744 68888876531 12222222
Q ss_pred cCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeC
Q 038499 326 CGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILG 405 (609)
Q Consensus 326 ~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~ 405 (609)
.+|... ...++.. ......+...+ .+++.+. ...+.+.+.++.+++++++.+.|.++ ++++..
T Consensus 232 ~~g~~~---------~~~~~~~-~~g~~~~~~~l----~aa~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 294 (391)
T 3dr4_A 232 GQGMDP---------NRRYWFP-IVGFNYRMTNI----QAAIGLA--QLERVDEHLAARERVVGWYEQKLARL-GNRVTK 294 (391)
T ss_dssp BTTCCT---------TSTTCCS-SCCCBCBCCHH----HHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred hcCCCC---------CCccccc-ccccccCCCHH----HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence 222110 0001000 00011111111 2222322 23467788889999999999999988 887776
Q ss_pred C--CCC-CCc-ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc---ccCChhhhhhcCCChhH
Q 038499 406 N--TST-KRQ-AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC---ACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 406 ~--~~~-~r~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~---~ca~p~~~~ll~i~~~~ 478 (609)
+ ... ... .++.+.+.. . ...+...+.+.|.+ .||.+++|. .|.+++... .....+.
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~-~--------------~~~~~~~l~~~L~~-~GI~v~~~~~p~~~~~~~~~~-~~~~~~~ 357 (391)
T 3dr4_A 295 PHVALTGRHVFWMYTVRLGE-G--------------LSTTRDQVIKDLDA-LGIESRPVFHPMHIMPPYAHL-ATDDLKI 357 (391)
T ss_dssp CCCCTTSCCCCSSEEEEECS-S--------------CSSCHHHHHHHHHH-TTCCCEECCCCGGGSGGGGGG-CCTTCHH
T ss_pred cCCCCCCcceeEEEEEEECC-c--------------cchhHHHHHHHHHH-CCCceeecCCccccChhhhhc-CcCCChH
Confidence 5 221 122 234444432 1 11467889999976 599999886 666444331 1111122
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+..+ ..+.+||+++.++|++|+++++++|+++
T Consensus 358 ~~~~-----------~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 358 AEAC-----------GVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHH-----------HHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHH-----------HhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 2221 1478999999999999999999999865
No 118
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=2.1e-25 Score=238.91 Aligned_cols=334 Identities=12% Similarity=0.009 Sum_probs=227.9
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C--CCCCCcEEEeCChH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G--GGQEDAMIFCGSGT 149 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g--~~~~~~vift~sGt 149 (609)
.+++|+.+... +.++.+.+++ +.+.... . .|..... ..++++.+++++ | .+++ +|++| +|+
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~----~-~y~~~~g----~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~ 111 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-YENKPEV----V-YYSHSAG----IWELREAFASYYKRRQRVDVKPE-NVLVT-NGG 111 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-HHTCCSS----C-CCCCTTC----CHHHHHHHHHHHHHTSCCCCCGG-GEEEE-SHH
T ss_pred CEEeccCCCCCCCCCHHHHHHH-HHHhcCC----C-CCCCCCC----cHHHHHHHHHHHHHHhCCCCCHH-HEEEe-CCH
Confidence 57788777665 3567788888 7764311 0 0111111 234555555555 3 3444 89998 788
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLEL 227 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~ 227 (609)
++++..++.++ +++|| .|+++.+.|+++...++..|++++.++.++ +..+ +++|+++++
T Consensus 112 t~a~~~~~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~- 172 (409)
T 2gb3_A 112 SEAILFSFAVI---------------ANPGD--EILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN- 172 (409)
T ss_dssp HHHHHHHHHHH---------------CCTTC--EEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-
T ss_pred HHHHHHHHHHh---------------CCCCC--EEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-
Confidence 88899888876 36888 699999999999988999999999999875 3334 788888887
Q ss_pred hccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---ccc-CCCCCCCCccEEEEcCCCCC
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EID-VRSGQTDGYDAIFLSTHKFL 300 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id-~~~~~~~~~D~v~~S~hK~l 300 (609)
++++++++++++||||.+.| +++|.++|++||+++|+|++++.+.. ... +.. ..+.|+++.|+||++
T Consensus 173 ----~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~ 246 (409)
T 2gb3_A 173 ----ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSI--ESDKVVVIDSVSKKF 246 (409)
T ss_dssp ----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGS--CCTTEEEEEESTTTT
T ss_pred ----cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCcccc--CCCCEEEEecchhcc
Confidence 57899999999999999975 78899999999999999999876432 112 111 125699999999999
Q ss_pred CCCC-CcEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-HHHHHHHHHHHhcCH
Q 038499 301 GGPG-SPGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM-IRAALAFWVKEYIGH 377 (609)
Q Consensus 301 ggp~-g~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~-~~aal~~~~~~~~g~ 377 (609)
|.|+ .+|++++++ ++ ++.+.+. ..... +.+.+.+. +.+++.. ...+.
T Consensus 247 g~~G~r~G~~~~~~~~l--~~~l~~~------------------------~~~~~-~~~~~~~~a~~~~l~~---~~~~~ 296 (409)
T 2gb3_A 247 SACGARVGCLITRNEEL--ISHAMKL------------------------AQGRL-APPLLEQIGSVGLLNL---DDSFF 296 (409)
T ss_dssp TCGGGCCEEEECSCHHH--HHHHHHH------------------------HHHSC-CCCHHHHHHHHHHHTC---CHHHH
T ss_pred CCccceEEEEEECcHHH--HHHHHHH------------------------HhccC-CCCHHHHHHHHHHHhc---cHHHH
Confidence 7432 389999998 76 2222111 01111 22222221 1222211 12235
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEE-eCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhh----
Q 038499 378 EVIKKQEETYIERALERLLPNQNIKI-LGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDL---- 452 (609)
Q Consensus 378 ~~i~~~~~~l~~~~~~~L~~~p~i~v-~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~---- 452 (609)
+.+.++.+++++++.+.|+++ ++++ ..+ ..+++.+...+ + .+...+.+.|.++
T Consensus 297 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~~~~~~-~----------------~~~~~l~~~l~~~~~~~ 354 (409)
T 2gb3_A 297 DFVRETYRERVETVLKKLEEH-GLKRFTKP----SGAFYITAELP-V----------------EDAEEFARWMLTDFNMD 354 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCCBCCC----SBSSEEEEECS-S----------------SCHHHHHHHHHHSCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CceeeeCC----CeeEEEEEEeC-C----------------CCHHHHHHHHHhccccc
Confidence 667778888899999999877 7766 443 33555554333 1 3567888888776
Q ss_pred -cCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 453 -FGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 453 -~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+||.+++|..|....+ ..++++||+++ ++++++++++++|+++++..
T Consensus 355 ~~gi~v~~g~~f~~~~~------------------------~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 355 GETTMVAPLRGFYLTPG------------------------LGKKEIRIACV--LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp TEEEECEEGGGGCSSTT------------------------TTSSEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEeCchHhCCCCC------------------------CCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 5999998876642100 02589999998 89999999999999988654
No 119
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.94 E-value=7e-25 Score=230.57 Aligned_cols=286 Identities=14% Similarity=0.036 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
..++|+.+++++|.+++ +|+++ +|+++++..++.++ +++| | .|++..+.|+++...++..
T Consensus 60 ~~~lr~~la~~~~~~~~-~v~~~-~G~~~ai~~~~~~~---------------~~~g~d--~Vl~~~p~~~~~~~~~~~~ 120 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPE-QVLVS-RGADEGIELLIRAF---------------CEPGKD--AILYCPPTYGMYSVSAETI 120 (356)
T ss_dssp CHHHHHHHHHHHTSCGG-GEEEE-SHHHHHHHHHHHHH---------------CCTTTC--EEEECSSSCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChH-HEEEc-CCHHHHHHHHHHHH---------------hCCCCC--EEEEeCCChHHHHHHHHHc
Confidence 46789999999999876 89998 89999999988876 3678 7 6999999999999889999
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHH---HHHHHhCCeEEEeccccCCccc
Q 038499 202 LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIA---RLLHQYGGFACFDFAASGPYVE 278 (609)
Q Consensus 202 G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~---~la~~~g~~vivD~A~~~~~~~ 278 (609)
|++++.++.++++.+|+++|+++++ +++++++++++||||.+.|.++|. ++|+ +|+++|+|++++.....
T Consensus 121 g~~~~~v~~~~~~~~d~~~l~~~i~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~ 193 (356)
T 1fg7_A 121 GVECRTVPTLDNWQLDLQGISDKLD------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ 193 (356)
T ss_dssp TCEEEECCCCTTSCCCHHHHHTSCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG
T ss_pred CCEEEEeeCCCCCCCCHHHHHHHhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC
Confidence 9999999988777899999988775 588999999999999999866655 4555 89999999998754322
Q ss_pred ccCCCC-CCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 279 IDVRSG-QTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 279 id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
.++... ...+.++++.|+||++|.|+ ++|++++++++ ++.+... +... +
T Consensus 194 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--~~~l~~~--------------------------~~~~-~ 244 (356)
T 1fg7_A 194 ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV--INLLMKV--------------------------IAPY-P 244 (356)
T ss_dssp GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH--HHHHHHH--------------------------SCSS-C
T ss_pred CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH--HHHHHHh--------------------------cCCC-C
Confidence 222211 11245788999999997332 48999998887 2222110 0001 2
Q ss_pred hhHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYI--GHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~--g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~ 434 (609)
.+.... .++.+.+ .+.. ..+.+.++.+++++++.+.|++++++....+. ...++++.+ +
T Consensus 245 ~~~~~~-~a~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~-~------------- 305 (356)
T 1fg7_A 245 LSTPVA-DIAAQAL-SPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDS---ETNYILARF-K------------- 305 (356)
T ss_dssp SCHHHH-HHHHHHT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCC---SSSEEEEEE-T-------------
T ss_pred CCHHHH-HHHHHHh-cCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCC---CCeEEEEEC-C-------------
Confidence 222222 1222222 1111 15667778888899999999888765333332 233443333 2
Q ss_pred CCCCCCChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 435 ETDKPLHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 435 ~~~~~l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
+..++.+.|. ++||.+++ |..|. .++++||+++ +++|+++
T Consensus 306 ------~~~~l~~~L~-~~gI~v~~~g~~~~-----------------------------~~~~iRis~~---~~~e~~~ 346 (356)
T 1fg7_A 306 ------ASSAVFKSLW-DQGIILRDQNKQPS-----------------------------LSGCLRITVG---TREESQR 346 (356)
T ss_dssp ------THHHHHHHHH-HTTEECEECTTSTT-----------------------------CTTEEEEECC---CHHHHHH
T ss_pred ------CHHHHHHHHH-HCCEEEEECCCCCC-----------------------------CCCeEEEEeC---CHHHHHH
Confidence 2567888884 57999997 65543 1379999997 7899999
Q ss_pred HHHHHHHH
Q 038499 514 TLEALEFI 521 (609)
Q Consensus 514 ll~al~~v 521 (609)
++++|+++
T Consensus 347 ~~~~l~~~ 354 (356)
T 1fg7_A 347 VIDALRAE 354 (356)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99998753
No 120
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=7.7e-25 Score=236.66 Aligned_cols=313 Identities=17% Similarity=0.135 Sum_probs=212.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
+++.......++++.+++++|++ +.|+|+ +|+ ++++.++..+ +++|| .|+++...|++.
T Consensus 108 y~r~~~~~~~~l~~~lA~l~g~~--~~v~~~-sG~-~Ai~~al~~l---------------~~~Gd--~Vi~~~~~y~~~ 166 (445)
T 1qgn_A 108 YGRYGNPTTVVLEEKISALEGAE--STLLMA-SGM-CASTVMLLAL---------------VPAGG--HIVTTTDCYRKT 166 (445)
T ss_dssp BGGGCCHHHHHHHHHHHHHHTCS--EEEEES-CHH-HHHHHHHHHH---------------SCSSC--EEEEETTSCHHH
T ss_pred ccCCCChHHHHHHHHHHHHhCCC--cEEEeC-CHH-HHHHHHHHHH---------------hCCCC--EEEEcCCCchhH
Confidence 34444567889999999999986 366665 898 7888887765 37888 688888999887
Q ss_pred HHHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCc-eEEEEecccCccccccCHHHHHHHHHHhCCeEEEe
Q 038499 195 LLSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRP-ILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~-~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD 269 (609)
...+ +..|++++.++.+ |+++|+++|+ +++ ++|++++++||||.+.|+++|+++||+||+++|+|
T Consensus 167 ~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~-----~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD 236 (445)
T 1qgn_A 167 RIFIETILPKMGITATVIDPA-----DVGALELALN-----QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCID 236 (445)
T ss_dssp HHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHH-----HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-----cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence 6643 4579999999865 8999999998 478 99999999999999999999999999999999999
Q ss_pred ccccCCcccccCCCCCCCCccEEEEcCCCCCCCCC--CcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 270 FAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG--SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 270 ~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~--g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
++++.++..... . .++|+++.|+||++||++ ..|++++++++ ++.+.+.
T Consensus 237 ~a~~~~~~~~~~-~---~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l--~~~l~~~----------------------- 287 (445)
T 1qgn_A 237 GTFATPLNQKAL-A---LGADLVLHSATKFLGGHNDVLAGCISGPLKL--VSEIRNL----------------------- 287 (445)
T ss_dssp CTTTCTTTCCTT-T---TTCSEEEECTTTTTTCSSSCCCEEEEECHHH--HHHHHHH-----------------------
T ss_pred CCCcccccCCcc-c---cCCEEEEECCcccccccccceEEEEEECHHH--HHHHHHH-----------------------
Confidence 999877543222 2 278999999999999654 37999999887 2222110
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce-EEeCCCC-------------CCCcc
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI-KILGNTS-------------TKRQA 413 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i-~v~~~~~-------------~~r~~ 413 (609)
.+...++++...... ++. .........++..+.++++.+.|+++|++ ++..+.- ....+
T Consensus 288 --~~~~g~~~~~~~a~~-~~~----~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ 360 (445)
T 1qgn_A 288 --HHILGGALNPNAAYL-IIR----GMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGG 360 (445)
T ss_dssp --HHHHCCCCCHHHHHH-HHH----HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCS
T ss_pred --HHHhCCCCCHHHHHH-HHH----hHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCc
Confidence 001122222222111 111 11122333344555688888999999988 5665521 12567
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---hhhhhhcCCChhHHHHHHHHHhhCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---PYGHHLLDLDEAQSYQIRSAIQKGY 490 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p~~~~ll~i~~~~~~~~~~~~~~~~ 490 (609)
+++|.+.. .. -....+...| +.++|.++.|..|+- |.......+..+.-. .
T Consensus 361 ivsf~l~~-~~---------------~~~~~~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~ 414 (445)
T 1qgn_A 361 AVSFEVDG-DL---------------LTTAKFVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRA---------K 414 (445)
T ss_dssp EEEEEESS-CH---------------HHHHHHHHHC-SSSEECSCCCSSSCEEECHHHHHSTTSCHHHHH---------T
T ss_pred EEEEEECC-CH---------------HHHHHHHHhC-CCceEeccCCCCceeeecccccccccCCHHHHH---------h
Confidence 88888765 10 0133455544 346899999998862 211110011110000 1
Q ss_pred CCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 491 VGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 491 ~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.|+.++.||||++ .||++.+++.|+++++.
T Consensus 415 ~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 415 YGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp TTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 2344689999998 36899999999988753
No 121
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=1.2e-25 Score=242.07 Aligned_cols=334 Identities=15% Similarity=0.131 Sum_probs=221.1
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----C---CCCCCcEEEeCChHHHHHHHHHHHhc
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----G---GGQEDAMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g---~~~~~~vift~sGttaal~~l~~~l~ 161 (609)
.++.+.+++.+.+......... |..... ..++++.+++++ | .+++ +|++| +|+++++..++.++
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~--y~~~~g----~~~lr~~la~~l~~~~g~~~~~~~-~v~~t-~G~~~al~~~~~~l- 129 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQ--YSTTEG----DPVLKQQILKLLERMYGITGLDED-NLIFT-VGSQQALDLIGKLF- 129 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTS--CCCTTC----CHHHHHHHHHHHHHHHCCCSCCGG-GEEEE-EHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhhcchhhcC--CCCCCC----CHHHHHHHHHHHHhccCCCCCCcc-cEEEe-ccHHHHHHHHHHHh-
Confidence 5677888887776431000000 111111 344555566655 8 4555 89998 88888999888876
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhcc---CCCceEE-
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKD---AKRPILG- 237 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~---~~~~~lv- 237 (609)
+++|| .|++..+.|+++...++..|++++.++.++++ +|+++|++++++... ..+++++
T Consensus 130 --------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~ 192 (425)
T 1vp4_A 130 --------------LDDES--YCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIY 192 (425)
T ss_dssp --------------CCTTC--EEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred --------------CCCCC--EEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEE
Confidence 36888 69999999999998899899999999987765 899999999974100 0268887
Q ss_pred EEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEE
Q 038499 238 SFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGIL 309 (609)
Q Consensus 238 ~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L 309 (609)
++++++||||.+.| +++|+++|++||+++|+|++++.... ..++..+...+.++++.|++|++| |+ .+|++
T Consensus 193 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 271 (425)
T 1vp4_A 193 VVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMV 271 (425)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEE
T ss_pred ECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEE
Confidence 58999999999987 46789999999999999999876321 122211111245788999999998 53 47999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHH---hcCHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE---YIGHEVIKKQEET 386 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~---~~g~~~i~~~~~~ 386 (609)
++++++ ++.+... ......+++.+.+. ++.+++ .. ....+.+.++.++
T Consensus 272 ~~~~~~--~~~l~~~------------------------~~~~~~~~~~~~~~--a~~~~l-~~~~~~~~~~~~~~~~~~ 322 (425)
T 1vp4_A 272 AGSKEF--IRKIVQA------------------------KQSADLCSPAITHR--LAARYL-ERYDLLEQLKPTIELYRR 322 (425)
T ss_dssp ECCHHH--HHHHHHH------------------------HHHHHSSCCHHHHH--HHHHHH-HHSCHHHHTHHHHHHHHH
T ss_pred eeCHHH--HHHHHHH------------------------hhhhcCCCCHHHHH--HHHHHH-hcCCHHHHHHHHHHHHHH
Confidence 999877 2222110 00111222222222 122222 12 1224566677777
Q ss_pred HHHHHHHHhCC-CC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 387 YIERALERLLP-NQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 387 l~~~~~~~L~~-~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
.++++.+.|++ .| ++++..+. ...++++.+.. + .+...+.+.|.++ ||.+++|..
T Consensus 323 ~~~~l~~~L~~~~~~~~g~~~~~~~---~g~~~~~~~~~-~----------------~~~~~l~~~l~~~-gi~v~~g~~ 381 (425)
T 1vp4_A 323 KRTVMLNALEEYFSDIPGVKWVKSE---GGLFIWLTLPE-G----------------FDTWEMFEYAKRK-KVFYVPGRV 381 (425)
T ss_dssp HHHHHHHHHHHHSTTSTTCEECCCS---BSSEEEEECCT-T----------------CCTTTTHHHHHHH-TEECEEGGG
T ss_pred HHHHHHHHHHHhCCCCCceEEecCC---ccEEEEEEcCC-C----------------CCHHHHHHHHHHC-CCEEECchh
Confidence 88888888876 35 68876542 22344444332 1 2455678888776 999998876
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|.... ..++++||+++.. +++|+++++++|+++++..
T Consensus 382 f~~~~-------------------------~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~ 418 (425)
T 1vp4_A 382 FKVYD-------------------------EPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEY 418 (425)
T ss_dssp GCTTC-------------------------CCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred hcCCC-------------------------CCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 65210 0258999999874 8999999999999987654
No 122
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=5.9e-25 Score=232.22 Aligned_cols=298 Identities=14% Similarity=0.019 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHhC-CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc
Q 038499 123 VHEASNYIKKCLG-GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g-~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (609)
..++++.++++++ .+++ +|+++ +|+++++..++.++ +++|| .|++..+.|++....++..
T Consensus 65 ~~~l~~~la~~~~~~~~~-~v~~~-~g~~~a~~~~~~~l---------------~~~gd--~Vl~~~~~~~~~~~~~~~~ 125 (375)
T 3op7_A 65 SPAFKKSVSQLYTGVKPE-QILQT-NGATGANLLVLYSL---------------IEPGD--HVISLYPTYQQLYDIPKSL 125 (375)
T ss_dssp CHHHHHHHHTTSSSCCGG-GEEEE-SHHHHHHHHHHHHH---------------CCTTC--EEEEEESSCTHHHHHHHHT
T ss_pred hHHHHHHHHHHhccCChh-hEEEc-CChHHHHHHHHHHh---------------cCCCC--EEEEeCCCchhHHHHHHHc
Confidence 3578889999884 5665 89998 78888898888876 47888 6999999999998888999
Q ss_pred CceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc
Q 038499 202 LAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 202 G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
|++++.++++. ++.+|+++|+++++ ++++++++++++||||.+.| +++|.++|++||+++|+|++++...
T Consensus 126 g~~~~~v~~~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 126 GAEVDLWQIEEENGWLPDLEKLRQLIR-----PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp TCEEEEEEEEGGGTTEECHHHHHHHCC-----TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred CCEEEEEeccccCCCCCCHHHHHHhhc-----cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999874 44589999999998 68999999999999999999 9999999999999999999987643
Q ss_pred ccccCCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
.. ..... ...+.++++.|++|.+|.| .++|++++++++. +.+..... ....
T Consensus 201 ~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~--~~~~~~~~------------------------~~~~ 253 (375)
T 3op7_A 201 EL-DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVT--DILRDYRD------------------------YTMI 253 (375)
T ss_dssp SS-CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHH--HHHTTTGG------------------------GTTS
T ss_pred cc-CCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHH--HHHHHHHh------------------------hhcc
Confidence 22 11110 1124568889999999844 3479999988773 33321110 0111
Q ss_pred CChhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 355 GTPQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 355 gtp~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
+++.+.+.+ .+++.. .....+.++++.+++++++.+.|++++++.+..+. .+.+.|...+.+
T Consensus 254 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~---------- 316 (375)
T 3op7_A 254 CAGVFDDLVAQLALAH---YQEILERNRHILEENLAILDQWIEEEPLVSYIRPA----VVSTSFVKIAVD---------- 316 (375)
T ss_dssp CCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCS----SSSCEEEEECCS----------
T ss_pred CCCcHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC----CeEEEeEEcCCC----------
Confidence 122222221 122211 11234566667778888899999888899887552 233333333301
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
.+..++++.|.+++||.+++|..|.. ++++|++++. +.++++.
T Consensus 317 ------~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------------~~~iRi~~~~--~~~~i~~ 359 (375)
T 3op7_A 317 ------MPMEDFCLQLLQEHGVLLVPGNRFER-----------------------------DGYVRLGFAC--EQETLIK 359 (375)
T ss_dssp ------SCHHHHHHHHHHHHCEECEEGGGGTC-----------------------------TTEEEECCCS--CHHHHHH
T ss_pred ------CCHHHHHHHHHHhCCEEEeChhhhCC-----------------------------CCeEEEEecC--CHHHHHH
Confidence 35677888776567999998876541 4899999874 5589999
Q ss_pred HHHHHHHHHHhc
Q 038499 514 TLEALEFIAIYG 525 (609)
Q Consensus 514 ll~al~~v~~~~ 525 (609)
++++|+++++..
T Consensus 360 ~l~~l~~~l~~~ 371 (375)
T 3op7_A 360 GLEKLSQFLRRF 371 (375)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 123
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.93 E-value=8.3e-25 Score=236.22 Aligned_cols=361 Identities=12% Similarity=0.042 Sum_probs=231.2
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccC-CCCCC--chhhHHHHHHHHHHHHHHHHHhC--------CCCCCcEEEe
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGN-THTCD--SYVGQHTTNMVHEASNYIKKCLG--------GGQEDAMIFC 145 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n-~~~~~--~~~~~~~~~~~~e~r~~ia~~~g--------~~~~~~vift 145 (609)
..+.+..+.+..+.+.+.+++.+......-. .+... ...++.......++++.++++++ ++++ +|++|
T Consensus 39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-~v~~~ 117 (435)
T 3piu_A 39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-HLVLT 117 (435)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-GEEEE
T ss_pred CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-HEEEc
Confidence 4678888777777888888887654321100 00000 00111111223567777777776 5555 89998
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-HcCceEEEEecCCC--CCCCHHHHH
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-QSLAEVVEIGLDDD--GLLDIEALR 222 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~~--g~ld~e~L~ 222 (609)
+|+++++..++.++ +++|| .|+++.+.|++....++ ..|++++.++.+++ ..+|+++|+
T Consensus 118 -~gg~~a~~~~~~~l---------------~~~gd--~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 179 (435)
T 3piu_A 118 -AGATSANETFIFCL---------------ADPGE--AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALE 179 (435)
T ss_dssp -EHHHHHHHHHHHHH---------------CCTTC--EEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHH
T ss_pred -CChHHHHHHHHHHh---------------cCCCC--eEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHH
Confidence 78888898888876 37888 69999999999888877 68999999998763 468999999
Q ss_pred HHHhhhcc-CCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCC--------
Q 038499 223 SKLELYKD-AKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQT-------- 286 (609)
Q Consensus 223 ~al~~~~~-~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~-------- 286 (609)
+++++... ..++++|++++++||||.+.+. ++|+++|++||+++|+|++++.... ...+.....
T Consensus 180 ~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~ 259 (435)
T 3piu_A 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENS 259 (435)
T ss_dssp HHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------
T ss_pred HHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccccccccc
Confidence 99974221 1378999999999999999875 6788899999999999999875211 111111000
Q ss_pred --CCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-
Q 038499 287 --DGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM- 362 (609)
Q Consensus 287 --~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~- 362 (609)
.+.++++.|+||++|.| .++|+++++++.+ .+.+... ... .+.+...+.
T Consensus 260 ~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~-~~~~~~~-------------------------~~~-~~~~~~~~~~ 312 (435)
T 3piu_A 260 EVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMV-VAAATKM-------------------------SSF-GLVSSQTQHL 312 (435)
T ss_dssp CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHH-HHHHHHH-------------------------GGG-SCCCHHHHHH
T ss_pred CCCCCEEEEEeeecccCCCceeEEEEEeCCHHH-HHHHHHH-------------------------hhc-CCCCHHHHHH
Confidence 12238889999999733 3589999954431 1111000 001 111222222
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCCh
Q 038499 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442 (609)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 442 (609)
+.+.+.-...-....+.++++.+++++++.+.|.++ ++++..+ ..+++.+...+.... .......
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~l~~~~~----------~~~~~~~ 377 (435)
T 3piu_A 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNG----NAGLFCWVDMRHLLR----------SNTFEAE 377 (435)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCC----CSSSEEEEECGGGSS----------SSSHHHH
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCC----CeeEEEEEEcccccc----------cCCchhH
Confidence 122221100001123566777888888999999887 7887754 233444444330110 0000024
Q ss_pred HHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 443 ~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..+++.|.+++||.+++|..|... .++++||+++.. ++++++.++++|++++
T Consensus 378 ~~~~~~l~~~~gi~v~~g~~~~~~---------------------------~~~~iRi~~~~~-~~e~i~~~l~~l~~~l 429 (435)
T 3piu_A 378 MELWKKIVYEVHLNISPGSSCHCT---------------------------EPGWFRVCFANL-PERTLDLAMQRLKAFV 429 (435)
T ss_dssp HHHHHHHHHTSCEECEEGGGGTCS---------------------------STTEEEEECSSS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCcccCCC---------------------------CCCEEEEEeeCC-CHHHHHHHHHHHHHHH
Confidence 577788877779999988776521 258999999766 9999999999999988
Q ss_pred Hhcc
Q 038499 523 IYGQ 526 (609)
Q Consensus 523 ~~~~ 526 (609)
+...
T Consensus 430 ~~~~ 433 (435)
T 3piu_A 430 GEYY 433 (435)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7643
No 124
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=6.2e-25 Score=232.00 Aligned_cols=332 Identities=13% Similarity=0.038 Sum_probs=222.5
Q ss_pred eEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--GQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~~~~~vift~sGttaal~ 154 (609)
++.|+.+... +.|+.|.+++.+.+......+.. .+..++++++.+++++.+|. +++ +|++| +|+++++.
T Consensus 25 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~------~g~~~lr~~la~~l~~~~g~~~~~~-~i~~t-~g~~~al~ 96 (376)
T 3ezs_A 25 GLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKS------AFEESLRAAQRGFFKRRFKIELKEN-ELIST-LGSREVLF 96 (376)
T ss_dssp CCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCT------TCCHHHHHHHHHHHHHHHSCCCCGG-GEEEE-SSSHHHHH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCHH-HEEEC-cCcHHHHH
Confidence 4444433322 35678888887766322111111 11245556666666666687 554 89998 77888899
Q ss_pred HHHHHhcccchhhHHHHHHhhhcC--CCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRD--EERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~--gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
.++..+ .++ || .|++..+.|+++...++..|++++.++.++++.+++ +|++++. +
T Consensus 97 ~~~~~~---------------~~~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-----~ 153 (376)
T 3ezs_A 97 NFPSFV---------------LFDYQNP--TIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-----Q 153 (376)
T ss_dssp HHHHHH---------------TTTCSSC--EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-----H
T ss_pred HHHHHH---------------cCCCCCC--EEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-----c
Confidence 888776 367 78 699999999999988999999999999987655565 7777776 4
Q ss_pred CceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc---ccCCCC------CCCCccEEEEcCCCCC
Q 038499 233 RPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE---IDVRSG------QTDGYDAIFLSTHKFL 300 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~---id~~~~------~~~~~D~v~~S~hK~l 300 (609)
+++++++++++||||.+.| +++|+++|++||+++|+|++++..... ..+... ...+.++++.|+||++
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 233 (376)
T 3ezs_A 154 EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS 233 (376)
T ss_dssp HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT
T ss_pred CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc
Confidence 6889999999999999988 556778899999999999998763221 111000 0135679999999999
Q ss_pred CCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 301 GGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 301 ggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
|.| .++|+++.++++. +.+... ......+++......+. +.+ ......+.
T Consensus 234 g~~G~r~G~~~~~~~~~--~~~~~~-------------------------~~~~~~~~~~~~~~a~~-~~l-~~~~~~~~ 284 (376)
T 3ezs_A 234 SAPGLRSGFIAGDSRLL--EKYKAF-------------------------RAYLGYTSANAIQKASE-AAW-LDDRHAEF 284 (376)
T ss_dssp TCGGGCCEEEEECHHHH--HHHHHH-------------------------HTTTCCCCCHHHHHHHH-HHH-HCSHHHHH
T ss_pred CCccceeEEEeeCHHHH--HHHHHH-------------------------HhhhcCCCChHHHHHHH-HHH-hCcHHHHH
Confidence 733 3589999988872 222110 00111222322222211 111 12223577
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
+.++.+++++++.+.|+ ++. . +..+.+.+...+ +...+.+.|.+++||.+++
T Consensus 285 ~~~~~~~~~~~l~~~l~---~~~--~----~~~~~~~~~~~~-------------------~~~~~~~~l~~~~gi~v~~ 336 (376)
T 3ezs_A 285 FRNIYANNLKLARKIFK---NTL--I----YPYSFYVYLPVQ-------------------NGENFAKTLYQNEGIITLP 336 (376)
T ss_dssp HHHHHHHHHHHHHHHST---TCC--C----CSBSSEEEEECS-------------------CHHHHHHHHHHHHCCBCEE
T ss_pred HHHHHHHHHHHHHHHhc---CCC--C----CCcceEEEEECC-------------------CHHHHHHHHHHhCCEEEeC
Confidence 78888888999999887 333 1 233444444333 3567888887657999999
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|..|..+. ..++++||+++. +++|++.++++|++++++
T Consensus 337 g~~~~~~~-------------------------~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 337 ALYLGRNR-------------------------IGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp GGGGCSTT-------------------------TTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred cHHhCCCC-------------------------CCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 98776210 025899999974 999999999999988753
No 125
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=8e-25 Score=234.28 Aligned_cols=343 Identities=16% Similarity=0.123 Sum_probs=218.7
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAV 164 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (609)
.+.++.|.+++.+.+...+ ++++...+........+.+.+++.+++++|++++ +|+++ +|+ +++..++.++
T Consensus 35 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~~-sGt-~a~~~~~~~~---- 107 (417)
T 3n0l_A 35 NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA-NVQPN-SGS-QANQGVYAAL---- 107 (417)
T ss_dssp CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCS-SHH-HHHHHHHHHH----
T ss_pred CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc-ceEec-cHH-HHHHHHHHHh----
Confidence 3457889999988775444 3333221111223345566788899999999765 67665 885 6788877766
Q ss_pred hhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HH--cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEE
Q 038499 165 PSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQ--SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~--~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
+++|| .|++..++|+++...+ .. .+..++.++.+.++.+|+++|++++++ ++++++++
T Consensus 108 -----------~~~gd--~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~~v~~ 170 (417)
T 3n0l_A 108 -----------INPGD--KILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK----EKPKLIVC 170 (417)
T ss_dssp -----------SCTTC--EEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH----HCCSEEEE
T ss_pred -----------cCCCC--EEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh----cCCeEEEE
Confidence 47898 6999999998765522 22 345567777777788999999999984 37888888
Q ss_pred ecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEe-chhhcc
Q 038499 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMT-KALYQL 318 (609)
Q Consensus 240 s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~-~~~~~l 318 (609)
++++| |.+.|+++|.++|++||+++|+|++|+.+....+.......+.|++++|+||+++||.| |+++++ +++.
T Consensus 171 ~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~-- 245 (417)
T 3n0l_A 171 GASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELA-- 245 (417)
T ss_dssp CCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC-EEEEESCHHHH--
T ss_pred CCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe-eEEEECCHHHH--
Confidence 87765 99999999999999999999999998654432221111112569999999999988875 999998 4552
Q ss_pred CCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC
Q 038499 319 GSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN 398 (609)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~ 398 (609)
+.+.+.... ...++++......++.++......+.+.+.++..++++++.+.|.+
T Consensus 246 ~~~~~~~~~------------------------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 300 (417)
T 3n0l_A 246 KKINSAIFP------------------------GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD- 300 (417)
T ss_dssp HHHHHHHTT------------------------TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHhhhhCC------------------------cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-
Confidence 222111000 0123444333332222222111234567788888889999999987
Q ss_pred CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhH
Q 038499 399 QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQ 478 (609)
Q Consensus 399 p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~ 478 (609)
.++++.... ....++++.+.+ . .++..++.+.|. +.||.++.+.....+.. .
T Consensus 301 ~g~~~~~~~--~~~~~~~~~~~~-~---------------~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~-~-------- 352 (417)
T 3n0l_A 301 RKFKLVSDG--TDNHLVLMSFLD-R---------------EFSGKDADLALG-NAGITANKNTVPGEIRS-P-------- 352 (417)
T ss_dssp TTCEEGGGS--CSSSEEEEECTT-S---------------SSCHHHHHHHHH-HTTEECEECCCTTCCSC-T--------
T ss_pred CCceeccCC--CCceEEEEEccc-C---------------CCCHHHHHHHHH-HcCeEEeccccCCCCcc-c--------
Confidence 588887531 123344444433 1 146778888885 46999986542211000 0
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHhc
Q 038499 479 SYQIRSAIQKGYVGVKPGWTRISFPYY----MSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 479 ~~~~~~~~~~~~~~~~~g~iRls~~~~----~t~eeid~ll~al~~v~~~~ 525 (609)
..+..+|++++.. .+++|+++++++|+++++..
T Consensus 353 --------------~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 353 --------------FITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp --------------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred --------------CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 0246799987533 57999999999999998653
No 126
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.93 E-value=1.4e-24 Score=235.21 Aligned_cols=344 Identities=12% Similarity=0.026 Sum_probs=227.5
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCCCCCcEEEeCChHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~~~~~vift~sGtta 151 (609)
+++.|..+..+ +.++.|.+++.+.+.....+.....| .......++++.+++++ +.+++ +|+++ +|+++
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y----~~~~g~~~lr~~ia~~~~~g~~~~~~-~i~~t-~G~~~ 143 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGY----GAEQGQGALREAVASTFYGHAGRAAD-EIFIS-DGSKC 143 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCS----TTTTCCHHHHHHHHHHHHTTTTCCGG-GEEEE-SCHHH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCC----CCCCCcHHHHHHHHHHHHcCCCCCHH-HEEEc-cCHHH
Confidence 56777666443 46778999998887654322221111 11123567888888887 66666 89998 88888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce----------EEEEecCCCCCCCHHHH
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE----------VVEIGLDDDGLLDIEAL 221 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~----------vv~v~~~~~g~ld~e~L 221 (609)
++..+ ..+ +++|| .|+++.+.|+++...++..|++ ++.++++.++.++.+ +
T Consensus 144 al~~~-~~l---------------~~~gd--~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 204 (449)
T 3qgu_A 144 DIARI-QMM---------------FGSKP--TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPD-L 204 (449)
T ss_dssp HHHHH-HHH---------------HCSSS--CEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCC-G
T ss_pred HHHHH-HHH---------------hCCCC--EEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCC-h
Confidence 89887 444 37888 5999999999999999999998 999998764323222 1
Q ss_pred HHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC----cccccCCCCC-CCCccEEE
Q 038499 222 RSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP----YVEIDVRSGQ-TDGYDAIF 293 (609)
Q Consensus 222 ~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~----~~~id~~~~~-~~~~D~v~ 293 (609)
.+. ++++++++++++||||.+.+ +++|+++|++||+++|+|++++.. ..+..+.... ..+.++++
T Consensus 205 ----~~~---~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (449)
T 3qgu_A 205 ----SKA---KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIET 277 (449)
T ss_dssp ----GGC---CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEE
T ss_pred ----hHc---CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEE
Confidence 111 47889999999999999987 677888899999999999998752 2222332221 12457899
Q ss_pred EcCCCCCCC-CCCcEEEEEechhhccCC-CCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 294 LSTHKFLGG-PGSPGILLMTKALYQLGS-FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 294 ~S~hK~lgg-p~g~G~L~~~~~~~~l~~-~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
.|++|++|. ..++|++++++++ ++. ..+. ...+.. .......+++...... +++.+.
T Consensus 278 ~s~sK~~g~~G~r~G~~~~~~~~--~~~~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~a-~~~~l~ 336 (449)
T 3qgu_A 278 CSFSKYAGFTGVRLGWTVVPKAL--KYANGEPV-----------------HADWNR-VMTTCFNGASNIVQAG-GLACLQ 336 (449)
T ss_dssp EECSGGGTCTTCCCEEEECCTTC--BCTTSCBH-----------------HHHHHH-HHHHSCCCCCHHHHHH-HHHHTS
T ss_pred ecchhhcCCccceeEEEecCHHH--HhhhhhhH-----------------HHHHHH-HhhcccCCCCHHHHHH-HHHHHh
Confidence 999999983 3458999998887 332 0000 000000 0111122223222222 112211
Q ss_pred H-HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 372 K-EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 372 ~-~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
. .....+.+.++.+++++++.+.|+++ ++++..+. ...++++.+.. .+..++++.|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~~~~~~------------------~~~~~~~~~l~ 394 (449)
T 3qgu_A 337 PEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGD---DAPYIWVGFPG------------------KPSWDVFAEIL 394 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESS---SSSEEEEECTT------------------SCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCC---CeeEEEEECCC------------------CCHHHHHHHHH
Confidence 1 12235677888888999999999887 77777552 23344333322 35778888887
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++||.+++|..|... .++++|||+. .++++++.++++|++++++
T Consensus 395 ~~~gI~v~pg~~f~~~---------------------------~~~~iRis~~--~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 395 ERCNIVTTPGSGYGPA---------------------------GEGFVRASAF--GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp HHHCEECEEGGGGCGG---------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHHC-
T ss_pred HHCCEEEecchHhCCC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 7779999999877621 1589999964 5999999999999998754
No 127
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.93 E-value=2.7e-24 Score=225.12 Aligned_cols=319 Identities=13% Similarity=0.061 Sum_probs=220.7
Q ss_pred ceEEecCCCC-CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 77 RLTYADHTAS-GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 77 ~~vyld~~a~-g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
.++.|..+.. -+.++.+.+++.+.+...+.++... ..++|+++++++|++++ +|++| +|+++++..
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~-~i~~t-~g~~~al~~ 82 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPD-----------AGTLRQMLAKRNSVDNN-AILVT-NGPTAAFYQ 82 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTT-----------CHHHHHHHHHHTTCCGG-GEEEE-SHHHHHHHH
T ss_pred cEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCc-----------HHHHHHHHHHHhCcCHH-HEEEc-CCHHHHHHH
Confidence 4556654432 3456788898888774333333221 14689999999999876 89998 889989999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec-CCCCCCCHHHHHHHHhhhccCCCc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL-DDDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
++..+ . || .|+++.+.|+++...++..|++++.++. ++.+.+++ +++
T Consensus 83 ~~~~l----------------~-gd--~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-------------~~~ 130 (350)
T 3fkd_A 83 IAQAF----------------R-GS--RSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF-------------SNM 130 (350)
T ss_dssp HHHHT----------------T-TC--EEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC-------------TTC
T ss_pred HHHHH----------------C-CC--EEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc-------------CCC
Confidence 88765 3 77 6999999999999899999999999998 65444443 368
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHhC-CeEEEeccccCCcccccC--CCCCCCCccEEEEcCCCCCCCC-CCcEEEE
Q 038499 235 ILGSFSACSNVTGIYSDTRSIARLLHQYG-GFACFDFAASGPYVEIDV--RSGQTDGYDAIFLSTHKFLGGP-GSPGILL 310 (609)
Q Consensus 235 ~lv~~s~~sn~TG~~~dl~~I~~la~~~g-~~vivD~A~~~~~~~id~--~~~~~~~~D~v~~S~hK~lggp-~g~G~L~ 310 (609)
+++++++++||||.+.|.++|.++++.++ .++|+|++++........ ......+.++++.|++|++|.| .++|+++
T Consensus 131 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~ 210 (350)
T 3fkd_A 131 DFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIV 210 (350)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEE
T ss_pred CEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEE
Confidence 89999999999999999999999999876 799999998643221110 1111124568899999999833 4589999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYI-GHEVIKKQEETYIE 389 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~-g~~~i~~~~~~l~~ 389 (609)
+++++. +.+.... ...+++..... ++.+++ .+.. ..+.+.+.. ++++
T Consensus 211 ~~~~~~--~~~~~~~---------------------------~~~~~~~~~~~-~~~~~l-~~~~~~~~~~~~~~-~~~~ 258 (350)
T 3fkd_A 211 ANKDFM--KRVAAFS---------------------------TPWAVNALAIE-AAKFIL-IHPAQFTLPIRKWQ-RNTV 258 (350)
T ss_dssp CCHHHH--HHHHTTC---------------------------CTTCSCHHHHH-HHHHHH-HCTTTTCCCHHHHH-HHHH
T ss_pred eCHHHH--HHHHHhC---------------------------CCCCCCHHHHH-HHHHHH-hCHHHHHHHHHHHH-HHHH
Confidence 988772 2221110 01122322221 122222 2221 123344443 7788
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|+++|++++..+ ..+++++.+.. .+...+.+.|.+++||.+++|..|.+.
T Consensus 259 ~l~~~L~~~~~~~~~~~----~~~~~~~~~~~------------------~~~~~l~~~L~~~~gi~v~~g~~f~~~--- 313 (350)
T 3fkd_A 259 DFITALNRLDGVEVHPS----GTTFFLLRLKK------------------GTAAELKKYMLEEYNMLIRDASNFRGL--- 313 (350)
T ss_dssp HHHHHHHHSTTEEECCC----SSSEEEEEESS------------------SCHHHHHHHHHHTTCEECEECTTSTTC---
T ss_pred HHHHHHhcCCCcEECCC----CCcEEEEECCC------------------CCHHHHHHHHHHHCCEEEEeCccCCCC---
Confidence 88899988889988643 33444444433 146788888876479999999877521
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|||++ +++|+++++++|+.+.+.
T Consensus 314 ------------------------~~~~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 314 ------------------------DESYVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp ------------------------CTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred ------------------------CCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 2589999987 899999999999998754
No 128
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1.5e-25 Score=243.09 Aligned_cols=283 Identities=14% Similarity=0.093 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++++++ +|++ ++++++ +|+++++..++.++ +++|| .|+++..+|+++..++..
T Consensus 57 ~~~~~~~~~la~-~g~~--~~v~~~-~G~t~a~~~~~~a~---------------~~~gd--~Vlv~~~~h~s~~~~~~~ 115 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY--DGYFLV-NGTTSGILSVIQSF---------------SQKKG--DILMARNVHKSVLHALDI 115 (446)
T ss_dssp SHHHHHHHHHCS-CTTE--EEEEES-SHHHHHHHHHHHTT---------------TTSSS--CEEECTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHh-cCCC--ceEEEe-CCHHHHHHHHHHHh---------------cCCCC--EEEEecCccHHHHHHHHH
Confidence 356889999999 9987 378887 88888898887765 37888 699999999999999999
Q ss_pred cCceEEEEec--CCC----CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 201 SLAEVVEIGL--DDD----GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 201 ~G~~vv~v~~--~~~----g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
.|++++.++. +++ +.+|+++| +. ++++++++++ +|+||.+.|+++|+++||+||+++++|+|++.
T Consensus 116 ~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~-----~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~ 186 (446)
T 2x3l_A 116 SQQEGHFIETHQSPLTNHYNKVNLSRL---NN-----DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA 186 (446)
T ss_dssp HTCCEEECEEEECTTTSSEEEEEC---------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT
T ss_pred cCCeEEEEeCeeccccCcCCCCCHHHH---cC-----CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh
Confidence 9999999988 654 56788887 33 5789999999 66799999999999999999999999999886
Q ss_pred Ccc-----cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 275 PYV-----EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 275 ~~~-----~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
+. +.+.... ++|+++.|+||+++|+.|+|++++++++ ++ ..+... ..
T Consensus 187 -~~~f~~~~~~~~~~---g~Di~~~S~~K~l~~~~g~g~l~~~~~~--i~-~~~~~~---------------------~~ 238 (446)
T 2x3l_A 187 -HFGLQGFPDSTLNY---QADYVVQSFHKTLPALTMGSVLYIHKNA--PY-RENIIE---------------------YL 238 (446)
T ss_dssp -TTTSTTSCCCGGGG---TCSEEEECHHHHSSSCTTCEEEEEETTC--TT-HHHHHH---------------------HH
T ss_pred -hhccCCCCCChHHc---CCCEEEECCccccccccccEEEEEcCCc--CC-HHHHHH---------------------HH
Confidence 33 2233222 6799999999988888889999999887 22 111100 01
Q ss_pred ccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCc
Q 038499 350 ERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 350 ~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
..+..++++..... .+++.++ +..|.+.+.++.+++++++++. +++++++.+ ...+++.+.+
T Consensus 239 ~~~~~~s~~~~~~aal~~a~~~l--~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~---~~~l~i~~~~------ 302 (446)
T 2x3l_A 239 SYFQTSSPSYLIMASLESAAQFY--KTYDSTLFFAKRAQLIECLENK-----GFEMLQVDD---PLKLLIKYEG------ 302 (446)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSS---TTEEEEECTT------
T ss_pred HHHcCCCchHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCC---CeEEEEEeCC------
Confidence 23345666665543 3334443 4556666788888888888887 677776531 1234444432
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEec-cCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCC
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQAR-GGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYM 506 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~-~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~ 506 (609)
++...+.+.|.++ ||.++ +| .+++|++++.++
T Consensus 303 ------------~~~~~l~~~L~~~-GI~v~~~g----------------------------------~~~iRi~~~~~~ 335 (446)
T 2x3l_A 303 ------------FTGHDIQNWFMNA-HIYLELAD----------------------------------DYQALAILPLWH 335 (446)
T ss_dssp ------------SCHHHHHHHHHHT-TEEESEEC----------------------------------SSCEEEECCCCC
T ss_pred ------------cCHHHHHHHHHHC-CCEEEecC----------------------------------CCEEEEEeecCC
Confidence 4678899999776 99987 22 268999999999
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 038499 507 SNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 507 t~eeid~ll~al~~v~~~~ 525 (609)
|++|+ +++++|+++.+..
T Consensus 336 t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 336 HDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp TTCCC-CHHHHHHHHHTCC
T ss_pred CHHHH-HHHHHHHHHHHhh
Confidence 99999 9999999998654
No 129
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.93 E-value=3.5e-24 Score=230.70 Aligned_cols=313 Identities=15% Similarity=0.095 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHhCCCC--------CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc
Q 038499 120 TNMVHEASNYIKKCLGGGQ--------EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH 191 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~--------~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h 191 (609)
.++++.+.+++++..|.+. .++|++| +|+++++..++.++ +++|| .|++..+.|
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t-~G~~~al~~~~~~l---------------~~~gd--~Vlv~~p~y 142 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVT-SGSQQGLCKVFEMI---------------INPGD--NVLLDEPAY 142 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEE-SSHHHHHHHHHHHH---------------CCTTC--EEEEESSCC
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEe-CcHHHHHHHHHHHh---------------CCCCC--EEEEeCCCc
Confidence 3566677777777778764 2489998 88888999998887 37888 699999999
Q ss_pred cchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc-------cCCCceEEEE-ecccCccccccCHH---HHHHHHH
Q 038499 192 HSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK-------DAKRPILGSF-SACSNVTGIYSDTR---SIARLLH 260 (609)
Q Consensus 192 ~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~-------~~~~~~lv~~-s~~sn~TG~~~dl~---~I~~la~ 260 (609)
+++...++..|++++.++.++++ +|+++|++++++.. ..++++++++ ++++||||.+.+.+ +|+++|+
T Consensus 143 ~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~ 221 (425)
T 2r2n_A 143 SGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELAR 221 (425)
T ss_dssp HHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHH
Confidence 99998899999999999987665 89999999997311 0135787765 79999999999866 8999999
Q ss_pred HhCCeEEEeccccC----CcccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCCCCccCCCceEeec
Q 038499 261 QYGGFACFDFAASG----PYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVN 335 (609)
Q Consensus 261 ~~g~~vivD~A~~~----~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~ 335 (609)
+||+++|+|++++. +....++..+...+.++++.|++|+++ |+ .+|++++++++ ++.+...
T Consensus 222 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l--~~~l~~~----------- 287 (425)
T 2r2n_A 222 KYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPL--IERVILH----------- 287 (425)
T ss_dssp HTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHH--HHHHHHH-----------
T ss_pred HcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHH--HHHHHHH-----------
Confidence 99999999999863 222233333322345788999999997 53 48999999887 2222110
Q ss_pred ccccccccccccccccccCCChhHHHHH-HHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHhCC-CCce-EEeCCCCCC
Q 038499 336 GFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKE--YIGHEVIKKQEETYIERALERLLP-NQNI-KILGNTSTK 410 (609)
Q Consensus 336 ~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~--~~g~~~i~~~~~~l~~~~~~~L~~-~p~i-~v~~~~~~~ 410 (609)
......+.+.+.+.+ .+++..+..+ ....+.+.++.++.++++.+.|++ +|++ .+..+
T Consensus 288 -------------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p---- 350 (425)
T 2r2n_A 288 -------------IQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP---- 350 (425)
T ss_dssp -------------HHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC----
T ss_pred -------------HHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC----
Confidence 000111222232221 2222211000 122456667777888888888876 5776 34433
Q ss_pred CcceEEEEeccCCCCCcCCCCCCCCCCCCCChHH-HHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 411 RQAILSFNIHSSTINSSLGENTKTETDKPLHGPF-VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 411 r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~-v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
..+++.+...+ .. .+..+ +.+.|. +.||.+++|..|..+...
T Consensus 351 ~~g~~~~~~~~-~~---------------~~~~~~~~~~l~-~~gv~v~pg~~f~~~~~~-------------------- 393 (425)
T 2r2n_A 351 AAGMFLWIKVK-GI---------------NDVKELIEEKAV-KMGVLMLPGNAFYVDSSA-------------------- 393 (425)
T ss_dssp SBSSEEEEEET-TC---------------SCCHHHHHTHHH-HTTEECEEGGGGSSSTTS--------------------
T ss_pred CceEEEEEEeC-CC---------------CCHHHHHHHHHH-HCCcEEechhhhcCCCCC--------------------
Confidence 34555444443 11 23344 567775 469999998877532100
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+++|||++. .++++++.++++|++++++
T Consensus 394 ----~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 394 ----PSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp ----CCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 14899999984 5999999999999988764
No 130
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=1.9e-25 Score=241.77 Aligned_cols=358 Identities=13% Similarity=0.023 Sum_probs=213.5
Q ss_pred ceE-EecCCCCCCChHHHHHHHHHhhcCCccC-------CCCCCchhhHHHHHHHHHHHHHHHHHh------CCCCCCcE
Q 038499 77 RLT-YADHTASGRSLRYIENYIINNVLPFYGN-------THTCDSYVGQHTTNMVHEASNYIKKCL------GGGQEDAM 142 (609)
Q Consensus 77 ~~v-yld~~a~g~~~~~v~~ai~~~~~~~~~n-------~~~~~~~~~~~~~~~~~e~r~~ia~~~------g~~~~~~v 142 (609)
+++ +|.++.... ++.+.+++.+.+...+.+ ++...+..++.......++|+.+++++ +++++ +|
T Consensus 32 ~~i~~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i 109 (444)
T 3if2_A 32 QPVNMLGGGNPAK-IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE-NI 109 (444)
T ss_dssp SCCEECSCCCCCC-CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GE
T ss_pred hhhhccCCCCCCc-ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH-HE
Confidence 466 777665443 445556665555554445 320001112222222455666666665 45665 89
Q ss_pred EEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC------------ceEEEEC-CCCccchHHH------HHHcCc
Q 038499 143 IFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE------------RWVVFVG-PHEHHSNLLS------WRQSLA 203 (609)
Q Consensus 143 ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd------------~~~Vlv~-~~~h~s~~~~------~~~~G~ 203 (609)
+|| +|++++++.++.++. ++|| ...|+++ .++|+.+... +...|.
T Consensus 110 ~~t-~G~t~al~~~~~~l~---------------~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~ 173 (444)
T 3if2_A 110 ALT-NGSQNAFFYLFNLFG---------------GAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP 173 (444)
T ss_dssp EEE-SSHHHHHHHHHHHSS---------------EEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCC
T ss_pred EEe-cCcHHHHHHHHHHHh---------------CCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCc
Confidence 999 788889999888763 4554 0135554 7788776543 234578
Q ss_pred eEEEEecCC-CC----CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC
Q 038499 204 EVVEIGLDD-DG----LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 204 ~vv~v~~~~-~g----~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~ 275 (609)
.++.++.+. +| .+|+++|++++.+. .++++++++++++||||.+.| +++|+++|++||+++|+|++++.+
T Consensus 174 ~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~ 251 (444)
T 3if2_A 174 HIDEVTHDGEEGFFKYRVDFEALENLPALK--EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP 251 (444)
T ss_dssp EEEEEEETTEEEEEEEECCHHHHHTCHHHH--TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT
T ss_pred eEEecccccccCccccCCCHHHHHHHHHhc--CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc
Confidence 888888875 33 68999999884210 068999999999999999999 788999999999999999998754
Q ss_pred cccccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEIDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
......... ...+.++++.|+||++++..++|++++++++. +.+... .....
T Consensus 252 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~--~~~~~~------------------------~~~~~ 305 (444)
T 3if2_A 252 FPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVI--EAVSAM------------------------NAVVN 305 (444)
T ss_dssp TTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHH--HHHHHH------------------------HHHHH
T ss_pred ccccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHH--HHHHHH------------------------HHhcc
Confidence 322221111 11356899999999843334689999888872 222111 00011
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhCC-CC--ceEEeCCCCCCCcceEEEEeccCCCC
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGH-----EVIKKQEETYIERALERLLP-NQ--NIKILGNTSTKRQAILSFNIHSSTIN 425 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~-----~~i~~~~~~l~~~~~~~L~~-~p--~i~v~~~~~~~r~~~~~f~~~~~~~~ 425 (609)
.+++.+.+.+. ..++ +.... +.+.++.++.++.+.+.|.+ ++ ++.+..+. .+.+.+...+ ..
T Consensus 306 ~~~~~~~~~a~--~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~g~~~~~~~~-~~- 375 (444)
T 3if2_A 306 LAPTRFGAAIA--TPLV--ANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE----GAIFLWLWFK-DL- 375 (444)
T ss_dssp SSCCCHHHHHH--HHHH--HTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC----BSSEEEEEET-TC-
T ss_pred CCCChHHHHHH--HHHH--HcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC----ccEEEEEEcC-CC-
Confidence 11222222111 1111 11101 11333344444444444432 23 46666542 2344443333 10
Q ss_pred CcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC
Q 038499 426 SSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY 505 (609)
Q Consensus 426 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~ 505 (609)
.++...+++.|.+ .||.+++|..|........ . ...++++|||++.
T Consensus 376 -------------~~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~~---~----------------~~~~~~iRis~~~- 421 (444)
T 3if2_A 376 -------------PISTLDLYERLKA-KGTLIVPSEYFFPGVDVSD---Y----------------QHAHECIRMSIAA- 421 (444)
T ss_dssp -------------SSCHHHHHHHHHH-TTEECEEGGGSCTTCCCTT---C----------------SGGGSEEEEESSS-
T ss_pred -------------CCCHHHHHHHHHH-CCeEEecchhhcCCCCCcc---c----------------ccCCCeEEEEEeC-
Confidence 1467888888854 6999999988862100000 0 0013799999986
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 038499 506 MSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 506 ~t~eeid~ll~al~~v~~~~ 525 (609)
++++++.++++|+++++..
T Consensus 422 -~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 422 -DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp -CHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988754
No 131
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.93 E-value=6.8e-25 Score=234.93 Aligned_cols=342 Identities=16% Similarity=0.152 Sum_probs=213.5
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHH-HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQH-TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~-~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+.++.|.+++.+.+...+ ++++.. ++.+.. .....+.+++++++++|.+++ .|+++ +|+. ++..++..+
T Consensus 40 n~~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~-~v~~~-sGs~-a~~~a~~~~--- 112 (420)
T 3gbx_A 40 NYTSPRVMQAQGSQLTNKYAEGYPGKR-YYGGCEYVDVVEQLAIDRAKELFGADYA-NVQPH-SGSQ-ANFAVYTAL--- 112 (420)
T ss_dssp CCCCHHHHHHHTSGGGGCCC---------------CHHHHHHHHHHHHHHHTCSEE-ECCCS-SHHH-HHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHhcccccCCCCcc-ccCchHHHHHHHHHHHHHHHHHhCCCCc-eeEec-CcHH-HHHHHHHHh---
Confidence 3468889999988875444 444432 222222 234556677899999999765 55565 8855 677666655
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHH---HHc--CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEE
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW---RQS--LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGS 238 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~--G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~ 238 (609)
+++|| .|++..++|+++...+ ... +..++.++.+.++.+|+++|++++++ .++++++
T Consensus 113 ------------~~~gd--~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~~v~ 174 (420)
T 3gbx_A 113 ------------LQPGD--TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKE----HKPKMII 174 (420)
T ss_dssp ------------CCTTC--EEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHH----HCCSEEE
T ss_pred ------------cCCCC--EEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHh----cCCeEEE
Confidence 47888 6999999998854222 222 34556667777788999999999985 3689999
Q ss_pred EecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEec---hh
Q 038499 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTK---AL 315 (609)
Q Consensus 239 ~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~---~~ 315 (609)
+++++|+ ...|+++|.++|++||+++|+|++|+.+.............+|++++|+||+++||.| |+++.++ .+
T Consensus 175 ~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~ 251 (420)
T 3gbx_A 175 GGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEEL 251 (420)
T ss_dssp ECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSC-EEEEESSCCHHH
T ss_pred EecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCc-eEEEEcCCcHHH
Confidence 9888775 4789999999999999999999998654332111111112479999999999988886 9999987 44
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
. +.+.+... ....++++......+++++......+.+.+.++..++++++.+.|
T Consensus 252 ~--~~~~~~~~------------------------~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 305 (420)
T 3gbx_A 252 Y--KKLNSAVF------------------------PSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVF 305 (420)
T ss_dssp H--HHHHHHHC----------------------------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--HHhhhhcC------------------------CCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Confidence 1 11111100 001234444443333323221112345677888888999999999
Q ss_pred CCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 396 LPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
.+ .+++++.+. ...+++++.+.+ .. .+...+.+.|. +.||.++++...... +...
T Consensus 306 ~~-~g~~~~~~~--~~~~~~~~~~~~-~~---------------~~~~~~~~~l~-~~gi~v~~~~~~~~~-~~~~---- 360 (420)
T 3gbx_A 306 LN-RGYKVVSGG--TENHLFLLDLVD-KN---------------LTGKEADAALG-RANITVNKNSVPNDP-KSPF---- 360 (420)
T ss_dssp HH-TTCEEGGGS--CSSSEEEEECGG-GT---------------CCHHHHHHHHH-HTTEECEEECCTTCS-SCTT----
T ss_pred Hh-cCCeeccCC--CCCeEEEEEcCC-CC---------------CCHHHHHHHHH-HCCcEeccccCCCCc-cccC----
Confidence 87 488887531 234455555443 11 35677888884 469999863211100 0000
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHhc
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYY----MSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~----~t~eeid~ll~al~~v~~~~ 525 (609)
.+..+||+++.. .+++++++++++|+++++..
T Consensus 361 ------------------~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 361 ------------------VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp ------------------TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred ------------------CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 135699998654 46899999999999988663
No 132
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.93 E-value=3.2e-24 Score=227.96 Aligned_cols=304 Identities=16% Similarity=0.151 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.+++++|.+ +.|+++ +| ++++..++..+ +++|| .|+++..+|++....+
T Consensus 51 ~~~~~~l~~~la~~~~~~--~~i~~~-sG-t~a~~~~~~~~---------------~~~g~--~vl~~~~~~~~~~~~~~ 109 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA--GAVLTN-TG-MSAIHLVTTVF---------------LKPGD--LLVAPHDCYGGSYRLFD 109 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEES-SH-HHHHHHHHHHH---------------CCTTC--EEEEETTCCHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCC--cEEEeC-CH-HHHHHHHHHHH---------------hCCCC--EEEEecCCcHhHHHHHH
Confidence 355788999999999987 367775 88 57888887765 36788 6999999999877665
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
+..|++++.++.+ |+++|+++++ ++++++++++++||||.+.|+++|.++|++||+++|+|++++.+
T Consensus 110 ~~~~~~g~~~~~~~~~-----d~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 179 (386)
T 1cs1_A 110 SLAKRGCYRVLFVDQG-----DEQALRAALA-----EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSP 179 (386)
T ss_dssp HHHTTTSCEEEEECTT-----CHHHHHHHHH-----TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred HHHHhcCCEEEEeCCC-----CHHHHHHhhc-----cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 4568999999864 8999999998 58999999999999999999999999999999999999999887
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCCc--EEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccccccc
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGSP--GILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE 352 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g~--G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~ 352 (609)
.....+. .+.|+++.|+||+++||++. |++++++ ++ ++.+.+... ..
T Consensus 180 ~~~~~~~----~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l--~~~l~~~~~------------------------~~ 229 (386)
T 1cs1_A 180 ALQNPLA----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV--VTELAWWAN------------------------NI 229 (386)
T ss_dssp TTCCGGG----GTCSEEEEETTTTTTCSSCCCCEEEEESSHHH--HHHHHHHHH------------------------HH
T ss_pred ccCCccc----cCceEEEEcCcccccCCCCceeEEEEeCcHHH--HHHHHHHHH------------------------hc
Confidence 6543332 26899999999999988864 9999987 55 222211110 00
Q ss_pred cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEe-CCC-------------CCCCcceEEEE
Q 038499 353 SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKIL-GNT-------------STKRQAILSFN 418 (609)
Q Consensus 353 ~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~-~~~-------------~~~r~~~~~f~ 418 (609)
.++.+...... ++.. ....+...++..+..+++.+.|.+++.+.-. .+. ...+.++++|.
T Consensus 230 -~~~~~~~~~~~-~~~~----l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 303 (386)
T 1cs1_A 230 -GVTGGAFDSYL-LLRG----LRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFE 303 (386)
T ss_dssp -TCBCCHHHHHH-HHHH----HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred -CCCCCHHHHHH-HHhc----ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEE
Confidence 12222222111 1111 1123444556666777888888887766432 221 01236777777
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc---C------cccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG---G------CACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~---G------~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
+.. ....+.+.|. +.||.+++ | +.|+.. .|. ......-.
T Consensus 304 ~~~-------------------~~~~~~~~l~-~~gi~~~~~~~g~~~sl~~~~~~~-~~~--~~~~~~~~--------- 351 (386)
T 1cs1_A 304 LDG-------------------DEQTLRRFLG-GLSLFTLAESLGGVESLISHAATM-THA--GMAPEARA--------- 351 (386)
T ss_dssp ESS-------------------CHHHHHHHHH-TCSSSEEBSCCCSSSCEEEEGGGT-TTT--TSCHHHHH---------
T ss_pred ECC-------------------CHHHHHHHHH-hCCcceEcccCCCcceeeeccccc-ccc--cCCHHHHH---------
Confidence 654 2467777775 46999984 4 344311 000 00000000
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..|+.++++|||++..+++++++.+.++|+.+.
T Consensus 352 ~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 352 AAGISETLLRISTGIEDGEDLIADLENGFRAAN 384 (386)
T ss_dssp HHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHT
T ss_pred hcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 012336899999999999999999999998764
No 133
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=2.7e-24 Score=229.59 Aligned_cols=353 Identities=12% Similarity=0.024 Sum_probs=227.9
Q ss_pred EecCCCCCC-ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 80 YADHTASGR-SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 80 yld~~a~g~-~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
|+|...+.+ .++.+.+++.+.+... .+..+ ....++++.+++++|.+ +++++++|+ +++..++.
T Consensus 32 ~id~~~~~~~~~~~v~~a~~~~~~~~-------~y~~~----~~~~~l~~~la~~~~~~---~~v~~~~Gt-~a~~~~l~ 96 (399)
T 2oga_A 32 FLDLKAAYEELRAETDAAIARVLDSG-------RYLLG----PELEGFEAEFAAYCETD---HAVGVNSGM-DALQLALR 96 (399)
T ss_dssp SCCHHHHHHHTHHHHHHHHHHHHHHT-------CCSSS----HHHHHHHHHHHHHTTSS---EEEEESCHH-HHHHHHHH
T ss_pred ccccCcCCCCCCHHHHHHHHHHHhcC-------CCCCc----hhHHHHHHHHHHHHCCC---eEEEecCHH-HHHHHHHH
Confidence 445443322 3467888887766421 11111 34678999999999985 467776774 67888877
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEE
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
.++ +++|| .|+++.++|+++...++..|++++.++.++ ++.+|+++|+++++ ++++++
T Consensus 97 ~~~--------------~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v 155 (399)
T 2oga_A 97 GLG--------------IGPGD--EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-----PRTRAL 155 (399)
T ss_dssp HTT--------------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-----TTEEEE
T ss_pred HhC--------------CCCcC--EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-----CCCeEE
Confidence 763 36788 699999999999989999999999999886 57899999999998 578876
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEe-ch
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMT-KA 314 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~-~~ 314 (609)
+ ++||||.+.|+++|.++|+++|+++|+|++++.+... +..... ...|++++|+| |++|+++..|+++.+ ++
T Consensus 156 ~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~ 230 (399)
T 2oga_A 156 L---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGRRIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPE 230 (399)
T ss_dssp C---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETT-CTTCEEEEECCTTSSSCCSSCCEEEEESCHH
T ss_pred E---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCeecc-cccCEEEEeCCCCccCCcCCceEEEEeCCHH
Confidence 6 4689999999999999999999999999999877442 333221 12599999985 999865556888886 55
Q ss_pred hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 038499 315 LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALER 394 (609)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~ 394 (609)
+ ++.+.+....+.... |... ..... .+.+.++...+ .+ .+ ...+.+.++.+++++++.+.
T Consensus 231 ~--~~~l~~~~~~g~~~~-----------~~~~-~~g~~-~~~~~~~~a~~-~~-~l---~~~~~~~~~~~~~~~~l~~~ 290 (399)
T 2oga_A 231 L--AERLRMLRNYGSRQK-----------YSHE-TKGTN-SRLDEMQAAVL-RI-RL---AHLDSWNGRRSALAAEYLSG 290 (399)
T ss_dssp H--HHHHHHHHBTTCSST-----------TCCC-SCCCB-CCCCHHHHHHH-HH-HH---HTHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHhcCcccc-----------cccc-ccccC-CCcCHHHHHHH-HH-HH---HHHHHHHHHHHHHHHHHHHH
Confidence 5 222222222221100 0000 00000 11222222111 11 11 12455677788889999999
Q ss_pred hCCCCceEEeCCCCCCCcce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh-hhc
Q 038499 395 LLPNQNIKILGNTSTKRQAI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH-HLL 472 (609)
Q Consensus 395 L~~~p~i~v~~~~~~~r~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~-~ll 472 (609)
|.++|++++....+ ...++ +.|.+.. .+...+.+.|.+ .||.++.++... .... .+.
T Consensus 291 L~~~~g~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~l~~~L~~-~gI~v~~~~~~~-~~~~~~~~ 349 (399)
T 2oga_A 291 LAGLPGIGLPVTAP-DTDPVWHLFTVRT------------------ERRDELRSHLDA-RGIDTLTHYPVP-VHLSPAYA 349 (399)
T ss_dssp TTTCTTCBCCCCCT-TEECCCSSEEEEC------------------SSHHHHHHHHHH-TTBCCBCSCSSC-GGGSHHHH
T ss_pred hccCCCccccCCCC-CCcceeEEEEEEC------------------CCHHHHHHHHHH-CCCceecCCCCc-cccchhhc
Confidence 99988887754321 12222 1233332 246788888866 699999765211 0000 111
Q ss_pred CCC-----hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 473 DLD-----EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 473 ~i~-----~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++ .+.+..+ ..+++||+++.++|++|+++++++|+++++..
T Consensus 350 ~~~~~~~~~p~~~~~-----------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 350 GEAPPEGSLPRAESF-----------ARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp TTSCCTTSCHHHHHH-----------HHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCCChhHHHH-----------HhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 111 0111110 13789999999999999999999999988653
No 134
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.93 E-value=2.1e-23 Score=223.41 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH---
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--- 196 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--- 196 (609)
....+++++.+++++|.+ +++++++|+ +++..++..+ +++|| .|+++.+.|+++..
T Consensus 61 ~~~~~~l~~~ia~~~g~~---~~i~~~~g~-~ai~~~~~~l---------------~~~gd--~Vl~~~~~y~~~~~~~~ 119 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE---ACVATSSGM-GAIAATVLTI---------------LKAGD--HLISDECLYGCTHALFE 119 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHH-HHHHHHHHHH---------------CCTTC--EEEEESCCCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEeCChH-HHHHHHHHHH---------------hCCCC--EEEEeCCCchhHHHHHH
Confidence 455778999999999985 345554776 7888887765 37888 69999999999888
Q ss_pred -HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHH-hCCeEEEeccccC
Q 038499 197 -SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAASG 274 (609)
Q Consensus 197 -~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~-~g~~vivD~A~~~ 274 (609)
.++..|++++.++.+ |+++|+++++ ++++++++++++||||.+.|+++|+++|++ ||+++|+|++++.
T Consensus 120 ~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~ 189 (404)
T 1e5e_A 120 HALTKFGIQVDFINTA-----IPGEVKKHMK-----PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS 189 (404)
T ss_dssp THHHHTTCEEEEECTT-----STTHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred HHHHHcCCEEEEECCC-----CHHHHHHhcC-----CCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence 456689999999876 7899999998 589999999999999999999999999999 9999999999987
Q ss_pred CcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechh
Q 038499 275 PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKAL 315 (609)
Q Consensus 275 ~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~ 315 (609)
+.....+ .. +.|+++.|+||++++|++ .|+++++++.
T Consensus 190 ~~~~~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~~ 228 (404)
T 1e5e_A 190 PMITNPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKADL 228 (404)
T ss_dssp TTTCCGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH
T ss_pred hhhCCcc-cc---CCEEEEEcCccccCCCCCCeEEEEEECHHH
Confidence 7632222 12 689999999999998876 5999999887
No 135
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.93 E-value=5.2e-25 Score=230.00 Aligned_cols=329 Identities=12% Similarity=0.073 Sum_probs=210.0
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
.++|++++.+..+++.+.+++.+.... .. .+. ......++++.+++++|.+ .++++++|+. ++..+
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~-----~~-~y~----~~~~~~~l~~~la~~~g~~---~~~~~~~gt~-a~~~~ 69 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVG-----DD-VYG----EDPTINELERLAAETFGKE---AALFVPSGTM-GNQVS 69 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCC-----CG-GGT----CCHHHHHHHHHHHHHHTCS---EEEEESCHHH-HHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCC-----Cc-ccC----CChHHHHHHHHHHHHhCCc---eEEEecCcHH-HHHHH
Confidence 578999998888777888887654321 00 111 1223568899999999984 4677767775 45555
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH---HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhc-cCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL---SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYK-DAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~---~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~-~~~ 232 (609)
+.++ +++|| .|+++.++|.+... ..+..|++++.+ .++++.+|+++|++++++.. ..+
T Consensus 70 ~~~~---------------~~~gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~ 131 (347)
T 1jg8_A 70 IMAH---------------TQRGD--EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFP 131 (347)
T ss_dssp HHHH---------------CCTTC--EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSC
T ss_pred HHHh---------------cCCCC--EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhcccccccc
Confidence 5554 37888 69999999976542 456679999998 55577789999999997310 002
Q ss_pred CceEEEEecccCcc-ccccCH---HHHHHHHHHhCCeEEEeccccCC---cccccCCCCCCCCccEEEEcCCCCCCCCCC
Q 038499 233 RPILGSFSACSNVT-GIYSDT---RSIARLLHQYGGFACFDFAASGP---YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS 305 (609)
Q Consensus 233 ~~~lv~~s~~sn~T-G~~~dl---~~I~~la~~~g~~vivD~A~~~~---~~~id~~~~~~~~~D~v~~S~hK~lggp~g 305 (609)
+++++++++++||| |.+.|. ++|+++|++||+++++|+++..+ +...+...+ ..++|.+++|+||++++|.|
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~d~~~~s~sK~l~~~~G 210 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEY-AGYADSVMFCLSKGLCAPVG 210 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHH-HHTCSEEEEESSSTTCCSSC
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHh-cccccEEEEecccccCCCce
Confidence 68999999999999 999775 67889999999999999986432 111222111 01578889999999997754
Q ss_pred cEEEEEechhhccCCCCCC--ccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHH
Q 038499 306 PGILLMTKALYQLGSFPPS--TCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQ 383 (609)
Q Consensus 306 ~G~L~~~~~~~~l~~~~p~--~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~ 383 (609)
|+++.++++. +.+... ..+++ .....+.+.+ +. ..+... .+.+. +
T Consensus 211 -~~~~~~~~~~--~~~~~~~~~~~~~------------------------~~~~~~~~~~--~~-~~l~~~--~~~~~-~ 257 (347)
T 1jg8_A 211 -SVVVGDRDFI--ERARKARKMLGGG------------------------MRQAGVLAAA--GI-IALTKM--VDRLK-E 257 (347)
T ss_dssp -EEEEECHHHH--HHHHHHHHHHTCC------------------------CSSTHHHHHH--HH-HHHHHS--STTHH-H
T ss_pred -EEEEcCHHHH--HHHHHHHHHcCCc------------------------hhHHHHHHHH--HH-HHHHHH--HHHHH-H
Confidence 4666676662 222110 00000 0011122211 11 111121 12222 2
Q ss_pred HHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCccc
Q 038499 384 EETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 384 ~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
..+.++++.+.|+++ ++++... ....+++++.+.. .. .+..++.+.|.+ .||.++++.
T Consensus 258 ~~~~~~~l~~~L~~~-~~~~~~~--~~~~~~~~~~~~~-~~---------------~~~~~~~~~l~~-~gi~v~~~~-- 315 (347)
T 1jg8_A 258 DHENARFLALKLKEI-GYSVNPE--DVKTNMVILRTDN-LK---------------VNAHGFIEALRN-SGVLANAVS-- 315 (347)
T ss_dssp HHHHHHHHHHHHHHH-TCBCCGG--GCCSSEEEEECTT-SS---------------SCHHHHHHHHHH-HTEECEEEE--
T ss_pred HHHHHHHHHHHHHhc-CceeccC--CCcceEEEEEccc-cc---------------CCHHHHHHHHHH-CCCEEecCC--
Confidence 234566777777665 5554221 1234555554432 11 357788888865 699998421
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++++|++++.+++++|+++++++|+++++.
T Consensus 316 -------------------------------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 316 -------------------------------DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp -------------------------------TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 368999999999999999999999988753
No 136
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.93 E-value=1.4e-24 Score=232.46 Aligned_cols=159 Identities=17% Similarity=0.202 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR- 199 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~- 199 (609)
....++++.+++++|.+ +.|+++ +|+ +++..++. + +++|| .|+++...|+++...+.
T Consensus 67 p~~~~l~~~la~~~g~~--~~i~~~-sG~-~ai~~~~~-l---------------~~~gd--~Vl~~~~~y~~~~~~~~~ 124 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK--YCLAFA-SGL-AATVTITH-L---------------LKAGD--QIICMDDVYGGTNRYFRQ 124 (403)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEES-CHH-HHHHHHHT-T---------------SCTTC--EEEEESSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCC--cEEEEC-CHH-HHHHHHHH-H---------------hCCCC--EEEEeCCCcchHHHHHHH
Confidence 44678999999999986 367776 887 67887766 4 37888 69999999998776653
Q ss_pred ---HcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC-CeEEEeccccCC
Q 038499 200 ---QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG-GFACFDFAASGP 275 (609)
Q Consensus 200 ---~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g-~~vivD~A~~~~ 275 (609)
..|++++.++.+ |+++|+++++ ++++++++++++||||.+.|+++|+++|++|| +++|+|++++.+
T Consensus 125 ~~~~~G~~v~~v~~~-----d~~~l~~~i~-----~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~ 194 (403)
T 3cog_A 125 VASEFGLKISFVDCS-----KIKLLEAAIT-----PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSP 194 (403)
T ss_dssp TGGGGTCEEEEECTT-----SHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCT
T ss_pred HHHHcCCEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccc
Confidence 579999999875 8999999998 68999999999999999999999999999999 999999999887
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEe-chh
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMT-KAL 315 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~-~~~ 315 (609)
.....+. .+.|+++.|+||+++||++ .|+++++ +++
T Consensus 195 ~~~~~~~----~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l 233 (403)
T 3cog_A 195 YFQRPLA----LGADISMYSATKYMNGHSDVVMGLVSVNCESL 233 (403)
T ss_dssp TTCCTTT----TTCSEEEEETTTTTTCSSCCCCEEEEECCHHH
T ss_pred ccCCccc----cCCeEEEEcChhhccCCCCCeEEEEEECcHHH
Confidence 5332222 2689999999999999886 5999996 455
No 137
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.93 E-value=1.5e-24 Score=232.71 Aligned_cols=337 Identities=11% Similarity=0.035 Sum_probs=217.6
Q ss_pred ceEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 038499 77 RLTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRL 156 (609)
Q Consensus 77 ~~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l 156 (609)
..||...+-.-+.+....+.+..... . .+.+++......+++++.+++++|++ +.++| ++|+ ++++.+
T Consensus 46 ~pi~~s~t~~~~~~~~~~~~~~~~~~-----~---~~~y~r~~~p~~~~le~~lA~l~g~~--~~i~~-ssGt-~Ai~~a 113 (415)
T 2fq6_A 46 SVIQRASSLVFDSVEAKKHATRNRAN-----G---ELFYGRRGTLTHFSLQQAMCELEGGA--GCVLF-PCGA-AAVANS 113 (415)
T ss_dssp CCBCCCSCBCCSSHHHHHHHHHTTTT-----T---SCCCTTTCCHHHHHHHHHHHHHHTCS--EEEEE-SSHH-HHHHHH
T ss_pred CCeecccceeeCCHHHHHHhhccccC-----C---CccccCCCCchHHHHHHHHHHHhCCC--eEEEe-CCHH-HHHHHH
Confidence 45677666555555443333321100 0 12223333456788999999999985 24555 4675 578877
Q ss_pred HHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 157 QEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..+ +++|| .|+++..+|++....|. ..|++++.++.+ |+++|+++|+ +
T Consensus 114 l~~l---------------~~~Gd--~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~-----~ 166 (415)
T 2fq6_A 114 ILAF---------------IEQGD--HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQ-----P 166 (415)
T ss_dssp HHTT---------------CCTTC--EEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCC-----T
T ss_pred HHHH---------------hCCCC--EEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhc-----c
Confidence 7654 47898 79999999999887763 469999999764 7899999998 6
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGI 308 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~ 308 (609)
+|++|++++++||||.+.|+++|+++||+ ||+++++|++++.++....+ . .++|++++|+||++||+++ .|+
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~---~g~Div~~S~sK~lg~~g~~~~G~ 242 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-D---FGIDVSIQAATKYLVGHSDAMIGT 242 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-G---GTCSEEEEETTTTTTCSSSCCCEE
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-c---cCCeEEEEeCccccCCCCCceEEE
Confidence 89999999999999999999999999999 99999999999866432222 1 2789999999999998764 699
Q ss_pred EEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh-hHHHH-HHHHHHHHHHHhcCHHHHHHHHHH
Q 038499 309 LLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQM-IRAALAFWVKEYIGHEVIKKQEET 386 (609)
Q Consensus 309 L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~-~~aal~~~~~~~~g~~~i~~~~~~ 386 (609)
++.++++ ++.+... ... ..++. ..... ...++. ......++..+
T Consensus 243 l~~~~~~--~~~l~~~------------------------~~~-~G~~~~~~~a~~~~~~l~-------~l~~r~~~~~~ 288 (415)
T 2fq6_A 243 AVCNARC--WEQLREN------------------------AYL-MGQMVDADTAYITSRGLR-------TLGVRLRQHHE 288 (415)
T ss_dssp EEECTTT--HHHHHHH------------------------HHH-TTCCCCHHHHHHHHHHHH-------HHHHHHHHHHH
T ss_pred EEeCHHH--HHHHHHH------------------------HHh-cCCCCCHHHHHHHHhhhh-------HHHHHHHHHHH
Confidence 9988876 2222110 000 11111 11111 111111 12333445566
Q ss_pred HHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhh
Q 038499 387 YIERALERLLPNQNIK-ILGNTS-------------TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDL 452 (609)
Q Consensus 387 l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~ 452 (609)
.+..+.+.|.+.|.+. +.-+.- ....++++|.+.. ... ......+...| +.
T Consensus 289 n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g-~~~-------------~~~~~~~l~~l-~~ 353 (415)
T 2fq6_A 289 SSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-KLN-------------NEELANYLDNF-SL 353 (415)
T ss_dssp HHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-CCC-------------HHHHHHHHTTC-SS
T ss_pred HHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-CCC-------------HHHHHHHHHhC-Cc
Confidence 6777888887777664 322210 0245788888764 100 00123333433 45
Q ss_pred cCcEeccCcccCC-----hh--hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 453 FGIQARGGCACAG-----PY--GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 453 ~GI~v~~G~~ca~-----p~--~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
++|.++.|..|+- |. .|.+.. ...|+.++.||||++.++++++++.+.++|+.
T Consensus 354 ~~~a~s~G~~~s~~~~~~p~~~s~~~~~---------------~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 354 FSMAYSWGGYESLILANQPEHIAAIRPQ---------------GEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CEECSCCCSSSCEEEEECHHHHHTTCTT---------------CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CeEeccCCCCceeEEecCCCccccccch---------------hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 6788899988762 21 121110 01123468999999999999999999999874
No 138
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=9.9e-25 Score=230.25 Aligned_cols=350 Identities=13% Similarity=0.038 Sum_probs=221.1
Q ss_pred EecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 038499 80 YADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQE 158 (609)
Q Consensus 80 yld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (609)
|+|...+. +.++.+.+++.+.+...+ +.. .....++++.+++++|.+ .++++++|+. ++..++.
T Consensus 4 ~~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~----~~~~~~l~~~la~~~~~~---~~~~~~sGt~-al~~al~ 68 (367)
T 3nyt_A 4 FIDLKNQQARIKDKIDAGIQRVLRHGQ-------YIL----GPEVTELEDRLADFVGAK---YCISCANGTD-ALQIVQM 68 (367)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHCC-------CSS----CHHHHHHHHHHHHHHTCS---EEEEESCHHH-HHHHHHH
T ss_pred cccccccccccCHHHHHHHHHHHhcCC-------ccC----ChHHHHHHHHHHHHhCCC---cEEEeCCHHH-HHHHHHH
Confidence 44444433 344567777766554210 111 134678999999999985 6788866665 6777777
Q ss_pred HhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC-CCCCHHHHHHHHhhhccCCCceEE
Q 038499 159 VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD-GLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
.++ +++|| .|+++.++|+++...++..|++++.++++++ +.+|+++|+++++ +++++|
T Consensus 69 ~~~--------------~~~gd--~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v 127 (367)
T 3nyt_A 69 ALG--------------VGPGD--EVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAIT-----PRTKAI 127 (367)
T ss_dssp HTT--------------CCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCC-----TTEEEE
T ss_pred HhC--------------CCCcC--EEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcC-----cCCcEE
Confidence 664 47888 6999999999999999999999999999875 8899999999997 678877
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcC--CCCCCCCCCcEEEEEechh
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLST--HKFLGGPGSPGILLMTKAL 315 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~--hK~lggp~g~G~L~~~~~~ 315 (609)
+ ++|+||...|+++|.++|++||+++|+|++++.+.. .+.......+ |++++|+ ||++|+++..|+++.+++.
T Consensus 128 ~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~-~~~~~~~~~~-di~~~Sf~~~K~l~~~g~gg~~~~~~~~ 202 (367)
T 3nyt_A 128 I---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGAS-YKGKRSCNLS-TVACTSFFPSAPLGCYGDGGAIFTNDDE 202 (367)
T ss_dssp C---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCE-ETTEETTSSS-SEEEEECCTTSSSCCSSCCEEEEESCHH
T ss_pred E---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCe-ECCeeccCCC-CEEEEECCCCCcCCCcCceeEEEeCCHH
Confidence 6 778999999999999999999999999999987654 2222221112 8999985 8999874546888885432
Q ss_pred hccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 038499 316 YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL 395 (609)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L 395 (609)
. .+.+.+....|.... |... ..........+... +++. .....+.+.++.+++++++.+.|
T Consensus 203 l-~~~~~~~~~~g~~~~-----------~~~~-~~g~~~~~~~~~aa--~~~~----~l~~~~~~~~~~~~~~~~~~~~L 263 (367)
T 3nyt_A 203 L-ATAIRQIARHGQDRR-----------YHHI-RVGVNSRLDTLQAA--ILLP----KLEIFEEEIALRQKVAAEYDLSL 263 (367)
T ss_dssp H-HHHHHHHTBTTEEET-----------TEEC-SCCCBCCCCHHHHH--HHHH----HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhcCCCcC-----------ceee-ccCcCCCccHHHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 122222222221100 0000 00011112222221 1111 11235667778888899999999
Q ss_pred CCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC----Chhhhhh
Q 038499 396 LPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA----GPYGHHL 471 (609)
Q Consensus 396 ~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca----~p~~~~l 471 (609)
+++ ++.+.............+.+.. -+.+.+.+.|.+ .||.++.+..+. .++....
T Consensus 264 ~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~L~~-~GI~~~~~~~~~~~~~~~~~~~~ 323 (367)
T 3nyt_A 264 KQV-GIGTPFIEVNNISVYAQYTVRM------------------DNRESVQASLKA-AGVPTAVHYPIPLNKQPAVADEK 323 (367)
T ss_dssp HHT-TCCCCCCCTTEECCCSSEEEEC------------------SSHHHHHHHHHH-HTCCCBCSCSSCGGGSGGGCCTT
T ss_pred ccC-CeeccCCCCCCceeeEEEEEEe------------------CCHHHHHHHHHH-CCCceeccCCCccccChhhhccC
Confidence 877 4544332111111122222222 146788888866 599999775311 1111101
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
...+.+..+ ....+|++++..+|++|+++++++|++.-
T Consensus 324 --~~~~~~~~~-----------~~~~l~lp~~~~~t~~~i~~v~~~~~~~~ 361 (367)
T 3nyt_A 324 --AKLPVGDKA-----------ATQVMSLPMHPYLDTASIKIICAALTNLE 361 (367)
T ss_dssp --CCCHHHHHH-----------HHHEEEECCCTTCCHHHHHHHHHHHHC--
T ss_pred --CCChHHHHH-----------HhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 111222222 13789999999999999999999997654
No 139
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.92 E-value=8e-23 Score=217.28 Aligned_cols=326 Identities=16% Similarity=0.179 Sum_probs=212.2
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|+.++ |..++.|.+++.+.+......... .......++++++++++| .+ +++|+++| +++
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~l~~~la~~~g--~~-~v~~~~~g-t~a 105 (392)
T 3ruy_A 37 RYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRA-------FHSDQLGPWYEKVAKLTN--KE-MVLPMNTG-AEA 105 (392)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTT-------SEETTHHHHHHHHHHHHT--CS-EEEEESSH-HHH
T ss_pred EEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccc-------cCCHHHHHHHHHHHHhcC--CC-EEEEeCcH-HHH
Confidence 48888753 235788999998887643111110 123457789999999998 33 89999555 446
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc-------------eEEEEecCCCCCCCHH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA-------------EVVEIGLDDDGLLDIE 219 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv~v~~~~~g~ld~e 219 (609)
+..++.++... . .......+|+. .|++....|++....+...+. .+..++.+ |++
T Consensus 106 ~~~al~~~~~~--~----~~~~~~~~~~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 173 (392)
T 3ruy_A 106 VETAIKTARRW--A----YDVKKVEANRA-EIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLE 173 (392)
T ss_dssp HHHHHHHHHHH--H----HHTSCCCTTCC-EEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHH
T ss_pred HHHHHHHHHHh--h----hhccCCCCCCc-EEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHH
Confidence 66666544200 0 00000112222 688888888877665544322 25555543 899
Q ss_pred HHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCccc--ccCCCCCCCCccEE
Q 038499 220 ALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVE--IDVRSGQTDGYDAI 292 (609)
Q Consensus 220 ~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~--id~~~~~~~~~D~v 292 (609)
+|+++++ ++++++++++++||||.+.| +++|.++|++||+++|+|++++ .+... +..... ....|++
T Consensus 174 ~l~~~l~-----~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~d~~ 247 (392)
T 3ruy_A 174 ALKAAIT-----PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWD-NVTPDMY 247 (392)
T ss_dssp HHHHHCC-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGG-TCCCSEE
T ss_pred HHHHHhc-----cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhcc-CCCCCEE
Confidence 9999998 68999999999999999998 9999999999999999999985 22211 111111 1145888
Q ss_pred EEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 293 FLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 293 ~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
++| |.++|. ..+|++++++++ ++.+.+...++.. .+.+.....+.+++...
T Consensus 248 ~~S--K~l~gG~~~~G~~~~~~~~--~~~~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~- 299 (392)
T 3ruy_A 248 ILG--KALGGGVFPISCAAANRDI--LGVFEPGSHGSTF-----------------------GGNPLACAVSIAALEVL- 299 (392)
T ss_dssp EEC--GGGGTTTSCCEEEEECHHH--HTTCCTTSSCCSS-----------------------TTCHHHHHHHHHHHHHH-
T ss_pred EEc--hhhhCChhhhEEEEECHHH--HhhhccCCcCCCC-----------------------CCCHHHHHHHHHHHHHH-
Confidence 765 998863 348999999988 4455433211110 11122222223333322
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhCCC--CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 372 KEYIGHEVIKKQEETYIERALERLLPN--QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 372 ~~~~g~~~i~~~~~~l~~~~~~~L~~~--p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
+ .+.+.++.+++++++.+.|+++ +.+....+ ...++.+.+.. +...+.+.|
T Consensus 300 -~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~-------------------~~~~l~~~l 352 (392)
T 3ruy_A 300 -E---EEKLTERSLQLGEKLVGQLKEIDNPMITEVRG----KGLFIGIELNE-------------------PARPYCEQL 352 (392)
T ss_dssp -H---HTTHHHHHHHHHHHHHHHHTTCCCTTEEEEEE----ETTEEEEEESS-------------------CSHHHHHHH
T ss_pred -H---hhhHHHHHHHHHHHHHHHHHHhcCCCceEEEe----eeeEEEEEEcc-------------------hHHHHHHHH
Confidence 2 2567788888999999999886 34444322 34556665432 356788888
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.+ .||.+++|. ++++|+++++.+|++|+++++++|++++
T Consensus 353 ~~-~gi~v~~~~---------------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 353 KA-AGLLCKETH---------------------------------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp HT-TTEECCCBT---------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HH-CCcEEecCC---------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 65 699998542 3799999999999999999999999875
No 140
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=1.9e-23 Score=220.45 Aligned_cols=316 Identities=13% Similarity=0.071 Sum_probs=212.0
Q ss_pred eEEecCCCCCC------ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTASGR------SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~g~------~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
..|+|.+++.+ .++.+.+++.+.+... ++.... + . .....++++.+++++|. ++ +|+++ +|+++
T Consensus 28 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~-~~~~~~-y-~----~~~~~~l~~~la~~~g~-~~-~v~~~-~g~t~ 97 (375)
T 2eh6_A 28 KEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL-LHVSNL-Y-E----NPWQEELAHKLVKHFWT-EG-KVFFA-NSGTE 97 (375)
T ss_dssp CEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHC-SCCCTT-B-C----CHHHHHHHHHHHHTSSS-CE-EEEEE-SSHHH
T ss_pred CEEEEcCCcccccccCCCCHHHHHHHHHHHHhc-cccCcc-c-C----CHHHHHHHHHHHhhcCC-CC-eEEEe-CchHH
Confidence 45888875432 6788999988877542 232221 2 1 12356889999999998 34 89998 66667
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhh---cCC-CceEEEECCCCccchHHHHHHcCce-------------EEEEecCCCC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCL---RDE-ERWVVFVGPHEHHSNLLSWRQSLAE-------------VVEIGLDDDG 214 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l---~~g-d~~~Vlv~~~~h~s~~~~~~~~G~~-------------vv~v~~~~~g 214 (609)
++..++.++.. .. ++| | .|++...+|+.....+...+.. +..++.
T Consensus 98 a~~~~~~~~~~------------~~~~~~~g~~--~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 159 (375)
T 2eh6_A 98 SVEAAIKLARK------------YWRDKGKNKW--KFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL---- 159 (375)
T ss_dssp HHHHHHHHHHH------------HHHHTTCCCC--EEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT----
T ss_pred HHHHHHHHHHH------------HhccCCCCCC--EEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC----
Confidence 78777654210 01 467 6 6888888887776655543322 344432
Q ss_pred CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCccc--ccCCCCCCC
Q 038499 215 LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVE--IDVRSGQTD 287 (609)
Q Consensus 215 ~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~--id~~~~~~~ 287 (609)
.|+++|+++++ ++++++++++++|+||.+.| +++|.++|++||+++|+|++++ .+... +++.... .
T Consensus 160 -~d~~~l~~~l~-----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~ 232 (375)
T 2eh6_A 160 -NDIDSVYKLLD-----EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFN-L 232 (375)
T ss_dssp -TCHHHHHTTCC-----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-C
T ss_pred -chHHHHHHHhc-----CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcC-C
Confidence 48999999987 57999999999999999988 9999999999999999999988 44332 2233221 1
Q ss_pred CccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH-HHH
Q 038499 288 GYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAA 366 (609)
Q Consensus 288 ~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aa 366 (609)
..|++++| |+++++.++|++++++++ ++.+.+...+ ...+++.+.+.+ .++
T Consensus 233 ~~d~~s~S--K~~~~g~~~G~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~ 284 (375)
T 2eh6_A 233 KPDVIALA--KGLGGGVPIGAILAREEV--AQSFTPGSHG------------------------STFGGNPLACRAGTVV 284 (375)
T ss_dssp CCSEEEEC--GGGGTTSCCEEEEEEHHH--HTTCCTTSCC------------------------CSSTTCHHHHHHHHHH
T ss_pred CCCEEEEc--ccccCCCCeEEEEEcHHH--HhhhcCCCCC------------------------CCCCCCHHHHHHHHHH
Confidence 36888666 999877789999999987 4455432111 012333333322 222
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHH
Q 038499 367 LAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVA 446 (609)
Q Consensus 367 l~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 446 (609)
+... +.+.++.+++++++.+.|++++...+.+ ...++++.+.. +...++
T Consensus 285 l~~~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~g~~~~~~~~~-------------------~~~~~~ 333 (375)
T 2eh6_A 285 VDEV-------EKLLPHVREVGNYFKEKLKELGKGKVKG-----RGLMLGLELER-------------------ECKDYV 333 (375)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHTTSSEEEE-----ETTEEEEECSS-------------------CCHHHH
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCceE-----EEEEEEEEEcC-------------------cHHHHH
Confidence 2221 1567778888889999887765422211 23444444322 246788
Q ss_pred HHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 447 TLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 447 ~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.|.+ .||.++++ .++++||++++.++++|+++++++|+++
T Consensus 334 ~~l~~-~gi~~~~~---------------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 334 LKALE-KGLLINCT---------------------------------AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp HHHHH-TTEECEEE---------------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCEEecC---------------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 88866 69998843 1378999999999999999999999875
No 141
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.92 E-value=5.1e-24 Score=232.23 Aligned_cols=358 Identities=15% Similarity=0.134 Sum_probs=210.1
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHH-HHHHHHHHHHHHHhCCCCCC--cEEEeCChHHHHHHHHHHHhc
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTT-NMVHEASNYIKKCLGGGQED--AMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~--~vift~sGttaal~~l~~~l~ 161 (609)
.+.++.|.+++...+...| ++++.. ++.|..+. .+...+++++++++|++.++ ..+++++|+. ++..++.++
T Consensus 64 n~~~~~V~eA~~~~l~~~y~~G~~g~r-~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~-An~~al~al- 140 (490)
T 2a7v_A 64 NFCSRAALEALGSCLNNKYSEGYPGKR-YYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-ANLAVYTAL- 140 (490)
T ss_dssp CCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-HHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHcCCCccCCCccc-ccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHH-HHHHHHHHH-
Confidence 4568899999988887766 566553 33444332 44557889999999998642 2355557766 566555555
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHH--------HHHHcCce--EEEEecC-CCCCCCHHHHHHHHhhhcc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--------SWRQSLAE--VVEIGLD-DDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--------~~~~~G~~--vv~v~~~-~~g~ld~e~L~~al~~~~~ 230 (609)
++||| .|++++.+|.++.. .....|.. ++.++++ +++.+|+++|++++..
T Consensus 141 --------------~~pGD--~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~--- 201 (490)
T 2a7v_A 141 --------------LQPHD--RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL--- 201 (490)
T ss_dssp --------------CCSCE--ECCC-------------------------------CCBCTTTCSBCHHHHHHHHHH---
T ss_pred --------------cCCCC--EecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhh---
Confidence 48999 69999988865432 22344544 4445555 4789999999999975
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.++++++++.++|+ ...|+++|.++|++||+++++|+||+.+.+.....+....++|++++|+||+|+||.| |+++
T Consensus 202 -~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~G-G~i~ 277 (490)
T 2a7v_A 202 -FRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIF 277 (490)
T ss_dssp -HCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEE
T ss_pred -cCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccc-hhee
Confidence 36888888776665 5679999999999999999999998754332221111113689999999999999987 9999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
+++++...+ +. . +....+ +....+.........|+|+...+...+.++........+...++..+++++
T Consensus 278 ~~~~~~~~~---~~-~-~~~~~~------~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~ 346 (490)
T 2a7v_A 278 YRKGVKAVD---PK-T-GREIPY------TFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARA 346 (490)
T ss_dssp EECSEEEEE---TT-T-EEEEEC------CCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred eccchhccc---cc-c-cchhhH------HHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 998641100 00 0 000000 000000000001112445444333322222211112346777888899999
Q ss_pred HHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhh
Q 038499 391 ALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHH 470 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ 470 (609)
+.+.|.+. |+++..+. ....++++.+.+ . .++..++.+.|. +.||.+..+..+..+ ..
T Consensus 347 L~~~L~~~-G~~v~~~~--t~t~lv~vdl~~-~---------------g~~~~~~~~~L~-~~GI~v~~~~~p~d~-~p- 404 (490)
T 2a7v_A 347 MADALLER-GYSLVSGG--TDNHLVLVDLRP-K---------------GLDGARAERVLE-LVSITANKNTCPGDR-SA- 404 (490)
T ss_dssp HHHHHHHT-TCEEGGGS--CSSSEEEEECTT-T---------------TCCHHHHHHHHH-HTTEECEEECCTTCC-CS-
T ss_pred HHHHHHHc-CcEEecCC--CCCeEEEEEeCC-C---------------CCCHHHHHHHHH-hCCeEEecCccCCCC-CC-
Confidence 99999886 89987531 123444444443 1 156788888885 569999865433211 00
Q ss_pred hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHHHHHHHhc
Q 038499 471 LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP----YYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 471 ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~----~~~t~eeid~ll~al~~v~~~~ 525 (609)
..++.+||+.+ ...+++|+++++++|.+++...
T Consensus 405 ----------------------~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 405 ----------------------ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp ----------------------SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 02578999763 3468999999999999988754
No 142
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.92 E-value=7e-24 Score=228.37 Aligned_cols=307 Identities=12% Similarity=-0.011 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHH--HHHHHHhcccchhhHHHHHHhhhc--C----------CCceEEEECC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAI--KRLQEVMGIAVPSILREKLIKCLR--D----------EERWVVFVGP 188 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal--~~l~~~l~~~~~~~~~~~~~~~l~--~----------gd~~~Vlv~~ 188 (609)
..++|+.|+++++++++ +|++| +|+++++ +.++.++. . + || .|++..
T Consensus 80 ~~~lr~~ia~~~~~~~~-~i~~t-~G~~~al~~~~~~~~l~---------------~~~~g~~~~~~~~~gd--~V~v~~ 140 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVE-QVLAG-DASSLNIMFDVISWSYI---------------FGNNDSVQPWSKEETV--KWICPV 140 (427)
T ss_dssp CHHHHHHHHHHHTSCGG-GEEEC-SSCHHHHHHHHHHHHHH---------------HCCTTCSSCGGGSSCC--EEEEEE
T ss_pred cHHHHHHHHHHhCCCcc-eEEEe-CCcHHHHHHHHHHHHHh---------------ccCCcccccccCCCCC--EEEEcC
Confidence 56799999999999887 89998 7888888 46666652 3 4 67 799999
Q ss_pred CCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEe-cccCccccccCHH---HHHHHH-HHhC
Q 038499 189 HEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFS-ACSNVTGIYSDTR---SIARLL-HQYG 263 (609)
Q Consensus 189 ~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s-~~sn~TG~~~dl~---~I~~la-~~~g 263 (609)
+.|+++...++..|++++.++++++| +|+++|+++++. ++++++++. +++||||.+.|.+ +|+++| ++||
T Consensus 141 p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~ 215 (427)
T 3ppl_A 141 PGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKN----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPD 215 (427)
T ss_dssp SCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTS----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTT
T ss_pred CCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhc----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCC
Confidence 99999999999999999999998776 999999999953 578887755 8899999999987 788888 9999
Q ss_pred CeEEEeccccCCcc------cccCCCC----CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEe
Q 038499 264 GFACFDFAASGPYV------EIDVRSG----QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 264 ~~vivD~A~~~~~~------~id~~~~----~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
+++|+|++++.... ++++..+ ...+.++++.|+||+++++.++|++++++++ ++.+...
T Consensus 216 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l--~~~~~~~--------- 284 (427)
T 3ppl_A 216 FRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAEN--RKWYTGH--------- 284 (427)
T ss_dssp CEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHH--HHHHHHH---------
T ss_pred CEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHH--HHHHHHH---------
Confidence 99999999875211 1111110 0135678999999995544579999999887 2222110
Q ss_pred ecccccccccccccccccccCCChhHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHH----HHHHHhCCCCceEEeCCCC
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMIR-AALAFWVKEYIGHEVIKKQEETYIE----RALERLLPNQNIKILGNTS 408 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~-aal~~~~~~~~g~~~i~~~~~~l~~----~~~~~L~~~p~i~v~~~~~ 408 (609)
......+++.+.+.+. +++.-...-....+.+.++.++.++ .+.+.+..++++.+..+
T Consensus 285 ---------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-- 347 (427)
T 3ppl_A 285 ---------------AGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP-- 347 (427)
T ss_dssp ---------------HHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC--
T ss_pred ---------------hhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC--
Confidence 0111122333333221 1111000000112333333333444 44444444445666554
Q ss_pred CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhh
Q 038499 409 TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQK 488 (609)
Q Consensus 409 ~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~ 488 (609)
..+++.+...+ . .+...+.+.|.+ .||.+++|+.|.+. +..
T Consensus 348 --~~g~~~~~~~~-~----------------~~~~~~~~~l~~-~gv~v~~~g~~~~~-~~~------------------ 388 (427)
T 3ppl_A 348 --AGGYFISLDVV-P----------------GTASRVAELAKE-AGIALTGAGSSYPL-RQD------------------ 388 (427)
T ss_dssp --SBSSCEEEECS-T----------------TCHHHHHHHHHH-TTEECCCTTTTSGG-GCC------------------
T ss_pred --CccEEEEEECC-c----------------chHHHHHHHHHH-CCCEEecCcCcCCC-CCC------------------
Confidence 23444444443 1 146778888855 69999996555421 100
Q ss_pred CCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 489 GYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 489 ~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..++++|||++.. ++++++.++++|+++++..
T Consensus 389 ----~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 389 ----PENKNLRLAPSLP-PVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp ----TTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHH
Confidence 0258999999755 9999999999999887653
No 143
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.7e-24 Score=229.68 Aligned_cols=344 Identities=10% Similarity=-0.004 Sum_probs=221.4
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CC--CCCCcEEEeCChHHHHHHHHHHHhcc
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GG--GQEDAMIFCGSGTTAAIKRLQEVMGI 162 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~--~~~~~vift~sGttaal~~l~~~l~~ 162 (609)
.|+.+.+++.+.+... ...+ |....+ ..++++.+++++ |. +++ +|++| +|+++++..++.++
T Consensus 71 ~~~~v~~a~~~~~~~~-~~~~---Y~~~~g----~~~lr~~ia~~l~~~~g~~~~~~-~v~~t-~G~~~al~~~~~~l-- 138 (447)
T 3b46_A 71 PPQFAIKEAQKALDIP-MVNQ---YSPTRG----RPSLINSLIKLYSPIYNTELKAE-NVTVT-TGANEGILSCLMGL-- 138 (447)
T ss_dssp CCHHHHHHHHHHTTSG-GGGS---CCCTTC----CHHHHHHHHHHHTTTTTSCCCGG-GEEEE-SHHHHHHHHHHHHH--
T ss_pred CCHHHHHHHHHHHhCc-CCCC---CCCCCC----CHHHHHHHHHHHHHhcCCCCChh-hEEEe-CCHHHHHHHHHHHH--
Confidence 5678899988877531 1011 111111 234555555554 54 344 89998 78888999888876
Q ss_pred cchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC------------CCCCCHHHHHHHHhhhcc
Q 038499 163 AVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD------------DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 163 ~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~------------~g~ld~e~L~~al~~~~~ 230 (609)
+++|| .|++..+.|+++...++..|++++.++.++ ++.+|+++|+++++
T Consensus 139 -------------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---- 199 (447)
T 3b46_A 139 -------------LNAGD--EVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT---- 199 (447)
T ss_dssp -------------CCTTC--EEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC----
T ss_pred -------------cCCCC--EEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc----
Confidence 37888 688889999999988899999999999864 35789999999997
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc---cccCCCC--CCCCccEEEEcCCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---EIDVRSG--QTDGYDAIFLSTHKFLGG 302 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~---~id~~~~--~~~~~D~v~~S~hK~lgg 302 (609)
++++++++++++||||.+.+ +++|+++|++||+++|+|++++.... ...+..+ ...+.|+++.|+||++|.
T Consensus 200 -~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 278 (447)
T 3b46_A 200 -SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAA 278 (447)
T ss_dssp -TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTC
T ss_pred -cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCC
Confidence 58999999999999999964 78899999999999999999875321 1122111 012578999999999974
Q ss_pred CC-CcEEEEE-echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHH-HHHHHHHHHHHhcCHHH
Q 038499 303 PG-SPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM-IRAALAFWVKEYIGHEV 379 (609)
Q Consensus 303 p~-g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~-~~aal~~~~~~~~g~~~ 379 (609)
|+ .+|++++ ++++ ++.+... ......+.+...+. +.+++.... .....+.
T Consensus 279 ~G~riG~~~~~~~~l--~~~l~~~------------------------~~~~~~~~~~~~~~a~~~aL~~~~-~~~~~~~ 331 (447)
T 3b46_A 279 TGWRIGWVLSLNAEL--LSYAAKA------------------------HTRICFASPSPLQEACANSINDAL-KIGYFEK 331 (447)
T ss_dssp TTSCCEEEECSCHHH--HHHHHHH------------------------HHHHTSSCCHHHHHHHHHHHHHHH-HHTHHHH
T ss_pred cchhhEEEEeCCHHH--HHHHHHH------------------------HhhccCCCChHHHHHHHHHHhCCc-chHHHHH
Confidence 32 4899999 8777 2222110 00111222233332 222332210 1233667
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc
Q 038499 380 IKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG 459 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~ 459 (609)
+.++.+++++++.+.|+++ ++++..+ ..+++.+.-.+ ........+....-+...+...+++.|.++.||.+.+
T Consensus 332 ~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~g~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 405 (447)
T 3b46_A 332 MRQEYINKFKIFTSIFDEL-GLPYTAP----EGTYFVLVDFS-KVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIP 405 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCEECC----SBSSEEEEECT-TCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeecCC----CeeEEEEEecc-cccCccccccccccccCCCHHHHHHHHHHhCCEEEEC
Confidence 7888888999999999876 6777654 23444443333 1000000000000000124557888786667999999
Q ss_pred CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 460 GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 460 G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
|..|..+..... .++++||+++ .++++++.++++|+++
T Consensus 406 g~~f~~~~~~~~----------------------~~~~iRls~~--~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 406 PTEFYIKEHEKA----------------------AENLLRFAVC--KDDAYLENAVERLKLL 443 (447)
T ss_dssp GGGGSCGGGGGG----------------------GTTEEEEECC--SCHHHHHHHHHHGGGG
T ss_pred chHhCCCCccCC----------------------CCCEEEEEEe--CCHHHHHHHHHHHHHH
Confidence 876653211000 1489999998 3899999999988763
No 144
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.92 E-value=3.5e-23 Score=220.32 Aligned_cols=318 Identities=14% Similarity=0.120 Sum_probs=210.5
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
..|+|.+++ |+.++.+.+++.+.+... .+.... + ......++++.+++++|.+++ +|+++ +|+++
T Consensus 45 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg~~ 115 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGHGNPEVVEAVKRQAETL-MAMPQT-L-----PTPMRGEFYRTLTAILPPELN-RVFPV-NSGTE 115 (395)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC-CCCCTT-S-----CCHHHHHHHHHHHHTSCTTEE-EEEEE-SSHHH
T ss_pred CEEEEccCccccccCCCCCHHHHHHHHHHHHhC-CCCccc-c-----CCHHHHHHHHHHHHhcCCCcC-EEEEc-CcHHH
Confidence 357887644 567888999998877542 221111 1 235678899999999987665 89998 55566
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcCce------------EEEEecCCCCCCCH
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSLAE------------VVEIGLDDDGLLDI 218 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G~~------------vv~v~~~~~g~ld~ 218 (609)
++..++.++. .+.+++ .|++.+..|++. ...+...|++ +..++. .|+
T Consensus 116 a~~~al~~~~-------------~~~~~~--~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~ 175 (395)
T 1vef_A 116 ANEAALKFAR-------------AHTGRK--KFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDV 175 (395)
T ss_dssp HHHHHHHHHH-------------HHHSCC--EEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCH
T ss_pred HHHHHHHHHH-------------HHhCCC--eEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcH
Confidence 7777766541 023566 455556666554 4455555665 333432 489
Q ss_pred HHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc----ccCCCCCCCCc
Q 038499 219 EALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE----IDVRSGQTDGY 289 (609)
Q Consensus 219 e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~----id~~~~~~~~~ 289 (609)
++|+++++ ++++++++++++|+||.+.| +++|.++|++||+++|+|++++. +... ++... ...
T Consensus 176 ~~l~~~i~-----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~---~~~ 247 (395)
T 1vef_A 176 EALKRAVD-----EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFG---IVP 247 (395)
T ss_dssp HHHHHHCC-----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT---CCC
T ss_pred HHHHHHhc-----cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcC---CCC
Confidence 99999998 57899999988999999988 99999999999999999999882 2111 11111 145
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH--HHHHHH
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ--MIRAAL 367 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~--~~~aal 367 (609)
|++ |+||+++++.++|++++++++ ++.+.+...+ . ..+++... .+.+++
T Consensus 248 d~~--s~sK~~~~g~~~G~~~~~~~~--~~~l~~~~~~------------------------~-~~~~~~~~~~a~~~al 298 (395)
T 1vef_A 248 DIL--TLAKALGGGVPLGVAVMREEV--ARSMPKGGHG------------------------T-TFGGNPLAMAAGVAAI 298 (395)
T ss_dssp SEE--EECGGGGTTSSCEEEEEEHHH--HHTSCTTSSC------------------------C-SSTTCHHHHHHHHHHH
T ss_pred CEE--EEcccccCCCceEEEEehHHH--HhhhccCCcC------------------------C-CcCCCHHHHHHHHHHH
Confidence 766 569999987779999999987 4444321000 0 01122222 223344
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc--eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH
Q 038499 368 AFWVKEYIGHEVIKKQEETYIERALERLLPNQN--IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV 445 (609)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~--i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v 445 (609)
... +. +.+.++.+++++++.+.|++++. +.... ....++++.+.. ....+
T Consensus 299 ~~~--~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~g~~~~~~~~~-------------------~~~~l 350 (395)
T 1vef_A 299 RYL--ER---TRLWERAAELGPWFMEKLRAIPSPKIREVR----GMGLMVGLELKE-------------------KAAPY 350 (395)
T ss_dssp HHH--HH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEE----EETTEEEEEESS-------------------CSHHH
T ss_pred HHH--Hh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEE----EEEEEEEEEEcC-------------------hHHHH
Confidence 433 11 34567788888899998877632 21111 123455554432 24678
Q ss_pred HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 446 ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 446 ~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.+.|.++.||.++++ .++++||+++++++++|+++++++|++++
T Consensus 351 ~~~l~~~~gi~v~~~---------------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 351 IARLEKEHRVLALQA---------------------------------GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHHCEECEES---------------------------------STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEecC---------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 888873469999853 13799999999999999999999998875
No 145
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.92 E-value=3.7e-23 Score=227.57 Aligned_cols=350 Identities=11% Similarity=-0.004 Sum_probs=219.7
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.|..+.+++.+.+....+ .....|....+...+++.+.+++.+..| ++++ +|++| +|+++++..++.++.
T Consensus 107 ~p~~~~~~a~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~l~----- 178 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPG-RATGAYSHSQGIHGLRDAIASGIASRDGFPANAD-DIFLT-DGASPGVHLMMQLLI----- 178 (500)
T ss_dssp SCHHHHHHHHHHHTTSTT-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG-GEEEE-SSSHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHcCCC-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc-cEEEc-CCHHHHHHHHHHHHc-----
Confidence 344566666555543211 0111232333344555555555555555 4455 89998 788888998888762
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCC--CCCCHHHHHHHHhhhcc-CCCceEEEEeccc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDD--GLLDIEALRSKLELYKD-AKRPILGSFSACS 243 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--g~ld~e~L~~al~~~~~-~~~~~lv~~s~~s 243 (609)
.++|| .|+++.+.|+++...++..|++++.++++++ +.+|+++|+++|++... ..+++++++++++
T Consensus 179 ---------~~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~ 247 (500)
T 3tcm_A 179 ---------RNEKD--GILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247 (500)
T ss_dssp ---------CSTTE--EEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSC
T ss_pred ---------CCCCC--EEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCC
Confidence 15787 7999999999999999999999999998764 48999999999984211 1268899999999
Q ss_pred CccccccC---HHHHHHHHHHhCCeEEEeccccCCcc-----cccCC----CCC--CCCc-cEEEEcCCCCCCCCC--Cc
Q 038499 244 NVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-----EIDVR----SGQ--TDGY-DAIFLSTHKFLGGPG--SP 306 (609)
Q Consensus 244 n~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~-----~id~~----~~~--~~~~-D~v~~S~hK~lggp~--g~ 306 (609)
||||.+.+ +++|+++|++||+++++|++++.... ..++. .+. .+.. .+++.|+||.+.|+. .+
T Consensus 248 NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 327 (500)
T 3tcm_A 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRG 327 (500)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCC
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccce
Confidence 99999987 45677779999999999999775321 11111 000 1122 356679999983332 37
Q ss_pred EEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH------------HH
Q 038499 307 GILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF------------WV 371 (609)
Q Consensus 307 G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~------------~~ 371 (609)
|++++ ++++ ++.+... ... ..+++..+...++..+ +.
T Consensus 328 G~~~~~~~~~~~--~~~l~~~-------------------------~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 328 GYFEITGFSAPV--REQIYKI-------------------------ASV-NLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp EEEEEESCCTTH--HHHHHHH-------------------------HHT-TCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred EEEEEeCCCHHH--HHHHHHH-------------------------Hhc-ccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 99998 6666 2222100 011 1223333322221111 11
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCC-hHHHHHHHh
Q 038499 372 KEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLH-GPFVATLLN 450 (609)
Q Consensus 372 ~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~L~ 450 (609)
+ ..+.+.++.+++++++.+.|+++|++++..+ ..+++.|.-..-+... .+........ ...++..++
T Consensus 380 ~---~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~----~g~~~~~~~~~lp~~~-----~~~~~~~g~~~~~~~~~~ll 447 (500)
T 3tcm_A 380 A---EKDGILASLARRAKALEHAFNKLEGITCNEA----EGAMYVFPQICLPQKA-----IEAAKAANKAPDAFYALRLL 447 (500)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHTSTTEECCCC----CBTTEECCEECCCHHH-----HHHHHHHTSCHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhcCCCcEEecC----CeEEEEeeeecCchhh-----HHHHHhcCCCcHHHHHHHHH
Confidence 1 2456677888889999999999999988755 3456655322100000 0000000011 223334444
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
++.||.+++|..|..+. ..+++|+++. .++++++.++++|+++.+..
T Consensus 448 ~~~gI~v~pg~~f~~~~--------------------------g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~ 494 (500)
T 3tcm_A 448 ESTGIVVVPGSGFGQVP--------------------------GTWHFRCTIL--PQEDKIPAVISRFTVFHEAF 494 (500)
T ss_dssp HHHCEECEESTTTCCCT--------------------------TCCBEEEESC--SCTTTHHHHHHHHHHHHHHH
T ss_pred HHCCEEEEeCcccCCCC--------------------------CCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
Confidence 56799999998876321 1478999998 79999999999999987654
No 146
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=3.2e-24 Score=228.82 Aligned_cols=307 Identities=15% Similarity=0.106 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW 198 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (609)
......++++.+++++|.+ +.++++ +| +++++.++. + +++|| .|+++..+|++....+
T Consensus 53 ~~~~~~~lr~~la~~~g~~--~~i~~~-sG-t~a~~~al~-~---------------~~~gd--~Vi~~~~~y~~~~~~~ 110 (393)
T 1n8p_A 53 QNPNRENLERAVAALENAQ--YGLAFS-SG-SATTATILQ-S---------------LPQGS--HAVSIGDVYGGTHRYF 110 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCS--EEEEES-CH-HHHHHHHHH-T---------------SCSSC--EEEEESSCCHHHHHHH
T ss_pred CChhHHHHHHHHHHHhCCC--cEEEEC-Ch-HHHHHHHHH-H---------------cCCCC--EEEEeCCCchHHHHHH
Confidence 3455788999999999986 255555 78 578888877 5 37888 6888889998776654
Q ss_pred ----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHh----CCeEEEec
Q 038499 199 ----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQY----GGFACFDF 270 (609)
Q Consensus 199 ----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~----g~~vivD~ 270 (609)
+..|++++.++.+ | ++|+++++ +++++|++++++||||.+.|+++|+++|++| |+++|+|+
T Consensus 111 ~~~~~~~G~~v~~v~~~-----d-~~l~~~i~-----~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~ 179 (393)
T 1n8p_A 111 TKVANAHGVETSFTNDL-----L-NDLPQLIK-----ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDN 179 (393)
T ss_dssp HHTSTTTCSCCEEESSH-----H-HHHHHHSC-----SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEEC
T ss_pred HHHHHHcCcEEEEeCCC-----h-HHHHHhcc-----cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeC
Confidence 3469999999875 7 89999987 5899999999999999999999999999999 99999999
Q ss_pred cccCCcccccCCCCCCCCccEEEEcCCCCCCCCC-Cc-EEEEEe-chhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 271 AASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-SP-GILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 271 A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~-G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
+++.+... ++..+ ++|++++|+||++|+++ .+ |+++++ +++ ++.+.+.
T Consensus 180 a~~~~~~~-~~~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~~~--~~~l~~~----------------------- 230 (393)
T 1n8p_A 180 TFLSPYIS-NPLNF---GADIVVHSATKYINGHSDVVLGVLATNNKPL--YERLQFL----------------------- 230 (393)
T ss_dssp TTTHHHHC-CGGGG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHH--HHHHHHH-----------------------
T ss_pred CccccccC-CHHHc---CCeEEEEECcccccCCCCceeEEEEeCCHHH--HHHHHHH-----------------------
Confidence 99876542 33332 68999999999998554 25 999886 555 2222110
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc-eE-EeCCC--CC-----------C-C
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN-IK-ILGNT--ST-----------K-R 411 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~-i~-v~~~~--~~-----------~-r 411 (609)
.....++.+..... +++.. ........++..+.++++.+.|.+.+. +. +.-+. +. . .
T Consensus 231 --~~~~g~~~~~~~~~-~~~~~----l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~ 303 (393)
T 1n8p_A 231 --QNAIGAIPSPFDAW-LTHRG----LKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDAL 303 (393)
T ss_dssp --HHHHCCCCCHHHHH-HHHHH----HTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGC
T ss_pred --HHhcCCCCCHHHHH-HHHhc----cchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCC
Confidence 00011222211111 11111 112344445556667778888887765 54 32221 00 1 2
Q ss_pred -cceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---h--hhhhhcCCChhHHHHHHHH
Q 038499 412 -QAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---P--YGHHLLDLDEAQSYQIRSA 485 (609)
Q Consensus 412 -~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p--~~~~ll~i~~~~~~~~~~~ 485 (609)
.++++|.+.+ .. .....+...| +.++|.++.|.+|+. | ..|.. +..+.
T Consensus 304 ~~~i~~~~l~~-~~---------------~~~~~~l~~l-~~~~~~~s~G~~~s~~~~p~~~~h~~--~~~~~------- 357 (393)
T 1n8p_A 304 GGGMISFRIKG-GA---------------EAASKFASST-RLFTLAESLGGIESLLEVPAVMTHGG--IPKEA------- 357 (393)
T ss_dssp CCSEEEEEESS-CH---------------HHHHHHHHHC-SSSEECSCCCCSSCEEECTTTTTSCS--SCTTT-------
T ss_pred CccEEEEEeCC-cH---------------HHHHHHHhhC-CcceECCCCCCCcceeeccccccccc--cCHHH-------
Confidence 5677887754 10 1234455554 345778877866652 1 22210 00000
Q ss_pred HhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 486 IQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 486 ~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.-..|+.++.||+|++.++++++++.+.++|+.+.
T Consensus 358 --~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 358 --REASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp --TTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 00122346899999999999999999999998753
No 147
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.92 E-value=2.6e-23 Score=221.72 Aligned_cols=307 Identities=16% Similarity=0.110 Sum_probs=209.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
++.......++++.+++++|.+ +++++++|+ +++..++..+ +++|| .|+++..+|+++.
T Consensus 61 ~r~~~~~~~~l~~~la~~~g~~---~~~~~~sGt-~A~~~al~~~---------------~~~gd--~Vi~~~~~y~~~~ 119 (392)
T 3qhx_A 61 ARTGNPTRTALEAALAAVEDAA---FGRAFSSGM-AAADCALRAM---------------LRPGD--HVVIPDDAYGGTF 119 (392)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCS---EEEEESSHH-HHHHHHHHHH---------------CCTTC--EEEEETTCCHHHH
T ss_pred cCCCChHHHHHHHHHHHHhCCC---cEEEECCHH-HHHHHHHHHH---------------hCCCC--EEEEeCCCcchHH
Confidence 3334556789999999999985 567776775 5777777655 37888 6999999999887
Q ss_pred HHH----HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 196 LSW----RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 196 ~~~----~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
..+ +..|++++.++.+ |+++|+++++ +++++|++++++||||.+.|+++|+++|++||+++|+|++
T Consensus 120 ~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~ 189 (392)
T 3qhx_A 120 RLIDKVFTGWNVEYTPVALA-----DLDAVRAAIR-----PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNT 189 (392)
T ss_dssp HHHHHTGGGGTCEEEEECTT-----CHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhC-----CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECC
Confidence 776 5579999999875 8999999998 6899999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec-hhhccCCCCCCccCCCceEeecccccccccccccc
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI 348 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (609)
++.+...... . .++|+++.|+||++||+++ .|+++.++ ++. ..+...
T Consensus 190 ~~~~~~~~~~-~---~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~--~~l~~~------------------------ 239 (392)
T 3qhx_A 190 FASPALQQPL-S---LGADVVLHSTTKYIGGHSDVVGGALVTNDEELD--QSFAFL------------------------ 239 (392)
T ss_dssp TTCTTTCCGG-G---GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHH--HHHHHH------------------------
T ss_pred CcccccCChH-H---hCCcEEEEcCccccCCCCCceEEEEEECcHHHH--HHHHHH------------------------
Confidence 8866432211 2 2789999999999997653 79999884 442 111100
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC--C-----------CCcce
Q 038499 349 EERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS--T-----------KRQAI 414 (609)
Q Consensus 349 ~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~--~-----------~r~~~ 414 (609)
......+++.... .+++.. ....+...++..++++++.+.|+++|.+. +..+.- . ...++
T Consensus 240 -~~~~g~~~~~~~~-~~~~~~----l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~ 313 (392)
T 3qhx_A 240 -QNGAGAVPGPFDA-YLTMRG----LKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGM 313 (392)
T ss_dssp -HHHHCCCCCHHHH-HHHHHH----HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred -HHhcCCCCCHHHH-HHHHhh----hhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceE
Confidence 0000111111111 111111 11234445666777888888898888874 333311 0 12457
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---hhhhhhcCCChhHHHHHHHHHhhCCC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---PYGHHLLDLDEAQSYQIRSAIQKGYV 491 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p~~~~ll~i~~~~~~~~~~~~~~~~~ 491 (609)
++|.+.. +. .....+...| +.++|.+..|..|+- |.......+..+ -.
T Consensus 314 ~~~~l~~-~~---------------~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~------------~~ 364 (392)
T 3qhx_A 314 VSVRMRA-GR---------------TAAEQLCAKT-NIFILAESLGSVESLIEHPSAMTHASTAGS------------QL 364 (392)
T ss_dssp EEEEETT-CH---------------HHHHHHHHHC-SSSEECSCCCCSSCEEECGGGTSCGGGBTT------------BC
T ss_pred EEEEeCC-cH---------------HHHHHHHHhC-CCceECCCCCCCCceeeCcccccccccCHH------------Hc
Confidence 7777764 21 1345666666 557899998887652 211100000000 12
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 492 GVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 492 ~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
++.++.||||++..+++++++.+.++|
T Consensus 365 g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 365 EVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp CCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 345799999999999999998888876
No 148
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.92 E-value=8.6e-24 Score=227.93 Aligned_cols=343 Identities=12% Similarity=0.042 Sum_probs=220.6
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCCCCCcEEEeCChHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~~~~~vift~sGtta 151 (609)
++++|..+... +.++.|.+++.+.+... ++.+... ++.......++++.+++++ +.+++ +|+|| +|+++
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~---~y~~~~g~~~l~~~ia~~~~~~~~~~~~-~i~~t-~G~~~ 130 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHEL-STIEGYS---GYGAEQGAKPLRAAIAKTFYGGLGIGDD-DVFVS-DGAKC 130 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHHT-TSTTTCC---CCCCTTCCHHHHHHHHHHHHTTTTCCGG-GEEEE-SCHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcc-cccCCcc---CCCCCCCCHHHHHHHHHHHHccCCCCcc-eEEEC-CChHH
Confidence 57777665433 67788999998877643 2222111 1111122456677777775 77765 89998 88888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc------------eEEEEecCCCC--CCC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA------------EVVEIGLDDDG--LLD 217 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v~~~~~g--~ld 217 (609)
++..+.. + +++|| .|+++.+.|+++...++..|+ +++.++++.++ ..|
T Consensus 131 al~~l~~-l---------------~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (432)
T 3ei9_A 131 DISRLQV-M---------------FGSNV--TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD 192 (432)
T ss_dssp HHHHHHH-H---------------HCTTC--CEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC
T ss_pred HHHHHHH-H---------------cCCCC--EEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC
Confidence 8887533 3 36888 599999999999988888774 68888887533 334
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc---ccccCCCCC-CCCcc
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY---VEIDVRSGQ-TDGYD 290 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~---~~id~~~~~-~~~~D 290 (609)
+++ . ++++++++++++||||.+.+ +++|+++|++||+++|+|++++... .+..+.... ..+.+
T Consensus 193 l~~-----~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T 3ei9_A 193 LST-----V-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262 (432)
T ss_dssp GGG-----C-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTE
T ss_pred hhh-----C-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeE
Confidence 221 1 57899999999999999987 5567777999999999999987431 122222211 12456
Q ss_pred EEEEcCCCCCCCC-CCcEEEEEechhhccCC-CCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHH
Q 038499 291 AIFLSTHKFLGGP-GSPGILLMTKALYQLGS-FPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALA 368 (609)
Q Consensus 291 ~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~-~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~ 368 (609)
+++.|++|++|.+ .++|++++++++ +.. ..+. ...+.. .......+++......+...
T Consensus 263 i~~~S~SK~~g~~G~r~G~~~~~~~~--~~~~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~a~~~~ 322 (432)
T 3ei9_A 263 METASFSNYAGFTGVRLGWTVIPKKL--LYSDGFPV-----------------AKDFNR-IICTCFNGASNISQAGALAC 322 (432)
T ss_dssp EEEEESHHHHCTTTTCCEEEECCTTC--BCTTSCBH-----------------HHHHHH-HHHHSCCCSCHHHHHHHHHH
T ss_pred EEEecchhccCCcccceEEEEEChHH--hhcchHHH-----------------HHHHHH-HhccccCCCCHHHHHHHHHH
Confidence 8899999999733 358999998876 211 0000 000000 00111222333322211111
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 369 FWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
+........+.+.++.+++++++.+.|+++ ++++..+. ...++++.+.. .+..++++.
T Consensus 323 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~~~~~~------------------~~~~~~~~~ 380 (432)
T 3ei9_A 323 LTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGK---NAPYVWVHFPN------------------QSSWDVFAE 380 (432)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECS---SSSEEEEECTT------------------SCHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCC---cceEEEEECCC------------------CCHHHHHHH
Confidence 111111235677888888999999999887 78777542 23444444432 356777787
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|.++.||.+++|..|. +. .++++|||+. +++++++.+++.|++--.+
T Consensus 381 ll~~~gv~v~~g~~f~-~~--------------------------~~~~iRis~~--~~~e~l~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 381 ILEKTHVVTTPGSGFG-PG--------------------------GEGFVRVSAF--GHRENILEACRRFKQLYKH 427 (432)
T ss_dssp HHHHHCEECEEGGGGC-GG--------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCEEEeCchHhC-CC--------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHhhh
Confidence 7777799999998776 21 1489999974 6999999999999875543
No 149
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.92 E-value=6.6e-24 Score=220.96 Aligned_cols=308 Identities=14% Similarity=0.049 Sum_probs=213.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG---GGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g---~~~~~~vift~sGttaa 152 (609)
..+||+.+... +.++.+.+++.+.+... ..+. + .. ....++|+.++++++ ++++ +|++| +|++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~~--y-~~----~~~~~lr~~la~~~~~~~~~~~-~v~~~-~G~~~a 88 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSD--ALRI--Y-YD----SPDEELIEKILSYLDTDFLSKN-NVSVG-NGADEI 88 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGG--GGGS--C-CC----SSCHHHHHHHHHHHTCSSCCGG-GEEEE-SSHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhh--hhhc--C-CC----CchHHHHHHHHHHcCCCCCCHH-HEEEc-CChHHH
Confidence 57999988774 46788999998876321 0110 1 10 125679999999999 7765 89998 788888
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
+..++.. + || .|++. +.|+++...++..|++++.++.++++.+|+++| .
T Consensus 89 l~~~~~~----------------~--gd--~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l----~------ 137 (335)
T 1uu1_A 89 IYVMMLM----------------F--DR--SVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV----G------ 137 (335)
T ss_dssp HHHHHHH----------------S--SE--EEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC----C------
T ss_pred HHHHHHH----------------h--CC--cEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc----C------
Confidence 9888764 3 55 68899 999999888888999999999887767887776 2
Q ss_pred CceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcc--cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEE
Q 038499 233 RPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV--EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGIL 309 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~--~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L 309 (609)
+++++++++++||||.+.|.+++.++++.+| ++|+|++++.... ..+. ....+.++++.|+||++|.|+ ++|++
T Consensus 138 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~ 214 (335)
T 1uu1_A 138 EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYV 214 (335)
T ss_dssp TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGG--GGTCSSEEEEEESTTTTTCGGGCCEEE
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHH--hhhCCCEEEEecchhhcCCcccCeEEE
Confidence 5899999999999999999999999999989 9999999873211 1121 111245789999999997332 47999
Q ss_pred EEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 038499 310 LMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIE 389 (609)
Q Consensus 310 ~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (609)
++++++ ++.+.+. + ...+++......+. ++ +......+.+.++.+++++
T Consensus 215 ~~~~~~--~~~l~~~--------------------------~-~~~~~~~~~~~~~~-~~-l~~~~~~~~~~~~~~~~~~ 263 (335)
T 1uu1_A 215 VASEKF--IDAYNRV--------------------------R-LPFNVSYVSQMFAK-VA-LDHREIFEERTKFIVEERE 263 (335)
T ss_dssp EECHHH--HHHHHHH--------------------------S-CTTCSCHHHHHHHH-HH-HHTHHHHHHHHHHHHHHHH
T ss_pred EeCHHH--HHHHHHh--------------------------c-CCCCcCHHHHHHHH-HH-hCCHHHHHHHHHHHHHHHH
Confidence 998887 2222110 0 01123332222211 11 1222245677778888889
Q ss_pred HHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh
Q 038499 390 RALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH 469 (609)
Q Consensus 390 ~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~ 469 (609)
++.+.|+++ ++++..+ ..+++++.+ + . .+...+.+.|.+ .||.++++
T Consensus 264 ~l~~~L~~~-g~~~~~~----~~~~~~~~~-~-~----------------~~~~~~~~~l~~-~gi~v~~~--------- 310 (335)
T 1uu1_A 264 RMKSALREM-GYRITDS----RGNFVFVFM-E-K----------------EEKERLLEHLRT-KNVAVRSF--------- 310 (335)
T ss_dssp HHHHHHHHH-TCCBCCC----CSSEEEEEC-C-T----------------HHHHHHHHHHHH-HTEEEEEE---------
T ss_pred HHHHHHHHC-CcEEcCC----CCeEEEEEC-C-C----------------CCHHHHHHHHHH-CCEEEEEC---------
Confidence 999888776 5655322 234444333 3 1 245678888866 59999841
Q ss_pred hhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 470 HLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 470 ~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
++++|||++ +.+|+++++++|+++
T Consensus 311 -------------------------~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 311 -------------------------REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp -------------------------TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred -------------------------CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 378999996 678999999998753
No 150
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.92 E-value=2.4e-23 Score=220.81 Aligned_cols=350 Identities=12% Similarity=-0.019 Sum_probs=216.8
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHH-HHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYI-KKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~i-a~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
+.++.+.+++.+.+..-+ . +..+ ....++++.+ ++++|. .. +++++++|+. +++.++..++
T Consensus 13 ~~~~~i~~a~~~~~~~~~----~--~~~~----~~~~~l~~~~~a~~~g~-~~-~~v~~~sgt~-al~~al~~l~----- 74 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHI----Y--TNYG----PINQRFEQTIMSGFFQN-RG-AVTTVANATL-GLMAAIQLKK----- 74 (377)
T ss_dssp CCGGGGHHHHHHHHHHTC----C--SSSC----HHHHHHHHHHHHHTSTT-CS-EEEEESCHHH-HHHHHHHHHS-----
T ss_pred CCcHHHHHHHHHHHHcCC----c--ccCC----HHHHHHHHHHHHHHhCC-CC-eEEEeCCHHH-HHHHHHHHcC-----
Confidence 455667777776664211 0 0011 2367889999 999993 22 6788867665 6777766654
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCC--ceEEEEeccc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKR--PILGSFSACS 243 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~--~~lv~~s~~s 243 (609)
+++|| .|+++.++|+++...++..|++++.+++++ ++.+|+++|++++.. ++ |++++ ++
T Consensus 75 ---------~~~Gd--~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~tk~v~---~~ 136 (377)
T 3ju7_A 75 ---------RKKGK--YALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEE----LKEEVAIVV---PY 136 (377)
T ss_dssp ---------CTTCC--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHH----HGGGEEEEC---CB
T ss_pred ---------CCCcC--EEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhc----CCCCceEEE---EE
Confidence 47899 799999999999999999999999999984 789999999999942 34 88776 56
Q ss_pred CccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCC--CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQ--TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 244 n~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~--~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
|+||...|+++|.++|+ ||+++|+|++|+.+... +..... ..+++++++++||+++++ ..|+++.+++.. .+.+
T Consensus 137 ~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~-~~~~~g~~~~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l-~~~~ 212 (377)
T 3ju7_A 137 ATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMN-GGMHYGQDFSGMIIYSFHATKPFGIG-EGGLIYSKNEED-IQRI 212 (377)
T ss_dssp CGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEE-TTEETTTTCSSEEEEECBTTSSSCCB-SCEEEEESCHHH-HHHH
T ss_pred CCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeE-CCEeccCCCCcEEEEECCCCCcCCCC-CcEEEEECCHHH-HHHH
Confidence 78999999999999999 99999999999877542 222210 113444555578999974 457877765431 1122
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCce
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNI 401 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i 401 (609)
.....+|.. ..| .........++.++.+.+. +. .....+.+.++.+++++++.+.|++++++
T Consensus 213 ~~~~~~g~~-----------~~~-~~~~~g~~~~~~~~~aa~~----~~--~l~~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 213 KRMGNFGFD-----------TNR-ECTMMGFNCKMSEYAAAIG----IA--TMKKWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp HHHTBTTBC-----------TTS-CBCSSCCBCCCCHHHHHHH----HH--HHHTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHhcCCC-----------CCC-ceeeccccCCCCHHHHHHH----HH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 222221111 000 0001122233444433221 11 12346677788888899999999877654
Q ss_pred EE-eCCCCCCCc-ceE-EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc--ccCC-hhhhhhcCCC
Q 038499 402 KI-LGNTSTKRQ-AIL-SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC--ACAG-PYGHHLLDLD 475 (609)
Q Consensus 402 ~v-~~~~~~~r~-~~~-~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~--~ca~-p~~~~ll~i~ 475 (609)
.+ +.+...... ..+ .+.+.. . .+.+.+.+.|.+ .||.++.+. .|.. |....+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~l~~~L~~-~gI~~~~~~~~~~~~~~~~~~~~~~~ 336 (377)
T 3ju7_A 275 KKGWQLQKTEAVIQQFMPILCPE-E----------------VRNKQVIEDLKK-QKIEARLYFSPSCHQQVLFRNYKSTD 336 (377)
T ss_dssp TTTCBCCCCSCBCCSSEEEECCT-T----------------SCHHHHHHHHHT-TTBCCBCTTSSCGGGSGGGTTSCBSC
T ss_pred cccccCCCCCcceEEEEEEEeCC-h----------------hhHHHHHHHHHH-CCCceecccCCccccchhhhcCCCCC
Confidence 21 112111111 112 222222 1 247889999966 599999875 3321 1111110011
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+.++.+ ..+.+||+++..+|++|+++++++|++++..
T Consensus 337 ~p~~~~~-----------~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 337 LTRTNKI-----------AKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp CHHHHHH-----------HHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred CHHHHHH-----------HhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1222222 1478999999999999999999999877654
No 151
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.92 E-value=2.1e-23 Score=224.17 Aligned_cols=307 Identities=13% Similarity=-0.003 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH--HHHHHhcccchhhHHHHHHhhhc--C---------CCceEEEECCC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK--RLQEVMGIAVPSILREKLIKCLR--D---------EERWVVFVGPH 189 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~--~l~~~l~~~~~~~~~~~~~~~l~--~---------gd~~~Vlv~~~ 189 (609)
..++|+.++++++++++ +|++| +|+++++. .++.++. . + || .|++..+
T Consensus 72 ~~~lr~~ia~~~~~~~~-~i~~t-~G~~~al~~~~~~~~l~---------------~~~~g~~~~~~~~gd--~Vlv~~p 132 (423)
T 3ez1_A 72 LPSARALFAGYLDVKAE-NVLVW-NNSSLELQGLVLTFALL---------------HGVRGSTGPWLSQTP--KMIVTVP 132 (423)
T ss_dssp CHHHHHHHHHHTTSCGG-GEEEC-SSCHHHHHHHHHHHHHH---------------TCCTTCSSCGGGGCC--EEEEEES
T ss_pred hHHHHHHHHHHhCCChh-hEEEe-CCcHHHHHHHHHHHHHh---------------ccCCCccccccCCCC--EEEEcCC
Confidence 56789999999999887 89998 78888887 6666652 4 5 46 7999999
Q ss_pred CccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEE-ecccCccccccCHH---HHHHHH-HHhCC
Q 038499 190 EHHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSF-SACSNVTGIYSDTR---SIARLL-HQYGG 264 (609)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~-s~~sn~TG~~~dl~---~I~~la-~~~g~ 264 (609)
.|+.+...++..|++++.++.+.++ +|+++|++++++. ++++++++ ++++||||.+.|.+ +|+++| ++||+
T Consensus 133 ~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~---~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~ 208 (423)
T 3ez1_A 133 GYDRHFLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTD---PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDF 208 (423)
T ss_dssp CCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSC---TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTC
T ss_pred CcHHHHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhC---CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCC
Confidence 9999998999999999999998765 9999999999521 57888864 58999999999977 788888 89999
Q ss_pred eEEEeccccCCcc-------cccCCCC----CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEe
Q 038499 265 FACFDFAASGPYV-------EIDVRSG----QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 265 ~vivD~A~~~~~~-------~id~~~~----~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
++|+|++++.... ..++..+ ...+.++++.|+||+++++.++|++++++++ ++.+...
T Consensus 209 ~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~--~~~~~~~--------- 277 (423)
T 3ez1_A 209 TIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDN--IRWLSKY--------- 277 (423)
T ss_dssp EEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHH--HHHHHHH---------
T ss_pred EEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHH--HHHHHHH---------
Confidence 9999999873211 1111100 1125678899999985544569999999887 2222111
Q ss_pred ecccccccccccccccccccCCChhHHHHH-HHHHHHHHHH-hcCHH----HHHHHHHHHHHHHHHHhCCCC-ceEEeCC
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFWVKE-YIGHE----VIKKQEETYIERALERLLPNQ-NIKILGN 406 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~~~~-~~g~~----~i~~~~~~l~~~~~~~L~~~p-~i~v~~~ 406 (609)
......+++.+.+.+ .+++.-+... ....+ .+.++...+.+.+.+.|..++ ++++..+
T Consensus 278 ---------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p 342 (423)
T 3ez1_A 278 ---------------LGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLP 342 (423)
T ss_dssp ---------------HHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCC
T ss_pred ---------------HhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCC
Confidence 000111222333321 1111110000 01112 223334444555566666665 4777654
Q ss_pred CCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHH
Q 038499 407 TSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSA 485 (609)
Q Consensus 407 ~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~ 485 (609)
..+++.+...+ . .+...+.+.|.+ .||.+++ |..|... ..
T Consensus 343 ----~~g~~~~~~~~-~----------------~~~~~~~~~l~~-~gv~v~~~g~~~~~~--~~--------------- 383 (423)
T 3ez1_A 343 ----KGGYFISLDTA-E----------------PVADRVVKLAEA-AGVSLTPAGATYPAG--QD--------------- 383 (423)
T ss_dssp ----SBSSCEEEEES-S----------------SCHHHHHHHHHH-TTEECCCTTTTSSTT--CC---------------
T ss_pred ----CccEEEEEECC-C----------------CcHHHHHHHHHH-CCcEEecCcccccCC--CC---------------
Confidence 23444444333 1 146778888854 6999998 5555311 00
Q ss_pred HhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 486 IQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 486 ~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..++++||+++.. ++++++.++++|+++++..
T Consensus 384 -------~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 384 -------PHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp -------SSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHH
Confidence 0258999999766 9999999999999988653
No 152
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.92 E-value=1.4e-23 Score=223.96 Aligned_cols=344 Identities=11% Similarity=-0.007 Sum_probs=220.4
Q ss_pred ceEEecCCCCC-CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHH--hC-CCCCCcEEEeCChHHHH
Q 038499 77 RLTYADHTASG-RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKC--LG-GGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 77 ~~vyld~~a~g-~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~--~g-~~~~~~vift~sGttaa 152 (609)
.+++++.+... +.++.+.+++.+.+.....+.....|.. .....++++.++++ .| .+++ +|+++ +|++++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~----~~g~~~lr~~la~~l~~g~~~~~-~v~~~-~G~~~a 107 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGP----DFGLPALRQKLSEDFYRGFVDAK-EIFIS-DGAKVD 107 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCC----TTCCHHHHHHHHHTTSTTSSCGG-GEEEE-SCHHHH
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC----CCCCHHHHHHHHHHHHcCCCCHH-HEEEc-cChHHH
Confidence 57888877654 5677888888877653211111111111 12246788889998 47 5665 89998 788888
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce-EEEEecCCCCCCCHHHHHHHHhhhccC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE-VVEIGLDDDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~-vv~v~~~~~g~ld~e~L~~al~~~~~~ 231 (609)
+..++..+ .+|| .|++..+.|+++...++..|++ ++.++.++++.++.+ +++ +
T Consensus 108 l~~~~~~~----------------~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-l~~-~------ 161 (400)
T 3asa_A 108 LFRLLSFF----------------GPNQ--TVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPE-FPE-D------ 161 (400)
T ss_dssp HHHHHHHH----------------CSSC--EEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCC-CCT-T------
T ss_pred HHHHHHHc----------------CCCC--EEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccC-hhh-c------
Confidence 88875543 5788 6888889999988888889999 999998754322221 211 1
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEecccc-CC---cccccCCCCCC-CCccEEEEcCCCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAAS-GP---YVEIDVRSGQT-DGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~-~~---~~~id~~~~~~-~~~D~v~~S~hK~lggp 303 (609)
++++++++++++||||.+.| +++|+++|++||+++|+|++++ .. ..+.++..+.. .+.++++.|++|++|.|
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 241 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFA 241 (400)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTT
T ss_pred cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCc
Confidence 46889999999999999988 5568899999999999999987 32 12233332210 12358889999999733
Q ss_pred -CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHH
Q 038499 304 -GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKK 382 (609)
Q Consensus 304 -~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~ 382 (609)
.++|++++++++ ..... ... ..... .......++++......+ .++ +.+. ..+.+.+
T Consensus 242 GlriG~~~~~~~~--~~~~~-----~~~-----------~~~~~-~~~~~~~~~~~~~~~~a~-~~~-l~~~-~~~~~~~ 299 (400)
T 3asa_A 242 GIRLGWTVIPQEL--TYADG-----HFV-----------IQDWE-RFLSTTFNGASIPAQEAG-VAG-LSIL-PQLEAIH 299 (400)
T ss_dssp TCCCEEEECCTTC--BCTTS-----CBH-----------HHHHH-HHHHHHCCCCCHHHHHHH-HHH-HHHT-TTCHHHH
T ss_pred chheeEEeeChhh--ccchh-----hhH-----------HHHHH-HHhccCccCCChHHHHHH-HHH-hCcH-HHHHHHH
Confidence 348999998877 22110 000 00000 001111233333332222 222 2222 5667788
Q ss_pred HHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc
Q 038499 383 QEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA 462 (609)
Q Consensus 383 ~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ 462 (609)
+.+++++++.+.|+++ ++++..+. ...++++.+.+.+ .+...+.+.|.+++||.+++|..
T Consensus 300 ~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gv~v~~g~~ 359 (400)
T 3asa_A 300 YYRENSDLLRKALLAT-GFEVFGGE---HAPYLWVKPTQAN----------------ISDRDLFDFFLREYHIAITPGIG 359 (400)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEECS---SSSEEEEECCCTT----------------CCTTTHHHHHHHHHSEECEEGGG
T ss_pred HHHHHHHHHHHHHHHC-CCeeeCCC---CceEEEEeccCCC----------------CCHHHHHHHHHHhCCEEEeChhH
Confidence 8888999999999877 78887542 2344444413301 23446777776667999999887
Q ss_pred cCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 463 CAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 463 ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
|. +. .++++|||+ +.++++++.++++|+++++
T Consensus 360 f~-~~--------------------------~~~~iRis~--~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 360 FG-RS--------------------------GSGFVRFSS--LGKREDILAACERLQMAPA 391 (400)
T ss_dssp GC-GG--------------------------GTTCEEEEC--CSCHHHHHHHHHHHHC---
T ss_pred hC-CC--------------------------CCCEEEEEe--eCCHHHHHHHHHHHHHHHH
Confidence 75 21 147899994 5799999999999988764
No 153
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.3e-23 Score=227.98 Aligned_cols=343 Identities=17% Similarity=0.175 Sum_probs=217.5
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHHHHHHHHH-HHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTTNMVHEAS-NYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~~~~~e~r-~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+.++.|.+++.+.+...| +++... ++.+....+..+++. +++++++|++. ..+++++|+. ++..++.++
T Consensus 55 ~~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~g~~~~~~~e~~a~~~la~~~g~~~--~~v~~~sGs~-a~~~a~~~~--- 127 (447)
T 3h7f_A 55 NFVPRAVLQAQGSVLTNKYAEGLPGRR-YYGGCEHVDVVENLARDRAKALFGAEF--ANVQPHSGAQ-ANAAVLHAL--- 127 (447)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEE-SSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHH-HHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHhcCCccccCCccc-ccCccHHHHHHHHHHHHHHHHHcCCCc--eEEEeCCHHH-HHHHHHHHh---
Confidence 4558889999988775444 333321 223433444445444 99999999874 2343557876 566665554
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHH-H----HHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEE
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-S----WRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~----~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+++|| .|++...+|+++.. . ....+..++.+++++ ++.+|+++|++++.+ .+++++
T Consensus 128 ------------~~~Gd--~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~~i 189 (447)
T 3h7f_A 128 ------------MSPGE--RLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALE----FRPKVI 189 (447)
T ss_dssp ------------CCTTC--EEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHH----HCCSEE
T ss_pred ------------cCCCC--EEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHh----cCCeEE
Confidence 47899 68988888877321 1 222345667777764 678999999999974 468899
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhc
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQ 317 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~ 317 (609)
+++.++|+++. |+++|.++|++||+++|+|++|+.+............++|++++|+||+++||.| |+++.++++.
T Consensus 190 ~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~g-G~i~~~~~~~- 265 (447)
T 3h7f_A 190 IAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRS-GLIVGKQQYA- 265 (447)
T ss_dssp EEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSC-EEEEECGGGH-
T ss_pred EEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCe-EEEEECHHHH-
Confidence 99889998876 9999999999999999999998654321111111113679999999999999987 9999998762
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
+.+.+.. .....+++.......++.++......+.+.+.++..++++++.+.|.+
T Consensus 266 -~~l~~~~------------------------~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (447)
T 3h7f_A 266 -KAINSAV------------------------FPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMA 320 (447)
T ss_dssp -HHHHHHH------------------------TTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -HHHhhhc------------------------CCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2221110 001124444333333332332111224567788888999999999987
Q ss_pred C----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcC
Q 038499 398 N----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLD 473 (609)
Q Consensus 398 ~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~ 473 (609)
. ++++++... ....++.+.+.+ . .+....+.+.| ++.||.++.......+. ..+
T Consensus 321 ~~~~~~g~~~~~~~--~~~~~~~~~~~~-~---------------~~~~~~~~~~l-~~~GI~v~~~~i~~~~~-~p~-- 378 (447)
T 3h7f_A 321 PDVAKAGVSVVSGG--TDVHLVLVDLRD-S---------------PLDGQAAEDLL-HEVGITVNRNAVPNDPR-PPM-- 378 (447)
T ss_dssp HHHHHTTCEEGGGS--CSSSEEEEECTT-S---------------SCCHHHHHHHH-HHTTEECBC--------------
T ss_pred ccccCCCeEEecCC--CCCCEEEEEcCC-C---------------CCCHHHHHHHH-HHCCeEEecccCCCCCC-CCC--
Confidence 6 578887531 122344444433 1 14566777777 55699988322111000 000
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHhc
Q 038499 474 LDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY----MSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 474 i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~----~t~eeid~ll~al~~v~~~~ 525 (609)
.++++|++++.. .+++|+++++++|++++...
T Consensus 379 --------------------~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 379 --------------------VTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp ----------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred --------------------CCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 247899998644 67999999999999887543
No 154
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=8.8e-24 Score=227.51 Aligned_cols=325 Identities=16% Similarity=0.118 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.+++++|.+ +.++++ +| ++++..++..+ +++|| .|+++..+|+++...|
T Consensus 57 ~~~~~~l~~~la~~~g~~--~~v~~~-sG-t~A~~~~l~~~---------------~~~gd--~vi~~~~~~~~~~~~~~ 115 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGK--AALATA-SG-HAAQFLALTTL---------------AQAGD--NIVSTPNLYGGTFNQFK 115 (421)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEES-SH-HHHHHHHHHHH---------------CCTTC--EEEECSCCCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC--ceEEec-CH-HHHHHHHHHHH---------------hCCCC--EEEEeCCCchHHHHHHH
Confidence 356788999999999986 245554 78 55787777665 36888 7999999999998887
Q ss_pred ---HHcCceEEEE-ecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccc-c
Q 038499 199 ---RQSLAEVVEI-GLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA-S 273 (609)
Q Consensus 199 ---~~~G~~vv~v-~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~-~ 273 (609)
+..|++++.+ +.+ |+++|+++|+ +++++|++++++||||.+.|+++|+++||+||+++|+|+++ +
T Consensus 116 ~~~~~~g~~~~~~~~~~-----d~~~l~~~i~-----~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~ 185 (421)
T 2ctz_A 116 VTLKRLGIEVRFTSREE-----RPEEFLALTD-----EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGM 185 (421)
T ss_dssp THHHHTTCEEEECCTTC-----CHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGG
T ss_pred HHHHHcCCEEEEECCCC-----CHHHHHHhhc-----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc
Confidence 6689999999 764 8999999998 68999999999999999999999999999999999999999 7
Q ss_pred CCcccccCCCCCCCCccEEEEcCCCCCCCCCC-cEEEEEec-h--h-h-ccCCCCCCccCCCceEeeccccccccccccc
Q 038499 274 GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS-PGILLMTK-A--L-Y-QLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 274 ~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~L~~~~-~--~-~-~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
.++....+ . .++|++++|+||+++||++ +|++++.+ + + . ++..+.+...|+....+...+. ...|..
T Consensus 186 ~g~~~~~~-~---~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~--~~~~~~- 258 (421)
T 2ctz_A 186 GGYLLRPL-A---WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFG--ELAFIV- 258 (421)
T ss_dssp GGTSCCGG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHG--GGHHHH-
T ss_pred ccccCCcc-c---cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcc--hhHHHH-
Confidence 76422111 1 2689999999999998764 77777752 2 1 0 0011223333322211110000 000111
Q ss_pred cccccc----CC-ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeC-CCC-------------
Q 038499 348 IEERES----GG-TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILG-NTS------------- 408 (609)
Q Consensus 348 ~~~r~~----~g-tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~-~~~------------- 408 (609)
..+++ .| ..+... +.+... .....+...++..++++++.+.|+++|+++++. +..
T Consensus 259 -~~r~~~~~~~g~~~~~~~---a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~ 332 (421)
T 2ctz_A 259 -KARVDGLRDQGQALGPFE---AWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYF 332 (421)
T ss_dssp -HHHHTHHHHHCCCCCHHH---HHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHH
T ss_pred -HHHHHHHHhcCCCCCHHH---HHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhc
Confidence 01111 11 111111 111111 111233344555688999999999999998763 211
Q ss_pred -CCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---h--hhhhhcCCChhHHHHH
Q 038499 409 -TKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---P--YGHHLLDLDEAQSYQI 482 (609)
Q Consensus 409 -~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p--~~~~ll~i~~~~~~~~ 482 (609)
..+.++++|.+.. .. .....+.+.| +.++|.++.|..|.- | ..|. .+..+....
T Consensus 333 ~~~~g~ivsf~l~~-~~---------------~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~--~~~~~~~~~- 392 (421)
T 2ctz_A 333 KGKPGAVLTFGLKG-GY---------------EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHS--QLSPEEQAQ- 392 (421)
T ss_dssp TTCCCSEEEEEETT-HH---------------HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTT--TSCHHHHHH-
T ss_pred cCCCceEEEEEeCC-CH---------------HHHHHHHHhC-CcceecccCCCCCceeeCCcccccc--cCCHHHHHh-
Confidence 2357789998865 10 0123344444 235667777744331 1 1221 122111111
Q ss_pred HHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 038499 483 RSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEF 520 (609)
Q Consensus 483 ~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~ 520 (609)
.|+.++.||+|++.+. ++.+++.|++
T Consensus 393 --------~g~~~~~vRlS~g~e~----~~~li~~l~~ 418 (421)
T 2ctz_A 393 --------AGVSPEMVRLSVGLEH----VEDLKAELKE 418 (421)
T ss_dssp --------HTCCTTEEEEECCSSC----HHHHHHHHHH
T ss_pred --------cCCCCCeEEEEeCCCC----HHHHHHHHHH
Confidence 2345699999998754 4555555544
No 155
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.91 E-value=4.5e-23 Score=222.90 Aligned_cols=367 Identities=12% Similarity=0.036 Sum_probs=222.4
Q ss_pred CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhh
Q 038499 88 RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 88 ~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (609)
...+.+.+++.+.+...+ +..+ ....++++.+++++|.+ +++++++|+ +++..++.++......
T Consensus 40 ~~~~~~~~a~~~~~~~~~-------~~~~----~~~~~l~~~la~~~g~~---~~i~~~sGt-~a~~~al~~l~~~~~~- 103 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDGW-------LTTG----RFNDAFEKKLGEYLGVP---YVLTTTSGS-SANLLALTALTSPKLG- 103 (437)
T ss_dssp CCCHHHHHHHHHHHHHCC-------CBSC----HHHHHHHHHHHHHHTCS---EEEEESCHH-HHHHHHHHHTTCGGGG-
T ss_pred CCCHHHHHHHHHHHHcCC-------cCCC----hHHHHHHHHHHHHHCCC---cEEEeCCHH-HHHHHHHHHhhhcccc-
Confidence 345677788877664311 1122 24678999999999986 467777887 5788877765200000
Q ss_pred HHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCcc
Q 038499 168 LREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVT 246 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T 246 (609)
+ ..+++|| .|+++.++|+++...++..|++++.+++++ ++.+|+++|+++++ ++++++++++ ++
T Consensus 104 -~----~~~~~gd--~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~---~~ 168 (437)
T 3bb8_A 104 -V----RALKPGD--EVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVS-----DKTKAIMIAH---TL 168 (437)
T ss_dssp -G----GSCCTTC--EEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCC-----TTEEEEEEEC---GG
T ss_pred -c----ccCCCcC--EEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcC-----CCCeEEEEeC---CC
Confidence 0 0036787 799999999999999999999999999876 68899999999997 5789988875 56
Q ss_pred ccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEechhhc--cCCCC
Q 038499 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMTKALYQ--LGSFP 322 (609)
Q Consensus 247 G~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~~~~~~--l~~~~ 322 (609)
|...|+++|.++|++||+++|+|++++.+... +..... ...|++++|++ |.++|+. .|+++.+++... +..+.
T Consensus 169 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~s~~~~k~l~~g~-gg~~~~~~~~~~~~~~~~~ 245 (437)
T 3bb8_A 169 GNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAG-TFGDIGTVSFYPAKHITMGE-GGAVFTQSAELKSIIESFR 245 (437)
T ss_dssp GCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSTTSSSCCSS-CEEEEESCHHHHHHHHHHH
T ss_pred CChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecc-cccCEEEEECcCCcCCCCCC-eEEEEeCCHHHHHHHHHHH
Confidence 77899999999999999999999999977655 444331 12688777753 3344433 488888765411 00011
Q ss_pred CCccC----CCceEee-ccccc---ccc-cccccc---cccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 038499 323 PSTCG----GGTVNYV-NGFNE---KDT-LYLEDI---EERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIER 390 (609)
Q Consensus 323 p~~~g----gg~v~~~-~~~~~---~~~-~~~~~~---~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (609)
+...+ ++.-... ..+.. ... .|.... ...+..++.++.+.+.. +. + +. .+...++.++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l--~~-l-~~--~~~~~~~~~~~~~~ 319 (437)
T 3bb8_A 246 DWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGL--AQ-L-ER--IEEFVEKRKANFKY 319 (437)
T ss_dssp BTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHH--HH-H-HH--HHHHHHHHHHHHHH
T ss_pred HhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHH--HH-H-HH--HHHHHHHHHHHHHH
Confidence 11100 0000000 00000 000 000000 00111223344443221 11 1 11 23444555888999
Q ss_pred HHHHhCCCCceEEeCCCCCCCc-c--eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcc--cC-
Q 038499 391 ALERLLPNQNIKILGNTSTKRQ-A--ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCA--CA- 464 (609)
Q Consensus 391 ~~~~L~~~p~i~v~~~~~~~r~-~--~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~--ca- 464 (609)
+.+.|++++++.++......+. + ++.+.+.. +. ..+...+.+.|.+ .||.++.+.. |.
T Consensus 320 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~l~~~L~~-~GI~v~~~~~~~~~~ 383 (437)
T 3bb8_A 320 LKDALQSCADFIELPEATENSDPSWFGFPITLKE-DS--------------GVSRIDLVKFLDE-AKVGTRLLFAGNLTR 383 (437)
T ss_dssp HHHHGGGGTTTEECCCCCTTEECCCSSEEEEECG-GG--------------SSCHHHHHHHHHH-TTBCCBCCTTSSGGG
T ss_pred HHHHhhccCCccccCCCCCCCceeeEEEEEEECC-cC--------------cCcHHHHHHHHHH-CCCceeccCCccccc
Confidence 9999999888776643211121 2 33443332 10 1467889999966 5999998754 32
Q ss_pred Chhhhh-----hcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 465 GPYGHH-----LLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 465 ~p~~~~-----ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.|.... +..+ +.+.++ ..+.+||+++.++|++|+++++++|+++++
T Consensus 384 ~p~~~~~~~~~~~~~--~~~~~~-----------~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 384 QPYFHDVKYRVVGEL--TNTDRI-----------MNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp SGGGSSCCCEECSCC--HHHHHH-----------HHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CchhhccCccccCCC--cHHHHH-----------hcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 231110 1112 122211 136899999999999999999999998764
No 156
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=1e-23 Score=224.52 Aligned_cols=161 Identities=19% Similarity=0.206 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-
Q 038499 120 TNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW- 198 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (609)
.....++++.+++++|.+ +++++++|+ +++..++..+ +++|| .|+++...|+++...|
T Consensus 58 ~~~~~~l~~~la~~~g~~---~~i~~~sG~-~ai~~~~~~~---------------~~~gd--~vl~~~~~y~~~~~~~~ 116 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA---GSAAFGSGM-GAISSSTLAF---------------LQKGD--HLIAGDTLYGCTVSLFT 116 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHH-HHHHHHHTTT---------------CCTTC--EEEEESSCCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHH---------------hCCCC--EEEEeCCCchHHHHHHH
Confidence 455788999999999986 344555787 6787776654 36888 6999999999987775
Q ss_pred ---HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCC
Q 038499 199 ---RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (609)
Q Consensus 199 ---~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~ 275 (609)
+..|++++.++.. |+++|+++++ ++++++++++++||||.+.|+++|+++|++||+++|+|++++.+
T Consensus 117 ~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~ 186 (389)
T 3acz_A 117 HWLPRFGIEVDLIDTS-----DVEKVKAAWK-----PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSP 186 (389)
T ss_dssp HHHHHTTCEEEEECTT-----CHHHHHHTCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCT
T ss_pred HHHHHcCCEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 5679999999863 8999999998 57999999999999999999999999999999999999999876
Q ss_pred cccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEec-hh
Q 038499 276 YVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTK-AL 315 (609)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~-~~ 315 (609)
.....+. .+.|+++.|+||+++||++ .|++++++ ++
T Consensus 187 ~~~~~~~----~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~ 225 (389)
T 3acz_A 187 CFLKPLE----LGADIALHSVSKYINGHGDVIGGVSSAKTAED 225 (389)
T ss_dssp TTCCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEESSHHH
T ss_pred cccCccc----cCCeEEEECChhhccCCCCceeEEEEECcHHH
Confidence 5321121 2689999999999999876 59999998 76
No 157
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=1.9e-23 Score=237.45 Aligned_cols=321 Identities=13% Similarity=0.098 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHH
Q 038499 122 MVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQ 200 (609)
Q Consensus 122 ~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~ 200 (609)
.+.++++.+|+++|++. .++++ +|+++++..++.++ +++|| .|+++..+|.++... ++.
T Consensus 174 ~i~e~e~~lA~~~gae~--~i~v~-nGtt~an~~ai~al---------------~~pGD--~VLv~~~~H~S~~~~~~~l 233 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK--TYFVL-GGSSNANNTVTSAL---------------VSNGD--LVLFDRNNHKSVYNSALAM 233 (730)
T ss_dssp HHHHHHHHHHHHTTCSE--EEEES-SHHHHHHHHHHHHH---------------CCTTC--EEEEETTCCHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHCCCc--EEEEC-CHHHHHHHHHHHHh---------------cCCCC--EEEEcCCchHHHHHHHHHH
Confidence 57899999999999963 45555 89988888888776 47899 799999999999988 788
Q ss_pred cCceEEEEecCCC-----CCCCHHHH-----HHHHhhhc-c---CCCc-eEEEEecccCccccccCHHHHHHHHHHhCCe
Q 038499 201 SLAEVVEIGLDDD-----GLLDIEAL-----RSKLELYK-D---AKRP-ILGSFSACSNVTGIYSDTRSIARLLHQYGGF 265 (609)
Q Consensus 201 ~G~~vv~v~~~~~-----g~ld~e~L-----~~al~~~~-~---~~~~-~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~ 265 (609)
.|++++.++.+.+ |.+|+++| +++|++.. . ..++ ++++++++ |++|.+.|+++|+++||+||++
T Consensus 234 ~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~ 312 (730)
T 1c4k_A 234 AGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDY 312 (730)
T ss_dssp TCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSE
T ss_pred CCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCe
Confidence 9999999876432 34788888 88887420 0 1122 88999987 6899999999999999999999
Q ss_pred EEEeccccCC--cc-------cccCCCCCCCCcc----EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceE
Q 038499 266 ACFDFAASGP--YV-------EIDVRSGQTDGYD----AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVN 332 (609)
Q Consensus 266 vivD~A~~~~--~~-------~id~~~~~~~~~D----~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~ 332 (609)
+++|+||+.+ .. ++++.. .++| +++.|+||+++||.+.|+++++++. +......
T Consensus 313 livDeAh~~~~~f~~~~~g~~~l~~~~---~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~--l~g~~~~-------- 379 (730)
T 1c4k_A 313 IEFDSAWVGYEQFIPMMRNSSPLLIDD---LGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSH--IKGQLRY-------- 379 (730)
T ss_dssp EEEECTTCCGGGSSGGGGGGCTTSCCC---CCTTSCEEEEEECHHHHSSCCTTCEEEEEECGG--GTTSTTC--------
T ss_pred EEEEcccccccccCcccCCcCcccccc---cCCCCCCEEEEECCCCCCCCCCCEEEEEecchh--hcCcccc--------
Confidence 9999998742 11 122211 1566 9999999999999888999999887 3210000
Q ss_pred eecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHhCC-CCceEEeCCCC
Q 038499 333 YVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEY-IGHEVIKKQEETYIERALERLLP-NQNIKILGNTS 408 (609)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~-~g~~~i~~~~~~l~~~~~~~L~~-~p~i~v~~~~~ 408 (609)
+ +...+.........++|+...+. .+++.++ .. .| +...++..++++++++.|.+ +++++++++..
T Consensus 380 -i------~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l--~~~~g-~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~ 449 (730)
T 1c4k_A 380 -C------DHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQ--EGEAG-RKLWHDLLITTIEARKKLIKAGSMFRPFVPPV 449 (730)
T ss_dssp -C------CHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH--SHHHH-HHHHHHHHHHHHHHHHHHHHTTCSSEESSCSE
T ss_pred -c------CHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH--Hhhhh-HHHHHHHHHHHHHHHHHHhhhCCCeEEccccc
Confidence 0 00001111123445677655443 3344433 22 23 34457788889999999987 78999987631
Q ss_pred C-------------------------------C-C-c------ce-EEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 409 T-------------------------------K-R-Q------AI-LSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 409 ~-------------------------------~-r-~------~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
. . . . |+ +++... +.+ .....-.+..+++..+.+.
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~p--g~~----~~~g~~~~~g~~~~~l~~~ 523 (730)
T 1c4k_A 450 VNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTP--GIN----PETGDYEDFGVPATIVANY 523 (730)
T ss_dssp ETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECS--SEE----TTTTEECSSCCCHHHHHHH
T ss_pred cccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeC--Ccc----cccccccccCCCHHHHHHH
Confidence 0 0 0 0 11 333331 100 0000001223678899999
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
|.+. ||.++.. ..+.+|++++.++|++++++++++|+++.+...
T Consensus 524 L~e~-GI~v~~~---------------------------------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 524 LRDH-GIIPEKS---------------------------------DLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHT-TCCCSEE---------------------------------CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHC-CcEEEEC---------------------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 9765 9988621 147899999999999999999999999987543
No 158
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.91 E-value=8.2e-23 Score=219.26 Aligned_cols=310 Identities=16% Similarity=0.130 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW 198 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (609)
......+++++++++.|.+ +++++++|+. ++..++..+ +++|| .|+++...|+++...+
T Consensus 79 ~~p~~~~l~~~la~~~g~~---~~~~~~sG~~-Ai~~al~~l---------------~~~Gd--~Vi~~~~~y~~~~~~~ 137 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAP---AAFATASGMA-AVFTSLGAL---------------LGAGD--RLVAARSLFGSCFVVC 137 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCS---EEEEESSHHH-HHHHHHHTT---------------CCTTC--EEEEESCCCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHCCC---cEEEECCHHH-HHHHHHHHH---------------hCCCC--EEEEcCCccchHHHHH
Confidence 3456788999999999973 5677767754 677766655 47898 6999999999987777
Q ss_pred HH----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 199 RQ----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 199 ~~----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
+. .|++++.++.+ |+++|+++++ +++++|++++++||||.+.|+++|+++|++||+++|+|++++.
T Consensus 138 ~~~~~~~g~~~~~v~~~-----d~~~l~~ai~-----~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~ 207 (414)
T 3ndn_A 138 SEILPRWGVQTVFVDGD-----DLSQWERALS-----VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFAT 207 (414)
T ss_dssp HTHHHHTTCEEEEECTT-----CHHHHHHHTS-----SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH
T ss_pred HHHHHHcCcEEEEeCCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcc
Confidence 54 89999999876 8999999998 6899999999999999999999999999999999999999886
Q ss_pred CcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEEEEEechhhccC-CCCCCccCCCceEeeccccccccccccccccc
Q 038499 275 PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGILLMTKALYQLG-SFPPSTCGGGTVNYVNGFNEKDTLYLEDIEER 351 (609)
Q Consensus 275 ~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~L~~~~~~~~l~-~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r 351 (609)
+.....+ . .++|+++.|++|++||++. .|+++++++. +. .+... .+
T Consensus 208 ~~~~~~~-~---~g~div~~S~sK~l~~~G~~~~G~vv~~~~~--~~~~l~~~-------------------------~~ 256 (414)
T 3ndn_A 208 PLLQQGF-P---LGVDVVVYSGTKHIDGQGRVLGGAILGDREY--IDGPVQKL-------------------------MR 256 (414)
T ss_dssp HHHCCCG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECHHH--HTTHHHHH-------------------------HH
T ss_pred cccCCch-h---cCCCeEeccCCccccCCCCceEEEEEECHHH--HHHHHHHH-------------------------HH
Confidence 5433222 1 2689999999999987553 7999998876 22 11100 00
Q ss_pred ccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceEEE
Q 038499 352 ESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAILSF 417 (609)
Q Consensus 352 ~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~~f 417 (609)
...++.+... +.+.. ......+...++..+.++++.+.|++.|++. +..+.- ....++++|
T Consensus 257 ~~g~~~~~~~---a~~~~--~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~ 331 (414)
T 3ndn_A 257 HTGPAMSAFN---AWVLL--KGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTF 331 (414)
T ss_dssp HHCCCCCHHH---HHHHH--HHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred HcCCCCCHHH---HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEE
Confidence 0112222111 11111 1122344555667778888899998888875 333310 013457788
Q ss_pred EeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---hhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 418 NIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---PYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
.+.+ +.. ........+.+.| +.+++.+..|..|+- |.......+..+... ..|+.
T Consensus 332 ~l~~-~~~-----------~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~g~~ 389 (414)
T 3ndn_A 332 ALDC-PED-----------VAKQRAFEVLDKM-RLIDISNNLGDAKSLVTHPATTTHRAMGPEGRA---------AIGLG 389 (414)
T ss_dssp EECS-CGG-----------GHHHHHHHHHHHC-SSSEECSCCSCSSCEEECGGGTTTCTTHHHHHH---------HTTCC
T ss_pred EEcC-Ccc-----------ccHHHHHHHHHhC-ccceEcCCCCCCCceeeCccccccccCCHHHHH---------hcCCC
Confidence 7754 100 0001245666777 457888888876552 222111112111110 13556
Q ss_pred CcEEEEecCCCCCHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~a 517 (609)
+++||||++....++-++.+.++
T Consensus 390 ~~~iRlsvG~e~~~dli~dl~~a 412 (414)
T 3ndn_A 390 DGVVRISVGLEDTDDLIADIDRA 412 (414)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHH
T ss_pred CCeEEEEeCcCCHHHHHHHHHHh
Confidence 89999999975444444444333
No 159
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.91 E-value=1.1e-22 Score=218.91 Aligned_cols=346 Identities=13% Similarity=0.066 Sum_probs=225.0
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
.|+.+.+++.+.+... . |.. ......++++.+++++|.+ ++++| +|+++++..++.++
T Consensus 30 ~p~~~~~a~~~~~~~~----~---y~~---~~~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~l~~l-------- 87 (424)
T 2po3_A 30 DRARLYERLDRALDSQ----W---LSN---GGPLVREFEERVAGLAGVR---HAVAT-CNATAGLQLLAHAA-------- 87 (424)
T ss_dssp CHHHHHHHHHHHHHHT----C---CSS---SCHHHHHHHHHHHHHHTSS---EEEEE-SCHHHHHHHHHHHH--------
T ss_pred ChHHHHHHHHHHHhcC----C---ccc---CCHHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHc--------
Confidence 3677888887766421 0 111 0234678999999999973 78998 67777888888775
Q ss_pred HHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccc
Q 038499 169 REKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTG 247 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG 247 (609)
.+|| .|+++.++|+++...++..|++++.+++++ ++.+|+++|+++++ +++++++++ |+||
T Consensus 88 --------~~gd--~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~---~~tG 149 (424)
T 2po3_A 88 --------GLTG--EVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-----PRTSAVVGV---HLWG 149 (424)
T ss_dssp --------TCCS--EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-----TTEEEEEEE---CGGG
T ss_pred --------CCCC--EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-----cCCcEEEEE---CCCC
Confidence 3566 699999999999999999999999999986 67899999999987 578888875 4899
Q ss_pred cccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCC--CCCCCCCCcEEEEEe-chhhccCCCCCC
Q 038499 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTH--KFLGGPGSPGILLMT-KALYQLGSFPPS 324 (609)
Q Consensus 248 ~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~h--K~lggp~g~G~L~~~-~~~~~l~~~~p~ 324 (609)
...++++|.++|++||+++|+|++++.+.. .+...... ..|++++|+| |+++| ...|+++.+ +++ ++.+.+.
T Consensus 150 ~~~~l~~i~~la~~~~~~li~Dea~~~g~~-~~~~~~~~-~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l--~~~l~~~ 224 (424)
T 2po3_A 150 RPCAADQLRKVADEHGLRLYFDAAHALGCA-VDGRPAGS-LGDAEVFSFHATKAVNA-FEGGAVVTDDADL--AARIRAL 224 (424)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTS-SSSEEEEECCTTSSSCC-SSCEEEEESCHHH--HHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCEEEEECccccCCe-ECCeeccc-ccCEEEEeCCCCCCccC-CCCeEEEeCCHHH--HHHHHHH
Confidence 999999999999999999999999986543 22222211 2478888877 99986 557999998 565 2222222
Q ss_pred ccCCCceEeecccccccccccccccccccCCCh-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 038499 325 TCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKI 403 (609)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v 403 (609)
...+... .+. ....|.+ .+.+. .+++.+. ...+.+.+.++.+++++++.+.|.++|++++
T Consensus 225 ~~~~~~~-----------~~~-----~~~~g~~~~~~~~-~aa~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 285 (424)
T 2po3_A 225 HNFGFDL-----------PGG-----SPAGGTNAKMSEA-AAAMGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLV 285 (424)
T ss_dssp HBTTTTC-----------TTC-----CTTCCCBCCCCHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEE
T ss_pred HhcCccc-----------ccc-----ccccCcCCCcCHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 1111110 000 0001111 01111 1111221 1223567788888899999999999989998
Q ss_pred eCCCC-CCC-cceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhh--hhcCCC---h
Q 038499 404 LGNTS-TKR-QAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGH--HLLDLD---E 476 (609)
Q Consensus 404 ~~~~~-~~r-~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~--~ll~i~---~ 476 (609)
..+.. ... ..++.+.+.. .. ...+..++.+.|.+ .||.+++. |..+... .+.+++ .
T Consensus 286 ~~~~~~~~~~~~~~~i~~~~-~~-------------~~~~~~~l~~~L~~-~gI~v~~~--~~~~~~~~~~~~~~g~~~~ 348 (424)
T 2po3_A 286 ADHDRHGLNNHQYVIVEIDE-AT-------------TGIHRDLVMEVLKA-EGVHTRAY--FSPGCHELEPYRGQPHAPL 348 (424)
T ss_dssp CCGGGGSCCCCCCEEEEECH-HH-------------HSSCHHHHHHHHHH-TTEECBCT--TCSCGGGSTTTTTSCCCCC
T ss_pred cCCCCCCccccEEEEEEECC-cc-------------chhhHHHHHHHHHH-CCCceecc--cCCccccchhhhhcCCCCC
Confidence 76311 111 1344444431 00 00357788888865 69999873 3211100 010111 0
Q ss_pred hHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 477 AQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
+...++ ....+|++++.++|++|+++++++|+++++...
T Consensus 349 ~~~~r~-----------~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 349 PHTERL-----------AARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp HHHHHH-----------HTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHH-----------hcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 111111 135689998899999999999999999886543
No 160
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.91 E-value=1.5e-23 Score=225.99 Aligned_cols=301 Identities=12% Similarity=0.083 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHh-----CCCCCCc---EEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCL-----GGGQEDA---MIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~-----g~~~~~~---vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..++++.+++++ +++++ + |++| +|+++++..++..+ +++|| .|++..+.|+++
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~~t-~g~~~al~~~~~~l---------------~~~gd--~Vl~~~p~y~~~ 150 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSID-NMSRPIVT-NALTHGLSLVGDLF---------------VNQDD--TILLPEHNWGNY 150 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGG-GBCCCEEE-SHHHHHHHHHHHHH---------------CCTTC--EEEEESSCCTHH
T ss_pred CHHHHHHHHHHHhccCcccCCC-ccceEEEc-CCchHHHHHHHHHH---------------hCCCC--EEEEcCCcCccH
Confidence 456778888888 77776 7 8998 78888999988876 37888 699999999999
Q ss_pred HHHHHH-cCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHH-----hCC
Q 038499 195 LLSWRQ-SLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQ-----YGG 264 (609)
Q Consensus 195 ~~~~~~-~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~-----~g~ 264 (609)
...++. .|++++.++.++ ++.+|+++|++++++. ..+++++++++++||||.+.| +++|+++|++ ||+
T Consensus 151 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~ 228 (430)
T 2x5f_A 151 KLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY--NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKV 228 (430)
T ss_dssp HHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC--CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc--CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCE
Confidence 888888 999999999876 4578999999999842 127899999999999999999 7889999999 999
Q ss_pred eEEEeccccCCccc----ccCC-CC-CCCCc---cEEEEcCCCCCCCCC-CcEEEEE---echhhccCCCCCCccCCCce
Q 038499 265 FACFDFAASGPYVE----IDVR-SG-QTDGY---DAIFLSTHKFLGGPG-SPGILLM---TKALYQLGSFPPSTCGGGTV 331 (609)
Q Consensus 265 ~vivD~A~~~~~~~----id~~-~~-~~~~~---D~v~~S~hK~lggp~-g~G~L~~---~~~~~~l~~~~p~~~ggg~v 331 (609)
++|+|++++..... ..+. .+ ...+. ++++.|+||++|.|+ ++|++++ ++++ ++.+......
T Consensus 229 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~--~~~l~~~~~~---- 302 (430)
T 2x5f_A 229 IAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTT--KEVLEAKVKG---- 302 (430)
T ss_dssp EEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHH--HHHHHHHHHH----
T ss_pred EEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHH--HHHHHHHHhh----
Confidence 99999998753211 1111 11 01234 677889999997443 4799999 8777 2222110000
Q ss_pred EeecccccccccccccccccccCCChhHHHHH--HHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCceEEe
Q 038499 332 NYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALA-FWVKEYIGHEVIKKQEETYIERALERLL----PNQNIKIL 404 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~-~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i~v~ 404 (609)
..+....+++..... .+++. -. .-....+.+.++.+++++++.+.|+ .+ ++++.
T Consensus 303 -----------------~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~ 363 (430)
T 2x5f_A 303 -----------------LIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAY 363 (430)
T ss_dssp -----------------HHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEEC
T ss_pred -----------------hhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Cceee
Confidence 001112233333222 22222 00 0001134477888888999999998 55 78876
Q ss_pred CCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHH
Q 038499 405 GNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRS 484 (609)
Q Consensus 405 ~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~ 484 (609)
.+ ..+++.+...+ + .+...+.+.|.+++||.+++| .
T Consensus 364 ~~----~~g~~~~~~~~-~----------------~~~~~~~~~l~~~~gi~v~~g---~-------------------- 399 (430)
T 2x5f_A 364 DF----NSGYFMAIKVH-D----------------VDPEALRKHLIDKYSIGVIAL---N-------------------- 399 (430)
T ss_dssp CC----CBSSEEEEEES-S----------------SCHHHHHHHHHHHHCEECEEC---S--------------------
T ss_pred CC----CceEEEEeCCC-C----------------CCHHHHHHHHHHhCCEEEecC---C--------------------
Confidence 54 34554443332 1 357788888876569999865 0
Q ss_pred HHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 485 AIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 485 ~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++++||++++ ++++++++++++|+++++.
T Consensus 400 ----------~~~iRis~~~-~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 400 ----------ATDIRIAFSC-VEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp ----------SSEEEEEGGG-SCGGGHHHHHHHHHHHHHH
T ss_pred ----------CCeEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 4799999985 5999999999999998765
No 161
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.91 E-value=9.1e-24 Score=226.23 Aligned_cols=307 Identities=13% Similarity=0.025 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHh------CCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC---ceEEEEC-CCCcc
Q 038499 123 VHEASNYIKKCL------GGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE---RWVVFVG-PHEHH 192 (609)
Q Consensus 123 ~~e~r~~ia~~~------g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd---~~~Vlv~-~~~h~ 192 (609)
..++|+.+++++ +++++ +|++| +|++++++.++..+. ++|| +..|+++ .++|+
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~t~al~~~~~~l~---------------~~gd~~~~~~vi~~~~p~~~ 139 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQ-NIALT-NGSQSAFFYLFNLFA---------------GRRADGSTKKVLFPLAPEYI 139 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHHHHHHHHHHHHS---------------BC----CCBEEEESSCCCHH
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CCcHHHHHHHHHHHc---------------CCCccCCcceEEEeCCCccc
Confidence 445666666665 45565 89999 788889999988773 5654 2257776 88888
Q ss_pred chHHHHHH------cCceEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHh
Q 038499 193 SNLLSWRQ------SLAEVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQY 262 (609)
Q Consensus 193 s~~~~~~~------~G~~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~ 262 (609)
.+...+.. .+..+..++.+. ++.+|+++|+ ++ ++++++++++++||||.+.| +++|+++|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-----~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~ 212 (417)
T 3g7q_A 140 GYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-----EETGMICVSRPTNPTGNVITDEELMKLDRLANQH 212 (417)
T ss_dssp HHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred cchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-----cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 77655432 234455555432 3467888887 55 68999999999999999999 78899999999
Q ss_pred CCeEEEeccccCCcccccCCCC--CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccc
Q 038499 263 GGFACFDFAASGPYVEIDVRSG--QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 263 g~~vivD~A~~~~~~~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
|+++|+|++++.+......... ...+.++++.|+||+.++..++|+++.++++ ++.+...
T Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~--~~~~~~~---------------- 274 (417)
T 3g7q_A 213 NIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKT--ITAIANM---------------- 274 (417)
T ss_dssp TCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCHHH--HHHHHHH----------------
T ss_pred CCEEEEeCCCccccccccccccccCCCCCEEEEEechhccCCCcceEEEEeCHHH--HHHHHHh----------------
Confidence 9999999998753322221111 1135688899999964323358999998887 2222111
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHhCC-CC--ceEEeCCCCCCCc
Q 038499 341 DTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHE-----VIKKQEETYIERALERLLP-NQ--NIKILGNTSTKRQ 412 (609)
Q Consensus 341 ~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~-----~i~~~~~~l~~~~~~~L~~-~p--~i~v~~~~~~~r~ 412 (609)
......+++.+.+.+. .+++ +..... .+.++.++.++++.+.|.+ ++ ++.+..+ ..
T Consensus 275 --------~~~~~~~~~~~~~~~~--~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~ 338 (417)
T 3g7q_A 275 --------NGIISLAPGGMGPAMM--CEMI--KRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKP----EG 338 (417)
T ss_dssp --------HHHHCCCCCSHHHHHH--HHHH--HTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECC----CB
T ss_pred --------hcceeeCCCcHHHHHH--HHHH--cCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCC----Cc
Confidence 0111122223332211 1121 112221 1344455555555555543 34 4677655 23
Q ss_pred ceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 413 AILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+++.+...+ .. ..+...+.+.|.+ .||.+++|..|........ +
T Consensus 339 g~~~~~~~~-~~--------------~~~~~~l~~~l~~-~gi~v~~g~~f~~~~~~~~---~----------------- 382 (417)
T 3g7q_A 339 AIFLWLWFK-DL--------------PITTELLYQRLKA-RGVLMVPGHYFFPGLDKPW---P----------------- 382 (417)
T ss_dssp SSEEEEECT-TC--------------SSCHHHHHHHHHH-TTEECEEGGGGCTTBSSCC---G-----------------
T ss_pred ceEEEEEcC-CC--------------CCCHHHHHHHHHH-CCEEEECchhhCCCCcccc---c-----------------
Confidence 444444433 10 1467889988854 6999999988763210000 0
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
..++++|||++. ++++++.++++|+++++..
T Consensus 383 ~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 383 HTHQCMRMNYVP--EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp GGGGEEEEESCS--CHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEecC--CHHHHHHHHHHHHHHHHHH
Confidence 014799999985 9999999999999988754
No 162
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=5.6e-23 Score=235.52 Aligned_cols=313 Identities=15% Similarity=0.125 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.+++++|.+. .++++ +|+++++..++.++ +++|| .|+++..+|+++...++.
T Consensus 205 g~v~~~ee~la~l~G~d~--~i~~~-~Gtt~a~~~~i~al---------------~~~GD--~Vlv~~~~h~s~~~~~~~ 264 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR--SWSVV-VGTSGSNRTIMQAC---------------MTDND--VVVVDRNCHKSIEQGLML 264 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE--EEEES-SHHHHHHHHHHHHH---------------CCTTC--EEEEESSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCc--eEEEC-CcHHHHHHHHHHHh---------------cCCCC--EEEECCCchHHHHHHHHH
Confidence 456788999999999862 45565 89988888888876 47899 799999999999999999
Q ss_pred cCceEEEEecCCC-----CCC-----CHHHHHHHHhhhc-----cCCCceEEEEecccCccccccCHHHHHHHHHHhCCe
Q 038499 201 SLAEVVEIGLDDD-----GLL-----DIEALRSKLELYK-----DAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGF 265 (609)
Q Consensus 201 ~G~~vv~v~~~~~-----g~l-----d~e~L~~al~~~~-----~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~ 265 (609)
.|+++++++.+.+ |.+ |+++|+++|++.. ...++++++++++ |+||.+.|+++|+++||+||++
T Consensus 265 ~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~ 343 (755)
T 2vyc_A 265 TGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDR 343 (755)
T ss_dssp HCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSE
T ss_pred cCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCE
Confidence 9999999987643 346 9999999997520 1123458889987 7999999999999999999999
Q ss_pred EEEeccccCCcc--cc--cCCCCCCCC--ccE------EEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEe
Q 038499 266 ACFDFAASGPYV--EI--DVRSGQTDG--YDA------IFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNY 333 (609)
Q Consensus 266 vivD~A~~~~~~--~i--d~~~~~~~~--~D~------v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~ 333 (609)
+++|+||+.... +. +..++ .+ +|+ +++|+||+++||.+.|+++++++...++.
T Consensus 344 livDeA~~~~~~~~~~~~~~~~~--~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~------------- 408 (755)
T 2vyc_A 344 LHFDEAWYGYARFNPIYADHYAM--RGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINF------------- 408 (755)
T ss_dssp EEEECTTCTTGGGCGGGTTSSSS--CSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCH-------------
T ss_pred EEEECcCchhcccCcccCCcchh--cCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCH-------------
Confidence 999999875321 11 12221 24 565 99999999999988899999876200110
Q ss_pred ecccccccccccccccccccCCChhHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc---------eE
Q 038499 334 VNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN---------IK 402 (609)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~---------i~ 402 (609)
..+.........++|++..+. .+++.+. ...|.+.+.++..++++++++.|+++++ ++
T Consensus 409 ---------~~~~~~~~~~~s~sp~~~~iaal~aA~~~l--~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~ 477 (755)
T 2vyc_A 409 ---------SRFNQAYMMHATTSPLYAICASNDVAVSMM--DGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFK 477 (755)
T ss_dssp ---------HHHHHHHHHTSCSSCCHHHHHHHHHHHHHH--STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCE
T ss_pred ---------HHHHHHHHHhCCCCHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceee
Confidence 000001133456777766544 3333332 3333456778888999999999988877 88
Q ss_pred EeCCCCCC------C---------------------------------c-------ceEEEEeccCCCCCcCCCCCCCCC
Q 038499 403 ILGNTSTK------R---------------------------------Q-------AILSFNIHSSTINSSLGENTKTET 436 (609)
Q Consensus 403 v~~~~~~~------r---------------------------------~-------~~~~f~~~~~~~~~~~~~~~~~~~ 436 (609)
++++.... + . ..+++.+.+ . +.+
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~--~---------~~~ 546 (755)
T 2vyc_A 478 PWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPG--M---------GED 546 (755)
T ss_dssp ESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSC--B---------CTT
T ss_pred ccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCC--C---------CCC
Confidence 88764210 0 0 122333321 0 112
Q ss_pred C----CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHH
Q 038499 437 D----KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFE 512 (609)
Q Consensus 437 ~----~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid 512 (609)
| .++++..+.+.|.+ +||++... ..+.+|+++++++|+++++
T Consensus 547 G~~~~~g~~~~~l~~~L~~-~gI~~e~~---------------------------------~~~~v~~~~~~g~t~~~~~ 592 (755)
T 2vyc_A 547 GELEETGVPAALVTAWLGR-HGIVPTRT---------------------------------TDFQIMFLFSMGVTRGKWG 592 (755)
T ss_dssp SSBCSSCCCHHHHHHHHHT-TTCCCSEE---------------------------------CSSEEEEECCTTCCTTTTH
T ss_pred CCccccCCcHHHHHHHHHH-CCCEEeec---------------------------------CCCeEEEEECCCCCHHHHH
Confidence 2 24677899999965 89987621 1478999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 038499 513 FTLEALEFIAIYG 525 (609)
Q Consensus 513 ~ll~al~~v~~~~ 525 (609)
+++++|.++.+..
T Consensus 593 ~l~~al~~~~~~~ 605 (755)
T 2vyc_A 593 TLVNTLCSFKRHY 605 (755)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998654
No 163
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.91 E-value=8e-23 Score=224.70 Aligned_cols=322 Identities=14% Similarity=0.049 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHhC-C--CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC--ceEEEECCCCccch
Q 038499 120 TNMVHEASNYIKKCLG-G--GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE--RWVVFVGPHEHHSN 194 (609)
Q Consensus 120 ~~~~~e~r~~ia~~~g-~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~ 194 (609)
..+++.+.+++++..| . +++ +|++| +|+++++..++.++. ++|| +..|+++.+.|+++
T Consensus 132 ~~lr~~ia~~~~~~~gG~~~~~~-~i~~t-~G~~~ai~~~~~~l~---------------~~gd~~~d~Vlv~~p~y~~~ 194 (498)
T 3ihj_A 132 NCIREDVAAYITRRDGGVPADPD-NIYLT-TGASDGISTILKILV---------------SGGGKSRTGVMIPIPQYPLY 194 (498)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCGG-GEEEE-SSHHHHHHHHHHHHC---------------CCCGGGSEEEEEEESCCTHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCcc-cEEEc-CCHHHHHHHHHHHHc---------------CCCCCCCCEEEEeCCCchhH
Confidence 4455555555555553 4 454 89998 889999999988773 5654 23799999999999
Q ss_pred HHHHHHcCceEEEEecCC--CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEe
Q 038499 195 LLSWRQSLAEVVEIGLDD--DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~--~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD 269 (609)
...++..|++++.+++++ ++.+|+++|++++++.....+++++++++++||||.+.+ +++|+++|++||+++|+|
T Consensus 195 ~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~D 274 (498)
T 3ihj_A 195 SAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLAD 274 (498)
T ss_dssp HHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEE
Confidence 999999999999999876 358999999999985321115899999999999999977 566999999999999999
Q ss_pred ccccCCccc-----ccCCCCCC-------CCc-cEEEEcCCCCCCC-C-CCcEEEEE---echhhccCCCCCCccCCCce
Q 038499 270 FAASGPYVE-----IDVRSGQT-------DGY-DAIFLSTHKFLGG-P-GSPGILLM---TKALYQLGSFPPSTCGGGTV 331 (609)
Q Consensus 270 ~A~~~~~~~-----id~~~~~~-------~~~-D~v~~S~hK~lgg-p-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v 331 (609)
++++..... ..+..... ... .+++.|++|.+.| | .+.|++++ ++++ ++.+...
T Consensus 275 e~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l--~~~l~~~------- 345 (498)
T 3ihj_A 275 EVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI--KGQLVKL------- 345 (498)
T ss_dssp CTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH--HHHHHHH-------
T ss_pred cCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH--HHHHHHH-------
Confidence 998753221 11111000 012 2567799999943 2 34799984 5555 2221100
Q ss_pred EeecccccccccccccccccccCCChhHHHHH-HHHHH----------HHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc
Q 038499 332 NYVNGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALA----------FWVKEYIGHEVIKKQEETYIERALERLLPNQN 400 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~----------~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~ 400 (609)
.....+++...+.+ .+++. .+++ ..+.+.++.++.++++.+.|.++|+
T Consensus 346 ------------------~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~l~~~L~~~~g 404 (498)
T 3ihj_A 346 ------------------LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSR---EKESVLGNLAKKAKLTEDLFNQVPG 404 (498)
T ss_dssp ------------------HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH---HHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ------------------HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 01112222233321 11110 0111 1345667788889999999999999
Q ss_pred eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH-HHHHhhhcCcEeccCcccCChhhhhhcCCChhHH
Q 038499 401 IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV-ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQS 479 (609)
Q Consensus 401 i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v-~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~ 479 (609)
+++..+ ..+++.|.....+.... .......++...+ +..|+++.||.+++|..|..+.
T Consensus 405 ~~~~~p----~gg~~~~~~l~~p~~~~-----~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~------------ 463 (498)
T 3ihj_A 405 IHCNPL----QGAMYAFPRIFIPAKAV-----EAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQRE------------ 463 (498)
T ss_dssp EECCCC----CBSSEECCEECCCHHHH-----HHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCT------------
T ss_pred cEecCC----CeEEEEEEeccCchhhh-----HHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCC------------
Confidence 988755 34666654221010000 0000001334443 4444466799999998876321
Q ss_pred HHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 480 YQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 480 ~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++|+++. .++++++.++++|+.+.++.
T Consensus 464 --------------~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 464 --------------GTYHFRMTIL--PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp --------------TCCBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCEEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 1478999995 79999999999999888654
No 164
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=3.7e-23 Score=221.76 Aligned_cols=343 Identities=15% Similarity=0.101 Sum_probs=206.8
Q ss_pred CCChHHHHHHHHHhhcCCc--cCCCCCCchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 87 GRSLRYIENYIINNVLPFY--GNTHTCDSYVGQHTT-NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~--~n~~~~~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.+.++.|.+++.+.+...| ++++.. ++.+.... ...+.+++.+++++|.+.. .+++++|+. ++..++..+
T Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~v~~~~Gs~-a~~~al~~~--- 114 (425)
T 3ecd_A 42 NIVSRAVLDAQGSVLTNKYAEGYPGKR-YYGGCEFADEVEALAIERVKRLFNAGHA--NVQPHSGAQ-ANGAVMLAL--- 114 (425)
T ss_dssp CCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSEE--ECCCSSHHH-HHHHHHHHH---
T ss_pred CCCCHHHHHHHhhhhhcccccCCCcch-hcCCChHHHHHHHHHHHHHHHHhCCCCc--eeecCchHH-HHHHHHHHc---
Confidence 4558889999988775443 233221 22222221 3344466889999998643 345657776 566666655
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHH-HH--HHcCc--eEEEEecCC-CCCCCHHHHHHHHhhhccCCCceEE
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SW--RQSLA--EVVEIGLDD-DGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~--~~~G~--~vv~v~~~~-~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+++|| .|++..++|+++.. .. ...|. +++.++.++ ++.+|+++|++++++ ++++++
T Consensus 115 ------------~~~gd--~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~~v 176 (425)
T 3ecd_A 115 ------------AKPGD--TVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ----HKPSLI 176 (425)
T ss_dssp ------------CCTTC--EEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHH----HCCSEE
T ss_pred ------------cCCCC--EEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh----cCCcEE
Confidence 37888 69999999988332 22 23454 555666653 478999999999975 478999
Q ss_pred EEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhc
Q 038499 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQ 317 (609)
Q Consensus 238 ~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~ 317 (609)
++++++| |...++++|.++|++||+++|+|++|+.+.............+|+++.|+||+++||.+ |+++.+++..
T Consensus 177 ~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-g~~~~~~~~~- 252 (425)
T 3ecd_A 177 IAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRG-GFVLTNDEEI- 252 (425)
T ss_dssp EEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEESCHHH-
T ss_pred EEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCc-EEEEeCCHHH-
Confidence 9988777 57789999999999999999999997654332111111112469999999999988874 9999985431
Q ss_pred cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q 038499 318 LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP 397 (609)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~ 397 (609)
.+.+.+....+ ..++++......++.++......+.+.+.++.+++++++.+.|.+
T Consensus 253 ~~~~~~~~~~~------------------------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (425)
T 3ecd_A 253 AKKINSAVFPG------------------------LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA 308 (425)
T ss_dssp HHHHHHHHC-----------------------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhCcc------------------------ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 11111110000 012333333333332322112234567888888999999999987
Q ss_pred CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChh
Q 038499 398 NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEA 477 (609)
Q Consensus 398 ~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~ 477 (609)
. ++++..+. ....++++.+.+ .. .+...+.+.|.+ .||.++.+.........
T Consensus 309 ~-g~~~~~~~--~~~~~~~~~~~~-~~---------------~~~~~~~~~l~~-~gi~v~~~~~p~~~~~~-------- 360 (425)
T 3ecd_A 309 G-GVDLVTGG--TDNHLLLVDLRP-KG---------------LKGAQVEQALER-AGITCNKNGIPFDPEKP-------- 360 (425)
T ss_dssp T-TCEEGGGS--CSSSEEEEECGG-GT---------------CCHHHHHHHHHH-TTEECEECCCTTCSSCT--------
T ss_pred C-CCeeccCC--CCceEEEEEeCC-CC---------------CCHHHHHHHHHH-cCCEecccccCCCCCCC--------
Confidence 4 78887542 233455555443 11 356788888854 69999955421100000
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEecCCCC----CHHHHHHHHHHHHHHHHhc
Q 038499 478 QSYQIRSAIQKGYVGVKPGWTRISFPYYM----SNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~g~iRls~~~~~----t~eeid~ll~al~~v~~~~ 525 (609)
..++.+|++++.++ +++++++++++|+++++..
T Consensus 361 ---------------~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 361 ---------------TITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp ---------------TTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 02478999965444 4999999999999988764
No 165
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.91 E-value=8.9e-22 Score=212.03 Aligned_cols=341 Identities=11% Similarity=-0.005 Sum_probs=211.3
Q ss_pred eEEecCCCCC------CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTASG------RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~g------~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
..|+|+.++. ..++.|.+++.+.+.....++... + ......++++.++++++.+++ +|+|+ +|+++
T Consensus 43 ~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~-~-----~~~~~~~l~~~la~~~~~~~~-~v~~~-~ggte 114 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGG-I-----THAPAIELCRKLVAMTPQPLE-CVFLA-DSGSV 114 (429)
T ss_dssp CEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSS-E-----ECHHHHHHHHHHHHHSCTTCC-EEEEE-SSHHH
T ss_pred CEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccc-c-----CCHHHHHHHHHHHHhCCCCCC-EEEEe-CCHHH
Confidence 3689986553 357889999988876432221111 1 123456788899999997766 89999 56666
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC-------------ceEEEEecCC-----
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL-------------AEVVEIGLDD----- 212 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G-------------~~vv~v~~~~----- 212 (609)
+++.++.++.. .. . ..-+|++ .|++....||.... .....+ ..++.++.+.
T Consensus 115 a~~~ai~~~~~-~~----~---~~g~~~~--~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (429)
T 1s0a_A 115 AVEVAMKMALQ-YW----Q---AKGEARQ--RFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDG 184 (429)
T ss_dssp HHHHHHHHHHH-HH----H---HHTCCCC--EEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-C
T ss_pred HHHHHHHHHHH-Hh----c---ccCCCCC--eEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccc
Confidence 77777664310 00 0 0002566 46666655554433 322211 1355555532
Q ss_pred -CCCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCCeEEEecccc-CCcccc--cCCC
Q 038499 213 -DGLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVEI--DVRS 283 (609)
Q Consensus 213 -~g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~i--d~~~ 283 (609)
.+.+|+++|++++++. .+++++++++.+ +|+||.+.| +++|.++|++||+++|+|++|+ ++.... .+..
T Consensus 185 ~~~~~d~~~l~~~l~~~--~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~ 262 (429)
T 1s0a_A 185 EWDERDMVGFARLMAAH--RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEH 262 (429)
T ss_dssp CCCGGGGHHHHHHHHHH--TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred cchHHHHHHHHHHHHhC--CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhh
Confidence 2468999999999742 135778777777 899998887 9999999999999999999987 332211 1111
Q ss_pred CCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC--hhHH
Q 038499 284 GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT--PQVI 360 (609)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt--p~i~ 360 (609)
. ....|++++| |+++|+ .++|++++++++ ++.+.+. +.. .....+| .+.+
T Consensus 263 ~-~~~~d~~t~s--K~l~~G~~~iG~~~~~~~~--~~~l~~~---~~~-------------------~~~~~~t~~~n~~ 315 (429)
T 1s0a_A 263 A-EIAPDILCLG--KALTGGTMTLSATLTTREV--AETISNG---EAG-------------------CFMHGPTFMGNPL 315 (429)
T ss_dssp G-TCCCSEEEEC--GGGGTSSSCCEEEEECHHH--HHHHHTS---TTS-------------------SCSCCCTTTTCHH
T ss_pred c-CCCCCEEEec--ccccCCCccceEEEeCHHH--HHHhhcC---CCc-------------------ccccCCCCCCCHH
Confidence 1 1146777554 999876 679999999887 2222111 000 0001122 2333
Q ss_pred HHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 361 QMI--RAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 361 ~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
+.. .+++... +. +.+.++.+++++++.+.|+++ |++....+ ...++++.+.. .
T Consensus 316 ~~~a~~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~----~g~~~~~~~~~-~------------ 373 (429)
T 1s0a_A 316 ACAAANASLAIL--ES---GDWQQQVADIEVQLREQLAPARDAEMVADVRV----LGAIGVVETTH-P------------ 373 (429)
T ss_dssp HHHHHHHHHHHH--HT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEE----ETTEEEEEESS-C------------
T ss_pred HHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE----eeEEEEEEECC-c------------
Confidence 322 3333332 22 245677778888888888764 56543322 22345554432 1
Q ss_pred CCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 038499 436 TDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTL 515 (609)
Q Consensus 436 ~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll 515 (609)
.+...+.+.|.+ .||.+++. .+++||++++.+|++|+++++
T Consensus 374 ----~~~~~l~~~l~~-~Gi~v~~~----------------------------------~~~iRis~~~~~t~e~i~~~~ 414 (429)
T 1s0a_A 374 ----VNMAALQKFFVE-QGVWIRPF----------------------------------GKLIYLMPPYIILPQQLQRLT 414 (429)
T ss_dssp ----BCHHHHHHHHHH-TTEECCCB----------------------------------TTEEEECCCTTCCHHHHHHHH
T ss_pred ----ccHHHHHHHHHH-CCCEEecc----------------------------------CCEEEEECCCCCCHHHHHHHH
Confidence 356778888865 59998731 268999999999999999999
Q ss_pred HHHHHHHHhcc
Q 038499 516 EALEFIAIYGQ 526 (609)
Q Consensus 516 ~al~~v~~~~~ 526 (609)
++|+++++..+
T Consensus 415 ~~l~~~~~~~~ 425 (429)
T 1s0a_A 415 AAVNRAVQDET 425 (429)
T ss_dssp HHHHHHTSSGG
T ss_pred HHHHHHHHhhh
Confidence 99999876544
No 166
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.90 E-value=3.2e-23 Score=225.50 Aligned_cols=307 Identities=14% Similarity=0.129 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH--
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-- 198 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (609)
..++++++++++++|.+ +++++++|++ ++..++. + +++|| .|+++...|+++...|
T Consensus 133 ~~~~~l~~~la~~~g~~---~~i~~~sGt~-al~~~l~-~---------------~~~Gd--~Vi~~~~~y~~~~~~~~~ 190 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD---RAFCFTSGMA-ALSAVTH-L---------------IKNGE--EIVAGDDVYGGSDRLLSQ 190 (464)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEESSHHH-HHHHHHT-T---------------SCTTC--EEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHH-HHHHHHH-H---------------hCCCC--EEEEECCCchhHHHHHHH
Confidence 36888999999999975 4566657865 6776654 2 47888 6889999999887654
Q ss_pred --HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 199 --RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 199 --~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
+..|++++.++.+ |+++|+++++ ++++++++++++||||.+.|+++|+++|++||+++|+|++++.+.
T Consensus 191 ~~~~~G~~v~~v~~~-----d~~~l~~~i~-----~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~ 260 (464)
T 1ibj_A 191 VVPRSGVVVKRVNTT-----KLDEVAAAIG-----PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_dssp TSGGGTCEEEEECTT-----SHHHHHHHCC-----SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTT
T ss_pred HHHHcCCEEEEeCCC-----CHHHHHHHhc-----cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccc
Confidence 4569999999875 8999999997 689999999999999999999999999999999999999998765
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCCCc--EEEEEec-hhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPGSP--GILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g~--G~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
....+. . +.|+++.|+||+++||.|+ |++++++ ++ .+.+.+.. ...
T Consensus 261 ~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l--~~~l~~~~-------------------------~~~ 309 (464)
T 1ibj_A 261 LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGEKL--AKEVYFLQ-------------------------NSE 309 (464)
T ss_dssp TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSHHH--HHHHHHHH-------------------------HHT
T ss_pred cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChHHH--HHHHHHHH-------------------------Hhc
Confidence 421121 2 6899999999999988765 9999986 55 22221110 000
Q ss_pred CCC-hhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHH----------HHhCCCCceEEeCCCCCCCcceEEEEecc
Q 038499 354 GGT-PQVIQMI-RAALAFWVKEYIGHEVIKKQEETYIERAL----------ERLLPNQNIKILGNTSTKRQAILSFNIHS 421 (609)
Q Consensus 354 ~gt-p~i~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~~~----------~~L~~~p~i~v~~~~~~~r~~~~~f~~~~ 421 (609)
.++ ..+.+.+ .+++.-. ...++...+....+.+++. +.|.++|++++..+......++++|.+..
T Consensus 310 g~~~~~~~~~a~~~al~~~---~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~ 386 (464)
T 1ibj_A 310 GSGLAPFDCWLCLRGIKTM---ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_dssp TCBCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred CCCCCHHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence 111 1222211 1111100 0001212222223333333 24455566666655322245677877632
Q ss_pred CCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCc----ccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 422 STINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGC----ACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~----~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
. -....+.+.|. .+||.++.|. .|. |......++..+. ....|+.+++
T Consensus 387 --~---------------~~~~~~~~~L~-~~gi~v~~G~~~sl~~~-p~~~~~~~~~~~~---------~~~~g~~~~~ 438 (464)
T 1ibj_A 387 --V---------------ALSKHLVETTK-YFSIAVSFGSVKSLISM-PCFMSHASIPAEV---------REARGLTEDL 438 (464)
T ss_dssp --H---------------HHHHHHHHHCS-SSEECSCCCSSSCEEEC-TTTTTTCSCCSSS---------SSSSSCCTTC
T ss_pred --H---------------HHHHHHHHhcC-cceEeecCCCCceeeec-ccccccccCCHHH---------HHhcCCCcCe
Confidence 1 01335667664 4799999886 343 2110000000000 0011233689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
+|||++. ||++.+++.|+++++.+
T Consensus 439 iRlsvg~----edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 439 VRISAGI----EDVDDLISDLDIAFKTF 462 (464)
T ss_dssp EEEECCS----SCHHHHHHHHHHHHHSC
T ss_pred EEEEeCC----CCHHHHHHHHHHHHhhc
Confidence 9999985 89999999999988654
No 167
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.90 E-value=7.7e-23 Score=220.00 Aligned_cols=304 Identities=13% Similarity=0.045 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHH--HHHHHHhcccchhhHHHHHHhhhcC---C-------CceEEEECCCC
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAI--KRLQEVMGIAVPSILREKLIKCLRD---E-------ERWVVFVGPHE 190 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal--~~l~~~l~~~~~~~~~~~~~~~l~~---g-------d~~~Vlv~~~~ 190 (609)
..++|+.++++++++++ +|++| +|+++++ ..++..+. ++ | |...|++..+.
T Consensus 78 ~~~lr~~ia~~~~~~~~-~i~~t-~G~~~al~l~~~~~~l~---------------~~~~~g~~~~~~~d~~~Vl~~~p~ 140 (422)
T 3d6k_A 78 IADIRELWAEALGLPAD-LVVAQ-DGSSLNIMFDLISWSYT---------------WGNNDSSRPWSAEEKVKWLCPVPG 140 (422)
T ss_dssp CHHHHHHHHHHHTCCGG-GEEEC-SSCHHHHHHHHHHHHHH---------------HCCTTCSSCGGGSSCCEEEEEESC
T ss_pred CHHHHHHHHHHhCCChh-HEEEe-cchHHHHHHHHHHHHhc---------------CcccccccccccCCCCEEEEeCCc
Confidence 56789999999999877 89998 7777765 66666653 23 2 22268999999
Q ss_pred ccchHHHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEE-EecccCccccccCHH---HHHHHHH-HhCCe
Q 038499 191 HHSNLLSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGS-FSACSNVTGIYSDTR---SIARLLH-QYGGF 265 (609)
Q Consensus 191 h~s~~~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~-~s~~sn~TG~~~dl~---~I~~la~-~~g~~ 265 (609)
|+.+...++..|++++.++++++| +|+++|+++++. .++++++ +++++||||.+.|.+ +|+++|+ +||++
T Consensus 141 y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~ 215 (422)
T 3d6k_A 141 YDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKD----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFR 215 (422)
T ss_dssp CHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTS----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCE
T ss_pred cHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhc----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCE
Confidence 999998899999999999998766 999999999973 3688777 799999999999976 7788888 89999
Q ss_pred EEEeccccC---Cccc---ccCCC----CCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEee
Q 038499 266 ACFDFAASG---PYVE---IDVRS----GQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYV 334 (609)
Q Consensus 266 vivD~A~~~---~~~~---id~~~----~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~ 334 (609)
+|+|++++. .... ..+.. ....+.++++.|++|+ ++| .++|++++++++ ++.+...
T Consensus 216 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l--~~~l~~~---------- 282 (422)
T 3d6k_A 216 IVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKEN--IEWYASH---------- 282 (422)
T ss_dssp EEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHH--HHHHHHH----------
T ss_pred EEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHH--HHHHHHH----------
Confidence 999999863 1110 11100 0112557889999999 445 358999999887 2222110
Q ss_pred cccccccccccccccccccCCChhHHHHHHHHHHHHHHH-h---cCHHHHHHHHHHHHHHHHHHh----CCCCceEEeCC
Q 038499 335 NGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKE-Y---IGHEVIKKQEETYIERALERL----LPNQNIKILGN 406 (609)
Q Consensus 335 ~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~-~---~g~~~i~~~~~~l~~~~~~~L----~~~p~i~v~~~ 406 (609)
......+++.+.+.+ +.+++ .+ . ...+.++++.++.++++.+.| ..++++.+..+
T Consensus 283 --------------~~~~~~~~~~~~q~a--~~~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p 345 (422)
T 3d6k_A 283 --------------ANVRGIGPNKLNQLA--HAQFF-GDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSP 345 (422)
T ss_dssp --------------HHHHCSCCCHHHHHH--HHHHH-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCC
T ss_pred --------------HHhhcCCCCHHHHHH--HHHHH-hCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCC
Confidence 111112333333322 12222 11 0 113334444444555555544 33444676554
Q ss_pred CCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccC-cccCChhhhhhcCCChhHHHHHHHH
Q 038499 407 TSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGG-CACAGPYGHHLLDLDEAQSYQIRSA 485 (609)
Q Consensus 407 ~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G-~~ca~p~~~~ll~i~~~~~~~~~~~ 485 (609)
..+++.+...+ . .+..++.+.|. +.||.+++| ..|... ...
T Consensus 346 ----~~g~~~~~~~~-~----------------~~~~~~~~~l~-~~gV~v~~~g~~f~~~-~~~--------------- 387 (422)
T 3d6k_A 346 ----TGGYFISVDVV-P----------------GTASRVVELAK-EAGIALTGAGSSFPLH-NDP--------------- 387 (422)
T ss_dssp ----SBSSCEEEEES-T----------------TCHHHHHHHHH-HTTEECCCTTTTSGGG-CCT---------------
T ss_pred ----CcceEEEEECC-C----------------CCHHHHHHHHH-HCCeEEEcCccccCCC-CCC---------------
Confidence 23444444333 1 13567777775 469999984 434310 000
Q ss_pred HhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 486 IQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 486 ~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++|||++. ++++++++++++|+++++..
T Consensus 388 --------~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 418 (422)
T 3d6k_A 388 --------NNENIRLAPSL-PPVAELEVAMDGFATCVLMA 418 (422)
T ss_dssp --------TSCEEEECCSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCeEEEecCC-CCHHHHHHHHHHHHHHHHHH
Confidence 14899999987 89999999999999987653
No 168
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.90 E-value=5e-22 Score=213.93 Aligned_cols=324 Identities=19% Similarity=0.146 Sum_probs=198.6
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 116 GQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 116 ~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
++.......++++++++++|.+. .+ ++++|+ +++..++..+ +++|| .|+++...|++..
T Consensus 77 ~r~~~p~~~~le~~lA~l~g~~~--~v-~~~sG~-~Ai~~al~al---------------~~~Gd--~Vi~~~~~y~~~~ 135 (430)
T 3ri6_A 77 SRSSNPTVEDLEQRLKNLTGALG--VL-ALGSGM-AAISTAILTL---------------ARAGD--SVVTTDRLFGHTL 135 (430)
T ss_dssp ---CCHHHHHHHHHHHHHHTCSE--EE-EESCHH-HHHHHHHHHH---------------CCTTC--EEEEETTCCHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHCCCc--EE-EECCHH-HHHHHHHHHH---------------hCCCC--EEEEcCCCchhHH
Confidence 33334567889999999999853 34 445887 6777776665 47898 7999999999888
Q ss_pred HH----HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 196 LS----WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 196 ~~----~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
.. ++..|++++.++.+ |+++|+++++ +++++|++++++||||.+.|+++|+++|++||+++|+|++
T Consensus 136 ~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~-----~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a 205 (430)
T 3ri6_A 136 SLFQKTLPSFGIEVRFVDVM-----DSLAVEHACD-----ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTT 205 (430)
T ss_dssp HHHHTHHHHTTCEEEEECTT-----CHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred HHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 74 45689999999876 8999999998 6899999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCccEEEEcCCCCCCCCC--CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccc-
Q 038499 272 ASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG--SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDI- 348 (609)
Q Consensus 272 ~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~--g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~- 348 (609)
++.+.. .+... .++|+++.|++|++||++ -.|+++.+.+.. .... ..... ....+ ....+....
T Consensus 206 ~~~~~~-~~~~~---~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~-~~~~-~~~~~-----l~~~~--g~~~~i~~~~ 272 (430)
T 3ri6_A 206 MTPPYL-LEAKR---LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFE-WKSL-PSLAP-----YYAKA--GPMAFLYKAR 272 (430)
T ss_dssp TSCTTT-CCGGG---GTCSEEEEECCCEEETTEEECCEEEEECSCSC-GGGS-TTTHH-----HHHHH--GGGHHHHHHH
T ss_pred Cccccc-CChHH---cCCEEEEECCcccccCCCCceEEEEEECChHH-hhhc-cchhh-----hhhhh--chhhHHHHHH
Confidence 987765 22222 278999999999999873 246666543320 0000 00000 00000 000000000
Q ss_pred --cccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC--CC----------Ccc
Q 038499 349 --EERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS--TK----------RQA 413 (609)
Q Consensus 349 --~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~--~~----------r~~ 413 (609)
..+...++.+... +.+... .........++..+++.++.+.|++.|+++ |..|.- .+ ..+
T Consensus 273 ~~~~~~~g~~~~~~~---a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg 347 (430)
T 3ri6_A 273 KEVFQNLGPSLSPHN---AYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAG 347 (430)
T ss_dssp HTHHHHHCCCCCHHH---HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred HHHHHhcCCCCCHHH---HHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCc
Confidence 0011112221111 111111 111233445666778889999999999887 544421 11 145
Q ss_pred -eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCC---h--hhhhhcCCChhHHHHHHHHHh
Q 038499 414 -ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAG---P--YGHHLLDLDEAQSYQIRSAIQ 487 (609)
Q Consensus 414 -~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~---p--~~~~ll~i~~~~~~~~~~~~~ 487 (609)
+++|.+.. . .....+.+.| +.+++.+..|..++- | ..|..+ ..+.
T Consensus 348 ~~lsf~l~~-~----------------~~~~~~~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~--~~~~--------- 398 (430)
T 3ri6_A 348 SILTFELES-K----------------EASYRFMDAL-KLIRRATNIHDNKSLILSPYHVIYALN--SHEE--------- 398 (430)
T ss_dssp SEEEEECSS-H----------------HHHHHHHHHC-SSSEECSCCSCSSCEEECTGGGC-------------------
T ss_pred eEEEEEECC-H----------------HHHHHHHHhC-CcceecCCCCCCCceeeCCcccccccC--CHHH---------
Confidence 88888764 1 1345566666 456777777765541 2 222211 1110
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 488 KGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 488 ~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
.-..|+.+++||||++.- +++.+++.|+..
T Consensus 399 ~~~~g~~~~liRlsvG~E----~~~dl~~dl~~a 428 (430)
T 3ri6_A 399 RLKLEISPAMMRLSVGIE----EIEDLKEDILQA 428 (430)
T ss_dssp -CGGGSCTTEEEEECCSS----CHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEEeccC----CHHHHHHHHHHh
Confidence 001355689999999864 444555555443
No 169
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=7.9e-22 Score=210.03 Aligned_cols=325 Identities=14% Similarity=0.106 Sum_probs=206.2
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|.+++ |..++.+.+++.+.+... .+.... + ......++++.+++++|. ++++|+++ ++++
T Consensus 41 ~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~g~---~~v~~~~g-g~~a 109 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKL-IHCSNL-F-----WNRPQMELAELLSKNTFG---GKVFFANT-GTEA 109 (397)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC-SCCCTT-S-----EEHHHHHHHHHHHHTTTS---CEEEEESS-HHHH
T ss_pred EEEECCccccccccCCCCHHHHHHHHHHHHhc-ccCccc-c-----CCHHHHHHHHHHHHhcCC---CeEEEeCC-HHHH
Confidence 57887543 556788999998877542 222111 1 235678899999999984 37999954 4556
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce------------EEEEecCCCCCCCHHH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE------------VVEIGLDDDGLLDIEA 220 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------vv~v~~~~~g~ld~e~ 220 (609)
+..++.++.... .. -.+|+..+|+..+..|.+....++..|++ ++.++.+ |+++
T Consensus 110 ~~~al~~~~~~~----~~-----~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~ 175 (397)
T 2ord_A 110 NEAAIKIARKYG----KK-----KSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVED 175 (397)
T ss_dssp HHHHHHHHHHHH----HH-----HCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHH
T ss_pred HHHHHHHHHHHh----hc-----CCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHH
Confidence 777666542000 00 01442214444444445555566667765 7777753 8999
Q ss_pred HHHHHhhhccCCCceEEEEecccCcccc-c---cCHHHHHHHHHHhCCeEEEeccccC-Ccc--cccCCCCCCCCccEEE
Q 038499 221 LRSKLELYKDAKRPILGSFSACSNVTGI-Y---SDTRSIARLLHQYGGFACFDFAASG-PYV--EIDVRSGQTDGYDAIF 293 (609)
Q Consensus 221 L~~al~~~~~~~~~~lv~~s~~sn~TG~-~---~dl~~I~~la~~~g~~vivD~A~~~-~~~--~id~~~~~~~~~D~v~ 293 (609)
|+++++ ++++++++++++||||. + .++++|.++|++||+++|+|++++. +.. ...+.... ...|++
T Consensus 176 l~~~l~-----~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d~~- 248 (397)
T 2ord_A 176 LRRKMS-----EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYG-VVPDVL- 248 (397)
T ss_dssp HHHHCC-----TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEE-
T ss_pred HHHHhh-----cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhC-CCCCee-
Confidence 999997 58999999999999999 3 5688999999999999999999872 111 11111111 136876
Q ss_pred EcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH-HHHHHHHHHHHH
Q 038499 294 LSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI-QMIRAALAFWVK 372 (609)
Q Consensus 294 ~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~-~~~~aal~~~~~ 372 (609)
+++|+++++.++|++++++++ + .+.+...+ ...+.+.+. ..+.+++...
T Consensus 249 -s~sK~~~~G~r~G~~~~~~~~--~-~l~~~~~~------------------------~~~~~~~~~~~a~~~~l~~~-- 298 (397)
T 2ord_A 249 -TTAKGLGGGVPIGAVIVNERA--N-VLEPGDHG------------------------TTFGGNPLACRAGVTVIKEL-- 298 (397)
T ss_dssp -EECGGGGTTSCCEEEEECSTT--C-CCCTTSSC------------------------CSSTTCHHHHHHHHHHHHHH--
T ss_pred -eeccccCCCcCeEEEEEchHh--c-ccCCCCcC------------------------CCCCCCHHHHHHHHHHHHHH--
Confidence 447999966679999999887 4 44321000 001112222 2223333322
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 373 EYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
+. +.+.++.+++++++.+.|+++ +.+.... ....++++.+.. . .+...+.+.
T Consensus 299 ~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~~~~~~-~----------------~~~~~l~~~ 354 (397)
T 2ord_A 299 TK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVR----GMGLMIGIQFRE-E----------------VSNREVATK 354 (397)
T ss_dssp TS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE----EETTEEEEEECT-T----------------SCHHHHHHH
T ss_pred Hh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEE----EEeEEEEEEECC-h----------------HHHHHHHHH
Confidence 21 456677777788887777653 3222111 123566665543 1 246788888
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
|.+ .||.+++|. ++++||++++.++++|+++++++|+++++
T Consensus 355 l~~-~gi~v~~~~---------------------------------~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 355 CFE-NKLLVVPAG---------------------------------NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HHH-TTEECEEET---------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHH-CCCEEccCC---------------------------------CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 876 699988541 37899999989999999999999998865
No 170
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.89 E-value=2.8e-22 Score=222.18 Aligned_cols=366 Identities=12% Similarity=0.061 Sum_probs=219.9
Q ss_pred ChHHHHHHHHHhhcC-CccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--C--CCCcEEEeCChHHHHHHHHHHHhccc
Q 038499 89 SLRYIENYIINNVLP-FYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG--G--QEDAMIFCGSGTTAAIKRLQEVMGIA 163 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~-~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~--~--~~~~vift~sGttaal~~l~~~l~~~ 163 (609)
.++.+.+++.+.+.. .|..+. .+..++.+.+.+.+++..+. . +.++|++| +|+++++..++..+...
T Consensus 116 ~~~~~v~a~~~~~~~~~y~~~~-------~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t-~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 116 NRDKVVAEWVNGAVANNYPVPD-------RCLVNTEKIINYFLQELSYKDANLAEQTDLFPT-EGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp CHHHHHHHHHHHHHTCSCCSSS-------SCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEE-EHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHhCCCCCCc-------ccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEE-CCHHHHHHHHHHHhhhh
Confidence 355666666565542 121111 12234455555555444232 2 22389998 89999999988763100
Q ss_pred chhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC----CCCCCCHHHHHHHHhhhccCCCceEEEE
Q 038499 164 VPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD----DDGLLDIEALRSKLELYKDAKRPILGSF 239 (609)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~----~~g~ld~e~L~~al~~~~~~~~~~lv~~ 239 (609)
..+++|| .|+++.++|+++...++..|++++.++++ .++.+|+++|+++++ ++++++++
T Consensus 188 ----------~l~~~gd--~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-----~~~k~v~l 250 (533)
T 3f6t_A 188 ----------HLLKKGD--KIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-----PSIKALIV 250 (533)
T ss_dssp ----------TSSCTTC--EEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-----TTEEEEEE
T ss_pred ----------hccCCcC--EEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-----CCCeEEEE
Confidence 0147888 79999999999888888889999999885 357889999999987 68999999
Q ss_pred ecccCccccccCHH---HHHHHHH-HhCCeEEEeccccCCcc-cccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEec
Q 038499 240 SACSNVTGIYSDTR---SIARLLH-QYGGFACFDFAASGPYV-EIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMTK 313 (609)
Q Consensus 240 s~~sn~TG~~~dl~---~I~~la~-~~g~~vivD~A~~~~~~-~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~~ 313 (609)
++++||||.+.+.+ +|+++|+ +||+++|+|++++.... ...+... ..+.++++.|+||.+|.|+ .+|++++++
T Consensus 251 ~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 329 (533)
T 3f6t_A 251 VNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNE 329 (533)
T ss_dssp ESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEES
T ss_pred eCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECc
Confidence 99999999998876 7888888 68999999999763221 1111111 1245689999999998332 389999998
Q ss_pred h-----hhccCCCCCCccCCCceEeec-cccccccccc-------ccccccccCCChhHHHHHHH--HHHHHHH------
Q 038499 314 A-----LYQLGSFPPSTCGGGTVNYVN-GFNEKDTLYL-------EDIEERESGGTPQVIQMIRA--ALAFWVK------ 372 (609)
Q Consensus 314 ~-----~~~l~~~~p~~~ggg~v~~~~-~~~~~~~~~~-------~~~~~r~~~gtp~i~~~~~a--al~~~~~------ 372 (609)
+ + +..+++.....-...|.+ ...+....+. .........+++...+.+.+ ++..+..
T Consensus 330 ~~~~~~l--i~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~ 407 (533)
T 3f6t_A 330 KNVFDDN--IAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGS 407 (533)
T ss_dssp SCHHHHH--HHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGT
T ss_pred HHHHHHH--HHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccc
Confidence 7 4 223211000000000000 0000000000 00111122333334443322 2222210
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC--------CCChHH
Q 038499 373 EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK--------PLHGPF 444 (609)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~--------~l~~~~ 444 (609)
.....+.++++.++.++++.+.|. + ++.+.. +..+++.+.-.+ .... ...+. ..+..+
T Consensus 408 ~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~----~~~g~~~~~~l~-~~~~-------~~~g~~~~~~~~~~~~~~~ 473 (533)
T 3f6t_A 408 DDPYIDIARKLVSERYDQLHDAMQ-A-PKDETD----TNTHYYSLIDIY-RLAE-------KIYGKEFRDYLTNNFEQVD 473 (533)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCST----TBCCSEEEEEHH-HHHH-------HHHCHHHHHHHHHHCCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-C-CccccC----CCceEEEEEehH-hhhh-------hccchHHHHHhhccCCHHH
Confidence 112345677788888889999996 5 444333 244555554332 1000 00000 013446
Q ss_pred HHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 445 VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 445 v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++..|.++.||.+.+|..|..+ ++++|||+.. .++++++.++++|.+++++
T Consensus 474 ~~~~ll~~~GV~v~pg~~f~~~----------------------------~~~iRls~a~-~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 474 FLLKLAEKNGVVLVDGVGFGAK----------------------------PGELRVSQAN-LPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp HHHHHHHHTTSSSCTTEEECSS----------------------------TTEEEEESSS-SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCcccCCC----------------------------CCEEEEEEee-CCHHHHHHHHHHHHHHHHH
Confidence 6666666789999999888732 4899999964 5799999999999998876
Q ss_pred c
Q 038499 525 G 525 (609)
Q Consensus 525 ~ 525 (609)
.
T Consensus 525 ~ 525 (533)
T 3f6t_A 525 Y 525 (533)
T ss_dssp H
T ss_pred H
Confidence 4
No 171
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.89 E-value=7.1e-23 Score=222.94 Aligned_cols=362 Identities=14% Similarity=0.091 Sum_probs=211.5
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
..|+|+.+..+. +.|.+++.+.+.. +. . .+.. .....++++++++++|. ++|+||++| ++++..++
T Consensus 43 ~~ylD~~~~~~~-~~v~~a~~~~~~~--~~--~-~y~~----~~~~~~l~~~la~~~~~---~~v~~t~gg-t~A~~~al 108 (467)
T 1ax4_A 43 AVYIDLLTDSGT-NAMSDHQWAAMIT--GD--E-AYAG----SRNYYDLKDKAKELFNY---DYIIPAHQG-RGAENILF 108 (467)
T ss_dssp GCSEECSCSSSC-CCEEHHHHHHHHT--CC--C-CSSS----CHHHHHHHHHHHHHHCC---CEEEEESSH-HHHHHHHH
T ss_pred ceeeecccCcCC-HHHHHHHHHHHhh--cc--c-cccc----CccHHHHHHHHHHHcCC---CcEEEcCCc-HHHHHHHH
Confidence 359999876655 5555655555431 11 1 1111 12356789999999987 379999555 55677776
Q ss_pred HHhcccchhhHHHHHHhhhc----CCCc-eEEEECCCCccchHHHHHHcCceEEEEecC----------CCCCCCHHHHH
Q 038499 158 EVMGIAVPSILREKLIKCLR----DEER-WVVFVGPHEHHSNLLSWRQSLAEVVEIGLD----------DDGLLDIEALR 222 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~----~gd~-~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~----------~~g~ld~e~L~ 222 (609)
.++. . +||. ..|+++.+.|.++...+...|++++.++.. .++.+|+++|+
T Consensus 109 ~~~~---------------~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 173 (467)
T 1ax4_A 109 PVLL---------------KYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLK 173 (467)
T ss_dssp HHHH---------------HHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHH
T ss_pred HHHH---------------HhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHH
Confidence 6652 3 7872 116776333345566777889998877542 14578999999
Q ss_pred HHHhhhccCCCceEEEEecccCcc-ccccC---HHHHHHHHHHhCCeEEEeccccC-----------CcccccCCCCC--
Q 038499 223 SKLELYKDAKRPILGSFSACSNVT-GIYSD---TRSIARLLHQYGGFACFDFAASG-----------PYVEIDVRSGQ-- 285 (609)
Q Consensus 223 ~al~~~~~~~~~~lv~~s~~sn~T-G~~~d---l~~I~~la~~~g~~vivD~A~~~-----------~~~~id~~~~~-- 285 (609)
++|++.. .+++++|++++++|+| |.+.+ +++|+++|++||+++|+|++++. ++..+++..+.
T Consensus 174 ~~i~~~~-~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (467)
T 1ax4_A 174 ENIAQHG-ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFD 252 (467)
T ss_dssp HHHHHHC-GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHH
T ss_pred HHHHhcC-CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhh
Confidence 9998421 1268999999999999 88765 57899999999999999998654 23222221110
Q ss_pred -CCCccEEEEcCCCCCCCCCCcEEEEEe-c-hhhccCCCCCCcc--CCCceEeecccccccccccccccccccCCChhHH
Q 038499 286 -TDGYDAIFLSTHKFLGGPGSPGILLMT-K-ALYQLGSFPPSTC--GGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI 360 (609)
Q Consensus 286 -~~~~D~v~~S~hK~lggp~g~G~L~~~-~-~~~~l~~~~p~~~--ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~ 360 (609)
...+|++++|+||++|.|.| |+++.+ + ++. +.+..... ++. ...++.+..
T Consensus 253 ~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~--~~~~~~~~~~~~~----------------------~~~~~~~~~ 307 (467)
T 1ax4_A 253 MYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIF--TLARQRCVPMEGF----------------------VTYGGLAGR 307 (467)
T ss_dssp HGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHH--HHHHHHHHHHTCS----------------------TTTTTCCHH
T ss_pred hccccceEEEeccccCCCCcc-eEEEeCCHHHHH--HHHHhhccccccc----------------------cccCCccch
Confidence 01468999999999987645 777777 5 552 22111100 110 012222322
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCC
Q 038499 361 QMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPL 440 (609)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 440 (609)
.....+..+ ......+.+ ++..++++++.+.|.+ +++.+..+. +...+++.+.. -. .+......
T Consensus 308 ~~~a~~~~l--~~~~~~~~~-~~~~~~~~~l~~~L~~-~~~~~~~~~---~~~~~~~~~~~-~~--------~~~~~~~~ 371 (467)
T 1ax4_A 308 DMAAMVQGL--EEGTEEEYL-HYRIGQVKYLGDRLRE-AGIPIQYPT---GGHAVFVDCKK-LV--------PQIPGDQF 371 (467)
T ss_dssp HHHHHHHHH--HHTTCHHHH-HHHHHHHHHHHHHHHH-TTCCBCSSC---CSSEEEEESTT-TC--------TTSCGGGC
T ss_pred HHHHHHHHH--HHhhhhhHH-HHHHHHHHHHHHHHHh-CCCCcccCC---CceEEEEehhh-hc--------cccccCCC
Confidence 222111111 122221222 3334566778888866 467665442 33444444110 00 00000013
Q ss_pred ChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC-CCCHHHHHHHHHHH
Q 038499 441 HGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY-YMSNEEFEFTLEAL 518 (609)
Q Consensus 441 ~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~-~~t~eeid~ll~al 518 (609)
+...+++.|.++.||.+++ |..|.+.... .+.+. -...+++||+++. .+|++|+++++++|
T Consensus 372 ~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~--~g~~~---------------~~~~~~iRls~~~~~~t~e~i~~~~~~l 434 (467)
T 1ax4_A 372 PAQAVINALYLESGVRAVEIGSFLLGRDPA--TGEQK---------------HADMEFMRLTIARRVYTNDHMDYIADAL 434 (467)
T ss_dssp HHHHHHHHHHHHHCEECEEESHHHHCBCTT--TCSBC---------------CCSCCEEEEECCTTSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCceeeecCccccccccc--ccccc---------------ccccceEEEecccccCCHHHHHHHHHHH
Confidence 4567888884456999987 5443211000 00000 0013799999984 48999999999999
Q ss_pred HHHHHhccc
Q 038499 519 EFIAIYGQR 527 (609)
Q Consensus 519 ~~v~~~~~~ 527 (609)
+++++....
T Consensus 435 ~~~~~~~~~ 443 (467)
T 1ax4_A 435 IGLKEKFAT 443 (467)
T ss_dssp HTTHHHHTT
T ss_pred HHHHHhhhc
Confidence 998877543
No 172
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.89 E-value=7.7e-22 Score=211.59 Aligned_cols=333 Identities=11% Similarity=-0.028 Sum_probs=210.3
Q ss_pred EecCCCCCCChHHHHHHHHHhhcC-CccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCCCCCcEEEeCChHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLP-FYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~-~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~~~~~vift~sGttaal~ 154 (609)
|+|+....+.++.+.+++.+.... ... |....+ ..++++.+++++ +.+..++|++| +|+++++.
T Consensus 48 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~------y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~i~~t-~g~~~al~ 116 (418)
T 3rq1_A 48 IHDEEGNLVFLKTVKEEYLSLSDSEHVG------YAPIAG----IPDFLCAAEKECFGNFRPEGHIRSIAT-AGGTGGIH 116 (418)
T ss_dssp CBCTTSCBCCCHHHHHHHHTCCHHHHHS------CCCTTC----CHHHHHHHHHHHHGGGCCSSEEEEEEE-SHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHhcccccCC------CCCCCC----hHHHHHHHHHHHhcccCccccccEEEC-CchHHHHH
Confidence 344445567778888887553321 101 111111 334556666654 33222278888 78888999
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-CCCCCCHHHHHHHHhhhccCCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKR 233 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~ 233 (609)
.++..+ +++|| .|+++.+.|+++...++..|++++.++++ +++.+|+++|++++++... ++
T Consensus 117 ~~~~~l---------------~~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~-~~ 178 (418)
T 3rq1_A 117 HLIHNY---------------TEPGD--EVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA-KQ 178 (418)
T ss_dssp HHHHHH---------------SCTTC--EEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH-HC
T ss_pred HHHHHh---------------cCCCC--EEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc-cC
Confidence 888876 47888 69999999999998899999999999985 4568999999999974110 15
Q ss_pred ce-EEEEecc-cCccccccCHHHH---HHHHH------HhCCeEEEeccccCCc-cc---ccC-CCCCCCCcc---EEEE
Q 038499 234 PI-LGSFSAC-SNVTGIYSDTRSI---ARLLH------QYGGFACFDFAASGPY-VE---IDV-RSGQTDGYD---AIFL 294 (609)
Q Consensus 234 ~~-lv~~s~~-sn~TG~~~dl~~I---~~la~------~~g~~vivD~A~~~~~-~~---id~-~~~~~~~~D---~v~~ 294 (609)
++ +++++++ +||||.+.|.+++ +++|+ +||+++|+|+++.... .. ..+ ........| +++.
T Consensus 179 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 258 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCY 258 (418)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEE
Confidence 66 8889999 9999999996654 55565 8999999999974321 10 011 100000123 7778
Q ss_pred cCCCCCCCCC-CcEEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 295 STHKFLGGPG-SPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 295 S~hK~lggp~-g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
|+||.+|.|+ ++|++++ ++++ ++.+..... + ..+....+++..+... +..++
T Consensus 259 S~sK~~~~~G~r~G~~~~~~~~~~~--~~~~~~~~~-----------------~----~~~~~~~~~~~~~~~a-~~~~l 314 (418)
T 3rq1_A 259 SLSKGFTMYGQRVGAMIGISDDEEI--ADEFFEVNK-----------------S----TSRATWSNICRPAMRT-MANIV 314 (418)
T ss_dssp ESTTTTTCCSSCCEEEEEEESSHHH--HHHHHHHHH-----------------H----HHHHHTSSCCHHHHHH-HHHHH
T ss_pred eCCCCCcCcCCcceEEEEEeCCHHH--HHHHHHHHH-----------------H----HHhhccCCCchHHHHH-HHHHh
Confidence 9999998553 5899998 7776 222211000 0 0000011222222211 11111
Q ss_pred HHHh-------cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChH
Q 038499 371 VKEY-------IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGP 443 (609)
Q Consensus 371 ~~~~-------~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 443 (609)
.+. ...+.+.++.++.++++.+.|+++ ++++..+ ..+++.|.-.. +..
T Consensus 315 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~-------------------~~~ 369 (418)
T 3rq1_A 315 -ADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPY----RGGFFITIPTD-------------------SAN 369 (418)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCC----CSSSEEEEECT-------------------THH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCC----CceEEEEcCCC-------------------CHH
Confidence 110 012355667777788888888776 6666544 33555544322 467
Q ss_pred HHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 444 FVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 444 ~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.+++.|. ++||.+++| ++++|||++ ..++++++.++++|+++++
T Consensus 370 ~~~~~l~-~~gi~v~~g----------------------------------~~~iRis~~-~~~~~~i~~~~~~l~~~l~ 413 (418)
T 3rq1_A 370 AICEELK-KEHIYVIAL----------------------------------ANGIRIAAC-GIPKCQMTGLAEKIYNAMK 413 (418)
T ss_dssp HHHHHHH-HTTEECEEC----------------------------------SSEEEEEGG-GSCHHHHTTHHHHHHHHHH
T ss_pred HHHHHHH-hCCEEEecC----------------------------------CCCeEEEEe-cCCHHHHHHHHHHHHHHHH
Confidence 8888885 469999854 268999987 5699999999999999987
Q ss_pred hcc
Q 038499 524 YGQ 526 (609)
Q Consensus 524 ~~~ 526 (609)
+..
T Consensus 414 ~~~ 416 (418)
T 3rq1_A 414 SLG 416 (418)
T ss_dssp HTT
T ss_pred HHh
Confidence 654
No 173
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.89 E-value=2.8e-22 Score=212.37 Aligned_cols=185 Identities=18% Similarity=0.119 Sum_probs=134.4
Q ss_pred EEecCCCC---CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 038499 79 TYADHTAS---GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 79 vyld~~a~---g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~ 155 (609)
+| |++.. .+.++.|.+++. .+.++ ....+++++.+++++|+++.++++++ +|+++++..
T Consensus 30 v~-~~~~~~~~~~~~~~v~~a~~-----~~~~~-----------~~~~~~~~~~~a~~~g~~~~~~~~~~-~ggt~a~~~ 91 (374)
T 2aeu_A 30 LY-DLSGLSGGFLIDEKDKALLN-----TYIGS-----------SYFAEKVNEYGLKHLGGDENDKCVGF-NRTSSAILA 91 (374)
T ss_dssp CE-ECSSCCCCCCCCHHHHHHHT-----STTHH-----------HHHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHHHH
T ss_pred ee-eecccCCCCCCCHHHHHHHH-----HhcCc-----------hHHHHHHHHHHHHHhCCCCcceEEEE-cChHHHHHH
Confidence 55 66643 467777777774 11111 22345677778899998532378888 455567777
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH---HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCC
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL---SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~---~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~ 232 (609)
++.. + +|| .|+++.++|++... .++..|++++.+ .|+++|+++ + +
T Consensus 92 ~~~~----------------~-~gd--~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-----~ 139 (374)
T 2aeu_A 92 TILA----------------L-KPK--KVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-----D 139 (374)
T ss_dssp HHHH----------------H-CCS--EEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-----C
T ss_pred HHHh----------------C-CCC--EEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-----C
Confidence 6653 4 677 68888887766443 456779999888 288999887 4 6
Q ss_pred CceE-EEEecccCccc-cccCHHHHHHHHHHhCCeEEEeccccCCcc-cccCC-CCCCCCccEEEEcCCCCCCCCCCcEE
Q 038499 233 RPIL-GSFSACSNVTG-IYSDTRSIARLLHQYGGFACFDFAASGPYV-EIDVR-SGQTDGYDAIFLSTHKFLGGPGSPGI 308 (609)
Q Consensus 233 ~~~l-v~~s~~sn~TG-~~~dl~~I~~la~~~g~~vivD~A~~~~~~-~id~~-~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (609)
++++ +++++++|||| ...|+++|.++|++||+++|+|++++.... +.... .. ..+.|+++.|+||+++|+ +.|+
T Consensus 140 ~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~di~~~S~sK~l~g~-~~G~ 217 (374)
T 2aeu_A 140 KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KLGADLVVTSTDKLMEGP-RGGL 217 (374)
T ss_dssp TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HHTCSEEEEETTSSSSSC-SCEE
T ss_pred CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-ccCCcEEEecCcccccCc-ceEE
Confidence 8999 99999999999 889999999999999999999999765431 11000 11 015699999999999887 5799
Q ss_pred EEEechh
Q 038499 309 LLMTKAL 315 (609)
Q Consensus 309 L~~~~~~ 315 (609)
+++++++
T Consensus 218 ~~~~~~~ 224 (374)
T 2aeu_A 218 LAGKKEL 224 (374)
T ss_dssp EEEEHHH
T ss_pred EEECHHH
Confidence 9999887
No 174
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.89 E-value=1.4e-22 Score=215.95 Aligned_cols=330 Identities=14% Similarity=0.112 Sum_probs=209.4
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC------CCCcEEE--eCChHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG------QEDAMIF--CGSGTT 150 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~------~~~~vif--t~sGtt 150 (609)
+|+|+.+..+..+.+.+++.+.... ..+.+.. ...| ..++|+.++++++.. ++ +|++ | +|++
T Consensus 37 ~~~d~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~-~~~g------~~~lr~~ia~~~~~~~~~~~~~~-~i~~v~t-~G~~ 106 (401)
T 7aat_A 37 AYRDDNGKPYVLNCVRKAEAMIAAK-KMDKEYL-PIAG------LADFTRASAELALGENSEAFKSG-RYVTVQG-ISGT 106 (401)
T ss_dssp SCCCTTSCCCCCHHHHHHHHHHHHT-TCCCCCC-CTTC------CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-EHHH
T ss_pred eEECCCCCEechHHHHHHHHHhccc-ccccCCC-CCCC------CHHHHHHHHHHhcCCCccccccC-ceEEEec-Ccch
Confidence 4778887777777888887765532 1122111 1112 456777788777643 55 7876 7 7888
Q ss_pred HHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CCCCCCHHHHHHHHhhh
Q 038499 151 AAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DDGLLDIEALRSKLELY 228 (609)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~ 228 (609)
++++.++.++. ..+++|| .|+++.+.|+.+...++..|++++.++++ .++.+|++++++.+.+
T Consensus 107 ~al~~~~~~l~------------~~~~~gd--~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~- 171 (401)
T 7aat_A 107 GSLRVGANFLQ------------RFFKFSR--DVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISK- 171 (401)
T ss_dssp HHHHHHHHHHH------------HHCTTCC--EEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT-
T ss_pred HHHHHHHHHHH------------HhccCCC--EEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHh-
Confidence 88988776542 0136788 69999999999999999999999999975 3678999999888874
Q ss_pred ccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCc-ccc--c---CCCC-CCCCccEEEEcCCC
Q 038499 229 KDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY-VEI--D---VRSG-QTDGYDAIFLSTHK 298 (609)
Q Consensus 229 ~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~-~~i--d---~~~~-~~~~~D~v~~S~hK 298 (609)
..++++++++++++||||.+.+ +++|+++|++||+++++|+++.... ... + +... ......+++.|+||
T Consensus 172 -~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 250 (401)
T 7aat_A 172 -IPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK 250 (401)
T ss_dssp -SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred -CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCc
Confidence 1257899999999999998876 6788999999999999999966432 111 1 1000 11245688899999
Q ss_pred CCCCCC-CcEEEEEe---chhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH--
Q 038499 299 FLGGPG-SPGILLMT---KALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW-- 370 (609)
Q Consensus 299 ~lggp~-g~G~L~~~---~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~-- 370 (609)
.+|.|+ ++|++++. ++... ...+. ........+.+.+.+.+ ++..+.
T Consensus 251 ~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~-~~~~l~~~ 305 (401)
T 7aat_A 251 NMGLYGERAGAFTVICRDAEEAKRVESQLK------------------------ILIRPMYSNPPMNGARI-ASLILNTP 305 (401)
T ss_dssp TSCCGGGCEEEEEEECSSHHHHHHHHHHHH------------------------HHHHHHHSSCCHHHHHH-HHHHHHCH
T ss_pred ccccccCceEEEEEEeCCHHHHHHHHHHHH------------------------HHHHhccCCCChHHHHH-HHHHhCCH
Confidence 998442 38999873 33100 00000 00001112223222221 111110
Q ss_pred -HHH--hcCHHHHHHHHHHHHHHHHHHhCCC---CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHH
Q 038499 371 -VKE--YIGHEVIKKQEETYIERALERLLPN---QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPF 444 (609)
Q Consensus 371 -~~~--~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 444 (609)
+.+ ....+.++++.+++++++.+.|+++ +++.+..+ ..+++.|. . ++.+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~--~------------------~~~~~ 361 (401)
T 7aat_A 306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITD----QIGMFCFT--G------------------LKPEQ 361 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH----CCSSEEEC--C------------------CCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecC----CcceEEec--C------------------CCHHH
Confidence 000 1124566778888888999988765 23444333 23444443 2 34455
Q ss_pred HHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 445 VATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 445 v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
+ ..|.+++||.+.+ .+|+|++..+++ |+++++++|++++
T Consensus 362 ~-~~ll~~~gi~v~~-------------------------------------~~Ris~~~~~~~-~i~~~~~~l~~~~ 400 (401)
T 7aat_A 362 V-ERLTKEFSIYMTK-------------------------------------DGRISVAGVASS-NVGYLAHAIHQVT 400 (401)
T ss_dssp H-HHHHHHHCEECCT-------------------------------------TCEEEGGGCCTT-THHHHHHHHHHHH
T ss_pred H-HHHHHhCCEeccC-------------------------------------CCeEEeccCChh-hHHHHHHHHHHHh
Confidence 5 4444567998862 259999865554 5999999999875
No 175
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=7.9e-21 Score=204.05 Aligned_cols=342 Identities=11% Similarity=0.050 Sum_probs=206.4
Q ss_pred EEecCCC------CCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTA------SGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a------~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..+ .|..++.|.+++.+.+... .+... .+.......++++.|+++++.+..++|+|| +|++++
T Consensus 42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~-~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~~~v~~~-~g~~~a 114 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKL-SHTCF-----QVLAYEPYLELCEIMNQKVPGDFAKKTLLV-TTGSEA 114 (426)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTC-SCCCT-----TTEECHHHHHHHHHHHHHSSCSSCEEEEEE-SSHHHH
T ss_pred EEEEcccChhhcccCCCCHHHHHHHHHHHHhC-CCccc-----cccCCHHHHHHHHHHHHhCCcccccEEEEe-CchHHH
Confidence 4777652 3456788999998887542 22111 112234577899999999943331489998 666777
Q ss_pred HHHHHH---HhcccchhhHHHHHHhhhcCCCceEEEECCCCcc-chHHHHHHcCce-------------EEEEecCC---
Q 038499 153 IKRLQE---VMGIAVPSILREKLIKCLRDEERWVVFVGPHEHH-SNLLSWRQSLAE-------------VVEIGLDD--- 212 (609)
Q Consensus 153 l~~l~~---~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~-s~~~~~~~~G~~-------------vv~v~~~~--- 212 (609)
+..++. .+ .+++ .|++....|| .....+...|.+ ++.++.+.
T Consensus 115 ~~~~~~~a~~~---------------~~~~---~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~ 176 (426)
T 1sff_A 115 VENAVKIARAA---------------TKRS---GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH 176 (426)
T ss_dssp HHHHHHHHHHH---------------HTCC---EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGG
T ss_pred HHHHHHHHHHh---------------hCCC---eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCcccc
Confidence 887766 22 2444 2555545554 444455555543 77787753
Q ss_pred --CCCCCHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc--ccCC
Q 038499 213 --DGLLDIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE--IDVR 282 (609)
Q Consensus 213 --~g~ld~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~--id~~ 282 (609)
++.+|+++|++++++....+++++++++. ++| ||.+.+ +++|.++|++||+++|+|++++. +... ..+.
T Consensus 177 ~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 255 (426)
T 1sff_A 177 GISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAME 255 (426)
T ss_dssp TBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGG
T ss_pred ccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhh
Confidence 23478999999997311113577777754 455 998777 99999999999999999999883 2211 1111
Q ss_pred CCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH-
Q 038499 283 SGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ- 361 (609)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~- 361 (609)
.. ...+|++ |++|++|+...+|++++++++ ++.+.+...+ ...+.+.+.+
T Consensus 256 ~~-~~~~di~--s~sK~~~~GlriG~~~~~~~~--~~~l~~~~~~------------------------~~~~~~~~~~~ 306 (426)
T 1sff_A 256 QM-GVAPDLT--TFAKSIAGGFPLAGVTGRAEV--MDAVAPGGLG------------------------GTYAGNPIACV 306 (426)
T ss_dssp GT-TSCCSEE--EECGGGGTSSCCEEEEEEHHH--HTTSCTTSBC------------------------CSSSSCHHHHH
T ss_pred hc-CCCCCEE--EEcccccCCCceEEEEEcHHH--HhhhccCCcC------------------------cCCCCCHHHHH
Confidence 11 0135766 667999853347999999988 4444321100 0111222222
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 362 MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
.+.+++.+. +. +.+.++.+++++++.++|.+ ++.+....+ ...++++.+.. ... ....
T Consensus 307 a~~aal~~~--~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~--------~~~~ 368 (426)
T 1sff_A 307 AALEVLKVF--EQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG----LGAMIAIELFE-DGD--------HNKP 368 (426)
T ss_dssp HHHHHHHHH--HH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE----ETTEEEEEEBG-GGC--------TTSB
T ss_pred HHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE----EEEEEEEEEec-Ccc--------ccCC
Confidence 223444443 22 13455666667777766654 444333222 23555555532 000 0000
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
...+...+.+.|.+ .||.+++|..+ ++++||++++.++++|+++++++
T Consensus 369 ~~~~~~~l~~~l~~-~gi~v~~~~~~-------------------------------~~~iRi~~~~~~~~~~i~~~~~~ 416 (426)
T 1sff_A 369 DAKLTAEIVARARD-KGLILLSCGPY-------------------------------YNVLRILVPLTIEDAQIRQGLEI 416 (426)
T ss_dssp CHHHHHHHHHHHHH-TTEECEEESTT-------------------------------SCEEEECCCTTCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH-CCcEEecCCCC-------------------------------CCEEEEECCccCCHHHHHHHHHH
Confidence 01235678888866 59999865421 37999999999999999999999
Q ss_pred HHHHHHhc
Q 038499 518 LEFIAIYG 525 (609)
Q Consensus 518 l~~v~~~~ 525 (609)
|+++++..
T Consensus 417 l~~~l~~~ 424 (426)
T 1sff_A 417 ISQCFDEA 424 (426)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 176
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.89 E-value=2.9e-21 Score=205.92 Aligned_cols=331 Identities=12% Similarity=0.069 Sum_probs=206.7
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|+.++ |..++.+.+++.+.+......... + ......++++++++++|.+ +++|+ +|++++
T Consensus 40 ~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~la~~~~~~---~v~~~-~gg~~a 108 (406)
T 4adb_A 40 EYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNG--Y-----TNEPVLRLAKKLIDATFAD---RVFFC-NSGAEA 108 (406)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTT--S-----CCHHHHHHHHHHHHHSSCS---EEEEE-SSHHHH
T ss_pred EEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCC--c-----CCHHHHHHHHHHHhhCCCC---eEEEe-CcHHHH
Confidence 48888765 334788999998888654322211 1 1245778999999999864 78998 555667
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHcC-------------ceEEEEecCCCCCCCH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQSL-------------AEVVEIGLDDDGLLDI 218 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv~v~~~~~g~ld~ 218 (609)
+..++.++... ....-.+| + .|++....||.....+...+ .++..++. .|+
T Consensus 109 ~~~al~~~~~~--------~~~~~~~g~~--~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~ 173 (406)
T 4adb_A 109 NEAALKLARKF--------AHDRYGSHKS--GIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDI 173 (406)
T ss_dssp HHHHHHHHHHH--------HHHHTCTTCC--EEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCH
T ss_pred HHHHHHHHHHH--------HHhcCCCCCc--EEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcH
Confidence 77776654200 00000145 5 46666666666544444333 24555554 389
Q ss_pred HHHHHHHhhhccCCCceEEEEecccCcccccc-----CHHHHHHHHHHhCCeEEEeccccC-Cccc--ccCCCCCCCCcc
Q 038499 219 EALRSKLELYKDAKRPILGSFSACSNVTGIYS-----DTRSIARLLHQYGGFACFDFAASG-PYVE--IDVRSGQTDGYD 290 (609)
Q Consensus 219 e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~-----dl~~I~~la~~~g~~vivD~A~~~-~~~~--id~~~~~~~~~D 290 (609)
++|+++++ +++++++++ ++|+||.+. ++++|.++|++||+++|+|++++. +... +.+... ....|
T Consensus 174 ~~l~~~l~-----~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~d 246 (406)
T 4adb_A 174 NSASALID-----DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHY-GVTPD 246 (406)
T ss_dssp HHHHTTCS-----TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHH-TCCCS
T ss_pred HHHHHHhc-----CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhc-CCCCC
Confidence 99999987 689999999 899998765 588999999999999999999862 2211 111111 01457
Q ss_pred EEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHH-HHHHHHHH
Q 038499 291 AIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQ-MIRAALAF 369 (609)
Q Consensus 291 ~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~-~~~aal~~ 369 (609)
++++ ||++++..++|++++++++ ++.+.+...++. .+.+.+.+ ...+++..
T Consensus 247 ~~t~--sK~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~------------------------~~~~~~~~~a~~~~l~~ 298 (406)
T 4adb_A 247 LLTT--AKALGGGFPVGALLATEEC--ARVMTVGTHGTT------------------------YGGNPLASAVAGKVLEL 298 (406)
T ss_dssp EEEE--CGGGGTTSCCEEEEECHHH--HHTCCTTSSCCS------------------------STTCHHHHHHHHHHHHH
T ss_pred EEEe--chhhcCCCCeEEEEEcHHH--HhhhccCCcCCC------------------------CCCCHHHHHHHHHHHHH
Confidence 7754 8999854468999999988 444433311110 11122222 12222222
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc-eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 370 WVKEYIGHEVIKKQEETYIERALERLLPNQN-IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
. ..+.+.++.+++++++.+.|+++.. +.+.... .....++++.+.. .. ..+...+.+.
T Consensus 299 ~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~-~~--------------~~~~~~~~~~ 357 (406)
T 4adb_A 299 I-----NTPEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNA-DY--------------AGQAKQISQE 357 (406)
T ss_dssp H-----SSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECT-TT--------------TTCHHHHHHH
T ss_pred H-----HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeC-Cc--------------HHHHHHHHHH
Confidence 1 2266777888888888888765411 1111100 0123455555543 11 0246788888
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
|.++ ||.++++. ++++|+++++.+|++|+++++++|+++++..
T Consensus 358 l~~~-gi~v~~~~---------------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 400 (406)
T 4adb_A 358 AAKA-GVMVLIAG---------------------------------GNVVRFAPALNVSEEEVTTGLDRFAAACEHF 400 (406)
T ss_dssp HHHT-TEECEESS---------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHC-CcEEeecC---------------------------------CCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8765 99988531 3799999999999999999999999988764
No 177
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=1.2e-21 Score=212.67 Aligned_cols=351 Identities=13% Similarity=0.103 Sum_probs=211.7
Q ss_pred eEEecCCCCC---CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 038499 78 LTYADHTASG---RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIK 154 (609)
Q Consensus 78 ~vyld~~a~g---~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~ 154 (609)
..|+|+.+.. +.++.+.+++.. +. . .+. ......++++.+++++|.+ ++++|++|+. ++.
T Consensus 42 ~~ylD~~~~~~~~~~~~~~~~a~~~------~~--~-~y~----~~~~~~~l~~~la~~~~~~---~~~~~~~gt~-a~~ 104 (456)
T 2ez2_A 42 DIYIDLLTDSGTNAMSDKQWAGMMM------GD--E-AYA----GSENFYHLERTVQELFGFK---HIVPTHQGRG-AEN 104 (456)
T ss_dssp GCSEECSCSSSCCCCCHHHHHHHTT------CC--C-CSS----SCHHHHHHHHHHHHHHCCS---EEEEESSHHH-HHH
T ss_pred cceeeeccccCCccCCHHHHHHhhc------ch--h-hcc----cChhHHHHHHHHHHHhCCC---cEEEeCCcHH-HHH
Confidence 4588886542 445666666541 11 1 011 1234677899999999974 6888866655 677
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc-cchHHHHHHcCceEEEEecCC----------CCCCCHHHHHH
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH-HSNLLSWRQSLAEVVEIGLDD----------DGLLDIEALRS 223 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h-~s~~~~~~~~G~~vv~v~~~~----------~g~ld~e~L~~ 223 (609)
.++.++ +++|| +++..+| .++...++..|++++.++++. ++.+|+++|++
T Consensus 105 ~al~~l---------------~~~gd----i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~ 165 (456)
T 2ez2_A 105 LLSQLA---------------IKPGQ----YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQK 165 (456)
T ss_dssp HHHHHH---------------CCTTC----EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHH
T ss_pred HHHHHh---------------CCCCC----EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHH
Confidence 777665 36787 4555667 676778888999999998863 26789999999
Q ss_pred HHhhhccCCCceEEEEecccC-ccccccC---HHHHHHHHHHhCCeEEEeccccCC-----------cccccCC----CC
Q 038499 224 KLELYKDAKRPILGSFSACSN-VTGIYSD---TRSIARLLHQYGGFACFDFAASGP-----------YVEIDVR----SG 284 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn-~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-----------~~~id~~----~~ 284 (609)
++++.. ..+++++++++++| +||.+.| +++|+++|++||+++|+|++++.| +....+. ..
T Consensus 166 ~i~~~t-~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 244 (456)
T 2ez2_A 166 LIDEKG-AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEM 244 (456)
T ss_dssp HHHHHC-GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHH
T ss_pred HHHhcc-ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhh
Confidence 998421 01248999999998 9999987 899999999999999999998763 2111110 00
Q ss_pred CCCCccEEEEcCCCCCCCCCCcEEEEE-echhhccCCCCCCcc-CCCceEeecccccccccccccccccccCCChhHHHH
Q 038499 285 QTDGYDAIFLSTHKFLGGPGSPGILLM-TKALYQLGSFPPSTC-GGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362 (609)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~g~G~L~~-~~~~~~l~~~~p~~~-ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~ 362 (609)
....|++++|+||++++| ..|+++. ++++. +.+..... +.+. ....|. +...+
T Consensus 245 -~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~--~~~~~~~~~~~~~--------------------~~~~~~-~~~~~ 299 (456)
T 2ez2_A 245 -FSYADGCTMSGKKDCLVN-IGGFLCMNDDEMF--SSAKELVVVYEGM--------------------PSYGGL-AGRDM 299 (456)
T ss_dssp -HTTCSEEEEETTTTTCCS-SCEEEEESCHHHH--HHHHHHHHHHTCC--------------------TTTTTC-CHHHH
T ss_pred -cccCCEEEEeCcccCCCC-ceeEEEECCHHHH--HHHHHHHhhccCc--------------------ccccCc-chhHH
Confidence 013588888999997744 4699988 45552 22211100 0000 001111 11122
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec---cCCCCCcCCCCCCCCCCCC
Q 038499 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH---SSTINSSLGENTKTETDKP 439 (609)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~---~~~~~~~~~~~~~~~~~~~ 439 (609)
..+++... +... +...++.+++.+++.+.|.+. ++.+..+. ...++++.+. + .. ....
T Consensus 300 ~a~a~~~~--~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~---~~~~~~~~~~~~~~-~~-----------~~~~ 360 (456)
T 2ez2_A 300 EAMAIGLR--EAMQ-YEYIEHRVKQVRYLGDKLKAA-GVPIVEPV---GGHAVFLDARRFCE-HL-----------TQDE 360 (456)
T ss_dssp HHHHHHHH--HHTC-HHHHHHHHHHHHHHHHHHHHT-TCCBCSSC---CSSEEEEEHHHHTT-TS-----------CGGG
T ss_pred HHHHHHHH--HHhH-HHHHHHHHHHHHHHHHHHhcC-CCccccCC---CceEEEEEhHHhcC-CC-----------Chhh
Confidence 11132222 2222 455566677888888888774 67665542 2333333332 2 11 0000
Q ss_pred CChHHHHHHHhhhcCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC-CCHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY-MSNEEFEFTLEA 517 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~-~t~eeid~ll~a 517 (609)
+....+++.|.++.||.+.+ |..|.+. +...+.+ .....+++||+++.+ ++++|+++++++
T Consensus 361 ~~~~~l~~~L~~~~gv~~~~~g~~~~~~--~~~~g~~---------------~~~~~~~iRis~~~~~~t~e~i~~~~~~ 423 (456)
T 2ez2_A 361 FPAQSLAASIYVETGVRSMERGIISAGR--NNVTGEH---------------HRPKLETVRLTIPRRVYTYAHMDVVADG 423 (456)
T ss_dssp CHHHHHHHHHHHHHSEECEEESHHHHCB--CTTTCSB---------------CCCSCCEEEEECCTTTCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCeeeeccccccccc--Ccccccc---------------ccCCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 11233366664456998654 5444321 0000000 000137899999987 899999999999
Q ss_pred HHHHHHhcc
Q 038499 518 LEFIAIYGQ 526 (609)
Q Consensus 518 l~~v~~~~~ 526 (609)
|+++++...
T Consensus 424 l~~~l~~~~ 432 (456)
T 2ez2_A 424 IIKLYQHKE 432 (456)
T ss_dssp HHHHHHTGG
T ss_pred HHHHHhhhh
Confidence 999987644
No 178
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.81 E-value=8.6e-25 Score=232.72 Aligned_cols=330 Identities=13% Similarity=0.080 Sum_probs=214.5
Q ss_pred ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccchh
Q 038499 89 SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG--GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPS 166 (609)
Q Consensus 89 ~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (609)
.++.+.+++.+.+.. ... .| .....++++.+.+++++.+| .+++ +|+++ +|+++++..++.++
T Consensus 45 ~~~~v~~a~~~~~~~----~~~-~y--~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~~-~g~~~a~~~~~~~~------ 109 (392)
T 3b1d_A 45 VMPEVKQAIHDYAEQ----LVY-GY--TYASDELLQAVLDWEKSEHQYSFDKE-DIVFV-EGVVPAISIAIQAF------ 109 (392)
Confidence 456677777766532 111 11 11123334444444444455 4454 78888 78888888887776
Q ss_pred hHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecCC-C--CCCCHHHHHHHHhhhccCCCceEEEEeccc
Q 038499 167 ILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDD-D--GLLDIEALRSKLELYKDAKRPILGSFSACS 243 (609)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~--g~ld~e~L~~al~~~~~~~~~~lv~~s~~s 243 (609)
+++|| .|++..+.|+++...++..|++++.++.++ + +.+|+++|++++++ ++++++++++++
T Consensus 110 ---------~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~----~~~~~v~~~~~~ 174 (392)
T 3b1d_A 110 ---------TKEGE--AVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE----NDVKLYLLCNPH 174 (392)
Confidence 36787 699999999999888888999999999853 2 35899999999874 468888899999
Q ss_pred CccccccC---HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCCCC--CCccEEEEcCCCCCCCC-CCcEEEEEec
Q 038499 244 NVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSGQT--DGYDAIFLSTHKFLGGP-GSPGILLMTK 313 (609)
Q Consensus 244 n~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~~~--~~~D~v~~S~hK~lggp-~g~G~L~~~~ 313 (609)
||||.+.+ +++|.++|++||+++|+|++++.... ...+..+.. .+.++++.|++|++|.| ..+|++++++
T Consensus 175 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 254 (392)
T 3b1d_A 175 NPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN 254 (392)
Confidence 99999976 88899999999999999999875321 122322211 24568889999999744 3589999875
Q ss_pred h-hhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 038499 314 A-LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERAL 392 (609)
Q Consensus 314 ~-~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~ 392 (609)
+ + ++.+..... ....++++.+.... +.+.+.......+.++++.+++++++.
T Consensus 255 ~~~--~~~~~~~~~------------------------~~~~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~~l~ 307 (392)
T 3b1d_A 255 PTL--CAQFKHQQL------------------------VNNHHEVSSLGYIA-TETAYRYGKPWLVALKAVLEENIQFAV 307 (392)
Confidence 4 6 333322110 01111222222111 111111112345667778888888999
Q ss_pred HHhCC-CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhh
Q 038499 393 ERLLP-NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHL 471 (609)
Q Consensus 393 ~~L~~-~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~l 471 (609)
+.|++ +|++++..+ ..+++.+...+ .. ..+...+.+.|.++.||.+++|..|...
T Consensus 308 ~~l~~~~~~~~~~~~----~~~~~~~i~~~-~~--------------~~~~~~l~~~l~~~~gi~v~~g~~f~~~----- 363 (392)
T 3b1d_A 308 EYFAQEAPRLKVMKP----QGTYLIWLDFS-DY--------------GLTDDALFTLLHDQAKVILNRGSDYGSE----- 363 (392)
Confidence 99987 788877654 23444333222 10 0235567788864579999988765411
Q ss_pred cCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 038499 472 LDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAI 523 (609)
Q Consensus 472 l~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~ 523 (609)
.++++||+++. ++++++.++++|+++++
T Consensus 364 ----------------------~~~~iRi~~~~--~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 364 ----------------------GELHARLNIAA--PKSLVEEICKRIVCCLP 391 (392)
Confidence 14789999874 68899999999887654
No 179
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.88 E-value=9.2e-21 Score=203.77 Aligned_cols=341 Identities=11% Similarity=0.086 Sum_probs=212.0
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..| ..|+|.+++ |..++.|.+++.+.+... .+.... + ......++++++++++|.
T Consensus 47 ~g~~~~d~~g---~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~g~-- 114 (420)
T 2pb2_A 47 KGSRVWDQQG---KEYIDFAGGIAVTALGHCHPALVEALKSQGETL-WHTSNV-F-----TNEPALRLGRKLIDATFA-- 114 (420)
T ss_dssp EBTEEEETTC---CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTC-CCCCTT-S-----CCHHHHHHHHHHHHHSSC--
T ss_pred ecCEEEECCC---CEEEEccccccccccCCCCHHHHHHHHHHHHhc-ccccCc-c-----CCHHHHHHHHHHHhhCCC--
Confidence 3344444444 348887643 556788999998887653 222111 1 235678899999999984
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcCce------------E
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSLAE------------V 205 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G~~------------v 205 (609)
++|+|+ +|+++++..++.++.... +. .-.+|+. .|++....||+. .......|.+ +
T Consensus 115 -~~v~~~-~ggteA~~~al~~~~~~~----~~----~~~~g~~-~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~ 183 (420)
T 2pb2_A 115 -ERVLFM-NSGTEANETAFKLARHYA----CV----RHSPFKT-KIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADI 183 (420)
T ss_dssp -SEEEEE-SSHHHHHHHHHHHHHHHH----HH----HTCTTCC-EEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCE
T ss_pred -CeEEEe-CCHHHHHHHHHHHHHHHh----hh----ccCCCCC-EEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCe
Confidence 389999 455557777766542000 00 0015543 466655555554 4344444543 5
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccc----cCHHHHHHHHHHhCCeEEEeccccC-Cccc--
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIY----SDTRSIARLLHQYGGFACFDFAASG-PYVE-- 278 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~----~dl~~I~~la~~~g~~vivD~A~~~-~~~~-- 278 (609)
..++.+ |+++|+++++ +++++++++.++|++|.+ .++++|.++|++||+++|+|++++. +...
T Consensus 184 ~~~~~~-----d~~~le~~i~-----~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~ 253 (420)
T 2pb2_A 184 IHVPFN-----DLHAVKAVMD-----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL 253 (420)
T ss_dssp EEECTT-----CHHHHHHHCC-----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred EEecCC-----CHHHHHHHhc-----cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH
Confidence 666643 8999999998 579999999999988862 4588999999999999999999862 2111
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
+.+... ....|+++ ++|+++++.++|++++++++ ++.+.+...+ .+ + .+.+.
T Consensus 254 ~~~~~~-~~~~diit--~sK~l~~G~~iG~~~~~~~l--~~~l~~~~~~-~t---------------------~-~~~~~ 305 (420)
T 2pb2_A 254 FAYMHY-GVTPDILT--SAKALGGGFPVSAMLTTQEI--ASAFHVGSHG-ST---------------------Y-GGNPL 305 (420)
T ss_dssp SHHHHH-TCCCSEEE--ECGGGGTTSCCEEEEECHHH--HTTCC----C-CE---------------------E-CCCHH
T ss_pred HHHHhc-CCCCCeEE--ecccccCCCceEEEEEhHHH--HHhhcCCCcC-cc---------------------c-CcCHH
Confidence 100001 01468774 57999865569999999987 4444331100 00 0 12222
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKT 434 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~ 434 (609)
......+++... + .+.+.++.+++++++.+.|+++ |.+....+ ...++++.+.. ..
T Consensus 306 ~~aa~~a~L~~~--~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~v~~~~-~~---------- 365 (420)
T 2pb2_A 306 ACAVAGAAFDII--N---TPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG----MGLLIGAELKP-KY---------- 365 (420)
T ss_dssp HHHHHHHHHHHH--S---SHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE----ETTEEEEEECG-GG----------
T ss_pred HHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe----cceEEEEEECC-Cc----------
Confidence 222223333332 1 1566777888888888887654 43332211 33555655543 10
Q ss_pred CCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 038499 435 ETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFT 514 (609)
Q Consensus 435 ~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~l 514 (609)
......+.+.|.+ .||.++++. ++++||++++.+|++|++++
T Consensus 366 ----~~~~~~l~~~l~~-~Gi~v~~~~---------------------------------~~~iRl~~~~~~t~eei~~~ 407 (420)
T 2pb2_A 366 ----KGRARDFLYAGAE-AGVMVLNAG---------------------------------ADVMRFAPSLVVEEADIHEG 407 (420)
T ss_dssp ----TTCHHHHHHHHHH-TTEECEESS---------------------------------TTEEEECCCTTCCHHHHHHH
T ss_pred ----hHHHHHHHHHHHH-CCCEEEeCC---------------------------------CCEEEEECCCCCCHHHHHHH
Confidence 0146778888876 699988531 37899999999999999999
Q ss_pred HHHHHHHHHh
Q 038499 515 LEALEFIAIY 524 (609)
Q Consensus 515 l~al~~v~~~ 524 (609)
+++|+++++.
T Consensus 408 ~~~l~~~l~~ 417 (420)
T 2pb2_A 408 MQRFAQAVGK 417 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 180
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.88 E-value=1.2e-21 Score=212.64 Aligned_cols=330 Identities=13% Similarity=0.057 Sum_probs=210.0
Q ss_pred EEecCCCCCCChHHHHHHHHHhhc-CCccCCCCCCchhhHHHHHHHHHHHHHHHHHh-CCC-----CCCcEEE--eCChH
Q 038499 79 TYADHTASGRSLRYIENYIINNVL-PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL-GGG-----QEDAMIF--CGSGT 149 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~-~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~-g~~-----~~~~vif--t~sGt 149 (609)
+|+|+.+..+..+.+.+++.+... ....+.... ...| ..++|+.+++++ |.+ ++ +|++ | +|+
T Consensus 58 ~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~-~~~G------~~~lr~~ia~~l~g~~~~~~~~~-~i~~~~t-~gg 128 (448)
T 3meb_A 58 AYRDESGKPWILPAVKEAEAIISSDLSKYNKEYP-PVAG------FPLFLEAAQFLMFGKDSKAAQEG-RIASCQS-LSG 128 (448)
T ss_dssp CCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCC-CTTC------CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-SHH
T ss_pred cccCCCCCEechHHHHHHHHHHhhcccCCCCCCC-CCcc------hHHHHHHHHHHhcCCCccccCcC-cEEEEEC-CcH
Confidence 478888888888888888654331 111111111 1112 456788888887 776 44 8998 8 777
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCceEEEEec-CCC--CCCCHHHHH
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLAEVVEIGL-DDD--GLLDIEALR 222 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~-~~~--g~ld~e~L~ 222 (609)
+++++.++..+. .+.+|| .|+++.+.|+++...++ ..|++++.++. +++ +.+|+++|+
T Consensus 129 t~al~l~~~~~~-------------~~~~gd--~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~ 193 (448)
T 3meb_A 129 TGSLHIGFEFLH-------------LWMPKA--EFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTK 193 (448)
T ss_dssp HHHHHHHHHHHH-------------HHCTTC--CEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHH
T ss_pred HHHHHHHHHHHH-------------HhCCCC--EEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHH
Confidence 878877543322 146888 59999999999998899 89999999998 554 789999999
Q ss_pred HHHhhhccCCCceEEEEecccCccccccCHH---HHHHHHHHhCCeEEEeccccCC-cccc--c---CCCC-CCCCccEE
Q 038499 223 SKLELYKDAKRPILGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGP-YVEI--D---VRSG-QTDGYDAI 292 (609)
Q Consensus 223 ~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD~A~~~~-~~~i--d---~~~~-~~~~~D~v 292 (609)
+++++. .++++++++++++||||.+.+.+ +|+++|++||+++++|+++... +... + +... ......++
T Consensus 194 ~~l~~~--~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 271 (448)
T 3meb_A 194 KDIQSA--PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLV 271 (448)
T ss_dssp HHHHHS--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEE
T ss_pred HHHHhC--CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEE
Confidence 999842 12578999999999999998854 5999999999999999996632 2221 1 1100 01123467
Q ss_pred EEcCCCCCCCCC-CcEEE--EE--------ec-----hhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 293 FLSTHKFLGGPG-SPGIL--LM--------TK-----ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 293 ~~S~hK~lggp~-g~G~L--~~--------~~-----~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
+.|+||.+|.++ ++|++ ++ .+ ++ +..+. . ..+....+
T Consensus 272 ~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l--~~~l~------------------------~-~~~~~~~~ 324 (448)
T 3meb_A 272 AQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAM--VSGMT------------------------L-QIRKTWSM 324 (448)
T ss_dssp EEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHH--HHHHH------------------------H-HHHTTTSS
T ss_pred EecccccCCCccccceeeeeeeccccccccCCHHHHHHH--HHHHH------------------------H-HHhcccCC
Confidence 889999998442 48998 55 33 22 11110 0 01111222
Q ss_pred h-hHHHHHHHHHHHHH---H-H-hcCHHHHHHHHHHHHHHHHHHhCCC--Cc------eEEeCCCCCCCcceEEEEeccC
Q 038499 357 P-QVIQMIRAALAFWV---K-E-YIGHEVIKKQEETYIERALERLLPN--QN------IKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 357 p-~i~~~~~aal~~~~---~-~-~~g~~~i~~~~~~l~~~~~~~L~~~--p~------i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
+ .+.+.+.+. .+.. . + ....+.+.++.+++++++.+.|.++ ++ +.+..+ ..++++|. .
T Consensus 325 ~~~~~~~a~~~-~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~----~~g~~~~~--~- 396 (448)
T 3meb_A 325 SAIHGAYIVQV-IVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILT----AIGMFTFT--G- 396 (448)
T ss_dssp CCHHHHHHHHH-HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHH----CCSSEEEC--C-
T ss_pred ccHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCC----CceEEEec--C-
Confidence 3 333322211 1100 0 0 0125677788888899999988765 44 332222 23444443 2
Q ss_pred CCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEec
Q 038499 423 TINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISF 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~ 502 (609)
+.. +++..|.+++||.+.+|. + |||+
T Consensus 397 -----------------~~~-~~~~~ll~~~gV~v~~G~----------------------------------g--Ris~ 422 (448)
T 3meb_A 397 -----------------LTP-EHVDYLKEKWSIYLVKAG----------------------------------G--RMSM 422 (448)
T ss_dssp -----------------CCH-HHHHHHHHHHCEEECSGG----------------------------------G--EEEG
T ss_pred -----------------CCH-HHHHHHHHhCCEEEeCCC----------------------------------c--EEEE
Confidence 233 445555566799998541 2 9999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 038499 503 PYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 503 ~~~~t~eeid~ll~al~~v~~~ 524 (609)
+.. +++++++++++|+++++.
T Consensus 423 a~~-~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 423 CGL-TESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp GGC-CTTTHHHHHHHHHHHHHH
T ss_pred ecC-CHHHHHHHHHHHHHHHHh
Confidence 643 566799999999999874
No 181
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.88 E-value=3e-21 Score=206.11 Aligned_cols=307 Identities=15% Similarity=0.099 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH
Q 038499 119 TTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW 198 (609)
Q Consensus 119 ~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (609)
......++++.++++.|.+ .++++++| ++|+..++. + +++|| .|+++...|++....+
T Consensus 65 ~~p~~~~l~~~la~l~g~~---~~~~~~sG-~~Ai~~~~~-l---------------~~~gd--~Vi~~~~~y~~~~~~~ 122 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGGT---RAFAFASG-MAATSTVME-L---------------LDAGS--HVVAMDDLYGGTFRLF 122 (400)
T ss_dssp CCHHHHHHHHHHHHHHTCS---EEEEESSH-HHHHHHHHT-T---------------SCTTC--EEEEESSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC---CEEEecCH-HHHHHHHHH-H---------------cCCCC--EEEEeCCCchHHHHHH
Confidence 3455778999999999985 34555588 556776422 2 47888 6999999999776665
Q ss_pred HH-----cCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEecccc
Q 038499 199 RQ-----SLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 199 ~~-----~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~ 273 (609)
.. .|++++.++.+ |+++|+++++ +++++|++++++||||.+.|+++|+++|++||+++|+|++++
T Consensus 123 ~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~ 192 (400)
T 3nmy_A 123 ERVRRRTAGLDFSFVDLT-----DPAAFKAAIR-----ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFA 192 (400)
T ss_dssp HHTHHHHHCCEEEEECTT-----SHHHHHHHCC-----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHhhHhhcCeEEEEECCC-----CHHHHHHHhc-----cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc
Confidence 43 59999999875 8999999998 689999999999999999999999999999999999999987
Q ss_pred CCcccccCCCCCCCCccEEEEcCCCCCCCCC-C-cE-EEEEec-hhhccCCCCCCccCCCceEeeccccccccccccccc
Q 038499 274 GPYVEIDVRSGQTDGYDAIFLSTHKFLGGPG-S-PG-ILLMTK-ALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIE 349 (609)
Q Consensus 274 ~~~~~id~~~~~~~~~D~v~~S~hK~lggp~-g-~G-~L~~~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (609)
.+.....+. .++|+++.|+||+++||+ . .| ++++++ ++ .+.+...
T Consensus 193 ~~~~~~~~~----~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~--~~~l~~~------------------------- 241 (400)
T 3nmy_A 193 SPMLQRPLS----LGADLVVHSATKYLNGHSDMVGGIAVVGDNAEL--AEQMAFL------------------------- 241 (400)
T ss_dssp HHHHCCGGG----GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHH--HHHHHHH-------------------------
T ss_pred ccccCChhh----cCCcEEEecCccccCCCCCcceeEEEEeCCHHH--HHHHHHH-------------------------
Confidence 554221111 278999999999999874 2 35 455443 33 1121100
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceE-EeCCCC-------------CCCcceE
Q 038499 350 ERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIK-ILGNTS-------------TKRQAIL 415 (609)
Q Consensus 350 ~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~-v~~~~~-------------~~r~~~~ 415 (609)
......+.+.... .+++. .....+...++..+.++++.+.|++.|.+. +..|.- ....+++
T Consensus 242 ~~~~g~~~~~~~a-~~~l~----~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~ 316 (400)
T 3nmy_A 242 QNSIGGVQGPFDS-FLALR----GLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIV 316 (400)
T ss_dssp HHHHCCBCCHHHH-HHHHH----HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEE
T ss_pred HHhcCCCCCHHHH-HHHHH----hHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceE
Confidence 0000111111111 11111 112345556677788889999999998876 433310 1135688
Q ss_pred EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccC---ChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 416 SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACA---GPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 416 ~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca---~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+|.+.. +. .....+.+.| +.+++.+..|..++ .|.......+..+...+ .|
T Consensus 317 ~~~l~~-~~---------------~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------~g 370 (400)
T 3nmy_A 317 SIVLKG-GF---------------DAAKRFCEKT-ELFTLAESLGGVESLVNHPAVMTHASIPVARREQ---------LG 370 (400)
T ss_dssp EEEETT-HH---------------HHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHH---------HT
T ss_pred EEEeCC-cH---------------HHHHHHHHcC-CcceEecCCCCCcceeeCccccccccCCHHHHHh---------cC
Confidence 888764 11 1234555666 45677777776543 24333222333222111 24
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
+.++.+|+|++....++.++.+.++|+
T Consensus 371 i~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 371 ISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp CCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 567999999998777776666666654
No 182
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.88 E-value=1.7e-20 Score=199.54 Aligned_cols=342 Identities=13% Similarity=0.056 Sum_probs=205.4
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..|+ .|+|+.++ |..++.|.+++.+.+....... . ........++++++++++|.
T Consensus 26 ~G~~~~d~~g~---~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~------~~~~~~~~~l~~~la~~~~~-- 93 (395)
T 3nx3_A 26 QGVYLFDDKAK---KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS-N------LYYNENIAAAAKNLAKASAL-- 93 (395)
T ss_dssp EBTEEEETTCC---EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC-T------TSBCHHHHHHHHHHHHHHTC--
T ss_pred eeeEEEECCCC---EEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc-c------ccCCHHHHHHHHHHHHhcCC--
Confidence 34444444443 48898765 3457889999988876432111 1 11245678899999999983
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-------------cCceE
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ-------------SLAEV 205 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-------------~G~~v 205 (609)
+ +++|++ |.++++..++.++... .++ .-.+++ .|++.+..||+....... .+.++
T Consensus 94 ~-~v~~~~-gg~ea~~~al~~~~~~----~~~----~g~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (395)
T 3nx3_A 94 E-RVFFTN-SGTESIEGAMKTARKY----AFN----KGVKGG--QFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGV 161 (395)
T ss_dssp S-EEEEES-SHHHHHHHHHHHHHHH----HHH----TTCTTC--EEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCE
T ss_pred C-eEEEeC-CHHHHHHHHHHHHHHH----hhc----cCCCCC--EEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCc
Confidence 3 899995 4455666665543100 000 002344 566666666654322221 13456
Q ss_pred EEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCccc--
Q 038499 206 VEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVE-- 278 (609)
Q Consensus 206 v~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~-- 278 (609)
..++.+ |+++|+++++ +++++++++.++|++|.+.+ +++|.++|++||+++|+|++++ .+...
T Consensus 162 ~~~~~~-----d~~~l~~~l~-----~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~ 231 (395)
T 3nx3_A 162 KFAKYN-----DISSVEKLVN-----EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF 231 (395)
T ss_dssp EEECTT-----CHHHHHTTCC-----TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred EEeCCC-----CHHHHHHhcc-----CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc
Confidence 666654 7999999997 57899999999999999988 9999999999999999999987 32221
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechh-hccCCCCCCccCCCceEeecccccccccccccccccccCCCh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKAL-YQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP 357 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~-~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp 357 (609)
...... ....|++++| |.++++.++|++++++++ .. .+.+...++.. .+.+
T Consensus 232 ~~~~~~-~~~~d~~t~s--K~~~~G~~~G~~~~~~~~~~~--~~~~~~~~~~~-----------------------~~~~ 283 (395)
T 3nx3_A 232 FAYEHA-QILPDIMTSA--KALGCGLSVGAFVINQKVASN--SLEAGDHGSTY-----------------------GGNP 283 (395)
T ss_dssp SGGGGG-TCCCSEEEEC--GGGTTTSCCEEEEECHHHHHH--HSCTTCCSSCB-----------------------SCCH
T ss_pred hhHHhc-CCCCCEEEec--ccccCCCceEEEEEchhhhhh--hcCCcccCCCC-----------------------CCCH
Confidence 111111 1135777655 988876678999999887 32 23222111110 1122
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC
Q 038499 358 QVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD 437 (609)
Q Consensus 358 ~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~ 437 (609)
.......+++.... +..-.+.+.+....+++.+.+.+..+|.+....+ ...++++.+.. .
T Consensus 284 ~~~~aa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~-~-------------- 343 (395)
T 3nx3_A 284 LVCAGVNAVFEIFK-EEKILENVNKLTPYLEQSLDELINEFDFCKKRKG----LGFMQGLSLDK-S-------------- 343 (395)
T ss_dssp HHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEECT-T--------------
T ss_pred HHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----EEEEEEEEeCC-c--------------
Confidence 22222233333221 1111233333333334444443334555543322 23455555543 1
Q ss_pred CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 038499 438 KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEA 517 (609)
Q Consensus 438 ~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~a 517 (609)
.....+.+.|.+ .||.++++. ++++||++++..|++|+++++++
T Consensus 344 --~~~~~~~~~l~~-~Gi~v~~~~---------------------------------~~~iRi~~~~~~t~e~i~~~l~~ 387 (395)
T 3nx3_A 344 --VKVAKVIQKCQE-NALLLISCG---------------------------------ENDLRFLPPLILQKEHIDEMSEK 387 (395)
T ss_dssp --SCHHHHHHHHHH-TTEECEEET---------------------------------TTEEEECCCTTCCHHHHHHHHHH
T ss_pred --chHHHHHHHHHH-CCCEEecCC---------------------------------CCEEEEECCCCCCHHHHHHHHHH
Confidence 246788888866 599988531 37999999999999999999999
Q ss_pred HHHHHHh
Q 038499 518 LEFIAIY 524 (609)
Q Consensus 518 l~~v~~~ 524 (609)
|++++++
T Consensus 388 l~~~l~~ 394 (395)
T 3nx3_A 388 LRKALKS 394 (395)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998763
No 183
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.88 E-value=6.7e-21 Score=199.71 Aligned_cols=296 Identities=15% Similarity=0.100 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH--H-
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL--S- 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--~- 197 (609)
....++++++++++|.+. . +++++|+. ++..++.++. .+||+.+|++++..|.+... .
T Consensus 48 ~~~~~l~~~la~~~~~~~--~-i~~~~g~~-a~~~a~~~~~---------------~~g~~~vvi~~~~~~~~~~~~~~~ 108 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS--A-VFFPSGTM-AQQIALRIWA---------------DRKENRRVAYHPLSHLEIHEQDGL 108 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE--E-EEESCHHH-HHHHHHHHHH---------------HHHTCCEEEECTTCHHHHSSTTHH
T ss_pred HHHHHHHHHHHHHhCCCc--E-EEeCCHHH-HHHHHHHHHH---------------hcCCCcEEEEeccceeeehhcchH
Confidence 457789999999999863 3 55557765 6666666552 45664357777777665432 2
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcc-ccccCHHHH---HHHHHHhCCeEEEecccc
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVT-GIYSDTRSI---ARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~dl~~I---~~la~~~g~~vivD~A~~ 273 (609)
....|++++.++. +++.+|+++|+++ . ++++++++++++|+| |.+.|.+++ .++|++||+++|+|+++.
T Consensus 109 ~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-----~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~ 181 (359)
T 3pj0_A 109 KELQQITPLLLGT-ANQLLTIDDIKSL-R-----EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARL 181 (359)
T ss_dssp HHHHCCEEEECSC-TTSCCCHHHHHTC-S-----SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTC
T ss_pred HHhcCceEEecCC-cCCCcCHHHHHhc-c-----CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 2456999999987 5678999999987 4 689999999999998 798886655 999999999999999865
Q ss_pred CCcc---cccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 GPYV---EIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~~~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
.+.. ......+. .+.|++++|+||++++|.| |+++.++++. +.+.... .
T Consensus 182 ~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~--~~~~~~~------------------------~ 233 (359)
T 3pj0_A 182 WEITPFYQKSAEEIC-ALFDSVYVSFYKGIGGIAG-AILAGNDDFV--QEAKIWK------------------------R 233 (359)
T ss_dssp GGGHHHHTCCHHHHH-TTCSEEEEESSSTTCCSSC-EEEEECHHHH--HHHHHHH------------------------H
T ss_pred hcchhhhCCCHHHhh-ccCCEEEEeccccCCCcce-EEEECCHHHH--HHHHHHH------------------------H
Confidence 4321 11111110 2579999999999998877 8888888873 2221100 0
Q ss_pred cccCCC--hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcC
Q 038499 351 RESGGT--PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSL 428 (609)
Q Consensus 351 r~~~gt--p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~ 428 (609)
....++ .+..+ .+++. .+.+. .+. .++..+.++++.+.|+++|++++.... ...+++++.+.. ..
T Consensus 234 ~~~~~~~~~~~~~--~a~~~-~l~~~--~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~~~-~~---- 300 (359)
T 3pj0_A 234 RYGGDLISLYPYI--LSADY-YFEKR--IGK-MAEYFEAAKGLAERFNSCSGVKTVPEV--PVSNMFHVYFEN-SA---- 300 (359)
T ss_dssp HTTCCCSCCHHHH--HHHHH-HHHHH--GGG-HHHHHHHHHHHHHHHHTSTTEEEESSS--CSSSEEEEEESS-CH----
T ss_pred HhCCCcchhHHHH--HHHHH-HHHHH--HHH-hHHHHHHHHHHHHHHhhCCCceeeccC--CcceEEEEEecC-cc----
Confidence 000011 12222 11211 12222 122 334567788899999999999986321 234445544443 10
Q ss_pred CCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCC---C
Q 038499 429 GENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPY---Y 505 (609)
Q Consensus 429 ~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~---~ 505 (609)
..+..++.+.|.+ .||.+++|..+..+ ..+++|++++. .
T Consensus 301 ----------~~~~~~l~~~l~~-~GV~v~~g~~~~~~---------------------------~~~~~r~~i~~~~~~ 342 (359)
T 3pj0_A 301 ----------DEIGAILTKIQDE-TGVGISGYLQEKSA---------------------------DVCAFEVSVGDAFAE 342 (359)
T ss_dssp ----------HHHHHHHHHHHHH-HCEECCSCCEEEET---------------------------TEEEEEEECCTTGGG
T ss_pred ----------chhHHHHHHHHHh-cCcEecCCccccCC---------------------------CceEEEEEecCcccc
Confidence 0135678888865 59999988654421 13789998853 3
Q ss_pred CCHHHHHHHHHHHHHH
Q 038499 506 MSNEEFEFTLEALEFI 521 (609)
Q Consensus 506 ~t~eeid~ll~al~~v 521 (609)
.+.++++..++.|.+.
T Consensus 343 ~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 343 IPAKNLELVFRCLEKE 358 (359)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc
Confidence 5788888888877654
No 184
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.88 E-value=2.5e-22 Score=213.59 Aligned_cols=330 Identities=17% Similarity=0.131 Sum_probs=211.7
Q ss_pred EecCCCCCCChHHHHHHHHH-hhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-----CCC--cEEEeCChHHH
Q 038499 80 YADHTASGRSLRYIENYIIN-NVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-----QED--AMIFCGSGTTA 151 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~-~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-----~~~--~vift~sGtta 151 (609)
|+|.....+.++.|.+++.+ .+... .. + .|... ....++|+.++++++.. ..+ +|++| +|+++
T Consensus 36 y~d~~~~~~~~~~v~~a~~~~~~~~~-~~-~--~y~~~----~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t-~g~~~ 106 (397)
T 3fsl_A 36 YYNEDGIIPQLQAVAEAEARLNAQPH-GA-S--LYLPM----EGLNCYRHAIAPLLFGADHPVLKQQRVATIQT-LGGSG 106 (397)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHSCC-CC-C--CCCCT----TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE-SHHHH
T ss_pred EECCCCCccCcHHHHHHHHhhccCcc-cc-c--cCCCC----CchHHHHHHHHHHHhcCCcccccccceEEEEc-CCcHH
Confidence 67777777788999999988 66531 11 1 11111 11356777777777542 224 68888 78888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec--CCCCCCCHHHHHHHHhhhc
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL--DDDGLLDIEALRSKLELYK 229 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~--~~~g~ld~e~L~~al~~~~ 229 (609)
++..+++.+. .+++|| .|++..+.|+++...++..|++++.++. ++++.+|+++|++++++.
T Consensus 107 a~~~~~~~~~-------------~~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 170 (397)
T 3fsl_A 107 ALKVGADFLK-------------RYFPES--GVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL- 170 (397)
T ss_dssp HHHHHHHHHH-------------HHCTTC--CEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC-
T ss_pred HHHHHHHHHH-------------hcCCCC--eEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC-
Confidence 8988865432 147888 5899999999999899999999999998 456789999999999842
Q ss_pred cCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCccc-----ccCCCC-CCCCccEEEEcCCCCC
Q 038499 230 DAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVE-----IDVRSG-QTDGYDAIFLSTHKFL 300 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~~-----id~~~~-~~~~~D~v~~S~hK~l 300 (609)
.++++++++++++||||.+.+. ++|+++|++||+++|+|++++..... ..+... ...+.++++.|++|.+
T Consensus 171 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 249 (397)
T 3fsl_A 171 -QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF 249 (397)
T ss_dssp -CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT
T ss_pred -CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc
Confidence 2467899999999999999765 58999999999999999997654321 111110 0124468888999999
Q ss_pred CCC-CCcEEEEEe---chhhccCCCCCCccCCCceEeecccccccccccccccccccCCC-hhHHHHHHH-HHHH-HHHH
Q 038499 301 GGP-GSPGILLMT---KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT-PQVIQMIRA-ALAF-WVKE 373 (609)
Q Consensus 301 ggp-~g~G~L~~~---~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt-p~i~~~~~a-al~~-~~~~ 373 (609)
|.| .++|++++. ++. +..+... ... ..+...++ +.+.+.+.+ .+.- .+.+
T Consensus 250 ~~~G~riG~~~~~~~~~~~--~~~~~~~--------------------~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 306 (397)
T 3fsl_A 250 SLYGERVGGLSVMCEDAEA--AGRVLGQ--------------------LKA-TVRRNYSSPPNFGAQVVAAVLNDEALKA 306 (397)
T ss_dssp TCGGGCCEEEEEECSSHHH--HHHHHHH--------------------HHH-HHHTTTSSCCSHHHHHHHHHHTSHHHHH
T ss_pred cCcCCCeeEEEEecCCHHH--HHHHHHH--------------------HHH-HHHhccCCCCHHHHHHHHHHhcCHHHHH
Confidence 833 248999863 232 1111000 000 00111122 223332211 1110 0000
Q ss_pred --hcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHH
Q 038499 374 --YIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATL 448 (609)
Q Consensus 374 --~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 448 (609)
....+.+.++.+++++++.+.|++++ ++.+..+ ..+++.|.- ++...+.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~~--------------------~~~~~~~~~ 362 (397)
T 3fsl_A 307 SWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLN----QRGMFSYTG--------------------LSAAQVDRL 362 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHH----CCSSEEECC--------------------CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecC----CceEEEecC--------------------CCHHHHHHH
Confidence 22356777888888899999887654 4554433 234444432 235566666
Q ss_pred HhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 449 LNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 449 L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
| +++||.+++| + |||++.. ++++++.++++|+++
T Consensus 363 l-~~~gi~v~~g-----------------------------------~--Ris~~~~-~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 363 R-EEFGVYLIAS-----------------------------------G--RMCVAGL-NTANVQRVAKAFAAV 396 (397)
T ss_dssp H-HTTCEECCTT-----------------------------------C--EEEGGGC-CTTTHHHHHHHHHHH
T ss_pred H-HhCCEEECCC-----------------------------------C--eEEEEec-CHhhHHHHHHHHHhh
Confidence 6 4579998732 2 9999744 557799999999875
No 185
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.88 E-value=1.7e-21 Score=208.54 Aligned_cols=328 Identities=9% Similarity=-0.064 Sum_probs=199.4
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh----CCCCCCcEEEeCChHHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL----GGGQEDAMIFCGSGTTAAIKR 155 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~----g~~~~~~vift~sGttaal~~ 155 (609)
|+|+....+.++.|.+++.+..... .+ .|....+ ..++++.+++++ +.+..++|++| +|+++++..
T Consensus 47 ~~~~~~~~~~~~~v~~a~~~~~~~~---~~--~Y~~~~g----~~~lr~~la~~~~~~~~~~~~~~i~~t-~g~~~al~~ 116 (413)
T 3t18_A 47 LLDDKGKIIALPSVYDRLDEMDRSH---IA--SYAPIEG----EKDYRKIVIDTLFGPYKPEGYISAIAT-PGGTGAIRS 116 (413)
T ss_dssp CBCTTSCBCCCHHHHHHHHHSCHHH---HH--SCCCTTC----CHHHHHHHHHHHHGGGCCSSEEEEEEE-SHHHHHHHH
T ss_pred ccCCCCCcCChHHHHHHHHhcCccc---cc--CcCCCCC----CHHHHHHHHHHHhcccCccccCcEEEc-CccHHHHHH
Confidence 4555555667788888876532110 00 0111111 234555555544 33222278998 788889999
Q ss_pred HHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC-CCCCCCHHHHHHHHhhhccCCCc
Q 038499 156 LQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD-DDGLLDIEALRSKLELYKDAKRP 234 (609)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~~g~ld~e~L~~al~~~~~~~~~ 234 (609)
++..+ +++|| .|+++.+.|+++...++..|++++.+++. +++.+|+++|++++++... +++
T Consensus 117 ~~~~~---------------~~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~~~ 178 (413)
T 3t18_A 117 AIFSY---------------LDEGD--PLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIR-DSD 178 (413)
T ss_dssp HHHHH---------------CCSSC--EEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHH-HCS
T ss_pred HHHHh---------------cCCCC--EEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhh-cCC
Confidence 88876 47898 69999999999998999999999999984 4568999999999974110 156
Q ss_pred e-EEEEecc-cCccccccCHHHHH---HHHH------HhCCeEEEeccccCC-cccc---cC-CCCCCCCcc---EEEEc
Q 038499 235 I-LGSFSAC-SNVTGIYSDTRSIA---RLLH------QYGGFACFDFAASGP-YVEI---DV-RSGQTDGYD---AIFLS 295 (609)
Q Consensus 235 ~-lv~~s~~-sn~TG~~~dl~~I~---~la~------~~g~~vivD~A~~~~-~~~i---d~-~~~~~~~~D---~v~~S 295 (609)
+ ++++++| +||||.+.|.+++. ++|+ +||+++|+|+++... +... .+ ........+ +++.|
T Consensus 179 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 258 (413)
T 3t18_A 179 RIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFS 258 (413)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEe
Confidence 7 8888998 99999999976654 5555 899999999996421 1110 11 000000112 67789
Q ss_pred CCCCCCCC-CCcEEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHH
Q 038499 296 THKFLGGP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWV 371 (609)
Q Consensus 296 ~hK~lggp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~ 371 (609)
++|.+|.| ..+|++++ ++++ ++.+..... + ..+....+++......+ ..++
T Consensus 259 ~sK~~~~~G~riG~~~~~~~~~~~--~~~~~~~~~-----------------~----~~~~~~~~~~~~~~~a~-~~~l- 313 (413)
T 3t18_A 259 MSKSHTAYGLRSGAAVGISSSKEI--IEEFEASLA-----------------H----SARCNWSNGTHAAQNIL-IELE- 313 (413)
T ss_dssp HHHHTTCGGGCCEEEEEEESCHHH--HHHHHHHHH-----------------H----HHHHHTSSCCHHHHHHH-HHTT-
T ss_pred cCccCCCcCcCcEEEEEecCCHHH--HHHHHHHHH-----------------H----hhhccccCCChHHHHHH-HHHh-
Confidence 99999844 34899998 7776 222211000 0 00000112222222111 1111
Q ss_pred HHh------cCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH
Q 038499 372 KEY------IGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV 445 (609)
Q Consensus 372 ~~~------~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v 445 (609)
.+. ...+.++++.++.++++.+.|.++ ++++..+ ..+++.|.-.. +..++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~~~~~~~~~~-------------------~~~~~ 369 (413)
T 3t18_A 314 RAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPY----FGGFFTFIPTD-------------------KAFDI 369 (413)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC----CSSSCEEEECS-------------------CHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCC----CceEEEEeCCC-------------------CHHHH
Confidence 010 123456677777888888888876 7776654 23444443222 46788
Q ss_pred HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 446 ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 446 ~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.+.|. +.||.+++| ++++||+++...+++.++.+.++++
T Consensus 370 ~~~l~-~~gv~v~~g----------------------------------~~~iRis~~~~~~~~~l~~l~~~l~ 408 (413)
T 3t18_A 370 VKDLE-KENIFTIPS----------------------------------AKGIRVAICGVGEEKIPKLVQRLAF 408 (413)
T ss_dssp HHHHH-HTTEECEEC----------------------------------SSEEEECTTTSCGGGHHHHHHHHHH
T ss_pred HHHHH-hCCEEEecC----------------------------------CCceEEEEeeCCHHHHHHHHHHHHH
Confidence 88885 469999864 2789999985555444444444443
No 186
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.87 E-value=2e-21 Score=203.71 Aligned_cols=293 Identities=16% Similarity=0.110 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH---H
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL---S 197 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~---~ 197 (609)
....++++++++++|.+. . +++++|+. ++..++.++. .+||+.+|++++..|++... .
T Consensus 47 ~~~~~l~~~la~~~~~~~--~-i~~~~G~~-a~~~al~~~~---------------~~gd~~~vi~~~~~~~~~~~~~~~ 107 (357)
T 3lws_A 47 AIIEPFEQKFADVLGMDD--A-VFFPSGTM-AQQVALRIWS---------------DETDNRTVAYHPLCHLEIHEQDGL 107 (357)
T ss_dssp TTHHHHHHHHHHHHTCSE--E-EEESCHHH-HHHHHHHHHH---------------HHHTCCEEEECTTCHHHHSSTTHH
T ss_pred hHHHHHHHHHHHHhCCCc--E-EEecCcHH-HHHHHHHHHh---------------hcCCCcEEEecccceeeeeccchh
Confidence 346788999999999842 3 44457776 5555555542 45553368888888876543 3
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCcc-ccccC---HHHHHHHHHHhCCeEEEecccc
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVT-GIYSD---TRSIARLLHQYGGFACFDFAAS 273 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~d---l~~I~~la~~~g~~vivD~A~~ 273 (609)
....|++++.++. +++.+|+++|+++ . +++++++++++||| |.+.+ +++|.++|++||+++|+|+++.
T Consensus 108 ~~~~g~~~~~v~~-~~~~~d~~~l~~~-~------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 179 (357)
T 3lws_A 108 KELHPIETILVGA-ADRLMTLDEIKAL-P------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARL 179 (357)
T ss_dssp HHHSSCEEEECSC-TTSCCCHHHHHTC-C------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTH
T ss_pred hhccCcEEEEecC-CCCCcCHHHHhcC-c------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchh
Confidence 4456999998884 4567999999876 1 38899999999998 99876 7889999999999999999875
Q ss_pred C---CcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 G---PYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~---~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
. +......... ...+|+++.|+||+++||.| |+++.++++. +.+.... .
T Consensus 180 ~~~~~~~~~~~~~~-~~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~--~~~~~~~------------------------~ 231 (357)
T 3lws_A 180 FEMLPYYEKTAAEI-AGLFDSIYISFYKGLGGIAG-AILAGPAAFC--QTARIWK------------------------R 231 (357)
T ss_dssp HHHHHHHTCCHHHH-HTTSSEEEEESSSTTCCSSC-EEEEECHHHH--HHHHHHH------------------------H
T ss_pred hhhhhhcCCChHHH-HhcCCEEEEeccccCCCCce-EEEEcCHHHH--HHHHHHH------------------------H
Confidence 1 1111111111 02568999999999988988 9999988872 2221100 0
Q ss_pred cccCC--ChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEe-CCCCCCCcceEEEEeccCCCCCc
Q 038499 351 RESGG--TPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKIL-GNTSTKRQAILSFNIHSSTINSS 427 (609)
Q Consensus 351 r~~~g--tp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~-~~~~~~r~~~~~f~~~~~~~~~~ 427 (609)
....+ +.+..+. +++. .+.+. .+.+ ++..+.++++.+.|+++|++++. .+ ...+++++.+.. ..
T Consensus 232 ~~~~~~~~~~~~~~--~~~~-~l~~~--~~~~-~~~~~~~~~l~~~L~~~~g~~~~~~~---~~~~~~~~~~~~-~~--- 298 (357)
T 3lws_A 232 RYGGDLISLYPYIV--SADY-YYELR--KDRM-GQYYEQAKQLAEQFNALPGVHTTPEV---PVSNMFHLHFDG-QA--- 298 (357)
T ss_dssp HTTCCCSCCHHHHH--HHHH-HHHHH--TTCH-HHHHHHHHHHHHHHHTSTTEEEESSS---CSSSEEEEEEES-CH---
T ss_pred HhcCCcccchHHHH--HHHH-HHHHH--HHHH-HHHHHHHHHHHHHHHhCCCCeeccCC---CcceEEEEEecC-Ch---
Confidence 00001 1122221 1111 11121 1222 23466778899999999999985 33 234555555543 10
Q ss_pred CCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC--
Q 038499 428 LGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY-- 505 (609)
Q Consensus 428 ~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~-- 505 (609)
..+...+.+.|.+ .||.+++|..+. | ..+++|++++..
T Consensus 299 -----------~~~~~~~~~~l~~-~Gi~v~~g~~~~-~---------------------------~~~~~r~~i~~~~~ 338 (357)
T 3lws_A 299 -----------ADISPKLEQVQEE-TGLGFVGYLVDK-D---------------------------GYCSTEISVGDAYG 338 (357)
T ss_dssp -----------HHHHHHHHHHHHH-HCEESCSCCEEC-S---------------------------SEEEEEEEBCTTGG
T ss_pred -----------HHHHHHHHHHHHh-cCeEEecccccC-C---------------------------CceEEEEEecchhh
Confidence 0024677788865 599999885432 1 136899998733
Q ss_pred -CCHHHHHHHHHHHHHH
Q 038499 506 -MSNEEFEFTLEALEFI 521 (609)
Q Consensus 506 -~t~eeid~ll~al~~v 521 (609)
.++++++..++.|.+.
T Consensus 339 ~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 339 ELDQQTRDAGFARLRQA 355 (357)
T ss_dssp GSCHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHh
Confidence 5778888888877664
No 187
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=7e-22 Score=211.54 Aligned_cols=326 Identities=14% Similarity=0.095 Sum_probs=211.6
Q ss_pred EEecCCCCCCChHHHHHHHHH-hhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC------CCCCcEEE--eCChH
Q 038499 79 TYADHTASGRSLRYIENYIIN-NVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG------GQEDAMIF--CGSGT 149 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~-~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~------~~~~~vif--t~sGt 149 (609)
.|+|+.+..+.++.+.+++.+ .+.. ...+. |.. .....++|+.++++++. +++ +|++ | +|+
T Consensus 38 ~~~d~~~~~~~~~~v~~a~~~~~~~~--~~~~~--y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~t-~g~ 107 (412)
T 1yaa_A 38 AYRDDNGKPWVLPSVKAAEKLIHNDS--SYNHE--YLG----ITGLPSLTSNAAKIIFGTQSDALQED-RVISVQS-LSG 107 (412)
T ss_dssp CCBCTTSCBCCCHHHHHHHHHHHTCT--TCCCC--CCC----TTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-EHH
T ss_pred eeeCCCCCCCCcHHHHHHHHhhhcCc--ccccC--CCC----CCCcHHHHHHHHHHHhcCCCCCCCcc-eEEEEec-cch
Confidence 367777777788889999888 6642 11111 111 11245678888888732 354 7998 8 777
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec-CC-CCCCCHHHHHHHHhh
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL-DD-DGLLDIEALRSKLEL 227 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~-~g~ld~e~L~~al~~ 227 (609)
++++..++..+. .+.+|| .|+++.+.|+++...++..|++++.++. ++ ++.+|+++|++++++
T Consensus 108 ~~a~~~~~~~~~-------------~~~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 172 (412)
T 1yaa_A 108 TGALHISAKFFS-------------KFFPDK--LVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQK 172 (412)
T ss_dssp HHHHHHHHHHHH-------------HHCTTC--CEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred HhHHHHHHHHHH-------------HhCCCC--EEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHh
Confidence 878887754432 136888 5888889999999889999999999998 43 677999999999974
Q ss_pred hccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCcc--------cc-cCCCCCCCC---ccEE
Q 038499 228 YKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV--------EI-DVRSGQTDG---YDAI 292 (609)
Q Consensus 228 ~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~--------~i-d~~~~~~~~---~D~v 292 (609)
. ...++++++++++||||.+.+ +++|+++|++||+++|+|++++.... ++ ++... .. .+++
T Consensus 173 ~--~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 248 (412)
T 1yaa_A 173 A--PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK--LSTVSPVFV 248 (412)
T ss_dssp S--CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH--TTTTCCEEE
T ss_pred C--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc--CCCCcceEE
Confidence 2 013557677999999999976 55789999999999999999753211 11 21111 12 4678
Q ss_pred EEcCCCCCCCCCC--cEEEE--E-----ech----hhccCCCCCCccCCCceEeecccccccccccccccccccCCChh-
Q 038499 293 FLSTHKFLGGPGS--PGILL--M-----TKA----LYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ- 358 (609)
Q Consensus 293 ~~S~hK~lggp~g--~G~L~--~-----~~~----~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~- 358 (609)
+.|+||.+| |.| +|+++ . +++ + ++.+.. ..+....+++
T Consensus 249 ~~s~sK~~~-~~GlriG~~~~~~~~~~~~~~~~~~l--~~~l~~-------------------------~~~~~~~~~~~ 300 (412)
T 1yaa_A 249 CQSFAKNAG-MYGERVGCFHLALTKQAQNKTIKPAV--TSQLAK-------------------------IIRSEVSNPPA 300 (412)
T ss_dssp EEECTTTSC-CGGGCEEEEEEECCSCTTHHHHHHHH--HHHHHH-------------------------HHHTTTSSCCH
T ss_pred EeccCCCCC-CcCCcceEEEEEecCCCCCHHHHHHH--HHHHHH-------------------------HHhhccCCCCh
Confidence 889999998 534 79998 6 444 3 111110 0111122322
Q ss_pred HHHHH-HHHHHHHH-HH--hcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCC
Q 038499 359 VIQMI-RAALAFWV-KE--YIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGEN 431 (609)
Q Consensus 359 i~~~~-~aal~~~~-~~--~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~ 431 (609)
+.+.+ .+++.-.. .+ ..+.+.+.++.+++++++.+.|++++ ++++..+ ..+++.|. .
T Consensus 301 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~--~---------- 364 (412)
T 1yaa_A 301 YGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVN----QCGMFSFT--G---------- 364 (412)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHH----CCSSEEEC--C----------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeecc----CceEEEee--C----------
Confidence 22221 22221110 00 12466778888888999999887653 3555443 23454443 2
Q ss_pred CCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHH
Q 038499 432 TKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEF 511 (609)
Q Consensus 432 ~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eei 511 (609)
++..++...| +++||.+++ ++|||++. .+++|+
T Consensus 365 --------~~~~~~~~~l-~~~gi~v~~-------------------------------------~~Ris~~~-~~~~~i 397 (412)
T 1yaa_A 365 --------LTPQMVKRLE-ETHAVYLVA-------------------------------------SGRASIAG-LNQGNV 397 (412)
T ss_dssp --------CCHHHHHHHH-HHHCEECCT-------------------------------------TSEEEGGG-CCTTTH
T ss_pred --------CCHHHHHHHH-HhCCEEecc-------------------------------------CcEEEEcc-CCHhHH
Confidence 2345664544 557998872 36999984 589999
Q ss_pred HHHHHHHHHHHHh
Q 038499 512 EFTLEALEFIAIY 524 (609)
Q Consensus 512 d~ll~al~~v~~~ 524 (609)
++++++|+.+++.
T Consensus 398 ~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 398 EYVAKAIDEVVRF 410 (412)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 188
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.87 E-value=1.8e-21 Score=208.29 Aligned_cols=331 Identities=15% Similarity=0.042 Sum_probs=212.0
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh-CC-----CCCCcEEE--eCChHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL-GG-----GQEDAMIF--CGSGTTA 151 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~-g~-----~~~~~vif--t~sGtta 151 (609)
|+|.....+.++.+.+++.+.+... ...+. |.. .....++|+.+++++ +. +++ +|++ | +|+++
T Consensus 40 ~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~--y~~----~~g~~~lr~~la~~~~~~~~~~~~~~-~v~~~~t-~gg~~ 110 (412)
T 1ajs_A 40 YRTDDCQPWVLPVVRKVEQRIANNS-SLNHE--YLP----ILGLAEFRTCASRLALGDDSPALQEK-RVGGVQS-LGGTG 110 (412)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHTCT-TCCCC--CCC----TTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-EHHHH
T ss_pred ecCCCCCccccHHHHHHHHHhhhCh-hhccC--CCC----CCCCHHHHHHHHHHHhcCCCCccCCC-cEEEEEC-CCcHH
Confidence 4455444566688889887765220 11111 111 112467888888888 43 455 8988 8 77888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCC-----CceEEEECCCCccchHHHHHHcCce-EEEEecC--CCCCCCHHHHHH
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDE-----ERWVVFVGPHEHHSNLLSWRQSLAE-VVEIGLD--DDGLLDIEALRS 223 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~g-----d~~~Vlv~~~~h~s~~~~~~~~G~~-vv~v~~~--~~g~ld~e~L~~ 223 (609)
++..++..+. .+.+| | .|++..+.|+++...++..|++ ++.++.+ .++.+|+++|++
T Consensus 111 a~~~~~~~~~-------------~~~~g~~~~~d--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~ 175 (412)
T 1ajs_A 111 ALRIGAEFLA-------------RWYNGTNNKDT--PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLS 175 (412)
T ss_dssp HHHHHHHHHH-------------HHSSSSSCCCS--CEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHH
T ss_pred HHHHHHHHHH-------------HhCcCcCCCCC--eEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHH
Confidence 8888765432 13677 7 5888889999998889999999 9999984 456789999999
Q ss_pred HHhhhccCCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC-cc-----cccCCCCC-CCCccEEE
Q 038499 224 KLELYKDAKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV-----EIDVRSGQ-TDGYDAIF 293 (609)
Q Consensus 224 al~~~~~~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~~-----~id~~~~~-~~~~D~v~ 293 (609)
++++. .++++++++++++||||.+.+ +++|+++|++||+++|+|+++... +. ...+.... ....++++
T Consensus 176 ~l~~~--~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 253 (412)
T 1ajs_A 176 DLENA--PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCA 253 (412)
T ss_dssp HHHHS--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEE
T ss_pred HHHhC--CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEE
Confidence 99742 136788889999999999976 457999999999999999996532 21 11111110 01234888
Q ss_pred EcCCCCCCCCC-CcEEEEE---echhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCC-hhHHHHH-HH
Q 038499 294 LSTHKFLGGPG-SPGILLM---TKALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT-PQVIQMI-RA 365 (609)
Q Consensus 294 ~S~hK~lggp~-g~G~L~~---~~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt-p~i~~~~-~a 365 (609)
.|+||.+|+++ .+|++++ ++++.. +..+.. ..+...++ +.+.+.+ .+
T Consensus 254 ~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~a~~~ 308 (412)
T 1ajs_A 254 QSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQK-------------------------IVRVTWSNPPAQGARIVAR 308 (412)
T ss_dssp EECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH-------------------------HHHTTTSSCCSHHHHHHHH
T ss_pred EecccccCCCCcceEEEEEecCCHHHHHHHHHHHHH-------------------------HHhcccCCCChHHHHHHHH
Confidence 99999998532 3899999 665310 111100 01111222 2222221 22
Q ss_pred HHHHHH-HH--hcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 366 ALAFWV-KE--YIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 366 al~~~~-~~--~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
++.... .+ ....+.+.++.+++++++.+.|++++ ++++..+ ..+++.|. .
T Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~--~------------------ 364 (412)
T 1ajs_A 309 TLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITD----QIGMFSFT--G------------------ 364 (412)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH----CCSSEEEC--C------------------
T ss_pred HHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcC----CCceEEEe--C------------------
Confidence 222110 00 12456778888889999999998763 3555433 23454443 2
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
++...+...| +++||.+++ + +||+++. .+++|+++++++|+
T Consensus 365 ~~~~~~~~~l-~~~gv~v~~------------------------------------~-~Ris~~~-~~~~~i~~~~~~l~ 405 (412)
T 1ajs_A 365 LNPKQVEYLI-NQKHIYLLP------------------------------------S-GRINMCG-LTTKNLDYVATSIH 405 (412)
T ss_dssp CCHHHHHHHH-HTTCEECCT------------------------------------T-SEEEGGG-CCTTTHHHHHHHHH
T ss_pred CCHHHHHHHH-HhCCEEecC------------------------------------C-cEEEeee-CCHHHHHHHHHHHH
Confidence 2344555555 457998872 2 4999984 58999999999999
Q ss_pred HHHHh
Q 038499 520 FIAIY 524 (609)
Q Consensus 520 ~v~~~ 524 (609)
++++.
T Consensus 406 ~~l~~ 410 (412)
T 1ajs_A 406 EAVTK 410 (412)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98765
No 189
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.87 E-value=5.9e-22 Score=211.12 Aligned_cols=289 Identities=15% Similarity=0.115 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhCC-----CCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCC--ceEEEECCCCccchHH
Q 038499 124 HEASNYIKKCLGG-----GQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEE--RWVVFVGPHEHHSNLL 196 (609)
Q Consensus 124 ~e~r~~ia~~~g~-----~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~ 196 (609)
.++|+.++++++. .++++|++| +|+++++..++.++ +++|| ...|+++.+.|+.+..
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~l---------------~~~Gd~~~~~Vlv~~P~y~~~~~ 134 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVG-TGSTQLCQAAVHAL---------------SSLARSQPVSVVAAAPFYSTYVE 134 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEE-EHHHHHHHHHHHHH---------------HHTSSSSSEEEEECSSCCTHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEe-CChHHHHHHHHHHh---------------cCCCCCCcceEEEcCCCchhHHH
Confidence 5677777777762 343489998 89999999998877 36777 1149999999999999
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.++..|++++.++++.++ ++ . ++++++++++++||||.+.+ +|++.++.+++++|+|++++.+.
T Consensus 135 ~~~~~g~~~~~~~~d~~~-l~--------~-----~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~ 198 (391)
T 3bwn_A 135 ETTYVRSGMYKWEGDAWG-FD--------K-----KGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH 198 (391)
T ss_dssp HHHTTCBTTEEEEEESTT-CC--------C-----CSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT
T ss_pred HHHHcCCeEEEecCCHHH-cC--------C-----CCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC
Confidence 999999999999887543 21 1 47899999999999999986 55442233349999999987532
Q ss_pred -ccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEE-echhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 277 -VEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLM-TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 277 -~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.++.. ..+.++++.|+||.+|.|+ .+|++++ ++++ ++.+... .....
T Consensus 199 ~~~l~~----~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l--~~~l~~~------------------------~~~~~ 248 (391)
T 3bwn_A 199 YTPITR----RQDHDIMLFTFSKITGHAGSRIGWALVKDKEV--AKKMVEY------------------------IIVNS 248 (391)
T ss_dssp TSCCCC----CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHH--HHHHHHH------------------------HHHHH
T ss_pred CCcccc----CCCCeEEEEechhhcCCCccceEEEEecCHHH--HHHHHHH------------------------hcccc
Confidence 12221 1256899999999998443 3799998 6666 2222110 01111
Q ss_pred CCChhHHHHHH-HHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCC---------CCcceEE
Q 038499 354 GGTPQVIQMIR-AALAFWVK-------EYIGHEVIKKQEETYIERALERLLPNQNIKILGNTST---------KRQAILS 416 (609)
Q Consensus 354 ~gtp~i~~~~~-aal~~~~~-------~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~---------~r~~~~~ 416 (609)
.+++.+.+.+. +++.-... .....+.++++.++.++++.+.|+++|++++..+... +..+.+.
T Consensus 249 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~ 328 (391)
T 3bwn_A 249 IGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFA 328 (391)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEE
T ss_pred cCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEE
Confidence 23334433321 12211000 0234677888889999999999998888887654211 1122233
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 417 FNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
+.-.+ +...+.+.| ++.||.+++|..|.. .++
T Consensus 329 ~~~~~-------------------~~~~~~~~l-~~~gV~v~pg~~fg~----------------------------~~~ 360 (391)
T 3bwn_A 329 WLGTK-------------------EETDLVSEL-RRHKVMSRAGERCGS----------------------------DKK 360 (391)
T ss_dssp EEEES-------------------SSCCHHHHH-HHTTEECEEGGGGTC----------------------------CTT
T ss_pred EecCC-------------------cHHHHHHHH-HHCCEEEccCCCCCC----------------------------CCC
Confidence 33222 113455666 457999999887741 148
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++|||++ ++++++++++++|+++++.
T Consensus 361 ~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 361 HVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp EEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred EEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 9999998 4899999999999876543
No 190
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.87 E-value=5.2e-20 Score=198.80 Aligned_cols=348 Identities=12% Similarity=-0.018 Sum_probs=205.2
Q ss_pred EEecCCCCCC------ChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTASGR------SLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~g~------~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|..++.. .++.|.+++.+.+... .+.. ..........+++++++++++...+++++|+++|+. +
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggse-a 116 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANP-AGAT-----ILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSD-A 116 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-SCSC-----SSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHH-H
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhc-cCcc-----ccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHH-H
Confidence 4888886654 6788999998887653 1111 111234567889999999997655238999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCce--------------EEEEecCCCCCC--
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAE--------------VVEIGLDDDGLL-- 216 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~--------------vv~v~~~~~g~l-- 216 (609)
+..++.++- .+.+++. +|+..+..|..........+.. +..++.+..+..
T Consensus 117 ~~~al~~~~-------------~~~~~~~-vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (439)
T 3dxv_A 117 NEAAYRAIV-------------KATGRSG-VIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPT 182 (439)
T ss_dssp HHHHHHHHH-------------HHHSCCE-EEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTT
T ss_pred HHHHHHHHH-------------HHhCCCE-EEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCccccccc
Confidence 665555421 0123332 5555555555544444333322 233443322222
Q ss_pred ---CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc--ccCCCCCC
Q 038499 217 ---DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE--IDVRSGQT 286 (609)
Q Consensus 217 ---d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~--id~~~~~~ 286 (609)
|+++|++++++ ...+++++++++.++|++|.+.+ +++|.++|++||+++|+|++++. +... ..+... .
T Consensus 183 ~~~d~~~le~~l~~-~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~-~ 260 (439)
T 3dxv_A 183 GDAILTLLTEKLAA-VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHE-G 260 (439)
T ss_dssp SHHHHHHHHHHHHT-SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGT-T
T ss_pred HHHHHHHHHHHHHh-cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhc-C
Confidence 69999999941 11157889999999999999998 99999999999999999999863 1111 111111 1
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHH
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAA 366 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aa 366 (609)
...|++ |++|.+++...+|++++++++ ++.+.+...+ ...+.+.......++
T Consensus 261 ~~~di~--s~sK~~~~G~riG~~~~~~~~--~~~~~~~~~~------------------------~t~~~~~~~~aa~aa 312 (439)
T 3dxv_A 261 FVPDIL--VLGKGLGGGLPLSAVIAPAEI--LDCASAFAMQ------------------------TLHGNPISAAAGLAV 312 (439)
T ss_dssp CCCSEE--EECGGGGTTSCCEEEEEEHHH--HTSCSSSSCC------------------------TTTTCHHHHHHHHHH
T ss_pred CCCCEE--EEcchhcCCcceEEEEECHHH--HhhhcCCCcC------------------------CCcccHHHHHHHHHH
Confidence 135776 556999864468999999988 4444332100 001122222222333
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHhC----CCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCCh
Q 038499 367 LAFWVKEYIGHEVIKKQEETYIERALERLL----PNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHG 442 (609)
Q Consensus 367 l~~~~~~~~g~~~i~~~~~~l~~~~~~~L~----~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 442 (609)
+... +. +.+.++.+++.+++++.|. .++.+....+ ...++.+.+.. .... ........
T Consensus 313 l~~~--~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~~--------~~~~~~~~ 374 (439)
T 3dxv_A 313 LETI--DR---DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRG----RGLACGMELVC-DRQS--------REPARAET 374 (439)
T ss_dssp HHHH--HH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEEEE-ETTT--------TEECHHHH
T ss_pred HHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE----EEEEEEEEEec-Cccc--------cCCCHHHH
Confidence 3332 11 2334444445555555443 3455544322 33455555432 1000 00000135
Q ss_pred HHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 443 PFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 443 ~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
..+.+.|.++ ||.++++.. .++++||++++..|++|+++++++|++++
T Consensus 375 ~~~~~~l~~~-Gv~v~~~~~-------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 422 (439)
T 3dxv_A 375 AKLIYRAYQL-GLVVYYVGM-------------------------------NGNVLEFTPPLTITETDIHKALDLLDRAF 422 (439)
T ss_dssp HHHHHHHHHH-TEECEEEST-------------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CcEEeecCC-------------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 6778888765 999986521 14899999999999999999999999999
Q ss_pred Hhccc
Q 038499 523 IYGQR 527 (609)
Q Consensus 523 ~~~~~ 527 (609)
+...+
T Consensus 423 ~~~~~ 427 (439)
T 3dxv_A 423 SELSA 427 (439)
T ss_dssp HTGGG
T ss_pred HHHhc
Confidence 87655
No 191
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.87 E-value=1.2e-19 Score=194.84 Aligned_cols=329 Identities=14% Similarity=0.044 Sum_probs=203.5
Q ss_pred eEEecCCCCC------CC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChH
Q 038499 78 LTYADHTASG------RS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-QEDAMIFCGSGT 149 (609)
Q Consensus 78 ~vyld~~a~g------~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-~~~~vift~sGt 149 (609)
..|+|+.++. +. ++.|.+++.+.+.... ......+ ......++++.+++++|.+ ++ +|+|+ +|+
T Consensus 42 ~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-~~~~~~~-----~~~~~~~l~~~la~~~~~~~~~-~v~~~-~gg 113 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-HAAANDF-----YNIPQLELAKKLVTYSPGNFQK-KVFFS-NSG 113 (419)
T ss_dssp CEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-CCSCSCS-----CCHHHHHHHHHHHHHSSCSSCE-EEEEE-SSH
T ss_pred CEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-ccccccc-----CCHHHHHHHHHHHHhCCCCcCC-EEEEe-Cch
Confidence 3588886543 34 7889999998886431 1110001 1234567888999999987 55 89998 666
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCcc-chHHHHHHc-------------CceEEEEecCCCCC
Q 038499 150 TAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHH-SNLLSWRQS-------------LAEVVEIGLDDDGL 215 (609)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~-s~~~~~~~~-------------G~~vv~v~~~~~g~ 215 (609)
++++..+++++. ..+++ .|++....|| +........ +.+++.++.+.+..
T Consensus 114 ~ea~~~ai~~~~--------------~~~~~--~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 177 (419)
T 2eo5_A 114 TEAIEASIKVVK--------------NTGRK--YIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYR 177 (419)
T ss_dssp HHHHHHHHHHHH--------------TTSCC--EEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSS
T ss_pred HHHHHHHHHHHH--------------HhhCC--cEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcccc
Confidence 667887776541 01256 4555555444 444333222 23678888765322
Q ss_pred ----------------CCHHHHH-HHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-
Q 038499 216 ----------------LDIEALR-SKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS- 273 (609)
Q Consensus 216 ----------------ld~e~L~-~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~- 273 (609)
+|+++|+ +++++....+++++++++..+|+||.+.+ +++|.++|++||+++|+|++++
T Consensus 178 ~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~ 257 (419)
T 2eo5_A 178 NPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMG 257 (419)
T ss_dssp CTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 4688999 88874211125667777766678998777 9999999999999999999987
Q ss_pred CCcccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 274 GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 274 ~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
.+.... .+... ....|+++ ++|.+|++ .++|++++++++ + .+ ....+ ++
T Consensus 258 ~g~~g~~~~~~~~-~~~~d~~t--~sK~~~~G~~riG~~~~~~~~--~-~~-~~~~~-~t-------------------- 309 (419)
T 2eo5_A 258 LGRTGKLFAIENF-NTVPDVIT--LAKALGGGIMPIGATIFRKDL--D-FK-PGMHS-NT-------------------- 309 (419)
T ss_dssp TTTTSSSSGGGGG-TCCCSEEE--ECGGGGTTTSCCEEEEEEGGG--C-CC--------C--------------------
T ss_pred CccCcchhhHHhc-CCCCCEEE--ecccccCCccceEEEEEchHh--h-cC-CcccC-CC--------------------
Confidence 332211 11111 11457664 55999876 679999999987 4 33 10000 00
Q ss_pred cccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCC
Q 038499 351 RESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGE 430 (609)
Q Consensus 351 r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~ 430 (609)
..+.+.......+++... + .+.++.+++++++.+.|.++ +....+ ...++++.+.+ ..
T Consensus 310 --~~~n~~~~~aa~aal~~~--~-----~~~~~~~~~~~~l~~~L~~~--~~~~~~----~g~~~~i~~~~-~~------ 367 (419)
T 2eo5_A 310 --FGGNALACAIGSKVIDIV--K-----DLLPHVNEIGKIFAEELQGL--ADDVRG----IGLAWGLEYNE-KK------ 367 (419)
T ss_dssp --CCCCHHHHHHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHTTS--SSEEEE----ETTEEEEECSC-HH------
T ss_pred --CCCCHHHHHHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHh--hhheEe----eeEEEEEEEec-Cc------
Confidence 011222222223333322 1 26788888999999999876 211111 23444444322 10
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHH
Q 038499 431 NTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEE 510 (609)
Q Consensus 431 ~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ee 510 (609)
.... +.+.|.+ .||.++++. ++++||++++.+|++|
T Consensus 368 ---------~~~~-~~~~l~~-~Gv~v~~~~---------------------------------~~~lRis~~~~~t~e~ 403 (419)
T 2eo5_A 368 ---------VRDR-IIGESFK-RGLLLLPAG---------------------------------RSAIRVIPPLVISEEE 403 (419)
T ss_dssp ---------HHHH-HHHHHHH-TTEECEEET---------------------------------TTEEEECCCTTCCHHH
T ss_pred ---------cHHH-HHHHHHH-CCCEEecCC---------------------------------CCEEEEECCCCCCHHH
Confidence 0244 7777765 699998531 2789999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 038499 511 FEFTLEALEFIAIY 524 (609)
Q Consensus 511 id~ll~al~~v~~~ 524 (609)
+++++++|+++++.
T Consensus 404 i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 404 AKQGLDILKKVIKV 417 (419)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 192
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.87 E-value=1.1e-21 Score=210.68 Aligned_cols=331 Identities=17% Similarity=0.137 Sum_probs=212.9
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-----CCC--cEEEeCChHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG-----QED--AMIFCGSGTTAA 152 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~-----~~~--~vift~sGttaa 152 (609)
|+|.....+.++.|.+++.+.+... ..+. |.... ...++|+.++++++.. ..+ +|++| +|++++
T Consensus 59 y~d~~~~~~~~~~v~~a~~~~~~~~--~~~~--Y~~~~----g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t-~G~t~a 129 (420)
T 4f4e_A 59 YTNEDGKIPLLRAVRDAEKARVEAG--LPRG--YLPID----GIAAYDASVQKLLLGDDSPLIAAGRVVTAQA-LGGTGA 129 (420)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHTC--CCCC--CCCTT----CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE-EHHHHH
T ss_pred eECCCCCccCcHHHHHHHHHHhccC--CCCC--CCCCC----CcHHHHHHHHHHhcCCCccccccCceEEEEC-CccHHH
Confidence 6777777778899999998877541 1111 11111 1355677777776432 123 68898 788889
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec--CCCCCCCHHHHHHHHhhhcc
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL--DDDGLLDIEALRSKLELYKD 230 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~--~~~g~ld~e~L~~al~~~~~ 230 (609)
+..+++.+. .+++|| .|+++.+.|+++...++..|++++.++. +.++.+|+++|++++++.
T Consensus 130 l~~~~~~~~-------------~~~~gd--~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 192 (420)
T 4f4e_A 130 LKIGADFLR-------------TLNPKA--KVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY-- 192 (420)
T ss_dssp HHHHHHHHH-------------HHCTTC--CEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC--
T ss_pred HHHHHHHHH-------------HhCCCC--EEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC--
Confidence 988865432 147888 5999999999999899999999999998 346789999999999742
Q ss_pred CCCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc-----ccCCCC-CCCCccEEEEcCCCCCC
Q 038499 231 AKRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE-----IDVRSG-QTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~-----id~~~~-~~~~~D~v~~S~hK~lg 301 (609)
.++++++++++++||||.+.+ +++|+++|++||+++|+|++++..... ..+... ...+.++++.|++|.+|
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 272 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFS 272 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCc
Confidence 246889999999999999976 557899999999999999997643321 111100 01245788899999998
Q ss_pred CC-CCcEEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccc-cCCChhHHHHHHH-HHHHH-HHH-
Q 038499 302 GP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE-SGGTPQVIQMIRA-ALAFW-VKE- 373 (609)
Q Consensus 302 gp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~-~~gtp~i~~~~~a-al~~~-~~~- 373 (609)
.| .++|++++ ++++ +..+... +.. ..+. ..+.+.+.+.+.+ .+.-. +.+
T Consensus 273 ~~G~RiG~~~~~~~~~~~--~~~~~~~--------------------~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 329 (420)
T 4f4e_A 273 LYGERVGALSIITDSKDE--AARVLSQ--------------------LKR-VIRTNYSNPPTHGGAIVAAVLASPELRAS 329 (420)
T ss_dssp CGGGCEEEEEEECSSHHH--HHHHHHH--------------------HHH-HHHTTTSSCCSHHHHHHHHHHHCHHHHHH
T ss_pred CcCCCcEEEEEEcCCHHH--HHHHHHH--------------------HHH-HHhcccCCCCHHHHHHHHHHhcCHHHHHH
Confidence 33 34899875 2232 1110000 000 0001 1122333332221 11110 000
Q ss_pred -hcCHHHHHHHHHHHHHHHHHHhCCC---CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHH
Q 038499 374 -YIGHEVIKKQEETYIERALERLLPN---QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLL 449 (609)
Q Consensus 374 -~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 449 (609)
....+.++++.+++++++.+.|+++ +++.+..+ ..++++|.- ++...+.+.|
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~~~--------------------~~~~~~~~~l 385 (420)
T 4f4e_A 330 WVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINA----QRGMFSYSG--------------------LTSAQVDRLR 385 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH----SCSSEEECC--------------------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECC----CccEEEEeC--------------------CCHHHHHHHH
Confidence 1235677788888899999998876 35555433 234554432 2455666666
Q ss_pred hhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 450 NDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 450 ~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
+++||.+++| + |+|++. .+++++++++++|++++
T Consensus 386 -~~~gI~v~~~-----------------------------------~--Ris~~~-~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 386 -EEFGIYAVST-----------------------------------G--RICVAA-LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp -HHHCEECCTT-----------------------------------S--EEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred -HhCCEEecCC-----------------------------------C--eEEEec-CCHHHHHHHHHHHHHHh
Confidence 4569988731 2 999974 36677999999999875
No 193
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.87 E-value=4.2e-19 Score=192.00 Aligned_cols=334 Identities=17% Similarity=0.128 Sum_probs=207.1
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |-.++.|.+++.+.+... .+.+.. + ......++++.+++++|. ++|+|+++|+. +
T Consensus 77 ~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~g~---~~v~~~~sGse-A 145 (439)
T 2oat_A 77 KYFDFLSSYSAVNQGHCHPKIVNALKSQVDKL-TLTSRA-F-----YNNVLGEYEEYITKLFNY---HKVLPMNTGVE-A 145 (439)
T ss_dssp EEEESSGGGGTTTTCBTCHHHHHHHHHHHTTC-SCCCTT-S-----EESSHHHHHHHHHHHHTC---SEEEEESSHHH-H
T ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHHhc-CcccCc-c-----CCHHHHHHHHHHHHhcCC---CEEEEeCCHHH-H
Confidence 58887662 226788999998888653 111111 1 123467788899999974 38999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccc-hHHHHHHcC------------ceEEEEecCCCCCCCH
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHS-NLLSWRQSL------------AEVVEIGLDDDGLLDI 218 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s-~~~~~~~~G------------~~vv~v~~~~~g~ld~ 218 (609)
+..++.++.. .. .-...+.+| + .|++.+..||+ ....+...| .+++.++.+ |+
T Consensus 146 ~~~al~~~~~-~~-----~~~~g~~~g~~--~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~ 212 (439)
T 2oat_A 146 GETACKLARK-WG-----YTVKGIQKYKA--KIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DL 212 (439)
T ss_dssp HHHHHHHHHH-HH-----HHTTCCCTTCC--EEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CH
T ss_pred HHHHHHHHHH-Hh-----hhccCCCCCCC--eEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC-----CH
Confidence 6666554310 00 000001345 4 45555555554 444444444 467777653 89
Q ss_pred HHHHHHHhhhccCCCceEEEEecccCcccccc----CHHHHHHHHHHhCCeEEEeccccC-Ccccc--cCCCCCCCCccE
Q 038499 219 EALRSKLELYKDAKRPILGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAASG-PYVEI--DVRSGQTDGYDA 291 (609)
Q Consensus 219 e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~----dl~~I~~la~~~g~~vivD~A~~~-~~~~i--d~~~~~~~~~D~ 291 (609)
++|+++++. +++++++++.+++++|.+. ++++|.++|++||+++|+|+++.. +.... .+.... -..|+
T Consensus 213 ~~le~~l~~----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~-~~~Di 287 (439)
T 2oat_A 213 PALERALQD----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYEN-VRPDI 287 (439)
T ss_dssp HHHHHHTTS----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSE
T ss_pred HHHHHHhCC----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhC-CCCcE
Confidence 999999952 5788888888888899876 699999999999999999999853 21111 111110 14587
Q ss_pred EEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHH
Q 038499 292 IFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFW 370 (609)
Q Consensus 292 v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~ 370 (609)
+ +++|.++|. ..+|++++++++ ++.+.+...++ + ..+.|.......++++..
T Consensus 288 ~--t~sK~l~~G~~~~G~v~~~~~~--~~~l~~~~~~~-t----------------------~~~~~~~~aaa~aal~~~ 340 (439)
T 2oat_A 288 V--LLGKALSGGLYPVSAVLCDDDI--MLTIKPGEHGS-T----------------------YGGNPLGCRVAIAALEVL 340 (439)
T ss_dssp E--EECGGGGTTSSCCEEEEECHHH--HTTSCTTSSCC-S----------------------STTCHHHHHHHHHHHHHH
T ss_pred E--EecccccCCCCCeEEEEECHHH--HhccCCCCccc-C----------------------CCcCHHHHHHHHHHHHHH
Confidence 6 566999864 358999999988 44543321110 0 022332222233444433
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHh
Q 038499 371 VKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLN 450 (609)
Q Consensus 371 ~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 450 (609)
+. +.+.++.+++.+++.+.|+++ ++.++... .....++++.+.. .. ..+...+.+.|.
T Consensus 341 --~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~-~~~g~~~~v~l~~-~~--------------~~~~~~l~~~l~ 398 (439)
T 2oat_A 341 --EE---ENLAENADKLGIILRNELMKL-PSDVVTAV-RGKGLLNAIVIKE-TK--------------DWDAWKVCLRLR 398 (439)
T ss_dssp --HH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEE-EEETTEEEEEECC-CS--------------SCCHHHHHHHHH
T ss_pred --hh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEE-EeeeeEEEEEEec-Cc--------------cHHHHHHHHHHH
Confidence 21 245678888899999999876 22211100 0133455555443 10 024668888887
Q ss_pred hhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 451 DLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 451 ~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+ .||.++++ .++++|+++++.+|++|+++++++|+++++.
T Consensus 399 ~-~Gv~v~~~---------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 399 D-NGLLAKPT---------------------------------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp H-TTEECCBS---------------------------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred H-CCeEEecC---------------------------------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 6 59998842 1378999999999999999999999988753
No 194
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.86 E-value=1.5e-21 Score=212.44 Aligned_cols=358 Identities=13% Similarity=0.072 Sum_probs=207.6
Q ss_pred eEEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 038499 78 LTYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQ 157 (609)
Q Consensus 78 ~vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (609)
..|+|+.+..+. +.|.+++.+.+.. +.. .+.. .....++++++++++|. ++++||++|+ +++..++
T Consensus 41 ~~ylD~~~~~~~-~~v~~a~~~~l~~--~~~---~y~~----~~~~~~l~~~la~~~~~---~~v~~t~~gt-~A~~~al 106 (467)
T 2oqx_A 41 DVFIDLLTDSGT-GAVTQSMQAAMMR--GDE---AYSG----SRSYYALAESVKNIFGY---QYTIPTHQGR-GAEQIYI 106 (467)
T ss_dssp GCSEECSCCSSC-SCCCHHHHHHTTS--CCC---CSSS----CHHHHHHHHHHHHHHCC---SEEEEEC--C-CSHHHHH
T ss_pred CeeEecccCCCc-HHHHHHHHHHhcc--Ccc---eecc----CchhHHHHHHHHHHhCc---CcEEEcCCcH-HHHHHHH
Confidence 359999877766 6777777776542 111 1111 12356789999999987 3789996565 4566666
Q ss_pred HHhcccchhhHHHHHHhhhcC-----C----CceEEEECCCCccch-HHHHHHcCceEEEE------ecC----CCCCCC
Q 038499 158 EVMGIAVPSILREKLIKCLRD-----E----ERWVVFVGPHEHHSN-LLSWRQSLAEVVEI------GLD----DDGLLD 217 (609)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~-----g----d~~~Vlv~~~~h~s~-~~~~~~~G~~vv~v------~~~----~~g~ld 217 (609)
.++. ++ | |. |+++ ..|+.. ...+...|+.++.. +.+ .++.+|
T Consensus 107 ~~~~---------------~~~~~~~G~~~~d~--Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 168 (467)
T 2oqx_A 107 PVLI---------------KKREQEKGLDRSKM--VAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFD 168 (467)
T ss_dssp HHHH---------------HHHHHHHCCCTTTC--EEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBC
T ss_pred HHHh---------------ccccccCCCCccce--EEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcC
Confidence 5542 34 6 64 6666 456443 33344456666543 222 346789
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCcc-ccccC---HHHHHHHHHHhCCeEEEeccccC-----------CcccccCC
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVT-GIYSD---TRSIARLLHQYGGFACFDFAASG-----------PYVEIDVR 282 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~T-G~~~d---l~~I~~la~~~g~~vivD~A~~~-----------~~~~id~~ 282 (609)
+++|+++|++.. .+++++|++++++|+| |.+.+ +++|.++|++||+++|+|++++. ++...+..
T Consensus 169 ~~~Le~~i~~~~-~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~ 247 (467)
T 2oqx_A 169 LEGLERGIEEVG-PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE 247 (467)
T ss_dssp HHHHHHHHHHHC-GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH
T ss_pred HHHHHHHHHhcC-CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH
Confidence 999999998421 1268999999999998 77755 67899999999999999987655 22222221
Q ss_pred CCC---CCCccEEEEcCCCCCCCCCCcEEEEEech-hhc-cCCCCCCc-cCCCceEeecccccccccccccccccccCCC
Q 038499 283 SGQ---TDGYDAIFLSTHKFLGGPGSPGILLMTKA-LYQ-LGSFPPST-CGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 283 ~~~---~~~~D~v~~S~hK~lggp~g~G~L~~~~~-~~~-l~~~~p~~-~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
.+. ...+|++++|+||++|.|.| |+++.+++ +.. +..+.+.. .+++. ...++
T Consensus 248 ~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~ 305 (467)
T 2oqx_A 248 QITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECRTLCVVQEGF---------------------PTYGG 305 (467)
T ss_dssp HHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHHHHHHHHTTSS---------------------CCCCC
T ss_pred HHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHHHHhhhccCCc---------------------ccccc
Confidence 110 01468889999999987755 78888766 311 11221111 01110 01122
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEec---cCCCCCcCCCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIH---SSTINSSLGENTK 433 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~---~~~~~~~~~~~~~ 433 (609)
.+...+. ++...+.+....+ ..++..++++++.+.|.++ ++.+. +. +..++++.+. + ..
T Consensus 306 ~~~~~~~--al~~~l~~~~~~~-~~~~~~~~~~~l~~~L~~~-~~~~~-~~---~~~~~~~~~~~~~~-~~--------- 367 (467)
T 2oqx_A 306 LEGGAME--RLAVGLYDGMNLD-WLAYRIAQVQYLVDGLEEI-GVVCQ-QA---GGHAAFVDAGKLLP-HI--------- 367 (467)
T ss_dssp CCHHHHH--HHHHHHHHTTCHH-HHHHHHHHHHHHHHHHHHT-TCCEE-EE---CSSCEEEEHHHHST-TS---------
T ss_pred hhhhHHH--HHHHhhHhhhhHH-HHHHHHHHHHHHHHHHHHC-CCeee-cC---CceEEEEechhhcc-cC---------
Confidence 2222221 2222212222212 2334456778888888776 67666 42 3344555442 1 10
Q ss_pred CCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCC-CCHHHHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYY-MSNEEFE 512 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~-~t~eeid 512 (609)
....++...+++.|.++.||.++++..|....... .+.+. ....+++|++++.. +|++|++
T Consensus 368 --~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~-~g~~~---------------~~~~~~iRl~~~~~~~t~e~i~ 429 (467)
T 2oqx_A 368 --PADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK-TGKQL---------------PCPAELLRLTIPRATYTQTHMD 429 (467)
T ss_dssp --CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT-TCSBC---------------CCSCCEEEECCCTTTSCHHHHH
T ss_pred --CcccccHHHHHHHHHHhcCceeccccccccccccc-ccccc---------------cCccCeEEEEecCCCCCHHHHH
Confidence 00001144567777344699998754332000000 00000 00137999999998 9999999
Q ss_pred HHHHHHHHHHHhcc
Q 038499 513 FTLEALEFIAIYGQ 526 (609)
Q Consensus 513 ~ll~al~~v~~~~~ 526 (609)
+++++|+++++...
T Consensus 430 ~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 430 FIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999987654
No 195
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.86 E-value=1.5e-21 Score=207.52 Aligned_cols=327 Identities=16% Similarity=0.140 Sum_probs=207.5
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCC------CCCCcEEE--eCChHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGG------GQEDAMIF--CGSGTTA 151 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~------~~~~~vif--t~sGtta 151 (609)
|+|.....+.++.+.+++.+.+... ..+. |.. .....++|+.++++++. +++ +|++ | +|+++
T Consensus 36 ~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~--y~~----~~g~~~lr~~la~~~~~~~~~~~~~~-~v~~~~~-~g~~~ 105 (396)
T 2q7w_A 36 YKDETGKTPVLTSVKKAEQYLLENE--TTKN--YLG----IDGIPEFGRCTQELLFGKGSALINDK-RARTAQT-PGGTG 105 (396)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHHC--CCCC--CCC----TTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-SHHHH
T ss_pred ccCCCCCccCcHHHHHHHHhhcCcc--cccC--CCC----CCCCHHHHHHHHHHHhcCCCCccccc-cEEEEec-ccchh
Confidence 5555555567788888887765321 1111 111 11246688888888732 244 7887 8 78888
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CCCCCCHHHHHHHHhhhc
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DDGLLDIEALRSKLELYK 229 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~~ 229 (609)
++..++.++. .+.+|| .|++..+.|+++...++..|++++.++.+ +++.+|+++|++++++.
T Consensus 106 a~~~~~~~~~-------------~~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 169 (396)
T 2q7w_A 106 ALRVAADFLA-------------KNTSVK--RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA- 169 (396)
T ss_dssp HHHHHHHHHH-------------HHSCCC--EEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC-
T ss_pred hHHHHHHHHH-------------HhCCCC--EEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC-
Confidence 8988876653 135888 68899999999998999999999999985 46778999999999742
Q ss_pred cCCCceEEEEecccCccccccCH---HHHHHHHHHhCCeEEEeccccCCccc-----ccCCCCC-CCCccEEEEcCCCCC
Q 038499 230 DAKRPILGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVE-----IDVRSGQ-TDGYDAIFLSTHKFL 300 (609)
Q Consensus 230 ~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la~~~g~~vivD~A~~~~~~~-----id~~~~~-~~~~D~v~~S~hK~l 300 (609)
.++++++++++++||||.+.+. ++|+++|++||+++|+|++++..... ..+..+. ....++++.|+||.+
T Consensus 170 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 248 (396)
T 2q7w_A 170 -QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 248 (396)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTT
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccc
Confidence 1247889999999999999874 57999999999999999997753211 1121110 013457889999999
Q ss_pred CCC-CCcEEEEE---echhhc--cCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHH--HHHHHHH-H
Q 038499 301 GGP-GSPGILLM---TKALYQ--LGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMI--RAALAFW-V 371 (609)
Q Consensus 301 ggp-~g~G~L~~---~~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~--~aal~~~-~ 371 (609)
|.| ..+|++++ +++... +..+.. ..+...++++..... .+++.-. +
T Consensus 249 ~~~G~riG~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~a~~~~l~~~~l 303 (396)
T 2q7w_A 249 GLYNERVGACTLVAADSETVDRAFSQMKA-------------------------AIRANYSNPPAHGASVVATILSNDAL 303 (396)
T ss_dssp TCGGGCCEEEEEECSSHHHHHHHHHHHHH-------------------------HHHTTTSSCCHHHHHHHHHHHTSHHH
T ss_pred cccccccceEEEEcCCHHHHHHHHHHHHH-------------------------HHhhccCCCCcHHHHHHHHHhcChhh
Confidence 732 23799997 443200 111100 011112232332221 1111110 0
Q ss_pred HH--hcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHH
Q 038499 372 KE--YIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVA 446 (609)
Q Consensus 372 ~~--~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 446 (609)
.+ ..+.+.+.++.+++++++.+.|+++. ++++..+ ..+++.|. . ++...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~--~------------------~~~~~~~ 359 (396)
T 2q7w_A 304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIK----QNGMFSFS--G------------------LTKEQVL 359 (396)
T ss_dssp HHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHH----CCSSEEEC--C------------------CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecC----CCceEEEe--c------------------CCHHHHH
Confidence 00 12355667778888888888887763 2554432 23455443 2 2345565
Q ss_pred HHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 447 TLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 447 ~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
+.| ++.||.+++ + +||+++.. +++|+++++++|+++
T Consensus 360 ~~l-~~~gv~v~~------------------------------------~-~Ris~~~~-~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 360 RLR-EEFGVYAVA------------------------------------S-GRVNVAGM-TPDNMAPLCEAIVAV 395 (396)
T ss_dssp HHH-HHHCEECCT------------------------------------T-CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred HHH-HhcCeeecC------------------------------------C-ceEEEeec-CHHHHHHHHHHHHhc
Confidence 656 456998872 2 59999854 899999999999875
No 196
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.86 E-value=1e-21 Score=208.83 Aligned_cols=329 Identities=17% Similarity=0.109 Sum_probs=207.1
Q ss_pred EecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh-CC--CCCCcEEE--eCChHHHHHH
Q 038499 80 YADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL-GG--GQEDAMIF--CGSGTTAAIK 154 (609)
Q Consensus 80 yld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~-g~--~~~~~vif--t~sGttaal~ 154 (609)
|+|.....+.++.+.+++.+.+... ..+. |.. .....++|+.+++++ +. +++ +|+| | +|+++++.
T Consensus 36 ~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~--y~~----~~g~~~lr~~la~~~~~~~~~~~-~v~~~~~-~g~~~a~~ 105 (394)
T 2ay1_A 36 YKDATGHTPIMRAVHAAEQRMLETE--TTKT--YAG----LSGEPEFQKAMGELILGDGLKSE-TTATLAT-VGGTGALR 105 (394)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHHC--CCCC--CCC----SSCCHHHHHHHHHHHHGGGCCGG-GEEEEEE-EHHHHHHH
T ss_pred eeCCCCCccCcHHHHHHHHHhcCCc--ccCC--CCC----CCCcHHHHHHHHHHHhCCCCCcc-cEEEEec-CCchhHHH
Confidence 3444444466788888887765320 1111 111 111456788888886 54 454 8888 8 78888888
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEecC--CCCCCCHHHHHHHHhhhccCC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLD--DDGLLDIEALRSKLELYKDAK 232 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~~~~~ 232 (609)
.++..+. .+.+|| .|++..+.|+++...++..|++++.++.+ .++.+|+++|++++++. .+
T Consensus 106 ~~~~~~~-------------~~~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~ 168 (394)
T 2ay1_A 106 QALELAR-------------MANPDL--RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA--KK 168 (394)
T ss_dssp HHHHHHH-------------HHCTTC--CEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC--CT
T ss_pred HHHHHHH-------------hcCCCC--EEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC--CC
Confidence 8877653 124788 58888899999988888899999999985 46778999999999742 12
Q ss_pred CceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCCccc-----ccCCCCCC-CCccEEEEcCCCCCCCC
Q 038499 233 RPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVE-----IDVRSGQT-DGYDAIFLSTHKFLGGP 303 (609)
Q Consensus 233 ~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~~~~-----id~~~~~~-~~~D~v~~S~hK~lggp 303 (609)
+++++++++++||||.+.| +++|+++|++||+++|+|++++..... ..+..+.. ...++++.|+||++|.|
T Consensus 169 ~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 248 (394)
T 2ay1_A 169 GDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIY 248 (394)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCc
Confidence 4678888999999999987 457899999999999999998753221 11111100 12246788999999732
Q ss_pred -CCcEEEEE---echhhccCCCCCCccCCCceEeecccccccccccccccccccCCC-hhHHHHH-HHHHHHH-HHH--h
Q 038499 304 -GSPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT-PQVIQMI-RAALAFW-VKE--Y 374 (609)
Q Consensus 304 -~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt-p~i~~~~-~aal~~~-~~~--~ 374 (609)
.++|++++ ++++. +.+... +.. ..+...++ +.+.+.+ .+++... +.+ .
T Consensus 249 G~riG~~~~~~~~~~~~--~~l~~~--------------------~~~-~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~ 305 (394)
T 2ay1_A 249 RERTGCLLALCADAATR--ELAQGA--------------------MAF-LNRQTYSFPPFHGAKIVSTVLTTPELRADWM 305 (394)
T ss_dssp GGCEEEEEEECSSHHHH--HHHHHH--------------------HHH-HHHTTTSSCCCHHHHHHHHHHHSHHHHHHHH
T ss_pred CCccceEEEEeCCHHHH--HHHHHH--------------------HHH-HHhhhcCCCChHHHHHHHHHhcChHHHHHHH
Confidence 23699998 55431 111000 000 00111122 2222221 2222110 000 1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 375 IGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 375 ~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
.+.+.+.++.+++++++.+.|+++. ++++..+ ..+++.+. . ++...+.+.| +
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~~--~------------------~~~~~~~~~l-~ 360 (394)
T 2ay1_A 306 AELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAE----HRGMFSRL--G------------------ATPEQVKRIK-E 360 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHH----CCSSEEEC--C------------------CCHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcC----CceEEEee--C------------------CCHHHHHHHH-H
Confidence 2456777888888888888887652 3444432 23455443 2 2345666666 4
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
++||.+++ + +||+++ +++++|+++++++|+++
T Consensus 361 ~~gi~v~~------------------------------------~-~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 361 EFGIYMVG------------------------------------D-SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp HHCEECCT------------------------------------T-CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred hCCEEecC------------------------------------C-CeEEee-cCCHhhHHHHHHHHHHc
Confidence 56998872 2 599998 47999999999999876
No 197
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.86 E-value=5.3e-19 Score=190.84 Aligned_cols=332 Identities=16% Similarity=0.168 Sum_probs=198.9
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
..|+|..++ |..++.|.+++.+.+... .+.... + ......++++.+++++|. ++|+|+++|+.
T Consensus 65 ~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~g~---~~v~~~~sGse- 133 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGHCHPNILNAMINQAKNL-TICSRA-F-----FSVPLGICERYLTNLLGY---DKVLMMNTGAE- 133 (433)
T ss_dssp CEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTC-SCCCTT-S-----EEHHHHHHHHHHHHHHTC---SEEEEESSHHH-
T ss_pred CEEEEcccchhhcccCCCCHHHHHHHHHHHHhC-CCccCC-c-----CCHHHHHHHHHHHhhcCC---CeEEEeCCHHH-
Confidence 358887651 226788999998888653 221111 1 234567888999999974 38999955555
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHH-HHHHcC------------ceEEEEecCCCCCCC
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLL-SWRQSL------------AEVVEIGLDDDGLLD 217 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~-~~~~~G------------~~vv~v~~~~~g~ld 217 (609)
++..++.++.. .. .-...+.+| + .|++.+..||+... .+...| ..++.++.+ |
T Consensus 134 A~~~al~~a~~-~~-----~~~~g~~~gr~--~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d 200 (433)
T 1z7d_A 134 ANETAYKLCRK-WG-----YEVKKIPENMA--KIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----D 200 (433)
T ss_dssp HHHHHHHHHHH-HH-----HHTSCCCTTCC--EEEEETTC--------------------------CEEEECTT-----C
T ss_pred HHHHHHHHHHH-Hh-----hhccCCCCCCC--eEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-----C
Confidence 66666554310 00 000001356 5 56666666665433 333333 355666643 8
Q ss_pred HHHHHHHHhhhccCCCceEEEEecccCcccccc----CHHHHHHHHHHhCCeEEEeccccC-Ccccc--cCCCCCCCCcc
Q 038499 218 IEALRSKLELYKDAKRPILGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAASG-PYVEI--DVRSGQTDGYD 290 (609)
Q Consensus 218 ~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~----dl~~I~~la~~~g~~vivD~A~~~-~~~~i--d~~~~~~~~~D 290 (609)
+++|+++++. +++++++++.++|+||.+. ++++|.++|++||+++|+|++++. +.... .+... ....|
T Consensus 201 ~~~le~~l~~----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~-~~~~d 275 (433)
T 1z7d_A 201 LEALEEELKD----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHY-NVKPD 275 (433)
T ss_dssp HHHHHHHHTS----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGG-TCCCS
T ss_pred HHHHHHHhCC----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhc-CCCCC
Confidence 9999999952 5788988888888899876 689999999999999999999863 21111 11111 01468
Q ss_pred EEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHH
Q 038499 291 AIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAF 369 (609)
Q Consensus 291 ~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~ 369 (609)
++ +++|++|+. ..+|++++++++ ++.+.+...++ + ..+.|.......++++.
T Consensus 276 i~--t~sK~l~~G~~~~G~v~~~~~~--~~~l~~~~~~~-t----------------------~~~~~~~~aaa~aal~~ 328 (433)
T 1z7d_A 276 VI--LLGKALSGGHYPISAVLANDDI--MLVIKPGEHGS-T----------------------YGGNPLAASICVEALNV 328 (433)
T ss_dssp EE--EECGGGGTTSSCCEEEEECHHH--HTTCCTTCCCC-T----------------------TTTCHHHHHHHHHHHHH
T ss_pred EE--EECccccCCCCCeEEEEECHHH--Hhhhccccccc-c----------------------CCCCHHHHHHHHHHHHH
Confidence 77 556999864 358999999988 44543321110 0 02233222223344443
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHH
Q 038499 370 WVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFV 445 (609)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v 445 (609)
. +. +.+.++.+++.+++.+.|++ +|.+....+ ...++++.+.. .. .+...+
T Consensus 329 ~--~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~----~g~~~~i~~~~-~~---------------~~~~~~ 383 (433)
T 1z7d_A 329 L--IN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRG----KGLLCAIEFKN-EL---------------VNVLDI 383 (433)
T ss_dssp H--HH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE----ETTEEEEEECT-TT---------------CCHHHH
T ss_pred H--Hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----eeeEEEEEEcc-Ch---------------hHHHHH
Confidence 3 21 23455666677777766653 343332211 23455555543 10 146678
Q ss_pred HHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 446 ATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 446 ~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.+.|.+ .||.++++ .++++|+++++.+|++|+++++++|+++++.
T Consensus 384 ~~~l~~-~Gv~v~~~---------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 384 CLKLKE-NGLITRDV---------------------------------HDKTIRLTPPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp HHHHHH-TTEECCEE---------------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCeEEecC---------------------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 888876 59998842 0378999999999999999999999998765
No 198
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.86 E-value=1.7e-20 Score=201.96 Aligned_cols=376 Identities=13% Similarity=0.061 Sum_probs=201.0
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ -|+|..++ |..++.|.+++.+.+... ...+. .........+++++++++++.+
T Consensus 18 ~~G~~~~d~~g~---~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~-----~~~~~~~~~~l~~~la~~~~~~ 88 (430)
T 3i4j_A 18 GEGVFLYDDAGR---RYLDGSSGALVANIGHGRAEVGERMAAQAARL-PFVHG-----SQFSSDVLEEYAGRLARFVGLP 88 (430)
T ss_dssp EEBTEEEETTSC---EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-CCCCT-----TTCEEHHHHHHHHHHHHHTTCT
T ss_pred eecCEEEECCCC---EEEECCCchhccccCCCCHHHHHHHHHHHHhc-ccccc-----cccCCHHHHHHHHHHHHhCCCC
Confidence 444555444453 38888764 334788999998877542 11111 1112355778889999999987
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCc--------------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLA-------------- 203 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------- 203 (609)
.+ +|+|+ +|+++++..++.++... ++. ..-..++ .|++.+..||.........+.
T Consensus 89 ~~-~v~~~-~gg~ea~~~al~~~~~~----~~~---~g~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 157 (430)
T 3i4j_A 89 TF-RFWAV-SGGSEATESAVKLARQY----HVE---RGEPGRF--KVITRVPSYHGASLGSLAASGMGARRELYTPLMRP 157 (430)
T ss_dssp TC-EEEEE-SSHHHHHHHHHHHHHHH----HHH---TTCTTCC--EEEEETTC-------------------------CG
T ss_pred CC-EEEEe-CcHHHHHHHHHHHHHHH----HHh---cCCCCCc--EEEEEeCCcCCCCcccccccCccccccccCCcCCC
Confidence 76 89999 55555666666554100 000 0001233 577766677665433322221
Q ss_pred -eEEEEecCCC---CCCCHHHHHHHHhhhccCCCceEEEEecccC-ccccccC----HHHHHHHHHHhCCeEEEeccccC
Q 038499 204 -EVVEIGLDDD---GLLDIEALRSKLELYKDAKRPILGSFSACSN-VTGIYSD----TRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 204 -~vv~v~~~~~---g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn-~TG~~~d----l~~I~~la~~~g~~vivD~A~~~ 274 (609)
.+..++.+.. +..|+++|+++|++.. .+++++++++.++| ++|.+.+ +++|.++|++||+++|+|++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~ 236 (430)
T 3i4j_A 158 EAWPKLPKPDPARNGAEDAEGLRALLEREG-PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSG 236 (430)
T ss_dssp GGSCEECCCCTTSCHHHHHTHHHHHHHHHC-GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCceEcCCCcccchhhHHHHHHHHHHHhcC-CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 3444544332 3347789999997421 12467778888888 9999887 89999999999999999999873
Q ss_pred -Cccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccc
Q 038499 275 -PYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEE 350 (609)
Q Consensus 275 -~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (609)
+... ..+........|++++| |.+++. ..+|++++++++. +.+.+.. +. + ..
T Consensus 237 ~~~~g~~~~~~~~~~~~~di~t~s--K~l~~G~~r~G~~~~~~~i~--~~~~~~~---~~-------------~----~~ 292 (430)
T 3i4j_A 237 MGRCGSPLALSRWSGVTPDIAVLG--KGLAAGYAPLAGLLAAPQVY--ETVMGGS---GA-------------F----MH 292 (430)
T ss_dssp TTTTSSSSGGGGTTTCCCSEEEEC--GGGTTTSSCCEEEEECHHHH--HHHHHTT---CB-------------C----CC
T ss_pred CCcccchhhhhhhcCCCCcEEEEc--ccccCCccccEEEEECHHHH--HHHhccC---Cc-------------c----cc
Confidence 2221 11111101135777654 999864 4589999998873 2221100 00 0 00
Q ss_pred ccc-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCC
Q 038499 351 RES-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLG 429 (609)
Q Consensus 351 r~~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~ 429 (609)
... .+.+.......+++.... +..-.+.+.+....+++.+.+.+..+|++....+ ...++.+.+.. .....
T Consensus 293 ~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~-- 364 (430)
T 3i4j_A 293 GFTYAGHPVSVAAGLSVLDIVE-REDLTGAAKERGAQLLAGLQALQARFPQMMQVRG----TGLLLGVVLGD-LATGQ-- 364 (430)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEEC---------
T ss_pred cCCCCCCHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE----EEEEEEEEecc-ccccC--
Confidence 000 112222222233333321 1111334444444444555554445566655433 23455554432 11000
Q ss_pred CCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 430 ENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 430 ~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
..........+.+.|.+ .||.++++..+..+ . .++++||++++..|++
T Consensus 365 -----~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~-------~-------------------~~~~iRi~~~~~~t~e 412 (430)
T 3i4j_A 365 -----AFETPGIASRIGAAALK-RGLITYPGSGAEPN-------G-------------------RGDHLLLGPPLSITAA 412 (430)
T ss_dssp -----------CHHHHHHHHHH-TTEECC-------------------------------------CEEEECCCTTCCHH
T ss_pred -----CCccHHHHHHHHHHHHh-CCCEEEecccccCC-------C-------------------CCCEEEEECCCCCCHH
Confidence 00000123678888876 59999976322211 0 1478999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 038499 510 EFEFTLEALEFIAIY 524 (609)
Q Consensus 510 eid~ll~al~~v~~~ 524 (609)
|+++++++|+++++.
T Consensus 413 ~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 413 EVDGLLALLAGALED 427 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 199
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.85 E-value=4e-19 Score=192.71 Aligned_cols=367 Identities=11% Similarity=0.098 Sum_probs=208.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ -|+|..++ |..++.|.+++.+.+.... . .. .........+++++++++++.+
T Consensus 38 ~~G~~v~d~~g~---~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~-~~-----~~~~~~~~~~la~~l~~~~~~~ 107 (452)
T 3n5m_A 38 AEGCWVEDIQGK---RYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS-Y-FP-----MSQSHEPAIKLAEKLNEWLGGE 107 (452)
T ss_dssp EEBTEEEETTCC---EEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC-C-CC-----TTSEEHHHHHHHHHHHHHHTSC
T ss_pred eeeCEEEECCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhcC-C-cc-----cccCCHHHHHHHHHHHHhCCCC
Confidence 344455444453 38887655 4567899999998886431 1 11 1112456778899999999876
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhc---CCCceEEEECCCCccchHHHHHHc-C-----------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLR---DEERWVVFVGPHEHHSNLLSWRQS-L----------- 202 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~---~gd~~~Vlv~~~~h~s~~~~~~~~-G----------- 202 (609)
.+ |+||++|+. ++..++.++-.. . ... +++ .|++....||......... |
T Consensus 108 ~~--v~~~~ggse-A~~~al~~~~~~-------~---~~~g~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 172 (452)
T 3n5m_A 108 YV--IFFSNSGSE-ANETAFKIARQY-------Y---AQKGEPHRY--KFMSRYRGYHGNTMATMAATGQAQRRYQYEPF 172 (452)
T ss_dssp EE--EEEESSHHH-HHHHHHHHHHHH-------H---HTTTCTTCC--EEEEETTCCCCSSHHHHHSCCCGGGTTTTCCC
T ss_pred ce--EEEeCchHH-HHHHHHHHHHHH-------H---HhcCCCCCC--EEEEECCCcCCCCHHHHhcCCchhhccccCCC
Confidence 43 889855555 566655543100 0 002 344 5666666666544333222 1
Q ss_pred -ceEEEEecCCCCC---CC---------HHHHHHHHhhhccCCCceEEEEecc-cCccccccC----HHHHHHHHHHhCC
Q 038499 203 -AEVVEIGLDDDGL---LD---------IEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSD----TRSIARLLHQYGG 264 (609)
Q Consensus 203 -~~vv~v~~~~~g~---ld---------~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~d----l~~I~~la~~~g~ 264 (609)
..+..++...... -| +++|++++++. ..+++++++++.+ +| ||.+.| +++|.++|++||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~ 250 (452)
T 3n5m_A 173 ASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE-LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGA 250 (452)
T ss_dssp CSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH-CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTC
T ss_pred CCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc-CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCC
Confidence 1244554321111 12 89999999721 1146788888888 89 999887 9999999999999
Q ss_pred eEEEeccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccc
Q 038499 265 FACFDFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 265 ~vivD~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
++|+|++++. +... ...... .-..|++++| |.++++ .++|++++++++ .+.+.+.... +.
T Consensus 251 llI~DEv~~g~g~~g~~~~~~~~-~~~~di~t~s--K~l~~G~~~ig~~~~~~~i--~~~~~~~~~~-~~---------- 314 (452)
T 3n5m_A 251 LLISDEVICGFGRTGKAFGFMNY-DVKPDIITMA--KGITSAYLPLSATAVKREI--YEAFKGKGEY-EF---------- 314 (452)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGT-TCCCSEEEEC--GGGGTTSSCCEEEEEEHHH--HGGGCSSSTT-CS----------
T ss_pred EEEEecchhCCCcccccchhhhc-CCCCCEEeec--ccccCCCcceEEEEECHHH--HHHHhhccCC-CC----------
Confidence 9999999773 2221 111111 0135777654 888765 578999999988 3333210000 00
Q ss_pred ccccccccccccc-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEe
Q 038499 341 DTLYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419 (609)
Q Consensus 341 ~~~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~ 419 (609)
+ ..... .+.|.......+++.... +..-.+.+.+....+++.+.+.+..+|.+....+ ...++.+.+
T Consensus 315 ---~----~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~i~~ 382 (452)
T 3n5m_A 315 ---F----RHINTFGGNPAACALALKNLEIIE-NENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRG----KGLLVGIEL 382 (452)
T ss_dssp ---C----CCCCSSTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE----SSSCEEEEE
T ss_pred ---c----cccCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE----EEEEEEEEE
Confidence 0 00000 122222222233343321 1111344444444555555555566666654432 233444444
Q ss_pred ccCCCCCcCCCCCCCCCCCCCC---hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCc
Q 038499 420 HSSTINSSLGENTKTETDKPLH---GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPG 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~---~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g 496 (609)
.. ... ....++ ...+++.|.+ .||.++++..|... .++
T Consensus 383 ~~-~~~----------~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~---------------------------~~~ 423 (452)
T 3n5m_A 383 VN-DKE----------TKEPIDNDKIASVVNACKE-KGLIIGRNGMTTAG---------------------------YNN 423 (452)
T ss_dssp EE-ETT----------TTEECCHHHHHHHHHHHHH-TTEECEECTTSSTT---------------------------CCC
T ss_pred ec-CCc----------ccCCCCHHHHHHHHHHHHH-CCcEEeecCcccCC---------------------------CCC
Confidence 32 100 000011 2467777766 59999976544311 248
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 497 WTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 497 ~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
++||++++..|++|+++++++|++++++
T Consensus 424 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 424 ILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988753
No 200
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.85 E-value=3.2e-19 Score=193.28 Aligned_cols=360 Identities=11% Similarity=0.014 Sum_probs=209.5
Q ss_pred CCCccccCCCCCCceEEecCC------CCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHT------ASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~------a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
+.+.++.+..|+ .|+|.. ..|..++.|.+++.+.+.... .+.. .........++++.++++++.+
T Consensus 39 ~~g~~~~d~~g~---~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~~~----~~~~~~~~~~l~~~la~~~~~~ 109 (449)
T 3a8u_X 39 AEGSWLVDDKGR---KVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD--YSPG----FQYGHPLSFQLAEKITDLTPGN 109 (449)
T ss_dssp EEBTEEEETTCC---EEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS--CCCS----SSCCCHHHHHHHHHHHTTSSTT
T ss_pred eecCEEEECCCC---EEEECCccHhhccCCCCCHHHHHHHHHHHHhCC--Cccc----cccCCHHHHHHHHHHHHhCCCC
Confidence 344455444443 588875 335568899999998886532 1110 0112345678899999999876
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcC------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSL------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G------------~~ 204 (609)
.+ +|+|++ |+++++..++.++... . +. +.-++++ .|++....||+. ...+...| ..
T Consensus 110 ~~-~v~~~~-ggsea~~~al~~~~~~-~---~~---~g~~~~~--~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 178 (449)
T 3a8u_X 110 LN-HVFFTD-SGSECALTAVKMVRAY-W---RL---KGQATKT--KMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD 178 (449)
T ss_dssp EE-EEEEES-SHHHHHHHHHHHHHHH-H---HH---TTCTTCC--EEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS
T ss_pred CC-EEEEcC-cHHHHHHHHHHHHHHH-H---Hh---cCCCCCC--EEEEECCCcCCCChhhhhccCChhhccccCCCCCC
Confidence 65 899995 5555677776654200 0 00 0001445 466655555544 44444433 13
Q ss_pred EEEEecCCCC-----CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDDDG-----LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~~g-----~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
++.++.+... .+| +++|+++|++.. .+++++++++..+|+||.+.| +++|.++|++||+++|
T Consensus 179 ~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li 257 (449)
T 3a8u_X 179 VDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD-ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLV 257 (449)
T ss_dssp EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred CeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC-CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEE
Confidence 4555543211 246 999999997421 025678888777788999988 9999999999999999
Q ss_pred Eecccc-CCcccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 268 FDFAAS-GPYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 268 vD~A~~-~~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
+|++++ ++.... .+.... ...|++ +++|++++. ..+|++++++++. +.+.....+. .
T Consensus 258 ~Dev~~~~g~~g~~~~~~~~~-~~~di~--s~sK~l~~G~~~~G~~~~~~~~~--~~l~~~~~~~-~------------- 318 (449)
T 3a8u_X 258 FDEVITGFGRTGSMFGADSFG-VTPDLM--CIAKQVTNGAIPMGAVIASTEIY--QTFMNQPTPE-Y------------- 318 (449)
T ss_dssp EECTTTTTTTTSSSSHHHHHT-CCCSEE--EECGGGGTTSSCCEEEEEEHHHH--HHHHTCSSCT-T-------------
T ss_pred EeccccCccccCcchhhhhcC-CCCCEE--EEcccccCCCCceEEEEECHHHH--HHhhccCccc-c-------------
Confidence 999984 543211 111110 135776 455999852 2389999998873 2221110000 0
Q ss_pred cccccccc-ccCCC--hhHHH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceEEeCCCCCCCcceE
Q 038499 344 YLEDIEER-ESGGT--PQVIQ--MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIKILGNTSTKRQAIL 415 (609)
Q Consensus 344 ~~~~~~~r-~~~gt--p~i~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~v~~~~~~~r~~~~ 415 (609)
... ...+| .+.++ ...++++.. +. +.+.++.+++.+++.+.|+++ +.+.... ....++
T Consensus 319 -----~~~~~~~~t~~~~~~~~aa~~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~----~~g~~~ 384 (449)
T 3a8u_X 319 -----AVEFPHGYTYSAHPVACAAGLAALCLL--QK---ENLVQSVAEVAPHFEKALHGIKGAKNVIDIR----NFGLAG 384 (449)
T ss_dssp -----SCSSCCCCTTTTCHHHHHHHHHHHHHH--HH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEE----EETTEE
T ss_pred -----cccccccCCCcccHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEe----eeEEEE
Confidence 000 00111 12222 223344432 21 235667777888888887664 3222111 123455
Q ss_pred EEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCC
Q 038499 416 SFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKP 495 (609)
Q Consensus 416 ~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~ 495 (609)
++.+.. .. .....+...+.+.|.+ .||.++++ .
T Consensus 385 ~i~~~~-~~-----------~~~~~~~~~~~~~l~~-~Gv~v~~~----------------------------------g 417 (449)
T 3a8u_X 385 AIQIAP-RD-----------GDAIVRPFEAGMALWK-AGFYVRFG----------------------------------G 417 (449)
T ss_dssp EEEECC-BT-----------TBSSHHHHHHHHHHHH-HTEECEEE----------------------------------T
T ss_pred EEEEec-Cc-----------ccccccHHHHHHHHHH-CCcEEecC----------------------------------C
Confidence 555543 11 0000012368888866 49999843 1
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 496 GWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 496 g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+++||++++.+|++|+++++++|+++++.
T Consensus 418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999998765
No 201
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=2.9e-19 Score=194.26 Aligned_cols=339 Identities=13% Similarity=0.046 Sum_probs=207.2
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|..++ |-.++.|.+++.+.+.... +.. .+........+++++++++++.+.+ +|+|+++|+. +
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~---~~~---~~~~~~~~~~~L~e~la~~~~~~~~-~v~~~~sGse-A 147 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN---HVM---FGGLTHEPAARLAKLLVDITPAGLD-TVFFSDSGSV-S 147 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS---CCC---SSSEECHHHHHHHHHHHHHSSTTEE-EEEEESSHHH-H
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc---Ccc---ccccCCHHHHHHHHHHHHhCCCCcC-EEEEeCcHHH-H
Confidence 58998754 4568899999988876531 111 0111234567899999999987665 8999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc--------------CceEEEEecCC--CCCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS--------------LAEVVEIGLDD--DGLL 216 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~--------------G~~vv~v~~~~--~g~l 216 (609)
+..+++++... ++ ..-++|+. .|++....||......... ...+..++... .+..
T Consensus 148 ~~~Alk~a~~~----~~----~~g~~g~~-~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 218 (457)
T 3tfu_A 148 VEVAAKMALQY----WR----GRGLPGKR-RLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPA 218 (457)
T ss_dssp HHHHHHHHHHH----HH----HTTCTTCC-EEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHH
T ss_pred HHHHHHHHHHH----HH----hcCCCCCc-eEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHH
Confidence 66655543100 00 00014544 4555555555433222221 22344444332 2235
Q ss_pred CHHHHHHHHhhhccCCCceEEEEec-ccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Ccccc--cCCCCCCCC
Q 038499 217 DIEALRSKLELYKDAKRPILGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEI--DVRSGQTDG 288 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s~-~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~i--d~~~~~~~~ 288 (609)
|+++|+++|+++. +++++++++. ++|++|.+.+ +++|.++|++||+++|+|+++.. +.... .+... ...
T Consensus 219 d~~~le~~l~~~~--~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~-~~~ 295 (457)
T 3tfu_A 219 YSAAFEAQLAQHA--GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHA-GVS 295 (457)
T ss_dssp HHHHHHHHHHHHG--GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHH-TCC
T ss_pred HHHHHHHHHHhCC--CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhc-CCC
Confidence 8899999997431 3678899998 9999999987 89999999999999999999763 22111 00000 014
Q ss_pred ccEEEEcCCCCCCCCC-CcEEEEEechhhccCCCC---C--CccCCCceEeecccccccccccccccccccCCChhHHHH
Q 038499 289 YDAIFLSTHKFLGGPG-SPGILLMTKALYQLGSFP---P--STCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQM 362 (609)
Q Consensus 289 ~D~v~~S~hK~lggp~-g~G~L~~~~~~~~l~~~~---p--~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~ 362 (609)
.|++++ .|.++|.. .+|++++++++. +.+. + ...++. ..+.|.....
T Consensus 296 pdiit~--sK~l~gG~~~lG~v~~~~~i~--~~~~~~~~~~~~~~~t-----------------------~~~n~~a~aa 348 (457)
T 3tfu_A 296 PDIMCV--GKALTGGYLSLAATLCTADVA--HTISAGAAGALMHGPT-----------------------FMANPLACAV 348 (457)
T ss_dssp CSEEEE--CGGGGTTSSCCEEEEEEHHHH--HHHHHSSSCSCCCCCT-----------------------TTTCHHHHHH
T ss_pred ceEEEE--ChhhhCCCcceEEEEEcHHHH--HHhhccCCCceeEecC-----------------------CCcCHHHHHH
Confidence 577755 59998753 689999999883 2221 0 011100 0122222222
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC---CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN---QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~---p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
..++++.. +. +.+.++.+++.+++++.|.++ |++..... ...++.+.+.. +
T Consensus 349 a~aaL~~~--~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~----~G~~~~i~l~~-~---------------- 402 (457)
T 3tfu_A 349 SVASVELL--LG---QDWRTRITELAAGLTAGLDTARALPAVTDVRV----CGAIGVIECDR-P---------------- 402 (457)
T ss_dssp HHHHHHHH--HT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEE----CSSCEEEEESS-C----------------
T ss_pred HHHHHHHH--hh---hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeec----CCeEEEEEECC-c----------------
Confidence 23344432 22 234566667777777777653 45543322 23455555543 2
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.+...+.+.|.++ ||.+++. .+++||++++..|++|+++++++|+
T Consensus 403 ~~~~~~~~~l~~~-Gv~v~~~----------------------------------~~~lRi~p~~~~t~eei~~~l~~L~ 447 (457)
T 3tfu_A 403 VDLAVATPAALDR-GVWLRPF----------------------------------RNLVYAMPPYICTPAEITQITSAMV 447 (457)
T ss_dssp CCHHHHHHHHHHT-TEECCCB----------------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHC-CeEEEec----------------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 2467888888775 9998831 2689999999999999999999999
Q ss_pred HHHHhc
Q 038499 520 FIAIYG 525 (609)
Q Consensus 520 ~v~~~~ 525 (609)
++++..
T Consensus 448 ~~l~~~ 453 (457)
T 3tfu_A 448 EVARLV 453 (457)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998764
No 202
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=1.9e-19 Score=192.30 Aligned_cols=193 Identities=13% Similarity=0.036 Sum_probs=146.4
Q ss_pred HHHHHHHHHhhcC-CccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEE--eCChHHHHHHHHHHHhcccchhh
Q 038499 91 RYIENYIINNVLP-FYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIF--CGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 91 ~~v~~ai~~~~~~-~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vif--t~sGttaal~~l~~~l~~~~~~~ 167 (609)
..|.+++.++... ...++.+. +.++.. ..+++++.+++++|++. .+++ +++|+. ++..++..+
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~-~~y~~~---~~~~Le~~lA~l~g~e~--alv~p~~~sGt~-Ai~~al~al------- 97 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTG-YGYDDE---GRDTLERVYATVFKTEA--ALVRPQIISGTH-AISTVLFGI------- 97 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCT-TCTTCH---HHHHHHHHHHHHHTCSE--EEEETTSCSHHH-HHHHHHHHH-------
T ss_pred HHHHHHHHHhhhhhhccCCCcC-CCCChh---HHHHHHHHHHHHhCCCc--EEEECCCccHHH-HHHHHHHHh-------
Confidence 4577778776432 22233222 223322 26778899999999863 4553 657765 566666554
Q ss_pred HHHHHHhhhcCCCceEEEECC-CCccchHHH----------HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceE
Q 038499 168 LREKLIKCLRDEERWVVFVGP-HEHHSNLLS----------WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPIL 236 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~~----------~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~l 236 (609)
+++|| .|+++. ..|...... ++..|++++.++.++++.+|+++|+++++ ++|++
T Consensus 98 --------l~~GD--~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~-----~~tkl 162 (409)
T 3jzl_A 98 --------LRPDD--ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT-----PKTKM 162 (409)
T ss_dssp --------CCTTC--EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC-----TTEEE
T ss_pred --------cCCCC--EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc-----CCCeE
Confidence 47899 688887 778776643 35679999999998889999999999998 68999
Q ss_pred EEEec----ccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCC--cEE
Q 038499 237 GSFSA----CSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGS--PGI 308 (609)
Q Consensus 237 v~~s~----~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~ 308 (609)
|++++ ++|+||.+.|+++|+++||+ ||+++++|++++.+....+... .++|+++.|+||++||++. .|+
T Consensus 163 V~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~---~g~Div~~S~sK~lgg~~~~~GG~ 239 (409)
T 3jzl_A 163 IGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPE---VGADIIAGSLIKNPGGGLAKTGGY 239 (409)
T ss_dssp EEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGG---GTCSEEEEETTSGGGTTTCSSCEE
T ss_pred EEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccc---cCCeEEEECccccCCccCCceEEE
Confidence 99999 99999999999999999999 9999999999887653222222 2789999999999997642 499
Q ss_pred EEEechh
Q 038499 309 LLMTKAL 315 (609)
Q Consensus 309 L~~~~~~ 315 (609)
++.++++
T Consensus 240 v~~~~~l 246 (409)
T 3jzl_A 240 IAGKEAL 246 (409)
T ss_dssp EEECHHH
T ss_pred EEeCHHH
Confidence 9999887
No 203
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.84 E-value=3.5e-18 Score=185.14 Aligned_cols=362 Identities=13% Similarity=0.046 Sum_probs=204.0
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ .|+|..++ |..++.|.+++.+.+.... +.. ..........+++++++++++.+
T Consensus 33 g~G~~v~d~~g~---~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~~---~~~~~~~~~~~la~~l~~~~~~~ 103 (448)
T 3dod_A 33 GTGIKVKDINGK---EYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA---HST---LLGMTNVPATQLAETLIDISPKK 103 (448)
T ss_dssp EEBTEEEETTSC---EEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCS---CCC---CSSSEEHHHHHHHHHHHHHSCTT
T ss_pred eeeCEEEECCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhcc---Ccc---ccccCCHHHHHHHHHHHHhCCCC
Confidence 556666666664 38898753 4567899999998886531 110 01112345678889999999766
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC----CceEEEECCCCccchHHHHHH-cC----------
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE----ERWVVFVGPHEHHSNLLSWRQ-SL---------- 202 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g----d~~~Vlv~~~~h~s~~~~~~~-~G---------- 202 (609)
.+ +|+|+++|+. ++..+++++... ...+| + .|++....||+....... .+
T Consensus 104 ~~-~v~~~~sGse-A~~~al~~~~~~-----------~~~~G~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 104 LT-RVFYSDSGAE-AMEIALKMAFQY-----------WKNIGKPEKQ--KFIAMKNGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp EE-EEEEESSHHH-HHHHHHHHHHHH-----------HHHTTCTTCC--EEEEEC-------------------------
T ss_pred CC-EEEEeCchHH-HHHHHHHHHHHH-----------HHhhCCCCCC--EEEEECCCCCCccHHHHHhcCCccccccccC
Confidence 55 8999955555 566655544200 00133 4 577766666654422221 11
Q ss_pred --ceEEEEecCCCCCC-----------CHHHHHHHHhhhccCCCceEEEEeccc-CccccccC----HHHHHHHHHHhCC
Q 038499 203 --AEVVEIGLDDDGLL-----------DIEALRSKLELYKDAKRPILGSFSACS-NVTGIYSD----TRSIARLLHQYGG 264 (609)
Q Consensus 203 --~~vv~v~~~~~g~l-----------d~e~L~~al~~~~~~~~~~lv~~s~~s-n~TG~~~d----l~~I~~la~~~g~ 264 (609)
..+..++.+..... |+++|+++|++. .+++++++++.++ |++|.+.+ +++|.++|++||+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~ 246 (448)
T 3dod_A 169 LMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEH--HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDV 246 (448)
T ss_dssp ----CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTC
T ss_pred CCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhC--CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCC
Confidence 23444554432222 489999998732 1457788888887 99998877 8999999999999
Q ss_pred eEEEeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeecccccc
Q 038499 265 FACFDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 265 ~vivD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (609)
++|+|++++. +.... ..... .-..|++++| |.+++. ..+|++++++++ ++.+.........
T Consensus 247 ~lI~DEv~~g~g~~g~~~a~~~~-~~~~di~t~s--K~l~~G~~~ig~v~~~~~~--~~~~~~~~~~~~~---------- 311 (448)
T 3dod_A 247 LMIVDEVATGFGRTGKMFACEHE-NVQPDLMAAG--KGITGGYLPIAVTFATEDI--YKAFYDDYENLKT---------- 311 (448)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGG-TCCCSEEEEC--GGGGTTSSCCEEEEEEHHH--HHTTCSCGGGCCC----------
T ss_pred EEEEeccccCCCcccchhhhhhc-CCCCCEEEec--ccccCCcCceEEEEECHHH--HHHhhhccccCCc----------
Confidence 9999999873 22111 11111 0135777654 999875 378999999998 3444321000000
Q ss_pred ccccccccccccc-CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEe
Q 038499 341 DTLYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419 (609)
Q Consensus 341 ~~~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~ 419 (609)
+ ..... .+.|.......+++.... +..-.+.+.+....+++.+.+ +..+|.+..... ...++++.+
T Consensus 312 ---~----~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~----~g~~~~~~~ 378 (448)
T 3dod_A 312 ---F----FHGHSYTGNQLGCAVALENLALFE-SENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQ----LGFMCGAEL 378 (448)
T ss_dssp ---C----CCCCTTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEE----ETTEEEEEE
T ss_pred ---c----cccCCCCcCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEe----eeEEEEEEE
Confidence 0 00000 122222222234444321 111134444444455555555 556665543321 234555555
Q ss_pred ccCCCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 420 HSSTINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
.. ... ..... ....+++.|.++ ||.++++
T Consensus 379 ~~-~~~----------~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---------------------------------- 412 (448)
T 3dod_A 379 VR-SKE----------TKEPYPADRRIGYKVSLKMREL-GMLTRPL---------------------------------- 412 (448)
T ss_dssp CS-BTT----------TTBCCCGGGCHHHHHHHHHHHT-TEECCEE----------------------------------
T ss_pred cc-Ccc----------cccccchhhHHHHHHHHHHHHC-CcEEecc----------------------------------
Confidence 43 210 00000 035688888764 9998743
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+++||++++..|++|+++++++|+++++..
T Consensus 413 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 413 GDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2689999999999999999999999988754
No 204
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.83 E-value=4.7e-19 Score=192.17 Aligned_cols=345 Identities=10% Similarity=-0.039 Sum_probs=201.8
Q ss_pred eEEecCCC------CCCChHHHH-H-HHHH---hhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCCCcEEEe
Q 038499 78 LTYADHTA------SGRSLRYIE-N-YIIN---NVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLG-GGQEDAMIFC 145 (609)
Q Consensus 78 ~vyld~~a------~g~~~~~v~-~-ai~~---~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g-~~~~~~vift 145 (609)
..|+|..+ .|..++.|. + ++.+ .+... .+... . .......++++.++++++ .+.+ +|+|+
T Consensus 54 ~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~---~~~~~---~-~~~~~~~~la~~la~~~~~~~~~-~v~~~ 125 (449)
T 2cjg_A 54 RRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALN---KPSNS---D-VYSVAMARFVETFARVLGDPALP-HLFFV 125 (449)
T ss_dssp CEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTC---CCCTT---T-CCCHHHHHHHHHHHHHHCCTTCC-EEEEE
T ss_pred cEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhc---CCCCc---c-cCCHHHHHHHHHHHHhcCCCCCC-EEEEe
Confidence 35889743 344678898 8 8888 65432 11110 0 123456788889999997 3444 89999
Q ss_pred CChHHHHHHHHHHHhcccchhhHHHHHHhhhcC-CCceEEEECCCCccchHHHHH---------HcCc-----eEEEEec
Q 038499 146 GSGTTAAIKRLQEVMGIAVPSILREKLIKCLRD-EERWVVFVGPHEHHSNLLSWR---------QSLA-----EVVEIGL 210 (609)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~-gd~~~Vlv~~~~h~s~~~~~~---------~~G~-----~vv~v~~ 210 (609)
++|+. ++..++.+.-..... +.+....-.+ ++ .|++....||+....+. ..+. .++.++.
T Consensus 126 ~~gse-A~~~aik~a~~~~~~--~~~~~~~~~~~~~--~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (449)
T 2cjg_A 126 EGGAL-AVENALKAAFDWKSR--HNQAHGIDPALGT--QVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPY 200 (449)
T ss_dssp SSHHH-HHHHHHHHHHHHHHH--HHHHTTSCTTCCC--EEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCC
T ss_pred CchHH-HHHHHHHHHHHHhcc--cccccccccCCCC--EEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcC
Confidence 55555 566655432100000 0000000012 55 57777666665443221 1222 5666766
Q ss_pred CC--CC--------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CC
Q 038499 211 DD--DG--------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GP 275 (609)
Q Consensus 211 ~~--~g--------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~ 275 (609)
++ .. ..++++|++++++. .+++++++++.++|+||.+.+ +++|.++|++||+++|+|++|+ ++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g 278 (449)
T 2cjg_A 201 MRPGLDEPAMAALEAEALRQARAAFETR--PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCG 278 (449)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHS--TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred CCchhhccccchhhHHHHHHHHHHHHhc--CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCC
Confidence 54 11 24667799888631 157889899888899998777 9999999999999999999988 33
Q ss_pred cccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc
Q 038499 276 YVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES 353 (609)
Q Consensus 276 ~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~ 353 (609)
.... .+... .-..|++++ +|++ | +|++++++++ ++.+.+...+.+. .....
T Consensus 279 ~~g~~~~~~~~-~~~~di~t~--sK~l--~--iG~~~~~~~~--~~~l~~~~~~~~~------------------~~~t~ 331 (449)
T 2cjg_A 279 LTGTAWAYQQL-DVAPDIVAF--GKKT--Q--VCGVMAGRRV--DEVADNVFAVPSR------------------LNSTW 331 (449)
T ss_dssp TTSSSSTHHHH-TCCCSEEEE--CGGG--S--SEEEEECGGG--GGSTTCTTTSTTS------------------SCCSS
T ss_pred ccCcceeeccc-CCCceEEEe--cCcc--c--EEEEEECHHH--hhhhhhcccCCcc------------------cccCC
Confidence 2211 11111 014577765 4988 3 7999999988 4443331111000 00000
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCc-eEEeCCCCCCCcceEEEEeccCCCCCcC
Q 038499 354 GGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQN-IKILGNTSTKRQAILSFNIHSSTINSSL 428 (609)
Q Consensus 354 ~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~ 428 (609)
.+.+.......+++.... . +.+.++.+++++++.+.|++ +|. +....+ ...++.+.+.. .
T Consensus 332 ~~n~~~~~aa~aal~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~----~g~~~~~~~~~-~----- 396 (449)
T 2cjg_A 332 GGNLTDMVRARRILEVIE--A---EGLFERAVQHGKYLRARLDELAADFPAVVLDPRG----RGLMCAFSLPT-T----- 396 (449)
T ss_dssp SSCHHHHHHHHHHHHHHH--H---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEE----ETTEEEEECSS-H-----
T ss_pred CCCHHHHHHHHHHHHHHH--h---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEee----ccEEEEEEECC-h-----
Confidence 122222222234444321 1 34556777777777777764 344 433322 23455554332 1
Q ss_pred CCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCH
Q 038499 429 GENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSN 508 (609)
Q Consensus 429 ~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~ 508 (609)
.....+++.|.+ .||.++++. ++++|+++++.+|+
T Consensus 397 -----------~~~~~~~~~l~~-~Gv~v~~~g---------------------------------~~~iRi~~~~~~t~ 431 (449)
T 2cjg_A 397 -----------ADRDELIRQLWQ-RAVIVLPAG---------------------------------ADTVRFRPPLTVST 431 (449)
T ss_dssp -----------HHHHHHHHHHHH-TTEECEEET---------------------------------TTEEEECCCTTCCH
T ss_pred -----------HHHHHHHHHHHH-CCeEEecCC---------------------------------CCEEEEECCCCCCH
Confidence 124578888876 599988431 37899999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 038499 509 EEFEFTLEALEFIAIY 524 (609)
Q Consensus 509 eeid~ll~al~~v~~~ 524 (609)
+|+++++++|+++++.
T Consensus 432 e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 432 AEIDAAIAAVRSALPV 447 (449)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 205
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.83 E-value=2.7e-18 Score=186.68 Aligned_cols=365 Identities=13% Similarity=0.038 Sum_probs=213.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ -|+|..++ |..++.|.+++.+.+.... ..++ ..........+++++++++++.+
T Consensus 40 ~~G~~~~d~~G~---~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~----~~~~~~~~~~~la~~l~~~~~~~ 111 (460)
T 3gju_A 40 GEGVTVWDNNGR---KSIDAFAGLYCVNVGYGRQKIADAIATQAKNLA-YYHA----YVGHGTEASITLAKMIIDRAPKG 111 (460)
T ss_dssp EEBTEEEETTCC---EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHS-CCCC----CTTCCCHHHHHHHHHHHHHSCTT
T ss_pred eeccEEEECCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhcc-cccc----ccccCCHHHHHHHHHHHhhCCCC
Confidence 444555555554 38887654 4567889999988876421 1111 11112345778899999998776
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH-HHHc------------Cce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS-WRQS------------LAE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~------------G~~ 204 (609)
.+ +|+|+++|+ +++..+++++-... ...-++++. .|++....||..... .... +..
T Consensus 112 ~~-~v~~~~gGs-eA~~~al~~~~~~~--------~~~g~~~~~-~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 180 (460)
T 3gju_A 112 MS-RVYFGLSGS-DANETNIKLIWYYN--------NVLGRPEKK-KIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAP 180 (460)
T ss_dssp EE-EEEEESSHH-HHHHHHHHHHHHHH--------HHTTCTTCC-EEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTT
T ss_pred cC-EEEEeCchH-HHHHHHHHHHHHHH--------HhcCCCCCC-EEEEECCCcCCCCHHHhhccCCcccccccCCCCCC
Confidence 65 899995444 46666655541000 000013332 566655555554433 2221 124
Q ss_pred EEEEecCC-----CCCCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDD-----DGLLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~-----~g~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++... +..++ +++|++++++. ..+++++++++.++|++|.+.+ +++|.++|++||+++|
T Consensus 181 ~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~-~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI 259 (460)
T 3gju_A 181 VLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE-GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLV 259 (460)
T ss_dssp EEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH-CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEE
T ss_pred CEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 55565332 11123 68899888742 1135778889988999999776 8999999999999999
Q ss_pred Eecccc-CCccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCC-------CCccCCCceEeecc
Q 038499 268 FDFAAS-GPYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFP-------PSTCGGGTVNYVNG 336 (609)
Q Consensus 268 vD~A~~-~~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~-------p~~~ggg~v~~~~~ 336 (609)
+|++++ ++... ...... .-..|++++| |.++|. ..+|++++++++. +.+. +...++
T Consensus 260 ~DEv~~g~gr~g~~~~~~~~-~~~pdi~t~s--K~l~gG~~~lg~v~~~~~i~--~~~~~~~~~~~~~~~~~-------- 326 (460)
T 3gju_A 260 ADEVVTGFGRLGTMFGSDHY-GIKPDLITIA--KGLTSAYAPLSGVIVADRVW--QVLVQGSDKLGSLGHGW-------- 326 (460)
T ss_dssp EECTTTTTTTTSSSCHHHHH-TCCCSEEEEC--GGGTTTSSCCEEEEEEHHHH--HHHHHHHHHHCSCSCCC--------
T ss_pred EeccccCCCcccccchHhhc-CCCCCeeeee--hhhcCCCCCeEEEEECHHHH--HHHhcccccccccccCC--------
Confidence 999987 33221 000000 0135777665 999875 3689999999873 2221 110000
Q ss_pred cccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEE
Q 038499 337 FNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILS 416 (609)
Q Consensus 337 ~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~ 416 (609)
...+.|.......+++.... +..-.+.+.+....+++.+.+.+..+|.+....+ ...++.
T Consensus 327 ---------------t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~g~~~~ 386 (460)
T 3gju_A 327 ---------------TYSAHPICVAAGVANLELID-EMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRG----DGMLAA 386 (460)
T ss_dssp ---------------TTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE----ETTEEE
T ss_pred ---------------CCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee----eeEEEE
Confidence 00122222222233444321 2222455666666667777777777776654432 234555
Q ss_pred EEeccCCCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCC
Q 038499 417 FNIHSSTINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYV 491 (609)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~ 491 (609)
+.+.. ... ..... ....+.+.|.+ .||.++++.
T Consensus 387 ~~~~~-~~~----------~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------------------------------ 424 (460)
T 3gju_A 387 VEFVA-DKD----------DRVFFDASQKIGPQVATALAA-SGVIGRAMP------------------------------ 424 (460)
T ss_dssp EEECS-BTT----------TTBCCCGGGCHHHHHHHHHHH-TTEECEECS------------------------------
T ss_pred EEEcc-Ccc----------ccccccchHHHHHHHHHHHHH-CCeEEecCC------------------------------
Confidence 55543 110 00000 14567787866 499988532
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 492 GVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 492 ~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++++||++++..|++|+++++++|+++++..
T Consensus 425 --~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 425 --QGDILGFAPPLCLTREQADIVVSKTADAVKSV 456 (460)
T ss_dssp --SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 13799999999999999999999999988754
No 206
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=2.8e-19 Score=191.77 Aligned_cols=214 Identities=14% Similarity=0.051 Sum_probs=155.2
Q ss_pred HHHHHHHHhhccCCCccccCCCCCCceEEecCCCCCCChHHHHHHHHHhhcCC--ccCCCCCCchhhHHHHHHHHHHHHH
Q 038499 52 EKKLTWLQSQIIGKNAEFDSPFGKRRLTYADHTASGRSLRYIENYIINNVLPF--YGNTHTCDSYVGQHTTNMVHEASNY 129 (609)
Q Consensus 52 ~~~~~~~r~~~~g~~~~~~~p~g~~~~vyld~~a~g~~~~~v~~ai~~~~~~~--~~n~~~~~~~~~~~~~~~~~e~r~~ 129 (609)
+...+++++++...+ .+++.|+ ..|.+++.+..... +.+ .. .+.++.. ..+++++.
T Consensus 25 ~~~~~~~~~~~~~~~----------~i~~~n~-------~~Vl~a~~~~~~~~~~~~~-~~-gy~Y~~~---g~~~Le~~ 82 (427)
T 3hvy_A 25 ERALNDVEKEFKYYD----------EIREYNQ-------LKVLKAFQEERISESHFTN-SS-GYGYNDI---GRDSLDRV 82 (427)
T ss_dssp HHHHHHHHHHHHHHH----------HHHHHHH-------HHHHHHHHHTTCCGGGSCC-CC-TTCTTCH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----------HHHHhhH-------HHHHHHHHHHHHHHHhccc-Cc-CCCCCch---hHHHHHHH
Confidence 444566777765332 3444443 56778887754422 222 12 1222222 27788999
Q ss_pred HHHHhCCCCCCcEEE--eCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECC-CCccchHH----------
Q 038499 130 IKKCLGGGQEDAMIF--CGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGP-HEHHSNLL---------- 196 (609)
Q Consensus 130 ia~~~g~~~~~~vif--t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~---------- 196 (609)
+++++|++. .+++ ++||+. ++..++..+ ++||| .|+++. ..|+....
T Consensus 83 lA~l~g~e~--alv~p~~~sGt~-A~~~al~al---------------l~pGD--~Vl~~~~~~y~~~~~~~g~~~~~~~ 142 (427)
T 3hvy_A 83 YANIFNTES--AFVRPHFVNGTH-AIGAALFGN---------------LRPND--TMMSICGMPYDTLHDIIGMDDSKKV 142 (427)
T ss_dssp HHHHHTCSE--EEEETTCCSHHH-HHHHHHHHT---------------CCTTC--EEEECSSSCCGGGHHHHTCCTTCCS
T ss_pred HHHHhCCCc--eEEeCCCCcHHH-HHHHHHHHh---------------cCCCC--EEEEeCCCCchhHHHHhccccchhh
Confidence 999999864 4553 557765 566666655 58999 688887 77776652
Q ss_pred -HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEec----ccCccccccCHHHHHHHHHH--hCCeEEEe
Q 038499 197 -SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSA----CSNVTGIYSDTRSIARLLHQ--YGGFACFD 269 (609)
Q Consensus 197 -~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~----~sn~TG~~~dl~~I~~la~~--~g~~vivD 269 (609)
.++..|++++.++. +++.+|+++|+++++++ ++|++|++++ ++||||.+.|+++|+++||+ ||+++++|
T Consensus 143 ~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~---~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD 218 (427)
T 3hvy_A 143 GSLREYGVKYKMVDL-KDGKVDINTVKEELKKD---DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVD 218 (427)
T ss_dssp CCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHC---TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred hHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCC---CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEE
Confidence 24557999999998 67889999999999842 3799999999 99999999999999999999 89999999
Q ss_pred ccccCCcccccCCCCCCCCccEEEEcCCCCCCC---CCCcEEEEEechh
Q 038499 270 FAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGG---PGSPGILLMTKAL 315 (609)
Q Consensus 270 ~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lgg---p~g~G~L~~~~~~ 315 (609)
++++.+........ .++|+++.|+||++|| |.| |+++.++++
T Consensus 219 ~a~~~~~~~~~p~~---~gaDiv~~S~sK~lgg~g~~~G-G~i~~~~~l 263 (427)
T 3hvy_A 219 NCYGEFVEEKEPTD---VGADIIAGSLIKNIGGGIATTG-GYIAGKEEY 263 (427)
T ss_dssp CTTCTTTSSSCGGG---GTCSEEEEETTSGGGTTTCCSC-EEEEECHHH
T ss_pred CCccccccCCCCcc---cCCeEEEECCcccccccccceE-EEEEECHHH
Confidence 99887652222112 2689999999999998 444 999999887
No 207
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=1.2e-18 Score=189.07 Aligned_cols=349 Identities=13% Similarity=0.051 Sum_probs=198.5
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |..++.|.+++.+++... .+.. ......+...++++++++.++....++|+||++|+. +
T Consensus 62 ~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~---~~~~---~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGse-A 134 (451)
T 3oks_A 62 RLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF---THTC---FMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSE-A 134 (451)
T ss_dssp EEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC---SCCT---TTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHH-H
T ss_pred EEEEcCCCccccccCCCCHHHHHHHHHHHHhc---cccc---CCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHH-H
Confidence 48998754 456889999999888653 1211 111223556788899999987543348999965555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc-C-------------ceEEEEecCCC-----
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-L-------------AEVVEIGLDDD----- 213 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G-------------~~vv~v~~~~~----- 213 (609)
+..++++.- ..+|+. .|++....||+........ + ..+..++....
T Consensus 135 ~~~Alk~a~--------------~~~g~~-~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T 3oks_A 135 VENAVKIAR--------------SHTHKP-AVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAE 199 (451)
T ss_dssp HHHHHHHHH--------------HHHCCC-EEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGG
T ss_pred HHHHHHHHH--------------HhcCCC-eEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 655554431 012322 5666666666544333221 1 25666665411
Q ss_pred -C-------CCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-Cccc--
Q 038499 214 -G-------LLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVE-- 278 (609)
Q Consensus 214 -g-------~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~-- 278 (609)
| ..+++.++++|.+....+++.+++++.+++..|.+.+ +++|.++|++||+++|+|++++. +...
T Consensus 200 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~ 279 (451)
T 3oks_A 200 FGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM 279 (451)
T ss_dssp GCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc
Confidence 0 1135555555553221235667777777777788877 99999999999999999999873 2211
Q ss_pred ccCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChh
Q 038499 279 IDVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQ 358 (609)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~ 358 (609)
...... ....|++++ +|.+++...+|++++++++ ++.+.+...++.. .+.+.
T Consensus 280 ~~~~~~-~~~pdi~t~--sK~l~~G~~iG~v~~~~~~--~~~~~~~~~~~t~-----------------------~~~~~ 331 (451)
T 3oks_A 280 FACEHE-GIDPDLIVT--AKGIAGGLPLSAVTGRAEI--MDSPHVSGLGGTY-----------------------GGNPI 331 (451)
T ss_dssp SGGGGG-TCCCSEEEE--CGGGGTTSSCEEEEEEHHH--HTCSCTTSBCCSS-----------------------SSCHH
T ss_pred hhhhhc-CCCCCeeee--hhhhhCCcceEEEEECHHH--HhhhcCCCcCCCC-----------------------CCCHH
Confidence 111111 013577755 5999875668999999998 4555433211110 12222
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 359 VIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 359 i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
......+++.... +..-.+.+.++...+++.+.+.+..+|.+..... ...++++.+.. ... ....
T Consensus 332 ~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~G~~~~~~~~~-~~~---------~~~~ 396 (451)
T 3oks_A 332 ACAAALATIETIE-SEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRG----RGAMIAMELVK-AGT---------TEPD 396 (451)
T ss_dssp HHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEEBS-TTS---------CCBC
T ss_pred HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE----eeEEEEEEEec-Ccc---------CCCC
Confidence 2222233444321 1111233333333344444444444555543322 23455555432 100 0000
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
......+.+.|.+ .||.++++.. ..+++||++++..|++|+++++++|
T Consensus 397 ~~~~~~~~~~l~~-~Gv~v~~~~~-------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l 444 (451)
T 3oks_A 397 ADLTKALCAGAHA-AGVIVLSCGT-------------------------------YGNVVRFLPPLSIGDDLLNEGLDVL 444 (451)
T ss_dssp HHHHHHHHHHHHH-TTEECEEECT-------------------------------TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCcEEecCCC-------------------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 0124567777766 5999885421 1378999999999999999999999
Q ss_pred HHHHHh
Q 038499 519 EFIAIY 524 (609)
Q Consensus 519 ~~v~~~ 524 (609)
+++++.
T Consensus 445 ~~~l~~ 450 (451)
T 3oks_A 445 EEVLRG 450 (451)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 988753
No 208
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.82 E-value=7.3e-19 Score=198.31 Aligned_cols=317 Identities=14% Similarity=0.081 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH
Q 038499 121 NMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ 200 (609)
Q Consensus 121 ~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (609)
....++++.+|+++|++. .++++ +|+++++..++.++ +++|| .|+++...|.|+...++.
T Consensus 195 g~i~eaE~~lA~~fGa~~--a~~v~-nGts~An~~ai~al---------------~~pGD--~VLv~r~~H~S~~~~l~l 254 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADR--SYMVT-NGTSTANKIVGMYS---------------APAGS--TILIDRNCHKSLTHLMMM 254 (715)
T ss_dssp THHHHHHHHHHHHHTCSE--EEEES-SHHHHHHHHHHHHH---------------CCTTC--EEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC--ceEEC-cHHHHHHHHHHHHh---------------CCCCC--EEEECCCccHHHHHHHHH
Confidence 357899999999999963 34454 89887877777765 48999 799999999999999999
Q ss_pred cCceEEEEecCCC-C----CC-----CHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 201 SLAEVVEIGLDDD-G----LL-----DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 201 ~G~~vv~v~~~~~-g----~l-----d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
.|+++++++.+.+ . .+ |+++|+++|+++....++++++++++ |++|.+.|+++|+++|++++ +++|+
T Consensus 255 sGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDE 331 (715)
T 3n75_A 255 SDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDS 331 (715)
T ss_dssp SCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEEC
T ss_pred cCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEcc
Confidence 9999999986532 2 24 89999999985311112448889999 99999999999999998764 79999
Q ss_pred cccCCcc--cc--cCCCCCC-CCccEE---EEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccc
Q 038499 271 AASGPYV--EI--DVRSGQT-DGYDAI---FLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 271 A~~~~~~--~i--d~~~~~~-~~~D~v---~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (609)
||+.+.. +. +...+.. .++|++ +.|+||+++|+.+.|+++++++.. ...+
T Consensus 332 AH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~--------------------- 389 (715)
T 3n75_A 332 AWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETF--------------------- 389 (715)
T ss_dssp TTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHH---------------------
T ss_pred ccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHH---------------------
Confidence 9987532 11 1222211 125765 899999999987789999987641 0000
Q ss_pred cccccccccccCCChhHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCc------eEEeCCCCCCCcce
Q 038499 343 LYLEDIEERESGGTPQVIQM--IRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQN------IKILGNTSTKRQAI 414 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~------i~v~~~~~~~r~~~ 414 (609)
.........++|+...+ +.+++++.. ...| +.+.++..++++++++.|.++++ ++++++........
T Consensus 390 ---~~~~~~~~STSpsy~~~AsldaA~~~~~-~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~ 464 (715)
T 3n75_A 390 ---NEAYMMHTTTSPHYGIVASTETAAAMMK-GNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTEC 464 (715)
T ss_dssp ---HHHHHHTSCSSCCHHHHHHHHHHHHHHS-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSC
T ss_pred ---HHHHHhhcCCCchHHHHHHHHHHHHHHH-hhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhh
Confidence 00012233455655443 344444431 1123 34667888889999998887754 67777642111111
Q ss_pred EEEEeccCCCCCc----------------CCCCCCC--CCC----CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhc
Q 038499 415 LSFNIHSSTINSS----------------LGENTKT--ETD----KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLL 472 (609)
Q Consensus 415 ~~f~~~~~~~~~~----------------~~~~~~~--~~~----~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll 472 (609)
|...+ +..+. ..-.+.+ ..| .++++..+.+.|. ++||++--.
T Consensus 465 --~~~~~-~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~-~~~I~~E~~------------ 528 (715)
T 3n75_A 465 --WPLRS-DSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLD-EHGIVVEKT------------ 528 (715)
T ss_dssp --EECCT-TCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHH-HTTCCCSEE------------
T ss_pred --hccCc-ccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHH-HCCCEEEec------------
Confidence 11110 00000 0000111 122 3577889999995 469987621
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 473 DLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 473 ~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
....|=+-++...|++++++++++|.++.+.
T Consensus 529 ---------------------d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 529 ---------------------GPYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp ---------------------ETTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------CCCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1355666677778999999999999988764
No 209
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.82 E-value=9.9e-19 Score=187.52 Aligned_cols=194 Identities=16% Similarity=0.048 Sum_probs=145.7
Q ss_pred HHHHHHHHHhhc-CCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEE--eCChHHHHHHHHHHHhcccchhh
Q 038499 91 RYIENYIINNVL-PFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIF--CGSGTTAAIKRLQEVMGIAVPSI 167 (609)
Q Consensus 91 ~~v~~ai~~~~~-~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vif--t~sGttaal~~l~~~l~~~~~~~ 167 (609)
..|.+++.+... ....+..+. +.++.. ...++++.+++++|++. .+++ +++|+. ++..++..+
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~g-y~y~~~---~~~~Le~~lA~l~g~e~--alv~p~~~sGt~-Ai~~al~al------- 111 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSG-YGYGDI---GRDSLDAVYARVFNTES--ALVRPHFVNGTH-ALGAALFGN------- 111 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCT-TCTTCH---HHHHHHHHHHHHHTCSE--EEEETTCCSHHH-HHHHHHHHH-------
T ss_pred HHHHHHHHHhchhHHhcCCCCC-CCCCHH---HHHHHHHHHHHHhCCcc--eEEeCCCccHHH-HHHHHHHHH-------
Confidence 457777776532 222222222 222322 26778899999999964 4663 557765 566666655
Q ss_pred HHHHHHhhhcCCCceEEEECC-CCccchHH-----------HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCce
Q 038499 168 LREKLIKCLRDEERWVVFVGP-HEHHSNLL-----------SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPI 235 (609)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~-----------~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~ 235 (609)
+++|| .|+++. ..|+.... .++..|++++.++.+++|.+|+++|++++++. ++|+
T Consensus 112 --------l~pGD--~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~---~~tk 178 (427)
T 3i16_A 112 --------LRPGN--TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED---ESIT 178 (427)
T ss_dssp --------CCTTC--EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC---TTEE
T ss_pred --------hCCCC--EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC---CCCE
Confidence 47999 688887 78877653 23567999999999888999999999999731 3789
Q ss_pred EEEEec----ccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCC---CCCc
Q 038499 236 LGSFSA----CSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGG---PGSP 306 (609)
Q Consensus 236 lv~~s~----~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lgg---p~g~ 306 (609)
+|++++ ++||||.+.|+++|+++||+ ||+++++|++++.+....+... .++|+++.|+||++|| +. .
T Consensus 179 lV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~---~gaDiv~~S~sK~lgg~g~~~-g 254 (427)
T 3i16_A 179 LVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTD---VGADLIAGSLIKNIGGGIAPT-G 254 (427)
T ss_dssp EEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGG---GTCSEEEEETTSGGGTTTCCS-C
T ss_pred EEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccc---cCCeEEEecCcccCCCCCCce-E
Confidence 999999 99999999999999999999 9999999999887653222212 2789999999999997 44 4
Q ss_pred EEEEEechh
Q 038499 307 GILLMTKAL 315 (609)
Q Consensus 307 G~L~~~~~~ 315 (609)
|+++.++++
T Consensus 255 G~i~~~~~l 263 (427)
T 3i16_A 255 GYLAGTKDC 263 (427)
T ss_dssp EEEEECHHH
T ss_pred EEEEECHHH
Confidence 999999888
No 210
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.82 E-value=2.4e-18 Score=186.81 Aligned_cols=346 Identities=15% Similarity=0.091 Sum_probs=195.8
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|+.++ |..++.|.+++.+++... .+.. ......+...+++++++++++.+..++|+||++|+. +
T Consensus 65 ~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~---~~~~---~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGse-A 137 (453)
T 4ffc_A 65 SFIDLGAGIAVTTVGASHPAVAAAIADQATHF---THTC---FMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAE-A 137 (453)
T ss_dssp EEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC---SCCT---TTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHH-H
T ss_pred EEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc---cccc---cCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHH-H
Confidence 48998764 456889999998887643 1111 111234556788999999998653348999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc-C-------------ceEEEEecCC----CC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-L-------------AEVVEIGLDD----DG 214 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G-------------~~vv~v~~~~----~g 214 (609)
+..++++.- ..+|+. .|++....||......... + ..+..++... ..
T Consensus 138 ~~~alk~a~--------------~~~g~~-~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (453)
T 4ffc_A 138 VENAIKVAR--------------LATGRP-AVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEP 202 (453)
T ss_dssp HHHHHHHHH--------------HHHCCC-EEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCT
T ss_pred HHHHHHHHH--------------HhcCCC-EEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCcc
Confidence 665554431 012322 5666666666544333221 1 1456666542 11
Q ss_pred CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccC-CcccccC
Q 038499 215 LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEIDV 281 (609)
Q Consensus 215 ~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~id~ 281 (609)
.++ +++|++++.. +++.+++++..++..|.+.+ +++|.++|++||+++|+|++++. +.... +
T Consensus 203 g~~~~~~~~~~~~~l~~~i~~----~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~ 277 (453)
T 4ffc_A 203 GLTGEEAARRAISRIETQIGA----QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-W 277 (453)
T ss_dssp TCCHHHHHHHHHHHHHHHTCG----GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-S
T ss_pred ccchHHHHHHHHHHHHHhcCC----CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-c
Confidence 122 3455555532 34556666666666677766 89999999999999999999863 22211 1
Q ss_pred CCCC--CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhH
Q 038499 282 RSGQ--TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQV 359 (609)
Q Consensus 282 ~~~~--~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i 359 (609)
.... ....|++++| |.+++...+|++++++++ ++.+.+...++.. .+.+..
T Consensus 278 ~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~i--~~~~~~~~~~~t~-----------------------~~~~~~ 330 (453)
T 4ffc_A 278 FASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRAEL--MDAVYAGGLGGTY-----------------------GGNPVT 330 (453)
T ss_dssp STHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSCTTSSCCSS-----------------------SSCHHH
T ss_pred chhhhcCCCcchHhhh--hhhcCCcCeEEEEECHHH--HhhhcccCcCCCC-----------------------CcCHHH
Confidence 1000 0135777655 999875568999999998 4455433211110 122222
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 360 IQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
.....+++.... +..-.+.+.+....+++.+.+.+..+|.+..... ...++.+.+.. ... .....
T Consensus 331 ~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~---------~~~~~ 395 (453)
T 4ffc_A 331 CAAAVAALGVMR-ELDLPARARAIEASVTSRLSALAEEVDIIGEVRG----RGAMLAIEIVK-PGT---------LEPDA 395 (453)
T ss_dssp HHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEE----ETTEEEEEEBC-TTS---------CCBCH
T ss_pred HHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe----eceEEEEEEec-Ccc---------cCCCH
Confidence 222233343321 1111233333333444444444444565544322 23455554432 100 00000
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.....+.+.|.+ .||.++++.. .++++||++++..|++|+++++++|+
T Consensus 396 ~~~~~~~~~l~~-~Gv~v~~~~~-------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 443 (453)
T 4ffc_A 396 ALTKSIAAEALS-QGVLILTCGT-------------------------------FGNVIRLLPPLVIGDDLLDEGITALS 443 (453)
T ss_dssp HHHHHHHHHHHH-TTEECCEECT-------------------------------TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCEEecCCC-------------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 124567777766 5999985421 13789999999999999999999999
Q ss_pred HHHHhc
Q 038499 520 FIAIYG 525 (609)
Q Consensus 520 ~v~~~~ 525 (609)
++++..
T Consensus 444 ~~l~~~ 449 (453)
T 4ffc_A 444 DIIRAK 449 (453)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 211
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.82 E-value=3e-18 Score=184.57 Aligned_cols=345 Identities=12% Similarity=0.001 Sum_probs=200.9
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
..|+|..++ |..++.|.+++.+.+... .+.... + ......++++.++++++.+.+ +|+|+ +|+++
T Consensus 43 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~-~-----~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg~e 113 (433)
T 1zod_A 43 RAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKL-DHLFSE-M-----LSRPVVDLATRLANITPPGLD-RALLL-STGAE 113 (433)
T ss_dssp CEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHC-CCCCTT-C-----CCHHHHHHHHHHHHHSCTTCC-EEEEE-SCHHH
T ss_pred CEEEEcccchhccccCCCCHHHHHHHHHHHHhC-cccccc-c-----CCHHHHHHHHHHHHhCCCCcC-EEEEe-CchHH
Confidence 358887532 345788999998887543 111111 1 124567788899999998765 89999 55555
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHc-----------CceEEEEecCCC------
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQS-----------LAEVVEIGLDDD------ 213 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~-----------G~~vv~v~~~~~------ 213 (609)
++..+++++. ....++ .|++....||+ ........ ...+..++.+..
T Consensus 114 a~~~a~~~~~-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (433)
T 1zod_A 114 SNEAAIRMAK-------------LVTGKY--EIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFE 178 (433)
T ss_dssp HHHHHHHHHH-------------HHHTCC--EEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCE
T ss_pred HHHHHHHHHH-------------HhhCCC--eEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccC
Confidence 7777766431 012234 45555555544 33333221 123444543221
Q ss_pred ------CCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEecccc-CCcccc--c
Q 038499 214 ------GLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVEI--D 280 (609)
Q Consensus 214 ------g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~-~~~~~i--d 280 (609)
+.+|+++|++++++. ..+++++++++..+|+||.+.+ +++|.++|++||+++|+|++++ ++.... .
T Consensus 179 ~~~~~~~~~d~~~le~~l~~~-~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~ 257 (433)
T 1zod_A 179 RNGAYDYLAELDYAFDLIDRQ-SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFA 257 (433)
T ss_dssp ETTEECHHHHHHHHHHHHHHH-CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST
T ss_pred CchhhhHHHHHHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhH
Confidence 124699999999742 1135678777777788998776 9999999999999999999988 332211 0
Q ss_pred CCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHH
Q 038499 281 VRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVI 360 (609)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~ 360 (609)
+... ....|++ +++|.+|++.++|++++++++. +.+.+... ......+.+.+.
T Consensus 258 ~~~~-~~~~di~--s~sK~~~~G~~ig~~~~~~~~~--~~~~~~~~----------------------~~~~t~~~~~~~ 310 (433)
T 1zod_A 258 CQRD-GVTPDIL--TLSKTLGAGLPLAAIVTSAAIE--ERAHELGY----------------------LFYTTHVSDPLP 310 (433)
T ss_dssp HHHH-TCCCSEE--EECHHHHTTSSCEEEEECHHHH--HHHHHTTC----------------------CCCCTTTTCHHH
T ss_pred Hhhc-CCCCCEE--EecccccCCCCeeEEEEhHHHH--HhhccCCC----------------------CCCCCCCcCHHH
Confidence 0100 0135766 4559998756689999998872 22211000 000001112222
Q ss_pred H-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCC
Q 038499 361 Q-MIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTE 435 (609)
Q Consensus 361 ~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~ 435 (609)
. ...++++.. +.. .+.++.+++++++.+.|++ +|.+....+ ...++++.+.. ...
T Consensus 311 ~~a~~aal~~~--~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~----~g~~~~i~~~~-~~~---------- 370 (433)
T 1zod_A 311 AAVGLRVLDVV--QRD---GLVARANVMGDRLRRGLLDLMERFDCIGDVRG----RGLLLGVEIVK-DRR---------- 370 (433)
T ss_dssp HHHHHHHHHHH--HHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEEEE-ETT----------
T ss_pred HHHHHHHHHHH--HhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE----EEEEEEEEEec-Ccc----------
Confidence 2 223344432 222 2445566666666666654 344433322 23455554432 100
Q ss_pred CC--CCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHH
Q 038499 436 TD--KPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEF 513 (609)
Q Consensus 436 ~~--~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ 513 (609)
.+ .......+.+.|.+ .||.+++|..+. .++++||++++..|++|+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~-----------------------------~~~~lRi~~~~~~t~~~i~~ 420 (433)
T 1zod_A 371 TKEPADGLGAKITRECMN-LGLSMNIVQLPG-----------------------------MGGVFRIAPPLTVSEDEIDL 420 (433)
T ss_dssp TTEECTTHHHHHHHHHHH-TTEECCEECCTT-----------------------------SCCEEEECCCTTCCHHHHHH
T ss_pred ccCCChHHHHHHHHHHHH-CCCeEeccCCCC-----------------------------CCCEEEEECCcCCCHHHHHH
Confidence 00 00125678888865 699998654211 13799999999999999999
Q ss_pred HHHHHHHHHHh
Q 038499 514 TLEALEFIAIY 524 (609)
Q Consensus 514 ll~al~~v~~~ 524 (609)
++++|+++++.
T Consensus 421 ~l~~l~~~l~~ 431 (433)
T 1zod_A 421 GLSLLGQAIER 431 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 212
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=3e-18 Score=186.27 Aligned_cols=363 Identities=12% Similarity=0.042 Sum_probs=211.4
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ .|+|..++ |..++.|.+++.+.+.... .+.. ..........+++++++++++.+
T Consensus 39 ~~G~~~~d~~g~---~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~--~~~~---~~~~~~~~~~~la~~l~~~~~~~ 110 (459)
T 4a6r_A 39 GEGVYLWDSEGN---KIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP--FYNT---FFKTTHPAVVELSSLLAEVTPAG 110 (459)
T ss_dssp EEBTEEEETTCC---EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS--CCCT---TSSSCCHHHHHHHHHHHHHSCTT
T ss_pred eecCEEEECCCC---EEEECCCchhcccCCCCCHHHHHHHHHHHHhcc--cccc---ccccCCHHHHHHHHHHHHhCCCC
Confidence 555666666664 38998754 4557889999988886431 1110 11112455778899999999877
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc-C------------ce
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-L------------AE 204 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G------------~~ 204 (609)
.+ +|+|+++|+. ++..+++++.... . ..-++++. .|++....||+........ + ..
T Consensus 111 ~~-~v~~~~ggse-A~~~al~~~~~~~----~----~~g~~~~~-~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 179 (459)
T 4a6r_A 111 FD-RVFYTNSGSE-SVDTMIRMVRRYW----D----VQGKPEKK-TLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPG 179 (459)
T ss_dssp CC-EEEEESSHHH-HHHHHHHHHHHHH----H----HTTCTTCC-EEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSS
T ss_pred CC-EEEEeCchHH-HHHHHHHHHHHHH----H----hcCCCCCC-EEEEECCCcCCccHHHHhhcCChhhccccCCCCCC
Confidence 66 8999954554 5666655542000 0 00013322 5666665666544332221 1 13
Q ss_pred EEEEecCC-----CCCCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEE
Q 038499 205 VVEIGLDD-----DGLLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (609)
Q Consensus 205 vv~v~~~~-----~g~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vi 267 (609)
+..++... +. +| +++|++++.+.. .+++++++++.+++++|.+.+ +++|.++|++||+++|
T Consensus 180 ~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI 257 (459)
T 4a6r_A 180 MAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG-ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLV 257 (459)
T ss_dssp EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEE
T ss_pred CEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC-CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 44454321 11 34 788998887421 135678888888888899887 9999999999999999
Q ss_pred EeccccC-Cccc--ccCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCC---CCccCCCceEeecccccc
Q 038499 268 FDFAASG-PYVE--IDVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFP---PSTCGGGTVNYVNGFNEK 340 (609)
Q Consensus 268 vD~A~~~-~~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~---p~~~ggg~v~~~~~~~~~ 340 (609)
+|++++. +... ...... ....|++++| |.++|+ ..+|++++++++. +.+. +...+
T Consensus 258 ~DEv~~g~gr~G~~~~~~~~-~~~pdi~t~s--K~l~gg~~~lg~v~~~~~i~--~~~~~~~~~~~~------------- 319 (459)
T 4a6r_A 258 ADEVICGFGRTGEWFGHQHF-GFQPDLFTAA--KGLSSGYLPIGAVFVGKRVA--EGLIAGGDFNHG------------- 319 (459)
T ss_dssp EECTTTTTTTTSSSSHHHHH-TCCCSEEEEC--GGGGTTSSCCEEEEECHHHH--HHHHHHCTTHHH-------------
T ss_pred EeccccCCCcccccchHhhc-CCCCCeeehh--hhhcCCCCCccceeeCHHHH--HHhhcCCCcccC-------------
Confidence 9999773 2221 000000 0145777765 998875 4689999999873 2221 11000
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHhCCCCceEEeCCCCCCCcceEEEEe
Q 038499 341 DTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIK-KQEETYIERALERLLPNQNIKILGNTSTKRQAILSFNI 419 (609)
Q Consensus 341 ~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~-~~~~~l~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~ 419 (609)
....+.|.......+++.... +..-.+.+. ++...+++.+.+.|..+|.+....+ ...++.+.+
T Consensus 320 ----------~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~g~~~~~~~ 384 (459)
T 4a6r_A 320 ----------FTYSGHPVCAAVAHANVAALR-DEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRG----VGMVQAFTL 384 (459)
T ss_dssp ----------HHHCSCHHHHHHHHHHHHHHH-HTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEE----ETTEEEEEE
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE----EEEEEEEEE
Confidence 001122222222233343321 111234444 4445555555566677776655432 234555554
Q ss_pred ccCCCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCC
Q 038499 420 HSSTINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVK 494 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~ 494 (609)
.. ... ....+ ....+++.|.++ ||.++++
T Consensus 385 ~~-~~~----------~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~---------------------------------- 418 (459)
T 4a6r_A 385 VK-NKA----------KRELFPDFGEIGTLCRDIFFRN-NLIMRAC---------------------------------- 418 (459)
T ss_dssp CS-BTT----------TTBCCSSTTHHHHHHHHHHHHT-TEECEEE----------------------------------
T ss_pred ec-Ccc----------ccccccchHHHHHHHHHHHHHC-CeEEecC----------------------------------
Confidence 43 110 00000 145677888764 9998842
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
.+++||++++..|++|+++++++|+++++...
T Consensus 419 g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 419 GDHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 15899999999999999999999999887643
No 213
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.81 E-value=1.1e-19 Score=195.92 Aligned_cols=294 Identities=12% Similarity=0.054 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHhC------CCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH
Q 038499 123 VHEASNYIKKCLG------GGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL 196 (609)
Q Consensus 123 ~~e~r~~ia~~~g------~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (609)
..++|+.|+++++ .+++ +|++| +|+++++..++.++...... ..+++|| .|+++.+.|+.+..
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~-~iv~t-~G~~~al~~~~~~l~~~~~~-------~~~~~Gd--~Vlv~~P~y~~~~~ 170 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDR-YIVFG-VGVTQLIHGLVISLSPNMTA-------TPDAPES--KVVAHAPFYPVFRE 170 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTC-EEEEE-SHHHHHHHHHHHHHSCCTTT-------CTTSCCE--EEEECSSCCHHHHH
T ss_pred hHHHHHHHHHHHHHhCCcCCCCC-EEEEe-CCHHHHHHHHHHHHhhcccc-------ccCCCCC--EEEEeCCCcccHHH
Confidence 3556777777765 4555 89998 89999999998887200000 0026788 79999999999998
Q ss_pred HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 197 SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 197 ~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
.++..|++++... +|+++|+++++ ++++++++++++||||.+.+ + + ++ ++..+.|+++..+.
T Consensus 171 ~~~~~g~~~~~~~------~d~~~l~~~~~-----~~~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~ 232 (427)
T 2hox_A 171 QTKYFDKKGYVWA------GNAANYVNVSN-----PEQYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPH 232 (427)
T ss_dssp HHHHSCBTTEEEE------EEGGGGTTCSC-----GGGEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTT
T ss_pred HHHHcCCeeeeec------CCHHHHHHhhc-----CCceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCC
Confidence 9999999887543 56788887776 47899999999999999999 3 2 33 56788898765322
Q ss_pred ccccCCCCCCCCccEEEEcCCCCCCCCC-CcEEEEEe-chhhccCCCCCCccCCCceEeecccccccccccccccccccC
Q 038499 277 VEIDVRSGQTDGYDAIFLSTHKFLGGPG-SPGILLMT-KALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESG 354 (609)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~L~~~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~ 354 (609)
.. +..+. .+.++++.|+||.+|.|+ .+|+++++ +++ ++.+... ......
T Consensus 233 ~s--~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l--~~~l~~~------------------------~~~~~~ 283 (427)
T 2hox_A 233 YT--PIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESV--YNNLLNY------------------------MTKNTE 283 (427)
T ss_dssp TS--CCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHH--HHHHHHH------------------------HHHHTS
T ss_pred CC--ccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHH--HHHHHHH------------------------HHhcCC
Confidence 11 11111 256899999999998443 38999995 666 2222111 111113
Q ss_pred CChhHHHHHHHHHHHHHHH-----------hcCHHHHHHHHHHHHHHHHHHhCCCCceEE--eC-CCC-------CCCcc
Q 038499 355 GTPQVIQMIRAALAFWVKE-----------YIGHEVIKKQEETYIERALERLLPNQNIKI--LG-NTS-------TKRQA 413 (609)
Q Consensus 355 gtp~i~~~~~aal~~~~~~-----------~~g~~~i~~~~~~l~~~~~~~L~~~p~i~v--~~-~~~-------~~r~~ 413 (609)
+++.+.+.+. +.++... ....+.++++.++.++++.+.|++++++.+ +. +.. .+..+
T Consensus 284 ~~~~~~q~a~--~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g 361 (427)
T 2hox_A 284 GTPRETQLRS--LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSP 361 (427)
T ss_dssp SCCHHHHHHH--HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCC
T ss_pred CCCHHHHHHH--HHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCc
Confidence 4444444321 1111110 112345567778889999999999888876 32 210 12345
Q ss_pred eEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCC
Q 038499 414 ILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGV 493 (609)
Q Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~ 493 (609)
++.|.-.+ . +...+++.|.++.||.+++|..|..
T Consensus 362 ~f~~~~~~-~-----------------~~~~~~~~ll~~~gI~v~pg~~f~~---------------------------- 395 (427)
T 2hox_A 362 SYAWVKCE-W-----------------EEDKDCYQTFQNGRINTQNGVGFEA---------------------------- 395 (427)
T ss_dssp SEEEEEEC-S-----------------GGGCSHHHHHHHTTEECEEGGGGTS----------------------------
T ss_pred eEEEEECC-C-----------------cHHHHHHHHHHHCCEEEcCCCccCC----------------------------
Confidence 55554443 1 2344566665557999999876641
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 494 KPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 494 ~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
.++++|||++ +++++++.+++.|+.++..
T Consensus 396 ~~~~~Ris~~--~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 396 SSRYVRLSLI--KTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp CTTEEEEECS--SCHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEec--CCHHHHHHHHHHHHHHHhh
Confidence 1489999998 4889999999999988743
No 214
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.81 E-value=2.8e-18 Score=184.89 Aligned_cols=335 Identities=15% Similarity=0.075 Sum_probs=191.1
Q ss_pred EEecCCCCC------CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTASG------RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~g------~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|+.++. ..++.|.+++.+.+..... .. + ......+++++++++++ +.+ +|+|+++|+. +
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~--~-----~~~~~~~l~~~la~~~~-~~~-~v~~~~sGse-a 123 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVL--YG--T-----PTALEVKFAKMLKEAMP-ALD-KVRFVNSGTE-A 123 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSC--CS--S-----CCHHHHHHHHHHHHHCT-TCS-EEEEESSHHH-H
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcC--CC--C-----CCHHHHHHHHHHHHhCC-CCC-EEEEeCchHH-H
Confidence 488887653 3578899999888764211 10 1 12345678889999987 444 8999965555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-cCc-------------------eEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ-SLA-------------------EVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-~G~-------------------~vv~v~~~~ 212 (609)
+..++.+.. ...+++ .|++....||+....... .|. ++..++.+
T Consensus 124 ~~~ai~~a~-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (434)
T 3l44_A 124 VMTTIRVAR-------------AYTGRT--KIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN- 187 (434)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTT-
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-
Confidence 665555431 012444 566666666554322211 121 33333332
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccCCCC--CC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDVRSG--QT 286 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~~~~--~~ 286 (609)
|+++|++++++.. +++++++++.++|++|.+.+ +++|.++|++||+++|+|+++... ..-.+... ..
T Consensus 188 ----d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~ 260 (434)
T 3l44_A 188 ----NVETLKEALDKWG--HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLG 260 (434)
T ss_dssp ----CHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHT
T ss_pred ----cHHHHHHHHHhCC--CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcC
Confidence 8999999997431 35778888888888999988 999999999999999999998742 11000000 00
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC--hhHHHH--
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT--PQVIQM-- 362 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt--p~i~~~-- 362 (609)
...|++++| |.+|++.++|++++++++ ++.+.+... ....+| .+.++.
T Consensus 261 ~~~di~t~s--K~~~~G~~iG~~~~~~~i--~~~~~~~~~------------------------~~~~~t~~~~~~a~aa 312 (434)
T 3l44_A 261 VTPDLTALG--KVIGGGLPIGAYGGKKEI--MEQVAPLGP------------------------AYQAGTMAGNPASMAS 312 (434)
T ss_dssp CCCSEEEEE--GGGGTTSSCEEEEECHHH--HTTBTTTSS------------------------BCCCCTTTTCHHHHHH
T ss_pred CCCCeeehh--hhhcCCcCeeeEEEcHHH--HHhhccCCC------------------------cccCCCCCcCHHHHHH
Confidence 135766554 999877779999999988 444432100 000111 122222
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----CCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC
Q 038499 363 IRAALAFWVKEYIGHEVIKKQEETYIERALERLLP----NQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK 438 (609)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~----~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (609)
..+++... +. +.+.++.+++.+++++.|.+ ++.+.... ....++.+.+.. ....+. .......
T Consensus 313 a~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~---~~~~~~~ 379 (434)
T 3l44_A 313 GIACLEVL--QQ---EGLYEKLDELGATLEKGILEQAAKHNIDITLN----RLKGALTVYFTT-NTIEDY---DAAQDTD 379 (434)
T ss_dssp HHHHHHHH--TS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE----EETTEEEEEESS-SCCCSH---HHHHHSC
T ss_pred HHHHHHHH--Hc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE----eeccEEEEEEec-Ccccch---hhccccC
Confidence 22333322 11 34445555555565555543 33222211 123455555432 100000 0000000
Q ss_pred CCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 038499 439 PLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 439 ~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al 518 (609)
......+.+.|.+ .||.++++. .+.+|+++ ..|++|+++++++|
T Consensus 380 ~~~~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~rl~~--~~t~e~i~~~l~~l 423 (434)
T 3l44_A 380 GEMFGKFFKLMLQ-EGVNLAPSK---------------------------------YEAWFLTT--EHTKEDIEYTIEAV 423 (434)
T ss_dssp HHHHHHHHHHHHH-TTEECCSST---------------------------------TCCEECCT--TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCeEEeecC---------------------------------CCcEEEec--ccCHHHHHHHHHHH
Confidence 0112567777766 499998542 24678864 57999999999999
Q ss_pred HHHHHhc
Q 038499 519 EFIAIYG 525 (609)
Q Consensus 519 ~~v~~~~ 525 (609)
+++++..
T Consensus 424 ~~~l~~~ 430 (434)
T 3l44_A 424 GRAFAAL 430 (434)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988754
No 215
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.81 E-value=2.6e-19 Score=191.46 Aligned_cols=293 Identities=11% Similarity=0.075 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHh-CCC-----CCCcEE--EeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch
Q 038499 123 VHEASNYIKKCL-GGG-----QEDAMI--FCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN 194 (609)
Q Consensus 123 ~~e~r~~ia~~~-g~~-----~~~~vi--ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (609)
..++|+.+++++ |.. ++ +|. .+ .|+++++..+..++.. ..++|| .|+++.+.|+++
T Consensus 81 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~~-~~g~ga~~~~~~~~~~------------~~~~gd--~Vlv~~p~y~~~ 144 (409)
T 4eu1_A 81 IASFVEEAQKLCFGPTCAALRDG-RIASCQT-LGGTGALRIGGDLLNR------------FVANCN--RIYGPDVGYPNH 144 (409)
T ss_dssp CHHHHHHHHHHHHCSSCHHHHTT-CEEEEEE-SHHHHHHHHHHHHGGG------------TSSSCC--EEEEESSCCTHH
T ss_pred cHHHHHHHHHHHcCCCchhhccC-ceeeeec-ccchHHHHHHHHHHHH------------hcCCCC--EEEEeCCCcHhH
Confidence 356788888876 654 34 674 36 6777777766544321 136788 699999999999
Q ss_pred HHHHHHcCceEEEEecC--CCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHH---HHHHHHHHhCCeEEEe
Q 038499 195 LLSWRQSLAEVVEIGLD--DDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFD 269 (609)
Q Consensus 195 ~~~~~~~G~~vv~v~~~--~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~---~I~~la~~~g~~vivD 269 (609)
...++..|++++.++++ +++.+|+++|++++++. .++++++++++++||||.+.+.+ +|+++|++||+++|+|
T Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 222 (409)
T 4eu1_A 145 ESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKA--PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVD 222 (409)
T ss_dssp HHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHS--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhC--CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 99999999999999973 46789999999999742 13567888899999999998855 5999999999999999
Q ss_pred ccccCCc-cc-----ccCCCC-CCCCccEEEEcCCCCCCCCC-CcEEE--EEe-ch----hhccCCCCCCccCCCceEee
Q 038499 270 FAASGPY-VE-----IDVRSG-QTDGYDAIFLSTHKFLGGPG-SPGIL--LMT-KA----LYQLGSFPPSTCGGGTVNYV 334 (609)
Q Consensus 270 ~A~~~~~-~~-----id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~L--~~~-~~----~~~l~~~~p~~~ggg~v~~~ 334 (609)
++++... .. ..+... ......+++.|++|.+|.|+ ++|++ ++. ++ + +..+...
T Consensus 223 e~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l--~~~~~~~---------- 290 (409)
T 4eu1_A 223 MAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRL--VSQLALL---------- 290 (409)
T ss_dssp ESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHH--HHHHHHH----------
T ss_pred ccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHH--HHHHHHH----------
Confidence 9966432 11 111100 01123477889999998543 48997 554 44 3 1111000
Q ss_pred cccccccccccccccccccCCChhHHHHH-HHHHHHH-H-HH-hcCHHHHHHHHHHHHHHHHHHhCCCC--c-eEEeCCC
Q 038499 335 NGFNEKDTLYLEDIEERESGGTPQVIQMI-RAALAFW-V-KE-YIGHEVIKKQEETYIERALERLLPNQ--N-IKILGNT 407 (609)
Q Consensus 335 ~~~~~~~~~~~~~~~~r~~~gtp~i~~~~-~aal~~~-~-~~-~~g~~~i~~~~~~l~~~~~~~L~~~p--~-i~v~~~~ 407 (609)
......+.+.+.+.+ .+++.-. + .+ ....+.++++.+++++++.+.|++++ + +++..+
T Consensus 291 --------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~- 355 (409)
T 4eu1_A 291 --------------IRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIER- 355 (409)
T ss_dssp --------------HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-
T ss_pred --------------HhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecC-
Confidence 001112222333322 1122100 0 00 11245677788888889999887652 1 444433
Q ss_pred CCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHh
Q 038499 408 STKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQ 487 (609)
Q Consensus 408 ~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~ 487 (609)
..+++.|. . +.... +..|.+++||.+.+|
T Consensus 356 ---~~~~~~~~--~------------------~~~~~-~~~ll~~~gv~v~p~--------------------------- 384 (409)
T 4eu1_A 356 ---QVGMMAYT--G------------------LTREQ-VELLRSEYHIYMTLN--------------------------- 384 (409)
T ss_dssp ---SCSSEEEC--C------------------CCHHH-HHHHHHHHCEECCTT---------------------------
T ss_pred ---CceEEEEe--C------------------CCHHH-HHHHHHcCCEEEcCC---------------------------
Confidence 23455542 2 23344 555556679988732
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 038499 488 KGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIA 522 (609)
Q Consensus 488 ~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~ 522 (609)
.||+++. .+++|+++++++|++++
T Consensus 385 ----------~Ri~~~~-~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 385 ----------GRAAVSG-LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp ----------CEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred ----------CEEEEEe-cCHhhHHHHHHHHHHHh
Confidence 3888864 45677999999998875
No 216
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.81 E-value=1.4e-18 Score=192.69 Aligned_cols=156 Identities=15% Similarity=0.057 Sum_probs=117.4
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH--cCceEEEEecCCC--CC
Q 038499 140 DAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ--SLAEVVEIGLDDD--GL 215 (609)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~--~G~~vv~v~~~~~--g~ 215 (609)
++|++| +|+++++..++.++... ..+++|| .|+++.+.|+.+...... .|++++.++.+++ +.
T Consensus 166 ~~I~~t-~G~~eal~~~~~~l~~~----------~l~~~Gd--~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 232 (546)
T 2zy4_A 166 VNLFAV-EGGTAAMAYIFESLKLN----------GLLKAGD--KVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQ 232 (546)
T ss_dssp EEEEEE-EHHHHHHHHHHHHHHHT----------TSSCTTC--EEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTB
T ss_pred ceEEEE-CCHHHHHHHHHHHhhhh----------hcCCCCC--EEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCC
Confidence 489888 89999999988764100 0036888 699999999988876543 4789999998753 46
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecccCccccccCH---HHHHHHH--HHhCCeEEEeccccCCcc-cccCCCCCCCCc
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDT---RSIARLL--HQYGGFACFDFAASGPYV-EIDVRSGQTDGY 289 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl---~~I~~la--~~~g~~vivD~A~~~~~~-~id~~~~~~~~~ 289 (609)
+|+++|++++. ++++++++++++||||.+.+. ++|+++| ++||+++|+|++++.... ...+... ..+.
T Consensus 233 ~d~~~l~~~~~-----~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~ 306 (546)
T 2zy4_A 233 YPDSELDKLKD-----PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPEN 306 (546)
T ss_dssp CCHHHHGGGGS-----TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGG
T ss_pred CCHHHHHHhhC-----CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCC
Confidence 89999988775 689999999999999999884 5578888 789999999999874321 1111111 0145
Q ss_pred cEEEEcCCCCCCCCC-CcEEEEEech
Q 038499 290 DAIFLSTHKFLGGPG-SPGILLMTKA 314 (609)
Q Consensus 290 D~v~~S~hK~lggp~-g~G~L~~~~~ 314 (609)
++++.|++|++|.|+ .+|+++++++
T Consensus 307 ~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 307 TLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp EEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred EEEEEeCccccCCCCcceEEEEECCH
Confidence 788999999997443 4899999886
No 217
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.80 E-value=1.2e-17 Score=182.28 Aligned_cols=358 Identities=12% Similarity=0.037 Sum_probs=206.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|+ -|+|..++ |..++.|.+++.+++.... .+.. ..........+++++++++++.+
T Consensus 44 ~~G~~l~d~~G~---~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~---~~~~~~~~~~~lae~l~~~~~~~ 115 (472)
T 3hmu_A 44 ARGVWLNDSEGE---EILDAMAGLWCVNIGYGRDELAEVAARQMRELP--YYNT---FFKTTHVPAIALAQKLAELAPGD 115 (472)
T ss_dssp EEBTEEEETTCC---EEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS--CCCS---SSSEECHHHHHHHHHHHHHSCTT
T ss_pred eecCEEEECCCC---EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--cccc---ccccCCHHHHHHHHHHHHhCCCC
Confidence 344445444453 48998753 5567899999998886532 1111 01112345678889999999876
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHc-Cc-----------eE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQS-LA-----------EV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G~-----------~v 205 (609)
.+ .|+|+++|+. ++..+++++-. . . ...-++++. .|++....||......... +. .+
T Consensus 116 ~~-~v~~~~sGse-A~~~aik~a~~-~------~-~~~g~~~~~-~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~ 184 (472)
T 3hmu_A 116 LN-HVFFAGGGSE-ANDTNIRMVRT-Y------W-QNKGQPEKT-VIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDV 184 (472)
T ss_dssp EE-EEEEESSHHH-HHHHHHHHHHH-H------H-HHTTCTTCC-EEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSE
T ss_pred CC-EEEEeCCHHH-HHHHHHHHHHH-H------H-HhcCCCCCC-EEEEEcCcCCCccHHhhhccCChhhccccCCCCCc
Confidence 65 8999965655 55555554310 0 0 000013333 4555555555544333222 21 34
Q ss_pred EEEecCC-----CCCCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 206 VEIGLDD-----DGLLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 206 v~v~~~~-----~g~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
+.++... ++ .| +++|+++|++.. .+++++++++.+++++|.+.+ +++|.++|++||+++|+
T Consensus 185 ~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~-~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~ 262 (472)
T 3hmu_A 185 HHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG-ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIA 262 (472)
T ss_dssp EEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred EEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC-CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 5555322 11 34 788988886421 135778889889999999987 99999999999999999
Q ss_pred eccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCC--CccCCCceEeecccccccc
Q 038499 269 DFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPP--STCGGGTVNYVNGFNEKDT 342 (609)
Q Consensus 269 D~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p--~~~ggg~v~~~~~~~~~~~ 342 (609)
|++++. +.... ..... .-..|++++| |.++|. ..+|++++++++. +.+.+ ...++ +
T Consensus 263 DEv~~gfgr~G~~~a~~~~-~v~pdi~t~s--K~l~gg~~plG~v~~~~~i~--~~~~~~~~~~~~-t------------ 324 (472)
T 3hmu_A 263 DEVICGFGRTGNWFGTQTM-GIRPHIMTIA--KGLSSGYAPIGGSIVCDEVA--HVIGKDEFNHGY-T------------ 324 (472)
T ss_dssp ECTTTTTTTTSSSCHHHHH-TCCCSEEEEC--GGGTTTSSCCEEEEEEHHHH--HHHTTSCBCCCC-T------------
T ss_pred EccccCCcccCccchhHHh-CCCCceeeec--hhhhcCCcceEEEEECHHHH--HhcccCCccccC-C------------
Confidence 999873 22210 00000 0145888765 999876 3689999999883 23211 11110 0
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHhC---CCCceEEeCCCCCCCcceEEEE
Q 038499 343 LYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEE-TYIERALERLL---PNQNIKILGNTSTKRQAILSFN 418 (609)
Q Consensus 343 ~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~-~l~~~~~~~L~---~~p~i~v~~~~~~~r~~~~~f~ 418 (609)
..+.|.......+++... +. +.+.++.+ ++.+++++.|+ .+|.+..+.+ ...++.+.
T Consensus 325 ----------~~~np~a~aAa~aaL~~~--~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~----~G~~~~i~ 385 (472)
T 3hmu_A 325 ----------YSGHPVAAAVALENLRIL--EE---ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKI----VGMMASIA 385 (472)
T ss_dssp ----------TTTCHHHHHHHHHHHHHH--HH---TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEE----ETTEEEEE
T ss_pred ----------CCCCHHHHHHHHHHHHHH--HH---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe----cCceEEEE
Confidence 012222222223334332 21 23344444 55555555553 3455543322 23455555
Q ss_pred eccCCCCCcCCCCCCCCCCCCC------ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCC
Q 038499 419 IHSSTINSSLGENTKTETDKPL------HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVG 492 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l------~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~ 492 (609)
+.. ... ..... ....+++.|.+ .||.++++
T Consensus 386 ~~~-~~~----------~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-------------------------------- 421 (472)
T 3hmu_A 386 LTP-NKA----------SRAKFASEPGTIGYICRERCFA-NNLIMRHV-------------------------------- 421 (472)
T ss_dssp ECS-CGG----------GTCCBSSCTTHHHHHHHHHHHH-TTBCCEEE--------------------------------
T ss_pred Eec-Ccc----------ccccccchhHHHHHHHHHHHHH-CCcEEEec--------------------------------
Confidence 543 110 00000 14567787866 49988842
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 493 VKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 493 ~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+++||++++..|++|+++++++|+++++..
T Consensus 422 --g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 422 --GDRMIISPPLVITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1689999999999999999999999988654
No 218
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.80 E-value=1.6e-18 Score=186.63 Aligned_cols=335 Identities=12% Similarity=0.022 Sum_probs=193.3
Q ss_pred EEecCCCCC------CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTASG------RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~g------~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|+.++. ..++.|.+++.+.+..... . +. ......++++.++++++ +.+ +|+|+++|+. +
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~--~~----~~~~~~~l~~~la~~~~-~~~-~v~~~~~Gse-a 121 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTS---F--GA----PTEIENKLAKLVIERVP-SIE-IVRMVNSGTE-A 121 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSC---C--SS----CCHHHHHHHHHHHHHST-TCS-EEEEESSHHH-H
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcC---c--CC----CCHHHHHHHHHHHHhCC-CCC-EEEEeCChHH-H
Confidence 489988653 3588999999888764311 1 01 12346678889999987 444 8999965555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc-hHHHHHHcCc-------------------eEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS-NLLSWRQSLA-------------------EVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s-~~~~~~~~G~-------------------~vv~v~~~~ 212 (609)
+..++.+.. ...+++ .|++.+..||+ ........|. +++.++.+
T Consensus 122 ~~~ai~~a~-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (429)
T 3k28_A 122 TMSALRLAR-------------GYTGRN--KILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN- 185 (429)
T ss_dssp HHHHHHHHH-------------HHHTCC--EEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT-
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC-
Confidence 555554431 012334 45554444443 3222222222 23333332
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccC---CCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDV---RSGQ 285 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~---~~~~ 285 (609)
|+++|+++++++. +++++++++.++|++|.+.+ +++|.++|++||+++|+|+++..- ..-.+ ...
T Consensus 186 ----d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~- 257 (429)
T 3k28_A 186 ----DLESVKYAFEQFG--DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYY- 257 (429)
T ss_dssp ----CHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHH-
T ss_pred ----CHHHHHHHHHhCC--CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHh-
Confidence 8999999997431 35778888888888999988 999999999999999999998632 11000 000
Q ss_pred CCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC--hhHHHHH
Q 038499 286 TDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT--PQVIQMI 363 (609)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt--p~i~~~~ 363 (609)
....|++++ +|.+|++..+|++++++++ ++.+.+.. .....+| .+.++.
T Consensus 258 ~~~~di~t~--sK~~~~G~~iG~~~~~~~~--~~~~~~~~------------------------~~~~~~t~~~~~~a~- 308 (429)
T 3k28_A 258 GVTPDLTCL--GKVIGGGLPVGAYGGKAEI--MRQVAPSG------------------------PIYQAGTLSGNPLAM- 308 (429)
T ss_dssp TCCCSEEEE--CGGGGTTSCCEEEEECHHH--HTTBTTTS------------------------SBCCCCTTTTCHHHH-
T ss_pred CCCCceehh--hhhhcCCCCeEEEEEcHHH--HhhhccCC------------------------CccccCCCCCChHHH-
Confidence 013577655 5999876678999999988 44443210 0001112 222222
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCC
Q 038499 364 RAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKP 439 (609)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
.++++.+ +... +.+.++.+++++++.+.|.++ +.+.... ....++.+.+.. ....+. ..-.....
T Consensus 309 aaa~aal--~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~---~~~~~~~~ 377 (429)
T 3k28_A 309 AAGYETL--VQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHIN----RAGSMIGIFFTD-EPVINY---DAAKSSNL 377 (429)
T ss_dssp HHHHHHH--HTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE----EETTEEEEESSS-SCCCSH---HHHTTSCH
T ss_pred HHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEE----eeccEEEEEEec-CCcccc---cccccccH
Confidence 2222221 2222 667777777777777777543 3221111 122444454432 100000 00000000
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.....+.+.|.+ .||.++++. .+.+|+++ ..|++|+++++++|+
T Consensus 378 ~~~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~r~~~--~~t~e~i~~~l~~l~ 421 (429)
T 3k28_A 378 QFFAAYYREMVE-QGVFLPPSQ---------------------------------FEGLFLST--VHSDADIEATIAAAE 421 (429)
T ss_dssp HHHHHHHHHHHH-TTEECCSST---------------------------------TSCBCCCT--TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCeEEecCC---------------------------------CCCEEEEC--CCCHHHHHHHHHHHH
Confidence 113567777766 599988541 25578764 579999999999999
Q ss_pred HHHHhc
Q 038499 520 FIAIYG 525 (609)
Q Consensus 520 ~v~~~~ 525 (609)
++++..
T Consensus 422 ~~l~~~ 427 (429)
T 3k28_A 422 IAMSKL 427 (429)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 988754
No 219
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.80 E-value=3.9e-19 Score=189.67 Aligned_cols=338 Identities=12% Similarity=0.063 Sum_probs=202.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccc
Q 038499 115 VGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHS 193 (609)
Q Consensus 115 ~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s 193 (609)
.+.......+.+..++.+++|.+.....+++ +|+|+ ++.+++.+.. +. ..+++ .|+++...|.|
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~~~~lV-~GaT~~~~a~~L~aar--------~~----~~~~~--~viv~r~aHkS 156 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVASCFVV-PMATGMSLTLCFLTLR--------HK----RPKAK--YIIWPRIDQKS 156 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE-SSCHHHHHHHHHHHHH--------HH----CTTCC--EEEEECCCCHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCceEEEE-CCHHHHHHHHHHHHcc--------hh----hcCCC--EEEEECCcHHH
Confidence 3444567788899999999999866555777 66664 3333333321 10 12254 68888999999
Q ss_pred hHHHHHHcCceEEEEec---CCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEec
Q 038499 194 NLLSWRQSLAEVVEIGL---DDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 194 ~~~~~~~~G~~vv~v~~---~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~ 270 (609)
...++...|+.++.|+. ++.+.+|+++|+++|+++.. +.+.+|+.+..++.+|.+.|+++|+++||+||++++||+
T Consensus 157 v~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~-~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~ 235 (450)
T 3bc8_A 157 CFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGP-EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNN 235 (450)
T ss_dssp HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCG-GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCC-CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEEC
Confidence 99999999999988865 45678999999999986521 234455555555556799999999999999999999999
Q ss_pred cccCCccccc-C--CCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccc
Q 038499 271 AASGPYVEID-V--RSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLED 347 (609)
Q Consensus 271 A~~~~~~~id-~--~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (609)
||++-...+. + ..+...++|+++.|+|||++.|.+.+++++++... ++.....+.|.
T Consensus 236 A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~-~~~~~~~~~g~------------------- 295 (450)
T 3bc8_A 236 AYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPF-IQDISKMYPGR------------------- 295 (450)
T ss_dssp TTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHH-HHHHHHHSCSC-------------------
T ss_pred CCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHH-HHHHHHHhhcC-------------------
Confidence 9886432211 0 00001378999999999999999989999865431 22211111110
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcce-EEEEeccCC
Q 038499 348 IEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAI-LSFNIHSST 423 (609)
Q Consensus 348 ~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~-~~f~~~~~~ 423 (609)
..++|. +...+.-+.+ ...+++.+.++..++++++.+.|++++ ++++++.. ..++ ..+.+.. -
T Consensus 296 -----~s~Sps-L~l~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~---~~~~~~~~~l~~-~ 362 (450)
T 3bc8_A 296 -----ASASPS-LDVLITLLSL---GCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTP---HNPISLAMTLKT-I 362 (450)
T ss_dssp -----BCSHHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCT---TCSSEEEEECTT-T
T ss_pred -----CcccHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCc---cCCCcceeeccc-c
Confidence 112232 1111111111 233556666677888899999998887 88888753 1121 1121111 0
Q ss_pred CCCcCCCCCCCCCCCCCChHHHHHHHhhh--cCcEecc-CcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEE
Q 038499 424 INSSLGENTKTETDKPLHGPFVATLLNDL--FGIQARG-GCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRI 500 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~--~GI~v~~-G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRl 500 (609)
. .....+...+.-.+... -|..+.+ |.. ..-.++.|.+.+.. .+.....++=+
T Consensus 363 ~-----------~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~-~~~~~~~l~~~gi~------------~E~~~~~~i~~ 418 (450)
T 3bc8_A 363 D-----------GHHDKAVTQLGSMLFTRQVSGARAVPLGNV-QTVSGHTFRGFMSH------------ADNYPCAYLNA 418 (450)
T ss_dssp S-----------SSSSCHHHHHHHHHHHTTCCSCEEECSCCE-EEETTEEEETTTTT------------SSCCSSCEEEE
T ss_pred c-----------ccccCCCceeEEEecCCCCccceeeecccc-cchhHHHHHHcCCe------------eecCCCCcEEE
Confidence 0 00002233343333221 1222220 000 00000111100000 01123578888
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 501 SFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 501 s~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.++..++++|+++++++|+++....
T Consensus 419 ~~sig~~~~di~~l~~~L~~~~~~~ 443 (450)
T 3bc8_A 419 AAAIGMKMQDVDLFIKRLDKCLNIV 443 (450)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999987543
No 220
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.80 E-value=2.2e-17 Score=180.32 Aligned_cols=368 Identities=11% Similarity=0.034 Sum_probs=208.7
Q ss_pred CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC
Q 038499 65 KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQ 138 (609)
Q Consensus 65 ~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~ 138 (609)
.+.++.+..|+ -|+|..++ |..++.|.+++.+.+....... . . ........++.++++++++.+.
T Consensus 44 ~G~~~~d~~G~---~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~---~--~~~~~~~~~la~~l~~~~~~~~ 114 (476)
T 3i5t_A 44 EGIYVHTEDGR---RLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYAS-P---W--YMATSPAARLAEKIATLTPGDL 114 (476)
T ss_dssp EBTEEEETTCC---EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCC-T---T--TCBCHHHHHHHHHHHTTSSTTC
T ss_pred ecCEEEECCCC---EEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc-c---C--ccCCHHHHHHHHHHHhcCCCCc
Confidence 34444444453 38887644 5568899999998886531101 0 0 1224567788899999987666
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC------------ceE
Q 038499 139 EDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL------------AEV 205 (609)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G------------~~v 205 (609)
+ .|+|+++|+.+ +..+++++-.. ....-++++. .|++....||+... .....| ..+
T Consensus 115 ~-~v~~~~sGseA-~~~Aik~a~~~--------~~~~g~~~~~-~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
T 3i5t_A 115 N-RIFFTTGGSTA-VDSALRFSEFY--------NNVLGRPQKK-RIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRI 183 (476)
T ss_dssp C-EEEEESSHHHH-HHHHHHHHHHH--------HHHTTCTTCC-EEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTE
T ss_pred C-EEEEeCchHHH-HHHHHHHHHHH--------HHhcCCCCCC-EEEEEcCCcCcCChhhccccCChhhccccCCCCCCc
Confidence 5 89999666664 55554443100 0000013333 45555555554443 332222 123
Q ss_pred EEEecCC--CC-CCC--------HHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEec
Q 038499 206 VEIGLDD--DG-LLD--------IEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (609)
Q Consensus 206 v~v~~~~--~g-~ld--------~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~ 270 (609)
..++... .+ ..| +++|++++++.. .+++++++++.++|++|.+.+ +++|.++|++||+++|+|+
T Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~-~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DE 262 (476)
T 3i5t_A 184 SFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG-PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDE 262 (476)
T ss_dssp EEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred EEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 3443221 11 112 789999887421 135789999999999998766 8999999999999999999
Q ss_pred cccC-Cccc--ccCC-CCCCCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccc
Q 038499 271 AASG-PYVE--IDVR-SGQTDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYL 345 (609)
Q Consensus 271 A~~~-~~~~--id~~-~~~~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (609)
+++. +... ..+. ... -..|++++| |.++|. ..+|++++++++ .+.+.+.....+. +.
T Consensus 263 v~~g~gr~G~~~~~~~~~~-v~pdi~t~s--K~l~~G~~plg~v~~~~~i--~~~~~~~~~~~~~--~~----------- 324 (476)
T 3i5t_A 263 VVTGFGRCGEWFASEKVFG-VVPDIITFA--KGVTSGYVPLGGLAISEAV--LARISGENAKGSW--FT----------- 324 (476)
T ss_dssp TTTTTTTTSSSCHHHHTTC-CCCSEEEEC--GGGGTTSSCCEEEEECHHH--HHTTSGGGCTTCE--EC-----------
T ss_pred cccCCccccCceeeecccC-CCcchhhhh--hhhcCCCcCeEEEEECHHH--HHHHhcCCccccc--cc-----------
Confidence 9873 2221 1111 110 145888765 999876 568999999988 3344321000000 00
Q ss_pred ccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC---CCceEEeCCCCCCCcceEEEEeccC
Q 038499 346 EDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP---NQNIKILGNTSTKRQAILSFNIHSS 422 (609)
Q Consensus 346 ~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~---~p~i~v~~~~~~~r~~~~~f~~~~~ 422 (609)
......+.|.......+++... +. +.+.++.+++.+++++.|+. +|.+....+ ...++.+.+..
T Consensus 325 ---~~~t~~~np~a~aAa~aaL~~~--~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~----~G~~~~i~~~~- 391 (476)
T 3i5t_A 325 ---NGYTYSNQPVACAAALANIELM--ER---EGIVDQAREMADYFAAALASLRDLPGVAETRS----VGLVGCVQCLL- 391 (476)
T ss_dssp ---CCCTTTTCHHHHHHHHHHHHHH--HH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEE----ETTEEEEEECC-
T ss_pred ---ccCCCCcCHHHHHHHHHHHHHH--Hh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe----cCceeEEEEec-
Confidence 0000122232222223344332 21 33455666666666666654 454543322 23444554443
Q ss_pred CCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcE
Q 038499 423 TINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGW 497 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~ 497 (609)
... ..... ....+++.|.++ ||.+++. .++
T Consensus 392 ~~~----------~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~----------------------------------g~~ 426 (476)
T 3i5t_A 392 DPT----------RADGTAEDKAFTLKIDERCFEL-GLIVRPL----------------------------------GDL 426 (476)
T ss_dssp C---------------CCHHHHHHHHHHHHHHHHT-TEECEEE----------------------------------TTE
T ss_pred Ccc----------ccccccchhHHHHHHHHHHHHC-CCEEEec----------------------------------CCE
Confidence 110 00001 145677777664 9988731 268
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhccccc
Q 038499 498 TRISFPYYMSNEEFEFTLEALEFIAIYGQRFL 529 (609)
Q Consensus 498 iRls~~~~~t~eeid~ll~al~~v~~~~~~~~ 529 (609)
+||++++..|++|+++++++|+++++...+.+
T Consensus 427 iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 427 CVISPPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987765544
No 221
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.79 E-value=3.8e-18 Score=183.48 Aligned_cols=203 Identities=11% Similarity=0.083 Sum_probs=131.2
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|..++ |..++.|.+++.+.+.... +.. + ......+++++++++++ +++ +|+|++ |.+++
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~-~-----~~~~~~~la~~l~~~~~-~~~-~v~~~~-ggsea 120 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT---SFG-A-----PCALENVLAEMVNDAVP-SIE-MVRFVN-SGTEA 120 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS---CCS-S-----CCHHHHHHHHHHHHHST-TCS-EEEEES-SHHHH
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC---CcC-C-----CCHHHHHHHHHHHHhCC-CCC-EEEEeC-CHHHH
Confidence 48888755 2358899999988886431 110 1 23557788899999998 444 899995 44556
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-HHcC-------------------ceEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-RQSL-------------------AEVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-~~~G-------------------~~vv~v~~~~ 212 (609)
+..++.+.. ....++ .|++....||+..... ...+ ..+..++.+
T Consensus 121 ~~~al~~a~-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 184 (427)
T 3fq8_A 121 CMAVLRIMR-------------AYTGRD--KIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN- 184 (427)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-
Confidence 666654321 012233 3555444555422111 1111 124445443
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcc----cccCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYV----EIDVRSG 284 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~----~id~~~~ 284 (609)
|+++|+++++++ .+++++++++.++|++|.+.+ +++|.++|++||+++|+|++++.-.. ..+...
T Consensus 185 ----d~~~le~~l~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~- 257 (427)
T 3fq8_A 185 ----DLEAVKALFAEN--PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFG- 257 (427)
T ss_dssp ----CHHHHHHHHHHS--TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTT-
T ss_pred ----CHHHHHHHHHhC--CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcC-
Confidence 899999999852 136789999999999999999 99999999999999999999872200 011111
Q ss_pred CCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 285 QTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
...|++++| |.+++...+|++++++++ ++.+.
T Consensus 258 --~~~di~t~s--K~~~~G~~~G~~~~~~~~--~~~~~ 289 (427)
T 3fq8_A 258 --VTPDLTTLG--KIIGGGLPVGAYGGKREI--MQLVA 289 (427)
T ss_dssp --CCCSEEEEC--GGGGTTSSCEEEEECHHH--HTTBT
T ss_pred --CCCChhhhh--hhhhCCcceEEEEEcHHH--HHhhc
Confidence 135776555 999854458999999988 44443
No 222
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.78 E-value=2.7e-18 Score=184.80 Aligned_cols=193 Identities=13% Similarity=0.013 Sum_probs=140.9
Q ss_pred HHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccchhhH
Q 038499 91 RYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQED-AMIFCGSGTTAAIKRLQEVMGIAVPSIL 168 (609)
Q Consensus 91 ~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~ 168 (609)
..|.+++.+..... ..+..++ +..+. ..++++++.+++++|.+... +++|+ +|+ +++..++..+
T Consensus 38 ~~vl~A~~~~~~~~~~~~~~~g-~~y~~---~~~~~l~~~la~~~g~~~~~~~i~~~-sGt-~Ai~~al~al-------- 103 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTG-YGYDD---IGRDTLEKVYADVFGAEAGLVRPQII-SGT-HAISTALFGI-------- 103 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCT-TCCSC---HHHHHHHHHHHHHTTCSEECCBTTSC-SHH-HHHHHHHHTT--------
T ss_pred HHHHHHHHHhchhhhhcCCCCC-CCCCh---hhHHHHHHHHHHHhCCCcccccceee-CHH-HHHHHHHHHh--------
Confidence 46777776653321 1122221 22221 23778999999999987441 22355 775 5677766554
Q ss_pred HHHHHhhhcCCCceEEEECC-CCccchHHHH----------HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEE
Q 038499 169 REKLIKCLRDEERWVVFVGP-HEHHSNLLSW----------RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILG 237 (609)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~~~----------~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv 237 (609)
+++|| .|++.. ..|.+....+ +..|++++.++.++++.+|+++|+++++ +++++|
T Consensus 104 -------~~~Gd--~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~-----~~tk~V 169 (431)
T 3ht4_A 104 -------LRPGD--ELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH-----SNTKMI 169 (431)
T ss_dssp -------CCTTC--EEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC-----TTEEEE
T ss_pred -------CCCCC--EEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC-----CCCeEE
Confidence 47898 688887 7888776544 3479999999998889999999999998 689999
Q ss_pred EEec----ccCccccccCHHHHHHHHHH--hCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCC---CCCcEE
Q 038499 238 SFSA----CSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGG---PGSPGI 308 (609)
Q Consensus 238 ~~s~----~sn~TG~~~dl~~I~~la~~--~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lgg---p~g~G~ 308 (609)
++++ +++++|.+.|+++|+++|++ +|+++++|++++.+....+.... ++|+++.|+||++|| |.| |+
T Consensus 170 ~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~---g~Di~~~S~sK~lgg~~~~~G-G~ 245 (431)
T 3ht4_A 170 GIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHV---GADLMAGSLIKNPGGGIVKTG-GY 245 (431)
T ss_dssp EEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGT---TCSEEEEETTSGGGTTTCSSC-EE
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcccc---CCeEEEcCccccCCCCCCCce-EE
Confidence 9996 44555556778999999999 99999999998877543322222 689999999999887 566 99
Q ss_pred EEEechh
Q 038499 309 LLMTKAL 315 (609)
Q Consensus 309 L~~~~~~ 315 (609)
+++++++
T Consensus 246 v~~~~~l 252 (431)
T 3ht4_A 246 IVGKEQY 252 (431)
T ss_dssp EEECHHH
T ss_pred EEecHHH
Confidence 9999887
No 223
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.78 E-value=6.1e-18 Score=177.31 Aligned_cols=356 Identities=16% Similarity=0.160 Sum_probs=212.9
Q ss_pred CCChHHHHHHHHHhhcCCccCCCCC-CchhhHHHH-HHHHHHHHHHHHHhCCCCCC---cEEEeCChHHHHHHHHHHHhc
Q 038499 87 GRSLRYIENYIINNVLPFYGNTHTC-DSYVGQHTT-NMVHEASNYIKKCLGGGQED---AMIFCGSGTTAAIKRLQEVMG 161 (609)
Q Consensus 87 g~~~~~v~~ai~~~~~~~~~n~~~~-~~~~~~~~~-~~~~e~r~~ia~~~g~~~~~---~vift~sGttaal~~l~~~l~ 161 (609)
....+.|++++-..+...|+....+ .|+.|.... +...-++++.+++||++... +| -.-||+.+++......
T Consensus 64 N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNV-QP~SGs~AN~avy~Al-- 140 (490)
T 3ou5_A 64 NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNV-QPYSGSPANLAVYTAL-- 140 (490)
T ss_dssp CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEEC-CCSSHHHHHHHHHHHH--
T ss_pred CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCC-CcCCHHHHHHHHHHHH--
Confidence 3567789999888887777543322 244555544 44555778899999998652 23 3348999877666544
Q ss_pred ccchhhHHHHHHhhhcCCCceEEEECCCCccchHHH--------HHHcCc--eEEEEecCC-CCCCCHHHHHHHHhhhcc
Q 038499 162 IAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLS--------WRQSLA--EVVEIGLDD-DGLLDIEALRSKLELYKD 230 (609)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--------~~~~G~--~vv~v~~~~-~g~ld~e~L~~al~~~~~ 230 (609)
++|||+ |+..+..|.+.+.- ....|. +++.+++++ ++.+|.+++++...+
T Consensus 141 --------------l~PGD~--ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~--- 201 (490)
T 3ou5_A 141 --------------LQPHDR--IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL--- 201 (490)
T ss_dssp --------------CC-CCC--EECBC----------------------------CBCEETTTTEECHHHHHHHHHH---
T ss_pred --------------cCCCCE--EEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhh---
Confidence 489994 88888777665421 122232 455556664 689999999999887
Q ss_pred CCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCCCccEEEEcCCCCCCCCCCcEEEE
Q 038499 231 AKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTDGYDAIFLSTHKFLGGPGSPGILL 310 (609)
Q Consensus 231 ~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~L~ 310 (609)
.+|++|++-....+ ...|.+++.++|++.|+++++|.||..|.+.-.+.+-....+|++++|.||.|.||.| |+++
T Consensus 202 -~kPklIi~G~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrG-G~Il 277 (490)
T 3ou5_A 202 -FRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIF 277 (490)
T ss_dssp -HCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSC-EEEE
T ss_pred -cCCCeEEECCccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCc-eEEE
Confidence 58999887654443 6789999999999999999999998765443333332234689999999999999997 9999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccc---cCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERE---SGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETY 387 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~---~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (609)
.+++... ..+- .+... ...+.+.+.... ..|.|-...+.+.+++|............++..++
T Consensus 278 ~~~~~~~---~~~k--~~~~~---------~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~N 343 (490)
T 3ou5_A 278 YRKGVKA---VDPK--TGREI---------PYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKN 343 (490)
T ss_dssp EECSEEE---ECC----CCEE---------ECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred ecccccc---cccc--ccchh---------HHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 9886510 0000 00000 001111111111 12334333333334444321222356677788888
Q ss_pred HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChh
Q 038499 388 IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPY 467 (609)
Q Consensus 388 ~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~ 467 (609)
++.+.+.|.+. |++|+.... ....+.+.+.+ . .+++..+.+.| ++.||.+.--. -|.
T Consensus 344 AkaLA~~L~~~-G~~vvsGgT--dnHlvLvDl~~-~---------------g~tG~~ae~~L-e~agItvNkN~---iP~ 400 (490)
T 3ou5_A 344 ARAMADALLER-GYSLVSGGT--DNHLVLVDLRP-K---------------GLDGARAERVL-ELVSITANKNT---CPG 400 (490)
T ss_dssp HHHHHHHHHHT-TCEEGGGSC--SSSEEEEECGG-G---------------TCCHHHHHHHH-HHTTEECEEEC---CTT
T ss_pred HHHHHHHHHhC-CCeeecCCC--CceEEEEeccc-c---------------CCCHHHHHHHH-HHcCcEECCCC---CCC
Confidence 88888888876 899986432 22334444443 1 25677787777 66799876211 121
Q ss_pred hhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHHHHHHHhcc
Q 038499 468 GHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFP----YYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 468 ~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~----~~~t~eeid~ll~al~~v~~~~~ 526 (609)
-.. ...++.|||..+ .-+.++|++.+.+.|.+++..+.
T Consensus 401 D~s---------------------p~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~~~ 442 (490)
T 3ou5_A 401 DRS---------------------AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGL 442 (490)
T ss_dssp CCC---------------------SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---------------------CCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHhhh
Confidence 100 012578999864 45689999999999999886544
No 224
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.78 E-value=6.7e-17 Score=173.87 Aligned_cols=205 Identities=14% Similarity=0.097 Sum_probs=126.6
Q ss_pred EEecCCCCC------CChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTASG------RSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~g------~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|+.++. ..++.|.+++.+.+..... .. + ......+++++++++++ ..+ +|+|+++|++ +
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~~-~-----~~~~~~~la~~l~~~~~-~~~-~v~~~~sGse-a 121 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLS---FG-A-----PTEMEVKMAQLVTDLVP-TMD-MVRMVNSGTE-A 121 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC---CS-S-----CCHHHHHHHHHHHHHST-TCS-EEEEESSHHH-H
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcc---cC-C-----CCHHHHHHHHHHHhhCC-CCC-EEEEeCcHHH-H
Confidence 589987653 3578899999988865321 10 1 12456778899999987 444 8999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHH-HHHHcC-------------------ceEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLL-SWRQSL-------------------AEVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~G-------------------~~vv~v~~~~ 212 (609)
+..++++.. ....++ .|++....||+... .....+ ..+..++.+
T Consensus 122 ~~~al~~a~-------------~~~~~~--~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (429)
T 4e77_A 122 TMSAIRLAR-------------GYTGRD--KIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN- 185 (429)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTT-
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-
Confidence 666555321 012333 45555555554432 111111 122333322
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcc--cccCCCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYV--EIDVRSGQT 286 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~--~id~~~~~~ 286 (609)
|+++|++++++. .+++++++++.+++.+|.+.+ +++|.++|++||+++|+|++++.... ....... .
T Consensus 186 ----d~~~le~~l~~~--~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~-~ 258 (429)
T 4e77_A 186 ----DLASVRQAFEQY--PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYY-H 258 (429)
T ss_dssp ----CHHHHHHHHHHS--TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHT-T
T ss_pred ----CHHHHHHHHHhc--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhc-C
Confidence 899999999742 135677777777777888888 99999999999999999999882200 0001111 0
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
...|++++ +|.++++.++|++++++++ ++.+.
T Consensus 259 ~~pdi~t~--sK~~~~G~~~G~~~~~~~~--~~~l~ 290 (429)
T 4e77_A 259 VIPDLTCL--GKIIGGGMPVGAFGGRREV--MNALA 290 (429)
T ss_dssp CCCSEEEE--EGGGGTTSCCEEEEECHHH--HTTBT
T ss_pred CCCCeeee--cccccCCCCeEEEEECHHH--HHHhc
Confidence 13477655 5999865568999999988 44443
No 225
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.78 E-value=2.7e-17 Score=177.23 Aligned_cols=337 Identities=12% Similarity=0.026 Sum_probs=192.7
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |..++.|.+++.+.+... . +.. + ......+++++++++++ ..+ +|+|+++|+. +
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~--~-~~~-~-----~~~~~~~l~~~la~~~~-~~~-~v~~~~sgse-A 124 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARG--W-LYG-A-----PGEAEVLLAEKILGYVK-RGG-MIRFVNSGTE-A 124 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC--S-CCS-S-----CCHHHHHHHHHHHHHHC-TTC-EEEEESSHHH-H
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhC--C-CCC-C-----CCHHHHHHHHHHHHhCC-CCC-EEEEeCCHHH-H
Confidence 47887643 346788999998887642 1 111 1 23456788999999995 344 8999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH--------------HcCc------eEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR--------------QSLA------EVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~--------------~~G~------~vv~v~~~~ 212 (609)
+..++++.. .+..++ .|++....||+....+. ..|+ ++..++.+
T Consensus 125 ~~~al~~ar-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~- 188 (434)
T 2epj_A 125 TMTAIRLAR-------------GYTGRD--LILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYN- 188 (434)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETT-
T ss_pred HHHHHHHHH-------------HhhCCC--eEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCC-
Confidence 666655410 012344 35555555555322111 1232 35666642
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCccc--ccCCCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVE--IDVRSGQT 286 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~--id~~~~~~ 286 (609)
|+++|++++++.. +++++++++..+++||.+.| +++|.++|++||+++|+|++++.-... ..+... .
T Consensus 189 ----d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~-~ 261 (434)
T 2epj_A 189 ----DVEALERVFAEYG--DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYF-N 261 (434)
T ss_dssp ----CHHHHHHHHHHHG--GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHH-T
T ss_pred ----CHHHHHHHHHhCC--CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHh-C
Confidence 8999999997421 25788888888888999998 999999999999999999998832110 000000 0
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHHHHHH
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRA 365 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~a 365 (609)
...|++ |++|.+++...+|++++++++ ++.+.+. + .. ..... .+.+.......+
T Consensus 262 ~~~di~--s~sK~l~~G~~~G~v~~~~~~--~~~l~~~--~-~~------------------~~~~t~~~~~~~~aa~~a 316 (434)
T 2epj_A 262 IEGDII--VLGKIIGGGFPVGAVAGSREV--MSLLTPQ--G-KV------------------FNAGTFNAHPITMAAGLA 316 (434)
T ss_dssp CCCSEE--EEEGGGGTTSSCEEEEECHHH--HTTBTTT--S-SB------------------CCCCTTTTCHHHHHHHHH
T ss_pred CCCCee--eecchhcCCcceeeeeecHHH--HHhhccC--C-Cc------------------ccCCCCCcCHHHHHHHHH
Confidence 135776 455999874458999999988 4444321 0 00 00000 122222222234
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----CceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCC
Q 038499 366 ALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLH 441 (609)
Q Consensus 366 al~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 441 (609)
+++.. +. +.+.++.+++.+++.+.|+++ +-..... ....++++.+.. ...... ..........
T Consensus 317 ~l~~~--~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~~~~i~~~~-~~~~~~---~~~~~~~~~~ 383 (434)
T 2epj_A 317 TLKAL--EE---EPVYSVSREAAKALEEAASEVLDRTGLPYTIN----RVESMMQLFIGV-EEVSNA---AQARKADKKF 383 (434)
T ss_dssp HHHHH--HH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE----EETTEEEEEETC-SCCSSH---HHHTTSCHHH
T ss_pred HHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE----EeeeEEEEEEeC-CCcccc---hhccccCHHH
Confidence 44433 22 234566666777777776543 2111111 123455555432 000000 0000000012
Q ss_pred hHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 038499 442 GPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFI 521 (609)
Q Consensus 442 ~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v 521 (609)
...+.+.|.+ .||.+++|. ...+|++ ..+|++|+++++++|+++
T Consensus 384 ~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~~~~--~~~t~e~i~~~l~~l~~~ 427 (434)
T 2epj_A 384 YVKLHEEMLR-RGVFIAPSN---------------------------------LEAVFTG--LPHQGEALEIAVEGLRSS 427 (434)
T ss_dssp HHHHHHHHHH-TTEECCSST---------------------------------TSCEECC--TTCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCeEEeccC---------------------------------CCcEEEe--ccCCHHHHHHHHHHHHHH
Confidence 4568888865 599998541 1235554 568999999999999998
Q ss_pred HHh
Q 038499 522 AIY 524 (609)
Q Consensus 522 ~~~ 524 (609)
++.
T Consensus 428 l~~ 430 (434)
T 2epj_A 428 LKT 430 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 226
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.78 E-value=2.1e-17 Score=180.32 Aligned_cols=349 Identities=12% Similarity=0.034 Sum_probs=190.9
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCC-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPF-YGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTT 150 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~-~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtt 150 (609)
..|+|..++ |..++.|.+++.+++... +.+... + ......++.+++.+.++++++.+.+ .|+|+.+|+.
T Consensus 63 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~--~-~~~~~~~l~~~la~~l~~~~~~~~~-~v~f~~sGse 138 (472)
T 1ohv_A 63 NRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPA--L-GILPPENFVEKLRESLLSVAPKGMS-QLITMACGSC 138 (472)
T ss_dssp CEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCC--T-TTSCBTTHHHHHHHTGGGGCCTTCC-EEEEESSHHH
T ss_pred CEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccc--c-ccccHHHHHHHHHHHHHHhCCCCcC-EEEEeCCchh
Confidence 358998643 556889999998875421 111110 0 0011133445555556666654554 8999977777
Q ss_pred HHHHHHHHHhcccc----hh----hHHH--HHHhhhcCCC-ceEEEECCCCccchHH-HHHHcCce--------E---EE
Q 038499 151 AAIKRLQEVMGIAV----PS----ILRE--KLIKCLRDEE-RWVVFVGPHEHHSNLL-SWRQSLAE--------V---VE 207 (609)
Q Consensus 151 aal~~l~~~l~~~~----~~----~~~~--~~~~~l~~gd-~~~Vlv~~~~h~s~~~-~~~~~G~~--------v---v~ 207 (609)
+ +..++++.-... .+ ..++ .....-.+|. +..|++....||+... .....|.. + ..
T Consensus 139 A-~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 139 S-NENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp H-HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred H-HHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence 5 444443321000 00 0000 0000001341 1256665555555443 33333321 1 12
Q ss_pred EecCC-CC-------------CCCHHHHHHHHhhhcc-CCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 208 IGLDD-DG-------------LLDIEALRSKLELYKD-AKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 208 v~~~~-~g-------------~ld~e~L~~al~~~~~-~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
++... .. ..|+++|+++|+++.. ..++++|+++.++|++|.+.| +++|.++|++||+++|+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 22211 00 1268899999974211 017889999989999999888 99999999999999999
Q ss_pred ecccc-CCccc--ccCCCCCCC-CccEEEEcCCCC-CCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccc
Q 038499 269 DFAAS-GPYVE--IDVRSGQTD-GYDAIFLSTHKF-LGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTL 343 (609)
Q Consensus 269 D~A~~-~~~~~--id~~~~~~~-~~D~v~~S~hK~-lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (609)
|++++ ++... +.+...... .+|++++| |. +|| |+++ ++++ ....+...++ +
T Consensus 298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~G----G~~~-~~~~---~~~~~~~~~~-T------------- 353 (472)
T 1ohv_A 298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMTG----GFFH-KEEF---RPNAPYRIFN-T------------- 353 (472)
T ss_dssp ECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSSE----EEEE-CGGG---SCSSSSSSCC-S-------------
T ss_pred eCcccCCCCCCCchhccccCCCCCCCEEEEc--cccccC----CccC-chhh---cccccccccC-c-------------
Confidence 99987 34332 122222100 16887665 98 563 6665 5554 2222211110 0
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----Cc-eEEeCCCCCCCcceEEEE
Q 038499 344 YLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QN-IKILGNTSTKRQAILSFN 418 (609)
Q Consensus 344 ~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~-i~v~~~~~~~r~~~~~f~ 418 (609)
..+.+.......++++... . +.+.++.+++++++.+.|.++ |+ +.-..+ ...++.+.
T Consensus 354 ---------~~~~~~~~aaa~aal~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~----~g~~~~~~ 415 (472)
T 1ohv_A 354 ---------WLGDPSKNLLLAEVINIIK--R---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRG----RGTFCSFD 415 (472)
T ss_dssp ---------SSSCHHHHHHHHHHHHHHH--H---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEE----ETTEEEEE
T ss_pred ---------cCccHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecC----CceEEEEE
Confidence 0122222223334444432 2 234566677777777776543 42 322211 23455553
Q ss_pred eccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEE
Q 038499 419 IHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWT 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~i 498 (609)
+.. . .....+++.|.+ .||.++++ ..+++
T Consensus 416 ~~~-~----------------~~~~~~~~~l~~-~Gv~~~~~---------------------------------g~~~i 444 (472)
T 1ohv_A 416 TPD-E----------------SIRNKLISIARN-KGVMLGGC---------------------------------GDKSI 444 (472)
T ss_dssp CSS-H----------------HHHHHHHHHHHH-TTEECEEE---------------------------------TTTEE
T ss_pred eCC-h----------------hHHHHHHHHHHH-CCeEEecC---------------------------------CCCEE
Confidence 322 1 124577888866 59988742 03789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 499 RISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 499 Rls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
|+++++.+|++|+++++++|+++++.
T Consensus 445 Ri~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 445 RFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998764
No 227
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.76 E-value=2.7e-16 Score=170.38 Aligned_cols=205 Identities=17% Similarity=0.055 Sum_probs=125.8
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |..++.|.+++.+.+... .+.. ...+...++.+++++.++ +.+ +|+|+++ ++++
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~---~~~~------~~~~~~~~la~~l~~~~~-~~~-~v~~~~g-g~eA 125 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHG---VQYA------ASHPLEVRWAERIVAAFP-SIR-KLRFTGS-GTET 125 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTT---CSSC------SSCHHHHHHHHHHHHHCT-TCS-EEEEESC-HHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhC---CCCC------CCCHHHHHHHHHHHhhCC-CCC-EEEEeCC-HHHH
Confidence 47888544 446788999998887542 1111 134567778888888876 444 8999954 4556
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHH-----------cCc------eEEEEecCCCCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQ-----------SLA------EVVEIGLDDDGL 215 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-----------~G~------~vv~v~~~~~g~ 215 (609)
+..++.+.. .+..++ .|++.+..||+....+.. .|+ .+..++.
T Consensus 126 ~~~al~~ar-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----- 185 (453)
T 2cy8_A 126 TLLALRVAR-------------AFTGRR--MILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP----- 185 (453)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEECC----------------------------CGGGEEEECT-----
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----
Confidence 777666510 012233 355555556543322111 133 2444443
Q ss_pred CCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCccc--ccCCCCCCCCc
Q 038499 216 LDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVE--IDVRSGQTDGY 289 (609)
Q Consensus 216 ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~--id~~~~~~~~~ 289 (609)
.|+++|++++++.. +++++++++.++|+||.+.| +++|.++|++||+++|+|++++.-... ..+.... -..
T Consensus 186 ~d~~~le~~l~~~~--~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~-~~~ 262 (453)
T 2cy8_A 186 DDIEGMREVFANHG--SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLD-VQP 262 (453)
T ss_dssp TCHHHHHHHHHHHG--GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHT-CCC
T ss_pred CCHHHHHHHHHhcC--CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhC-CCC
Confidence 38999999997421 35778888777788999988 999999999999999999998732110 0010010 135
Q ss_pred cEEEEcCCCCCCCCCCcEEEEEechhhccCCCC
Q 038499 290 DAIFLSTHKFLGGPGSPGILLMTKALYQLGSFP 322 (609)
Q Consensus 290 D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~ 322 (609)
|++ |++|+++++..+|++++++++ ++.+.
T Consensus 263 di~--s~sK~l~~G~~~G~v~~~~~~--~~~l~ 291 (453)
T 2cy8_A 263 DLT--CLAKASAGGLPGGILGGREDV--MGVLS 291 (453)
T ss_dssp SEE--EEEGGGGTTSSCEEEEECHHH--HTTSS
T ss_pred cEE--EEChhhhCCcceEEEechHHH--HHHhc
Confidence 766 455999865568999999988 44443
No 228
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.75 E-value=1.8e-17 Score=177.04 Aligned_cols=295 Identities=14% Similarity=0.078 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHh-CC-----CCCC-cEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchH
Q 038499 123 VHEASNYIKKCL-GG-----GQED-AMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNL 195 (609)
Q Consensus 123 ~~e~r~~ia~~~-g~-----~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (609)
..++|+.+++++ +. +++. ++++| +|+++++..++.++. .+.+ | .|+++.+.|+.+.
T Consensus 74 ~~~lr~aia~~~~~~~~~~~~~~~i~i~~t-~G~~~al~~~~~~l~-------------~~~~-d--~Vlv~~P~y~~~~ 136 (405)
T 3k7y_A 74 TEDFSTLTQNLIFGNNSKYIEDKKICTIQC-IGGTGAIFVLLEFLK-------------MLNV-E--TLYVTNPPYINHV 136 (405)
T ss_dssp CHHHHHHHHHHHHCSSCTTTTTTCEEEEEE-EHHHHHHHHHHHHHH-------------TTTC-C--EEEEESSCCHHHH
T ss_pred cHHHHHHHHHHHcCCCCccccccceEEEEc-CchHHHHHHHHHHHH-------------hcCC-C--EEEEeCCCCHhHH
Confidence 345666666665 21 1222 35777 788889999888763 0126 7 7999999999999
Q ss_pred HHHHHcCceEEEEec-CC-CCCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccCH---HHHHHHHHHhCCeEEEe
Q 038499 196 LSWRQSLAEVVEIGL-DD-DGLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSDT---RSIARLLHQYGGFACFD 269 (609)
Q Consensus 196 ~~~~~~G~~vv~v~~-~~-~g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~dl---~~I~~la~~~g~~vivD 269 (609)
..++..|++++.+++ ++ ++.+|+++|++++++. +++++++++.+ +||||.+.+. ++|+++|++||+++|+|
T Consensus 137 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~D 213 (405)
T 3k7y_A 137 NMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI---PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFD 213 (405)
T ss_dssp HHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS---CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEe
Confidence 999999999999998 33 4789999999999742 35678777655 8999999884 56888999999999999
Q ss_pred ccccCCc-ccc-----cCCCC-CCCCccEEEEcCCCCCCCC-CCcEEEEE---echhhccCCCCCCccCCCceEeecccc
Q 038499 270 FAASGPY-VEI-----DVRSG-QTDGYDAIFLSTHKFLGGP-GSPGILLM---TKALYQLGSFPPSTCGGGTVNYVNGFN 338 (609)
Q Consensus 270 ~A~~~~~-~~i-----d~~~~-~~~~~D~v~~S~hK~lggp-~g~G~L~~---~~~~~~l~~~~p~~~ggg~v~~~~~~~ 338 (609)
+++..-. ... .+..+ .....-+++.|++|.++-| ..+|++++ ++++ +..+...
T Consensus 214 e~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~--~~~~~~~-------------- 277 (405)
T 3k7y_A 214 IAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEE--KKIVFNN-------------- 277 (405)
T ss_dssp ESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHH--HHHHHHH--------------
T ss_pred cCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHH--HHHHHHH--------------
Confidence 9975321 100 01110 0112347778999999833 45999875 3333 1111000
Q ss_pred cccccccccccccccCCCh-hHHHHH-HHHHHHH-HHH--hcCHHHHHHHHHHHHHHHHHHhC----CCC---ceEEeCC
Q 038499 339 EKDTLYLEDIEERESGGTP-QVIQMI-RAALAFW-VKE--YIGHEVIKKQEETYIERALERLL----PNQ---NIKILGN 406 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp-~i~~~~-~aal~~~-~~~--~~g~~~i~~~~~~l~~~~~~~L~----~~p---~i~v~~~ 406 (609)
+.. ..+.....+ .+.+.+ .+++.-- +.+ ....+.++++.++.++++.+.|+ ++. ++++..+
T Consensus 278 ------l~~-~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p 350 (405)
T 3k7y_A 278 ------LCF-IVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK 350 (405)
T ss_dssp ------HHH-HHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS
T ss_pred ------HHH-HHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC
Confidence 000 001111222 233322 1111110 000 01234556667888888888887 652 1344433
Q ss_pred CCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHH
Q 038499 407 TSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAI 486 (609)
Q Consensus 407 ~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~ 486 (609)
..+++.|.-.+ . ++++.| +++||.+.+|
T Consensus 351 ----~gg~f~~~~l~--------------------~-~~~~~L-~~~gV~v~p~-------------------------- 378 (405)
T 3k7y_A 351 ----QRGLFSFVPLL--------------------A-KIAEHL-KTHHIYIINN-------------------------- 378 (405)
T ss_dssp ----CCSSEEECGGG--------------------G-GGTTTT-TTTTEECCTT--------------------------
T ss_pred ----CceEEEecCCC--------------------H-HHHHHH-HHCCEeecCC--------------------------
Confidence 45666654333 2 234556 6679988732
Q ss_pred hhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 487 QKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 487 ~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
+ |||+.. .+++++++++++|++++++
T Consensus 379 ---------~--Ris~a~-~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 379 ---------G--RINVSG-ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp ---------S--EEEGGG-CCTTHHHHHHHHHHHHHHC
T ss_pred ---------C--eEEEec-cCHHHHHHHHHHHHHHHhh
Confidence 2 999952 4779999999999998764
No 229
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.73 E-value=1.8e-16 Score=170.27 Aligned_cols=332 Identities=14% Similarity=0.029 Sum_probs=188.3
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
.|+|..++ |..++.|.+++.+.+... .+.. .......+++++++++++ +.+ +|+|+++|+. +
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~------~~~~~~~~l~~~l~~~~~-~~~-~v~~~~~g~e-a 120 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERG---LTFG------APSPLEVALAKKVKRAYP-FVD-LVRFVNSGTE-A 120 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---SCCS------SCCHHHHHHHHHHHHHCT-TCC-EEEEESSHHH-H
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhC---CCCC------CCCHHHHHHHHHHHHhCC-CCC-EEEEeCCHHH-H
Confidence 47787643 456788999998887641 1111 123456788899999986 444 8999955555 5
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH--------------HcC------ceEEEEecCC
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR--------------QSL------AEVVEIGLDD 212 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~--------------~~G------~~vv~v~~~~ 212 (609)
+..++++.. .+..++ .|++.+..||+....+. ..| .+++.++.
T Consensus 121 ~~~al~~ar-------------~~~~~~--~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-- 183 (424)
T 2e7u_A 121 TMSALRLAR-------------GYTGRP--YIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-- 183 (424)
T ss_dssp HHHHHHHHH-------------HHHCCC--EEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT--
T ss_pred HHHHHHHHH-------------HhhCCC--EEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC--
Confidence 666655310 012334 35555555555332211 112 23555554
Q ss_pred CCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCccc--ccCCCCCC
Q 038499 213 DGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVE--IDVRSGQT 286 (609)
Q Consensus 213 ~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~--id~~~~~~ 286 (609)
.|+++|++++++.. +++++++++..+++||.+.| +++|.++ ++||+++|+|++++.-... ..+... .
T Consensus 184 ---~d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~-~ 256 (424)
T 2e7u_A 184 ---NDPEGLREVLKRRG--EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELL-G 256 (424)
T ss_dssp ---TCHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHH-T
T ss_pred ---CCHHHHHHHHHhCC--CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHh-C
Confidence 38999999997421 25667777666666999888 9999999 9999999999998832111 000000 0
Q ss_pred CCccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHHHHHH
Q 038499 287 DGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRA 365 (609)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~a 365 (609)
...|++ |++|++|++..+|++++++++ ++.+.+... . ..... .+.+.......+
T Consensus 257 ~~~di~--s~sK~l~~G~~~G~~~~~~~~--~~~~~~~~~---~------------------~~~~t~~~~~~~~aaa~a 311 (424)
T 2e7u_A 257 LKPDLV--TLGKILGGGLPAAAYAGRREI--MEKVAPLGP---V------------------YQAGTLSGNPLAMAAGLA 311 (424)
T ss_dssp CCCSEE--EECGGGGTTSSCEEEEECHHH--HTTBTTTSS---B------------------CCCCTTCSCHHHHHHHHH
T ss_pred CCcchh--hhhhhhhCCcceEEEEEcHHH--HhhhcccCC---c------------------ccCCCCCCCHHHHHHHHH
Confidence 135765 567999875568999999988 444433100 0 00000 112222222234
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC----Cce-EEeCCCCCCCcceEEEEeccCCCCCcCCCCCCC-CCCCC
Q 038499 366 ALAFWVKEYIGHEVIKKQEETYIERALERLLPN----QNI-KILGNTSTKRQAILSFNIHSSTINSSLGENTKT-ETDKP 439 (609)
Q Consensus 366 al~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~----p~i-~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~-~~~~~ 439 (609)
++... +. .+.+.++.+++.+++.+.|+++ +-+ .+.+ ...++++.+.. ....+ ... .....
T Consensus 312 al~~~--~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-----~g~~~~i~~~~-~~~~~----~~~~~~~~~ 377 (424)
T 2e7u_A 312 TLELL--EE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNR-----VGSMITVFFTE-GPVVT----FQDARRTDT 377 (424)
T ss_dssp HHHHH--HH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-----ETTEEEEESSS-SCCCS----HHHHTTSCH
T ss_pred HHHHH--Hh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe-----eceEEEEEEeC-CCCcc----hhhhcccCH
Confidence 44432 22 1456677777778887777653 221 1221 23455554432 00000 000 00000
Q ss_pred CChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 038499 440 LHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALE 519 (609)
Q Consensus 440 l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~ 519 (609)
.....+.+.|.+ .||.+++|. ...+|++ ...|++|+++++++|+
T Consensus 378 ~~~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~~~~--~~~t~~~i~~~l~~l~ 421 (424)
T 2e7u_A 378 ELFKRFFHGLLD-RGIYWPPSN---------------------------------FEAAFLS--VAHREEDVEKTLEALR 421 (424)
T ss_dssp HHHHHHHHHHHT-TTEECCSSS---------------------------------SSCEECC--TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCeEEeccC---------------------------------CCceEee--ccCCHHHHHHHHHHHH
Confidence 124567788865 699998542 1235655 5689999999999998
Q ss_pred HH
Q 038499 520 FI 521 (609)
Q Consensus 520 ~v 521 (609)
++
T Consensus 422 ~~ 423 (424)
T 2e7u_A 422 KA 423 (424)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.71 E-value=1.5e-16 Score=167.65 Aligned_cols=326 Identities=13% Similarity=0.071 Sum_probs=195.7
Q ss_pred HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCC-CceEEEECCCCccchHHHHHHcCce
Q 038499 126 ASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDE-ERWVVFVGPHEHHSNLLSWRQSLAE 204 (609)
Q Consensus 126 ~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G~~ 204 (609)
+.++|+.+ |.+.....+++ +|+|+++..++.+.. +. -+|+ + .|+++...|.|...++...|++
T Consensus 122 ~ld~L~~~-G~~~~~~~flV-nGsTgg~lamilaa~-------r~-----~rpg~d--~VIvpRn~HKSv~kAliL~Gl~ 185 (501)
T 3hl2_A 122 VLDIIKLA-GVHTVANCFVV-PMATGMSLTLCFLTL-------RH-----KRPKAK--YIIWPRIDQKSCFKSMITAGFE 185 (501)
T ss_dssp HHHHHHHT-TCTTCCEEEEE-SSCHHHHHHHHHHHH-------HH-----HCTTCC--EEEEECCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHc-CCCCCCcEEEE-CcHHHHHHHHHHHHc-------Cc-----ccCCCC--EEEEecchHHHHHHHHHHcCCe
Confidence 44555555 88865456777 788865555444331 10 1234 5 7999999999999999999999
Q ss_pred EEEEec---CCCCCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccCHHHHHHHHHHhCCeEEEeccccCCccccc
Q 038499 205 VVEIGL---DDDGLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVEID 280 (609)
Q Consensus 205 vv~v~~---~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~~~id 280 (609)
+++|+. ++...+|+++++++|+++. ....++++..+ .+-.|...|+++|+++||+||++++||+||++-.....
T Consensus 186 Pv~V~p~~d~~~~~id~e~le~aI~e~g--a~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~ 263 (501)
T 3hl2_A 186 PVVIENVLEGDELRTDLKAVEAKVQELG--PDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCM 263 (501)
T ss_dssp EEEECEEEETTEEEECHHHHHHHHHHHC--GGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHH
T ss_pred EEEEeeeecccccCCCHHHHHHHHHhcC--CCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhh
Confidence 999976 3346789999999998751 13344444433 34355779999999999999999999999887432211
Q ss_pred ---CCCCCCCC-ccEEEEcCCCCCCCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCC
Q 038499 281 ---VRSGQTDG-YDAIFLSTHKFLGGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGT 356 (609)
Q Consensus 281 ---~~~~~~~~-~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gt 356 (609)
...+. .| +|+++.|+||++..|-|.|+++.+++-+ ++.+...++| + ..++
T Consensus 264 ~lp~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~-l~~~~~~yPG-----------------------r-~S~S 317 (501)
T 3hl2_A 264 HLIQQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSF-IQEISKMYPG-----------------------R-ASAS 317 (501)
T ss_dssp HHHHHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHH-HHHHHHTSCS-----------------------C-BCSH
T ss_pred hhHHHHHh-cCCCcEEEecccccceeecCceEEEeCCHHH-HHHHHHhCCC-----------------------C-CCCc
Confidence 01111 14 8999999999998887756666665321 2222111111 0 1222
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCC---ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCC
Q 038499 357 PQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLPNQ---NIKILGNTSTKRQAILSFNIHSSTINSSLGENTK 433 (609)
Q Consensus 357 p~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~~p---~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~ 433 (609)
|. ..+..+.+.+ ...|+..+.++..++++++.+.|+++. |-+++.. +.-+|-.-.... ...
T Consensus 318 ps-ldl~~tLL~l---Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~---~~n~is~a~tl~-~~~-------- 381 (501)
T 3hl2_A 318 PS-LDVLITLLSL---GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHT---PHNPISLAMTLK-TLD-------- 381 (501)
T ss_dssp HH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCC---TTCSSEEEEECT-TSC--------
T ss_pred HH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCC---CCCceeEEEecc-ccc--------
Confidence 32 2222333333 344678888999999999999988753 3455543 233333222222 110
Q ss_pred CCCCCCCChHHHHHHHhhhcCcE----eccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHH
Q 038499 434 TETDKPLHGPFVATLLNDLFGIQ----ARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNE 509 (609)
Q Consensus 434 ~~~~~~l~~~~v~~~L~~~~GI~----v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~e 509 (609)
........++..+|..+ +|. |..|..-. -.++.+.+.+-- . ......++-++...-++++
T Consensus 382 --~~~~~~~t~~gs~Lf~r-~vsG~Rvv~~~~~~~-i~g~~f~~~g~h---------~---~~~~~~yl~~a~aiG~~~~ 445 (501)
T 3hl2_A 382 --EHRDKAVTQLGSMLFTR-QVSGARVVPLGSMQT-VSGYTFRGFMSH---------T---NNYPCAYLNAASAIGMKMQ 445 (501)
T ss_dssp --TTTSCHHHHHHHHHHHT-TCCSCEEECTTCCEE-ETTEEESSTTTT---------S---SCCSSCEEEEECCTTCCHH
T ss_pred --ccccccHHHHHHHHHhc-CCCcceeecCCCceE-ECCeeecCcccC---------C---CCCCchHHHHHHHcCCCHH
Confidence 00011344666666543 442 11111000 011222222210 0 1112478899988889999
Q ss_pred HHHHHHHHHHHHHHhccc
Q 038499 510 EFEFTLEALEFIAIYGQR 527 (609)
Q Consensus 510 eid~ll~al~~v~~~~~~ 527 (609)
|||.+++.|+++.....+
T Consensus 446 ~v~~~~~~l~~~~~~~~~ 463 (501)
T 3hl2_A 446 DVDLFIKRLDRCLKAVRK 463 (501)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999886553
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.66 E-value=1.1e-15 Score=163.73 Aligned_cols=339 Identities=12% Similarity=0.033 Sum_probs=198.7
Q ss_pred EEecCCCCCCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHh-CCC--CCC-cEEEeCChHHHHHH
Q 038499 79 TYADHTASGRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCL-GGG--QED-AMIFCGSGTTAAIK 154 (609)
Q Consensus 79 vyld~~a~g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~-g~~--~~~-~vift~sGttaal~ 154 (609)
+|.|.....+.++.|.++....+.+ ..+|. |....+ ..++|+.+++++ |.. .+. ..+-| .|.|.++.
T Consensus 53 ~y~d~~g~~~vl~~Vk~A~~~~~~~--~~~~~--Y~p~~G----~p~lr~aia~~~~g~~~~~~~~~~~qt-~ggtga~~ 123 (420)
T 4h51_A 53 AYRDEQGRPYPLRVVRKAEQLLLDM--NLDYE--YLPISG----YQPFIDEAVKIIYGNTVELENLVAVQT-LSGTGAVS 123 (420)
T ss_dssp CCBCTTSCBCCCHHHHHHHHHHHHT--TCCCC--CCCTTC----CHHHHHHHHHHHHC---CGGGEEEEEE-EHHHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHhcC--CCCCC--CCCcCC----hHHHHHHHHHHhcCCCccccccceeee-cCchHHHH
Confidence 5778777778888888886554432 11221 222222 345566666654 322 221 22334 56666666
Q ss_pred HHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEE-EEecC--CCCCCCHHHHHHHHhhhccC
Q 038499 155 RLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVV-EIGLD--DDGLLDIEALRSKLELYKDA 231 (609)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv-~v~~~--~~g~ld~e~L~~al~~~~~~ 231 (609)
..+..+... ...||| .|+++++.|+.+...++..|++.+ ..+.. .+..+|.+.+.+.+... .
T Consensus 124 ~a~~~l~~~-----------~~~pgd--~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~--~ 188 (420)
T 4h51_A 124 LGAKLLTRV-----------FDAETT--PIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAA--P 188 (420)
T ss_dssp HHHHHHTTT-----------SCTTTS--CEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHS--C
T ss_pred HHHHHHHHh-----------cCCCCC--EEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhcc--C
Confidence 655544211 136888 699999999999999999999744 33332 35678999998888642 2
Q ss_pred CCceEEEEecccCccccccC---HHHHHHHHHHhCCeEEEeccccCC-cccccCCC-----C-CCCCccEEEEcCCCCCC
Q 038499 232 KRPILGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YVEIDVRS-----G-QTDGYDAIFLSTHKFLG 301 (609)
Q Consensus 232 ~~~~lv~~s~~sn~TG~~~d---l~~I~~la~~~g~~vivD~A~~~~-~~~id~~~-----~-~~~~~D~v~~S~hK~lg 301 (609)
+++++++++.|+||||...+ +++|+++|+++++++++|+++..- +...+... . .....-+++.|++|.++
T Consensus 189 ~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~ 268 (420)
T 4h51_A 189 DGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMG 268 (420)
T ss_dssp SSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC
T ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccc
Confidence 56788889999999999977 567899999999999999996532 11111000 0 01123467789999987
Q ss_pred CCC-CcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCCh-hHHHHHHHHHHHH---HHH--h
Q 038499 302 GPG-SPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTP-QVIQMIRAALAFW---VKE--Y 374 (609)
Q Consensus 302 gp~-g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp-~i~~~~~aal~~~---~~~--~ 374 (609)
-++ .+|++++..... ...... ...+.. -.+.....+ ...+.+. +..+. +.. .
T Consensus 269 ~~G~RvG~~~~~~~~~--~~~~~~-----------------~~~l~~-~~r~~~s~~p~~~a~~~-~~~l~d~~l~~~~~ 327 (420)
T 4h51_A 269 LYSERAGTLSLLLKDK--TKRADV-----------------KSVMDS-LIREEYTCPPAHGARLA-HLILSNNELRKEWE 327 (420)
T ss_dssp CGGGCEEEEEEECSCH--HHHHHH-----------------HHHHHH-HHHTTTSSCCHHHHHHH-HHHHHSHHHHHHHH
T ss_pred cccCceEEEEecccCH--HHHHHH-----------------HHHHHH-hhhcccCcchHHHHHHH-HHHhcCHHHHHHHH
Confidence 543 499999876541 110000 000000 011112233 3333221 11111 000 1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCC--c-eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhh
Q 038499 375 IGHEVIKKQEETYIERALERLLPNQ--N-IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLND 451 (609)
Q Consensus 375 ~g~~~i~~~~~~l~~~~~~~L~~~p--~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 451 (609)
...+.++++.+++++.+.+.|.++. + +..+. +..+.|+|. + ++.++ +++|.
T Consensus 328 ~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~----~q~GmF~~~--g------------------ls~e~-v~~L~- 381 (420)
T 4h51_A 328 AELSAMAERIRTMRRTVYDELLRLQTPGSWEHVI----NQIGMFSFL--G------------------LSKAQ-CEYCQ- 381 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH----HCCSSEEEC--C------------------CCHHH-HHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeec----CCCceEEec--C------------------cCHHH-HHHHH-
Confidence 1245677888888888888887641 1 11111 123556553 2 34444 46674
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcc
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQ 526 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~ 526 (609)
++||.+.+| | |||+.. .+++.|++++++|.+++++..
T Consensus 382 e~~Vy~~~~-----------------------------------g--Ris~Ag-l~~~ni~~~a~aI~~vvr~i~ 418 (420)
T 4h51_A 382 NHNIFITVS-----------------------------------G--RANMAG-LTHETALMLAQTINDAVRNVN 418 (420)
T ss_dssp HTTEECCTT-----------------------------------C--EEEGGG-CCHHHHHHHHHHHHHHHC---
T ss_pred hCCEEEcCC-----------------------------------C--EEEecc-CCHHHHHHHHHHHHHHHHHhh
Confidence 579876521 3 999853 689999999999999987654
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.62 E-value=4e-14 Score=152.35 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=194.0
Q ss_pred eEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 78 LTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 78 ~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
.-|+|+.++ |-..+.|.+++.+++.... +...+ +....++.+.|++.+.. . +.|.|++|||++
T Consensus 87 ~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~---~~~~~------~~~~~~lae~l~~~~p~-~-~~v~f~~SGsEA 155 (454)
T 4ao9_A 87 HRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGI---NLTGH------NLLEGRLARLICERFPQ-I-EQLRFTNSGTEA 155 (454)
T ss_dssp CEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCS---CCCSE------ESSHHHHHHHHHHHSTT-C-SEEEEESSHHHH
T ss_pred CEEEEccccHHhhcccCCCHHHHHHHHHHHhcCC---CccCC------cHHHHHHHHHHHHhCCC-C-CEEEEeCchHHH
Confidence 359998754 4467899999988886431 11111 11244677788888863 2 389999899887
Q ss_pred HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH-H-----cCceEEEEecCCCCCCCHHHHHHHH
Q 038499 152 AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR-Q-----SLAEVVEIGLDDDGLLDIEALRSKL 225 (609)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~-----~G~~vv~v~~~~~g~ld~e~L~~al 225 (609)
....+-.+.. . .|.+ .|+.-...||.....+. . .......+|.+ |++++++.+
T Consensus 156 ~e~AiklAr~--------------~-tgr~-~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l 214 (454)
T 4ao9_A 156 NLMALTAALH--------------F-TGRR-KIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQI 214 (454)
T ss_dssp HHHHHHHHHH--------------H-HTCC-EEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHH
T ss_pred HHHHHHHHHh--------------c-ccCC-eEEEEeCCcCCccccccccccCccCCCCcccCCCc-----hHHHHHHHH
Confidence 5444432221 1 1222 45555555554321111 0 11234445543 899999999
Q ss_pred hhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccCC-CCCCCCccEEEEcCCCCC
Q 038499 226 ELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDVR-SGQTDGYDAIFLSTHKFL 300 (609)
Q Consensus 226 ~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~~-~~~~~~~D~v~~S~hK~l 300 (609)
+++. +++..|++..+....|.+.| +++|.++|++||+++|+|+++.+ -...... +...-..|+++++ |.+
T Consensus 215 ~~~~--~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~~~a~e~~gv~PDi~t~g--K~l 289 (454)
T 4ao9_A 215 ERHG--PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAPHGLANKLGIRSDLTTLG--KYI 289 (454)
T ss_dssp HHTG--GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGSTTCHHHHHTCCCSEEEEE--GGG
T ss_pred hhcC--CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCccccchhccCCCCcEEEec--ccc
Confidence 8532 45778899999999999988 88999999999999999999872 1111000 0000135888776 888
Q ss_pred CCCCCcEEEEEechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHH
Q 038499 301 GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVI 380 (609)
Q Consensus 301 ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i 380 (609)
||...+|.+++++++ .+.+.|.. +.+. ...-..|.|-..+...+.++. +-.+.+
T Consensus 290 ggG~Piga~~~~~ei--~~~~~~~~---~~~~----------------h~~T~~gnPla~AAala~L~~-----l~~~~~ 343 (454)
T 4ao9_A 290 GGGMSFGAFGGRADV--MALFDPRT---GPLA----------------HSGTFNNNVMTMAAGYAGLTK-----LFTPEA 343 (454)
T ss_dssp GTTSSCEEEEECHHH--HGGGCTTT---CSCC----------------CCCTTTTCHHHHHHHHHHHHH-----TSCHHH
T ss_pred CCCCcceeeeeHHHH--HHHHhhcc---CCcc----------------ccCCCCCCHHHHHHHHHHHHH-----HhccCh
Confidence 877778999999998 33333210 0000 000012333333322333332 223455
Q ss_pred HHHHHHHHHHHHHHhCCC----Cc-eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC-CCCC---hHHHHHHHhh
Q 038499 381 KKQEETYIERALERLLPN----QN-IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD-KPLH---GPFVATLLND 451 (609)
Q Consensus 381 ~~~~~~l~~~~~~~L~~~----p~-i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~-~~l~---~~~v~~~L~~ 451 (609)
.++..++.++++++|+++ +- .++.+ ...++.+.+...+.. +... ...+ ...+...|++
T Consensus 344 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg-----~G~m~gi~f~~~~~~--------~~~~~~~~d~~~~~~~~~~ll~ 410 (454)
T 4ao9_A 344 AGALAERGEALRARLNALCANEGVAMQFTG-----IGSLMNAHFVQGDVR--------SSEDLAAVDGRLRQLLFFHLLN 410 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTBSCEEEE-----ETTEEEEESCCSCCC--------SGGGGTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhCCCCEEEee-----eceEEEEEEecCCCC--------CHHHHHhhhHHHHHHHHHHHHH
Confidence 566666677777666542 21 12222 123344433220110 0000 0011 1234455555
Q ss_pred hcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhcccccCC
Q 038499 452 LFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFLPL 531 (609)
Q Consensus 452 ~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~p~ 531 (609)
.||.+++ .+.+.+++. +|++|||+++++|++++.....++|.
T Consensus 411 -~Gv~~~p-----------------------------------~~~~~~s~~--~T~~dId~~l~al~~~l~~~~a~lPr 452 (454)
T 4ao9_A 411 -EDIYSSP-----------------------------------RGFVVLSLP--LTDADIDRYVAAIGSFIGGHGALLPR 452 (454)
T ss_dssp -TTEECCT-----------------------------------TCEEECCTT--CCHHHHHHHHHHHHHHHHHSGGGSCB
T ss_pred -CCEEEcC-----------------------------------CCCEEEeCC--CCHHHHHHHHHHHHHHHHhccccCCC
Confidence 4888762 144555554 69999999999999999998888875
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.61 E-value=1.3e-12 Score=141.19 Aligned_cols=373 Identities=16% Similarity=0.118 Sum_probs=207.4
Q ss_pred HHHHHHHHHhhccC-------------CCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCC
Q 038499 51 SEKKLTWLQSQIIG-------------KNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTC 111 (609)
Q Consensus 51 ~~~~~~~~r~~~~g-------------~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~ 111 (609)
..+.+++.++.+++ .+.++.+..|+ -|+|..++ |-..+.|.+++.+++.... |..
T Consensus 27 s~~l~~r~~~~~~~~~~~~~P~~i~~a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---~~~ 100 (456)
T 4atq_A 27 SQALAERRSAVVAAGVASGVPVYVEDADGGIIRDVDGN---SFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFT---HTC 100 (456)
T ss_dssp HHHHHHHHHHHBCTTCCCSCSSCEEEEETTEEEETTSC---EEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCS---CCT
T ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeeecCEEEeCCCC---EEEEccccHHHHhcCCCCHHHHHHHHHHHhhcc---Ccc
Confidence 45667777766642 33334444443 48997643 5567899999988876542 221
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCc
Q 038499 112 DSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEH 191 (609)
Q Consensus 112 ~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h 191 (609)
. .. ...+...++.+.|.+++..+..+.+.|+.|||++.-. .+++-- . -.+.+ .|+.-...|
T Consensus 101 ~--~~-~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~-AlklAr-------------~-~t~r~-~ii~~~~~y 161 (456)
T 4atq_A 101 F--MV-TPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVEN-AVKVAR-------------L-ATGRD-AVVAFDHAY 161 (456)
T ss_dssp T--TT-SCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH-HHHHHH-------------H-HHCCC-EEEEETTCC
T ss_pred c--Cc-cCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHH-HHHHHh-------------h-hhcCC-eEEEEeccc
Confidence 1 11 1123344667788888876544478999888886333 322210 0 11222 466665566
Q ss_pred cchHH-HHHHc-------------CceEEEEecCC------CCCCCHHHHHHHHh---hhccCCCceEEEEecccCcccc
Q 038499 192 HSNLL-SWRQS-------------LAEVVEIGLDD------DGLLDIEALRSKLE---LYKDAKRPILGSFSACSNVTGI 248 (609)
Q Consensus 192 ~s~~~-~~~~~-------------G~~vv~v~~~~------~g~ld~e~L~~al~---~~~~~~~~~lv~~s~~sn~TG~ 248 (609)
|+... ..... ...+..+|... ....+.+.+++.+. .....+++..+++..+....|.
T Consensus 162 HG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~ 241 (456)
T 4atq_A 162 HGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGF 241 (456)
T ss_dssp CCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTC
T ss_pred CCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCc
Confidence 65432 22211 12455565432 11223444444332 1111245678889989888898
Q ss_pred ccC----HHHHHHHHHHhCCeEEEeccccC-Ccccc--cCCCCCCCCccEEEEcCCCCCCCCCCcEEEEEechhhccCCC
Q 038499 249 YSD----TRSIARLLHQYGGFACFDFAASG-PYVEI--DVRSGQTDGYDAIFLSTHKFLGGPGSPGILLMTKALYQLGSF 321 (609)
Q Consensus 249 ~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~L~~~~~~~~l~~~ 321 (609)
+.| +++|.++|++||+++|+|+++.+ +-... -..... -..|+++++ |.+||...+|.+++++++ .+.+
T Consensus 242 ~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~g-v~PDivt~g--K~lggg~P~~av~~~~~i--~~~~ 316 (456)
T 4atq_A 242 IVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEG-VVPDIITMA--KGIAGGLPLSAITGRADL--LDAV 316 (456)
T ss_dssp BCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTT-CCCSEEEEC--GGGGTTSSCEEEEEEHHH--HTTS
T ss_pred cccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccC-CCCchhhhh--hcccCcCCceeeEecHHH--Hhcc
Confidence 866 88999999999999999999875 22211 111110 135998887 888877678999999998 4555
Q ss_pred CCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC----
Q 038499 322 PPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERLLP---- 397 (609)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L~~---- 397 (609)
.+...++. ..|.|--.+...+.++.+ +. +.+.++.+++.+++.+.|++
T Consensus 317 ~~~~~~~T-----------------------f~gnpla~aaala~L~~i--~~---~~l~~~~~~~g~~l~~~L~~l~~~ 368 (456)
T 4atq_A 317 HPGGLGGT-----------------------YGGNPVACAAALAAIDTM--EQ---HDLNGRARHIEELALGKLRELAAE 368 (456)
T ss_dssp CTTSSCCS-----------------------SSSCHHHHHHHHHHHHHH--HH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCC-----------------------CCCChHHHHhhHHHHHHH--hh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 44332211 134444444444555544 22 23344555555555554433
Q ss_pred CCc--eEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCCCCChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCC
Q 038499 398 NQN--IKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDKPLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLD 475 (609)
Q Consensus 398 ~p~--i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~ 475 (609)
.+. ..+++.. ..+.-++.+.+.. +... ....--...+.+.+.+ .|+.+.. |. +
T Consensus 369 ~~~~~~~~v~~V-RG~Gl~~giel~~-~~~~---------~~~~~~~~~v~~~~~~-~Gvl~~~---~g-~--------- 423 (456)
T 4atq_A 369 LSAGGGSVVGDI-RGRGAMLAIELVQ-PGSK---------EPNAELTKAVAAACLK-EGVIILT---CG-T--------- 423 (456)
T ss_dssp CC-----CEEEE-EEETTEEEEEEBC-TTSC---------CBCHHHHHHHHHHHHH-TTEECEE---EC-T---------
T ss_pred cccccCCceEEe-eecceEEEEEEec-CCCC---------CcCHHHHHHHHHHHHH-CCCEEEe---cC-C---------
Confidence 211 1111110 0012334444433 1100 0000013456777766 4998763 11 1
Q ss_pred hhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 038499 476 EAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIY 524 (609)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~ 524 (609)
..+.|||..++..|++|+++++++|+++++.
T Consensus 424 ------------------~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 424 ------------------YGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp ------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1368999999999999999999999998763
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.37 E-value=1e-16 Score=173.52 Aligned_cols=343 Identities=14% Similarity=0.042 Sum_probs=191.3
Q ss_pred EEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 038499 79 TYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTAA 152 (609)
Q Consensus 79 vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGttaa 152 (609)
-|+|+.++ |-.++.|.+++.+++... .+. ........++.+.|+++++ ..+ .++|+++|+.+
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~---~~~------~~~~~~~~~Lae~L~~~~p-~~~-~v~~~nSGseA- 168 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVG---LNL------STQTENEALFAEAVCDRFP-SID-LVRFTNSGTEA- 168 (465)
Confidence 37887653 334678888888776541 111 1234567788899999985 333 78888677775
Q ss_pred HHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHH----HcCc--eEEEEecCCCCCCCHHHHHHHHh
Q 038499 153 IKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWR----QSLA--EVVEIGLDDDGLLDIEALRSKLE 226 (609)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~--~vv~v~~~~~g~ld~e~L~~al~ 226 (609)
+..++++.. ....++ .|++....||+...... ..|+ .++.++. -|+++|+++++
T Consensus 169 ~~~Aik~ar-------------~~tgr~--~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~ 228 (465)
T 2yky_A 169 NLMALATAT-------------AITGRK--TVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLK 228 (465)
Confidence 444444321 012223 46666666665433222 1233 3333433 27899999987
Q ss_pred hhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEEeccccCCcccccCCCCCCC--CccEEEEcCCCCC
Q 038499 227 LYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVEIDVRSGQTD--GYDAIFLSTHKFL 300 (609)
Q Consensus 227 ~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~~~~~id~~~~~~~--~~D~v~~S~hK~l 300 (609)
+. .+++++|+++.++++||.+.| +++|.++|++||+++|+|++++ .... .+...... ..|++ +++|++
T Consensus 229 ~~--~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~~a~~~~gv~pDi~--t~sK~l 302 (465)
T 2yky_A 229 RH--GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GGGAQEMLGISADLT--TLGKYI 302 (465)
Confidence 42 146888888877777998877 8999999999999999999998 4211 11111111 24655 567999
Q ss_pred CCCCCcEEEEEechhhccCCCCCCccCCCceEeeccccccccccccccccccc-CCChhHHHHHHHHHHHHHHHhcCHHH
Q 038499 301 GGPGSPGILLMTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERES-GGTPQVIQMIRAALAFWVKEYIGHEV 379 (609)
Q Consensus 301 ggp~g~G~L~~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~-~gtp~i~~~~~aal~~~~~~~~g~~~ 379 (609)
|+...+|++++++++ ++.+.+...|... .... .+.|.......+++..+ + .+.
T Consensus 303 g~G~piG~v~~~~~i--~~~l~~~~~g~~~-------------------~~~T~~~npla~aAa~aaL~~l--~---~~~ 356 (465)
T 2yky_A 303 GGGMSFGAFGGRRDL--MERFDPARDGAFA-------------------HAGTFNNNILTMSAGHAALTQI--Y---TRQ 356 (465)
Confidence 975558999999998 4555431001000 0000 12222222223334433 1 134
Q ss_pred HHHHHHHHHHHHHHHhCCCC-ceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCC-CCCChHHHHHHHhhhcCcEe
Q 038499 380 IKKQEETYIERALERLLPNQ-NIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETD-KPLHGPFVATLLNDLFGIQA 457 (609)
Q Consensus 380 i~~~~~~l~~~~~~~L~~~p-~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~-~~l~~~~v~~~L~~~~GI~v 457 (609)
+.++.+++.++++++|.++. ...+.... .....++++.+...+..+ ...... .......+.+.|.+ .||.+
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~g~G~~~~i~~~~~~~~~-----~~~~~~~d~~~~~~~~~~ll~-~GV~v 429 (465)
T 2yky_A 357 AASDLSASGDRFRANLNRIAVENQAPLQF-TGLGSLGTIHFSRAPIRS-----AGDVRAADQQLKELFFFHMLR-KGIYL 429 (465)
Confidence 56677777777777776641 11121111 123344444332200000 000000 00113456666765 58888
Q ss_pred ccCcccCChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhccccc
Q 038499 458 RGGCACAGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYGQRFL 529 (609)
Q Consensus 458 ~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~~~~~ 529 (609)
.++.. + . +++.+|++|+++++++|+++++....++
T Consensus 430 ~p~~~---------------------------------~-~---~s~~~t~edid~~l~~l~~~l~~~~~~~ 464 (465)
T 2yky_A 430 APRGM---------------------------------Y-A---LSLEIADAGRDAFAEALADFIGEQRALL 464 (465)
Confidence 74310 1 1 4455799999999999999887765544
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.48 E-value=9e-11 Score=127.16 Aligned_cols=359 Identities=15% Similarity=0.102 Sum_probs=201.3
Q ss_pred CCCccccCCCCCCceEEecCCCC------CCChHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC
Q 038499 64 GKNAEFDSPFGKRRLTYADHTAS------GRSLRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGG 137 (609)
Q Consensus 64 g~~~~~~~p~g~~~~vyld~~a~------g~~~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~ 137 (609)
|.+.++.+..|++ |+|..++ |-..+.|.+++.+++.... ..++. .+. ..+...++.++|.+..+.+
T Consensus 56 g~G~~l~D~dG~~---ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~-~~~~~---~~~-~~~~~~~lAe~L~~~~p~~ 127 (473)
T 4e3q_A 56 GEGPYIVDVNGRR---YLDANSGLWNMVAGFDHKGLIDAAKAQYERFP-GYHAF---FGR-MSDQTVMLSEKLVEVSPFD 127 (473)
T ss_dssp EETTEEEETTCCE---EEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC-CCCCC---TTE-EEHHHHHHHHHHHHHSSCS
T ss_pred eecCEEEeCCCCE---EEEcccCHHHhhccCCCHHHHHHHHHHHHhcc-ccccc---ccc-cCHHHHHHHHHHHhhCCCC
Confidence 6777888888764 9998765 4567889999988886542 11111 111 1233456777888888766
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccch-HHHHHHcC-----------ceE
Q 038499 138 QEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSN-LLSWRQSL-----------AEV 205 (609)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G-----------~~v 205 (609)
-+ .|.|+.|||++. ...+++.- .. + ...-+++.+ .|+.-...||.. ..++...| ..+
T Consensus 128 ~~-~v~f~~sGsEA~-e~AiKlAr-~~---~----~~~g~~~r~-~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~ 196 (473)
T 4e3q_A 128 SG-RVFYTNSGSEAN-DTMVKMLW-FL---H----AAEGKPQKR-KILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGF 196 (473)
T ss_dssp SC-EEEEESSHHHHH-HHHHHHHH-HH---H----HHTTCTTCC-EEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTE
T ss_pred cc-EEEEeCchHHHH-HHHHHHHH-HH---H----HhcCCCCcc-eEEEeeceECCCccccccccccccccccCCCCCcc
Confidence 55 899998888863 32222210 00 0 000134433 566655555553 33332211 123
Q ss_pred EEEecC------CCCCC-------CHHHHHHHHhhhccCCCceEEEEecccCccccccC----HHHHHHHHHHhCCeEEE
Q 038499 206 VEIGLD------DDGLL-------DIEALRSKLELYKDAKRPILGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (609)
Q Consensus 206 v~v~~~------~~g~l-------d~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~d----l~~I~~la~~~g~~viv 268 (609)
..++.. ..+.. ..+++++.+.+. ..+++..+++..+....|.+.| +++|.++|++||+++|+
T Consensus 197 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~ 275 (473)
T 4e3q_A 197 VHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE-GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVIS 275 (473)
T ss_dssp EEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH-CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEE
T ss_pred cccCCCcccccccccchhhHHHHHHHHHHHHHHHhh-CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEec
Confidence 334322 11111 124555555431 1235668888989988898866 78999999999999999
Q ss_pred eccccCCcccccCCCCC--CCCccEEEEcCCCCCCCC-CCcEEEEEechhhccCCCC-------CCccCCCceEeecccc
Q 038499 269 DFAASGPYVEIDVRSGQ--TDGYDAIFLSTHKFLGGP-GSPGILLMTKALYQLGSFP-------PSTCGGGTVNYVNGFN 338 (609)
Q Consensus 269 D~A~~~~~~~id~~~~~--~~~~D~v~~S~hK~lggp-~g~G~L~~~~~~~~l~~~~-------p~~~ggg~v~~~~~~~ 338 (609)
|+++.+...--.+-... .-..|+++++ |.++|. ..+|.+++++++.. .+. +...|+
T Consensus 276 DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~i~~--~~~~~~~~~~~~~hg~---------- 341 (473)
T 4e3q_A 276 DEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFPMGAVILGPELSK--RLETAIEAIEEFPHGF---------- 341 (473)
T ss_dssp ECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHH--HHHHHHHHHSCCCCCC----------
T ss_pred cCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCCcccccccHHHHH--HhccccccccccccCC----------
Confidence 99977532111110000 0135988876 988765 45899999998832 221 111111
Q ss_pred cccccccccccccccCCChhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh---CCCCceE-EeCCCCCCCcce
Q 038499 339 EKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIGHEVIKKQEETYIERALERL---LPNQNIK-ILGNTSTKRQAI 414 (609)
Q Consensus 339 ~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~~~~~L---~~~p~i~-v~~~~~~~r~~~ 414 (609)
...|.|--.+...+.++.. +.. .+.++.+++.+++.++| .+.|.+. +-+ +.-+
T Consensus 342 -------------T~~Gnpla~Aaala~L~~i--~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-----~Gl~ 398 (473)
T 4e3q_A 342 -------------TASGHPVGCAIALKAIDVV--MNE---GLAENVRRLAPRFEERLKHIAERPNIGEYRG-----IGFM 398 (473)
T ss_dssp -------------TTTTCHHHHHHHHHHHHHH--HHS---SHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-----ETTE
T ss_pred -------------CCCCCcchhhhhhhhhhhh--ccc---cHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-----cceE
Confidence 0123343333334444443 222 33444445555555544 4445542 221 1233
Q ss_pred EEEEeccCCCCCcCCCCCCCCCCCCC-----ChHHHHHHHhhhcCcEeccCcccCChhhhhhcCCChhHHHHHHHHHhhC
Q 038499 415 LSFNIHSSTINSSLGENTKTETDKPL-----HGPFVATLLNDLFGIQARGGCACAGPYGHHLLDLDEAQSYQIRSAIQKG 489 (609)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~GI~v~~G~~ca~p~~~~ll~i~~~~~~~~~~~~~~~ 489 (609)
+.+.+.. +.. ..... -...+.+.+.+ .|+.+++ .
T Consensus 399 ~gielv~-~~~----------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~-------~---------------------- 437 (473)
T 4e3q_A 399 WALEAVK-DKA----------SKTPFDGNLSVSERIANTCTD-LGLICRP-------L---------------------- 437 (473)
T ss_dssp EEEEECS-BTT----------TTBCCCGGGCHHHHHHHHHHH-TTEECEE-------E----------------------
T ss_pred EEEEEec-Ccc----------ccccccccHHHHHHHHHHHHH-CCcEEEe-------c----------------------
Confidence 4444332 110 11111 13467777766 4998772 1
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 490 YVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 490 ~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
...+|+..++.+|++|+|.++++|++++++.
T Consensus 438 -----g~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 438 -----GQSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp -----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2579999999999999999999998887653
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.36 E-value=1.4e-11 Score=142.19 Aligned_cols=353 Identities=14% Similarity=0.079 Sum_probs=187.9
Q ss_pred EEecCCCC------CCC-hHHHHHHHHHhhcCCccCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 79 TYADHTAS------GRS-LRYIENYIINNVLPFYGNTHTCDSYVGQHTTNMVHEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 79 vyld~~a~------g~~-~~~v~~ai~~~~~~~~~n~~~~~~~~~~~~~~~~~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
-|+|..++ |-. .+.|.+++.+++..+ . |.. ..+. +.+...++.++|+++++.+.-+.|+|+.||+++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l-~--h~~--~~~~-~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARF-G--HVM--FPEN-VYEPALKCAELLLDGVGKGWASRVYFSDNGSTA 454 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHH-S--SCC--CTTE-ECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhc-c--ccc--cccc-CCHHHHHHHHHHHHhCCCCCCCEEEECCChhHH
Confidence 48887653 445 778999998887653 2 211 0111 234455788888888875422389999999987
Q ss_pred ---HHHHHHHHhcccchhhHHHHHHhhhcCC----------CceEEEECCCCcc-chHHHHHHcCce-------------
Q 038499 152 ---AIKRLQEVMGIAVPSILREKLIKCLRDE----------ERWVVFVGPHEHH-SNLLSWRQSLAE------------- 204 (609)
Q Consensus 152 ---al~~l~~~l~~~~~~~~~~~~~~~l~~g----------d~~~Vlv~~~~h~-s~~~~~~~~G~~------------- 204 (609)
||+++.+... -+.| ++..||.-...|| ....++...|..
T Consensus 455 ~E~AlK~A~r~~~--------------~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~ 520 (831)
T 4a0g_A 455 IEIALKMAFRKFC--------------VDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTG 520 (831)
T ss_dssp HHHHHHHHHHHHH--------------HTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCC
T ss_pred HHHHHHHHHHHHH--------------hhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccC
Confidence 3333322111 0111 2335665555555 444444433310
Q ss_pred ---------------EEEEecCCC--C-------CCC------------------HHHHHHHHhhh---ccCCCceEEEE
Q 038499 205 ---------------VVEIGLDDD--G-------LLD------------------IEALRSKLELY---KDAKRPILGSF 239 (609)
Q Consensus 205 ---------------vv~v~~~~~--g-------~ld------------------~e~L~~al~~~---~~~~~~~lv~~ 239 (609)
+..++.... + .-+ +++|++.|.+. ...+++.++++
T Consensus 521 ~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~ 600 (831)
T 4a0g_A 521 RGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALII 600 (831)
T ss_dssp CEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEE
T ss_pred CccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEE
Confidence 011222110 0 001 25677777531 11245678888
Q ss_pred ecc-cCccccccC----HHHHHHHHHHhCCeEEEeccccC-CcccccC--CCCCCCCccEEEEcCCCCCCCC-CCcEEEE
Q 038499 240 SAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVEIDV--RSGQTDGYDAIFLSTHKFLGGP-GSPGILL 310 (609)
Q Consensus 240 s~~-sn~TG~~~d----l~~I~~la~~~g~~vivD~A~~~-~~~~id~--~~~~~~~~D~v~~S~hK~lggp-~g~G~L~ 310 (609)
..+ ++..|.+.+ +++|.++|++||+++|+|+++.+ |...--+ ...+ -..|+++++ |.++|. ..+|+++
T Consensus 601 Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~g-v~PDiitls--K~L~gG~~Plgav~ 677 (831)
T 4a0g_A 601 EPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLG-CKPDIACFA--KLLTGGMVPLAVTL 677 (831)
T ss_dssp CCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHS-SCCSEEEEC--GGGGTTSSCCEEEE
T ss_pred ecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcC-CCCcEEEEe--cccccCccCcEEEE
Confidence 886 888899876 89999999999999999998763 2221111 0000 135887654 999874 3579999
Q ss_pred EechhhccCCCCCCccCCCceEeecccccccccccccccccccCCChhHHHHHHHHHHHHHHHhcC-HHHHHHHHHHH--
Q 038499 311 MTKALYQLGSFPPSTCGGGTVNYVNGFNEKDTLYLEDIEERESGGTPQVIQMIRAALAFWVKEYIG-HEVIKKQEETY-- 387 (609)
Q Consensus 311 ~~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~r~~~gtp~i~~~~~aal~~~~~~~~g-~~~i~~~~~~l-- 387 (609)
++++++ +.+.+.... .. +. ......|.|-..+...++++.+. ..+ .+.+.+....+
T Consensus 678 ~~~~i~--~~~~~~~~~-~~-------------~~---hg~T~~g~Pla~Aaala~L~~i~--~~~l~~~~~~~~~~l~~ 736 (831)
T 4a0g_A 678 ATDAVF--DSFSGDSKL-KA-------------LL---HGHSYSAHAMGCATAAKAIQWFK--DPETNHNITSQGKTLRE 736 (831)
T ss_dssp ECHHHH--HTTCSSCGG-GS-------------CC---CCCTTTTCHHHHHHHHHHHHHHH--CTTTCTTBCTTSSBBCC
T ss_pred ECHHHH--HHHhccccc-cc-------------ce---eecCCcccHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHH
Confidence 999983 333221000 00 00 00011334444444455555442 111 11111111111
Q ss_pred --HHHHHHHhCCCCceEEeCCCCCCCcceEEEEeccCCCCCcCCCCCCCCCCC--CCChHHHHHHHhhhcCcEeccCccc
Q 038499 388 --IERALERLLPNQNIKILGNTSTKRQAILSFNIHSSTINSSLGENTKTETDK--PLHGPFVATLLNDLFGIQARGGCAC 463 (609)
Q Consensus 388 --~~~~~~~L~~~p~i~v~~~~~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~--~l~~~~v~~~L~~~~GI~v~~G~~c 463 (609)
.+.+.+.+.+.|.+.-+.. ...++.+.+.. +.. ... ......+.+.|.+ .||.++++
T Consensus 737 ~l~~~l~~~l~~~~~v~~vrg----~Gl~~~iel~~-~~~----------~~~~~~~~a~~~~~~l~e-~Gv~v~p~--- 797 (831)
T 4a0g_A 737 LWDEELVQQISSHSAVQRVVV----IGTLFALELKA-DAS----------NSGYASLYAKSLLIMLRE-DGIFTRPL--- 797 (831)
T ss_dssp CSCHHHHHHHHHSTTEEEEEE----ETTEEEEEEC--------------------CHHHHHHHHHHHH-TTEECCCB---
T ss_pred HHHHHHHHHHhhCCCceeEee----cccEEEEEEec-Ccc----------ccccchHHHHHHHHHHHH-CCcEEEec---
Confidence 1223344444555533211 22344444433 100 000 0124567777866 59998832
Q ss_pred CChhhhhhcCCChhHHHHHHHHHhhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 038499 464 AGPYGHHLLDLDEAQSYQIRSAIQKGYVGVKPGWTRISFPYYMSNEEFEFTLEALEFIAIYG 525 (609)
Q Consensus 464 a~p~~~~ll~i~~~~~~~~~~~~~~~~~~~~~g~iRls~~~~~t~eeid~ll~al~~v~~~~ 525 (609)
.+.+|+++++.+|++|+++++++|+++++..
T Consensus 798 -------------------------------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 798 -------------------------------GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -------------------------------TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred -------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2689999999999999999999999987654
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=51.36 E-value=53 Score=29.03 Aligned_cols=56 Identities=18% Similarity=0.072 Sum_probs=41.2
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG 263 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g 263 (609)
++..|.+|+....+ +.++++.+++.+ .++.+|.+|... |.....++++.+.+++.|
T Consensus 42 l~~~G~eVi~lG~~----~p~e~lv~aa~~----~~~diV~lS~~~--~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 42 LRDAGFEVVYTGLR----QTPEQVAMAAVQ----EDVDVIGVSILN--GAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHTTCEEECCCSB----CCHHHHHHHHHH----TTCSEEEEEESS--SCHHHHHHHHHHHHHHTT
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHh----cCCCEEEEEeec--hhhHHHHHHHHHHHHhcC
Confidence 45679999877654 688999888876 578888887653 344566788888888754
No 238
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=51.03 E-value=30 Score=32.39 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHH-HHc
Q 038499 123 VHEASNYIKKCLGGGQEDAMIFCGSGTTAAIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSW-RQS 201 (609)
Q Consensus 123 ~~e~r~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-~~~ 201 (609)
++++.+.+.+.+|.+....+++.|.|..+.. ++..+.. -..+=+++-++++...+ .. .- ...
T Consensus 68 V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~a--La~~~~~-------------~~~g~~iVg~~D~dp~~-ki-G~~~i~ 130 (212)
T 3keo_A 68 VKKLMNFFAEILNDHSTTNVMLVGCGNIGRA--LLHYRFH-------------DRNKMQISMAFDLDSND-LV-GKTTED 130 (212)
T ss_dssp HHHHHHHHHHHTTTTSCEEEEEECCSHHHHH--HTTCCCC-------------TTSSEEEEEEEECTTST-TT-TCBCTT
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECcCHHHHH--HHHhhhc-------------ccCCeEEEEEEeCCchh-cc-CceeEC
Confidence 5667788888999876657888888876521 2221110 01122234444433221 00 00 112
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEEeccccC
Q 038499 202 LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (609)
Q Consensus 202 G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~ 274 (609)
|..|. ++++|++.+++ .++..++++.|+. ..+++++.|.+.|+.-||.+|...
T Consensus 131 GvpV~----------~~~dL~~~v~~----~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nFap~~ 183 (212)
T 3keo_A 131 GIPVY----------GISTINDHLID----SDIETAILTVPST------EAQEVADILVKAGIKGILSFSPVH 183 (212)
T ss_dssp CCBEE----------EGGGHHHHC-C----CSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEECSSSC
T ss_pred CeEEe----------CHHHHHHHHHH----cCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEcCCcc
Confidence 44333 23567777774 4677888877654 257899999999999999998543
No 239
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=43.77 E-value=98 Score=28.37 Aligned_cols=78 Identities=15% Similarity=0.033 Sum_probs=52.5
Q ss_pred EEECCCCccchHH-----HHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHH
Q 038499 184 VFVGPHEHHSNLL-----SWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARL 258 (609)
Q Consensus 184 Vlv~~~~h~s~~~-----~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~l 258 (609)
+.+.+.+.|..-. .++..|.+|+.+..+ +.++++.+++.+ .++.+|.+|.-. |.....++++.+.
T Consensus 93 l~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~----vp~~~l~~~~~~----~~~d~v~lS~~~--~~~~~~~~~~i~~ 162 (210)
T 1y80_A 93 LGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD----IEPGKFVEAVKK----YQPDIVGMSALL--TTTMMNMKSTIDA 162 (210)
T ss_dssp EEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS----BCHHHHHHHHHH----HCCSEEEEECCS--GGGTHHHHHHHHH
T ss_pred EEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccc--cccHHHHHHHHHH
Confidence 3344445554332 245679999988754 688999888876 478888888643 3345567888888
Q ss_pred HHHhC----CeEEEecc
Q 038499 259 LHQYG----GFACFDFA 271 (609)
Q Consensus 259 a~~~g----~~vivD~A 271 (609)
+++.+ +.+++=++
T Consensus 163 l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 163 LIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHTTCGGGCEEEEEST
T ss_pred HHhcCCCCCCeEEEECC
Confidence 88765 66666554
No 240
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=37.02 E-value=1.1e+02 Score=28.32 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=52.4
Q ss_pred EEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEE--ecccCccccccCHHHHH
Q 038499 184 VFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSF--SACSNVTGIYSDTRSIA 256 (609)
Q Consensus 184 Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~--s~~sn~TG~~~dl~~I~ 256 (609)
+.+.+.+.|..- ..++..|.+|+....+ +.++++.+++.+ .++.++.+ |.. .|.....++++.
T Consensus 97 l~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~----vp~e~iv~~~~~----~~~d~v~l~~S~l--~~~~~~~~~~~i 166 (215)
T 3ezx_A 97 TFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD----VLNENVVEEAAK----HKGEKVLLVGSAL--MTTSMLGQKDLM 166 (215)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS----CCHHHHHHHHHH----TTTSCEEEEEECS--SHHHHTHHHHHH
T ss_pred EEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC----CCHHHHHHHHHH----cCCCEEEEEchhc--ccCcHHHHHHHH
Confidence 334455666543 2346689999988765 678999887776 57788888 654 334555688888
Q ss_pred HHHHHhC----CeEEEecc
Q 038499 257 RLLHQYG----GFACFDFA 271 (609)
Q Consensus 257 ~la~~~g----~~vivD~A 271 (609)
+.+++.| +.+++=++
T Consensus 167 ~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 167 DRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp HHHHHTTCGGGSEEEEESS
T ss_pred HHHHHcCCCCCCEEEEECC
Confidence 8888875 45665544
No 241
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.04 E-value=3.7e+02 Score=26.11 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=36.0
Q ss_pred HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecc-cCccccccCHHHHHHHHHHhC-CeEEE
Q 038499 199 RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSAC-SNVTGIYSDTRSIARLLHQYG-GFACF 268 (609)
Q Consensus 199 ~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~-sn~TG~~~dl~~I~~la~~~g-~~viv 268 (609)
...+++++..++. |.+++.+++++ .++.+|+.++. .|..| ...|.+.|++.| +..++
T Consensus 58 ~~~~v~~~~~Dl~-----d~~~l~~~~~~----~~~d~Vi~~a~~~n~~~----~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 58 EDKGAIIVYGLIN-----EQEAMEKILKE----HEIDIVVSTVGGESILD----QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp HHTTCEEEECCTT-----CHHHHHHHHHH----TTCCEEEECCCGGGGGG----HHHHHHHHHHHCCCSEEE
T ss_pred HhCCcEEEEeecC-----CHHHHHHHHhh----CCCCEEEECCchhhHHH----HHHHHHHHHHcCCceEEe
Confidence 3457777666554 78999999884 23444444333 34433 468899999988 65444
No 242
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=27.95 E-value=1.8e+02 Score=27.58 Aligned_cols=76 Identities=17% Similarity=0.162 Sum_probs=49.0
Q ss_pred EEECCCCccchH-----HHHHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHH
Q 038499 184 VFVGPHEHHSNL-----LSWRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARL 258 (609)
Q Consensus 184 Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~l 258 (609)
+.+.+.+.|..- ..++..|.+|+.+..+ +.++++.+++.+ .++.+|.+|.... .....++++.+.
T Consensus 128 la~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~----vp~e~l~~~~~~----~~~d~V~lS~l~~--~~~~~~~~~i~~ 197 (258)
T 2i2x_B 128 CHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD----VPAEEVLAAVQK----EKPIMLTGTALMT--TTMYAFKEVNDM 197 (258)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE----CCSHHHHHHHHH----HCCSEEEEECCCT--TTTTHHHHHHHH
T ss_pred EEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEEeecc--CCHHHHHHHHHH
Confidence 333444555433 2345689999988764 567888777775 4788888876543 345567888888
Q ss_pred HHHhC--CeEEEe
Q 038499 259 LHQYG--GFACFD 269 (609)
Q Consensus 259 a~~~g--~~vivD 269 (609)
+++.| +.+++=
T Consensus 198 l~~~~~~~~v~vG 210 (258)
T 2i2x_B 198 LLENGIKIPFACG 210 (258)
T ss_dssp HHTTTCCCCEEEE
T ss_pred HHhcCCCCcEEEE
Confidence 88754 444443
No 243
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=27.57 E-value=1.4e+02 Score=28.86 Aligned_cols=74 Identities=8% Similarity=-0.033 Sum_probs=43.1
Q ss_pred CccchHHHHHHcCceEEEEe-cCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhCCeEEE
Q 038499 190 EHHSNLLSWRQSLAEVVEIG-LDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (609)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v~-~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g~~viv 268 (609)
.|++...-.+.+|.+.+.+. +.++....+.+|.+.++.-+ ..+.++|++....++ --.+.|.+++++.|+.+++
T Consensus 169 ~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik-~~~v~~if~e~~~~~----~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 169 PHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLII-DHNIKAIFTESTTNP----ERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp SSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHH-HHTCCEEECBTTSCT----HHHHHHHHHHHTTSCCCEE
T ss_pred ECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHH-HcCCCEEEEeCCCCh----HHHHHHHHHHHhcCCceEE
Confidence 46666667888999987543 33344556666555443211 136777665432221 1256788888988876543
No 244
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=25.97 E-value=3.6e+02 Score=25.80 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=46.5
Q ss_pred HHHc-CceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccc-cccCHHHHHHHHHHhC----CeEEEecc
Q 038499 198 WRQS-LAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTG-IYSDTRSIARLLHQYG----GFACFDFA 271 (609)
Q Consensus 198 ~~~~-G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG-~~~dl~~I~~la~~~g----~~vivD~A 271 (609)
++.. |.+|+.+..+ +.++++.+++.+ .++.+|.+|...+..- ....+.++.+.+++.| +.+++=++
T Consensus 152 L~~~~G~eVi~LG~~----vp~e~iv~aa~e----~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQ----VANEDFIKKAVE----LEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp GGGCTTEEEEECCSS----BCHHHHHHHHHH----TTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred HHhcCCcEEEECCCC----CCHHHHHHHHHH----cCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 4566 8888887654 688998888876 5788888876543211 3455778888888866 67776665
No 245
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=25.55 E-value=88 Score=26.64 Aligned_cols=64 Identities=13% Similarity=-0.038 Sum_probs=43.6
Q ss_pred HHHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC---CeEEEecc
Q 038499 198 WRQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG---GFACFDFA 271 (609)
Q Consensus 198 ~~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g---~~vivD~A 271 (609)
++..|.+|+....+ +.++++.+++.+ .++.++.+|.... .....++++.+.+++.| +.+++=++
T Consensus 27 l~~~G~~Vi~lG~~----~p~e~~v~~a~~----~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 27 FTNAGFNVVNIGVL----SPQELFIKAAIE----TKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHTTCEEEEEEEE----ECHHHHHHHHHH----HTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHh----cCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56689999988754 578888888875 4677888876543 23334667777777754 45555444
No 246
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=25.38 E-value=34 Score=35.83 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=27.6
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
+.+.-|...+++++++.||++|+.||+|.+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 556789999999999999999999999987
No 247
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=22.23 E-value=1.9e+02 Score=27.77 Aligned_cols=60 Identities=10% Similarity=-0.077 Sum_probs=38.9
Q ss_pred CHHHHHHHHhhhccCCCceEEEEe-c--c-cCccccccCHHHHHHHHHHhCCeEEEeccccCCc
Q 038499 217 DIEALRSKLELYKDAKRPILGSFS-A--C-SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (609)
Q Consensus 217 d~e~L~~al~~~~~~~~~~lv~~s-~--~-sn~TG~~~dl~~I~~la~~~g~~vivD~A~~~~~ 276 (609)
+++++..++..-...++..++++. . + +|.+=...++..|..+.+..++.+++|..|+.+.
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 788887777543333455554443 1 2 2333334677888887777799999999999764
No 248
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=22.09 E-value=3.7e+02 Score=26.83 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=31.8
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|-++ ++..+...+|+ +.+|+++...-......++..|++|+.++-
T Consensus 95 ~vv~aSsGN~g~alA~aa~~~G~------------------~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~ 147 (364)
T 4h27_A 95 HFVCSSSGNAGMAAAYAARQLGV------------------PATIVVPGTTPALTIERLKNEGATVKVVGE 147 (364)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTC------------------CEEEEEETTSCHHHHHHHHTTTCEEEEECS
T ss_pred EEEEeCCChHHHHHHHHHHHhCC------------------ceEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 55555455443 55555555542 336777765544555667778999998863
No 249
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=21.98 E-value=43 Score=34.97 Aligned_cols=31 Identities=10% Similarity=-0.084 Sum_probs=27.4
Q ss_pred cccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 241 ~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
.+...-|...+++++++.||++|+.||+|.+
T Consensus 56 ~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 56 ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455678999999999999999999999987
No 250
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=21.91 E-value=1.3e+02 Score=30.08 Aligned_cols=26 Identities=35% Similarity=0.669 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 038499 124 HEASNYIKKCLGGGQEDAMIFCGSGTTA 151 (609)
Q Consensus 124 ~e~r~~ia~~~g~~~~~~vift~sGtta 151 (609)
.+..+.+.++.+-++. -|+|| ||||+
T Consensus 25 ~~~~~~~~~w~~d~~a-~Il~T-SGTTG 50 (358)
T 4gs5_A 25 AQAYDFMEKWLGGARE-FVLHT-SGSTG 50 (358)
T ss_dssp HHHHHHHHHHHHTCSE-EEEEE-ECTTS
T ss_pred cchhhHhhccCCCCCE-EEEEC-Ccccc
Confidence 3445556777777766 78898 89996
No 251
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=21.69 E-value=71 Score=32.07 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=36.5
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-+++|-++ ++..+...+|+ +.+|+++...-.......+.+|++|+.++.
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~G~------------------~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMKGY------------------KMVLTMPSYTSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTC------------------EEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred EEEEeCCcHHHHHHHHHHHHcCC------------------cEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 46655566554 66666666663 337888777666677778889999998864
No 252
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=21.33 E-value=5.3e+02 Score=24.45 Aligned_cols=56 Identities=16% Similarity=-0.018 Sum_probs=34.1
Q ss_pred HHcCceEEEEecCCCCCCCHHHHHHHHhhhccCCCceEEEEecccCccccccCHHHHHHHHHHhC-CeEEE
Q 038499 199 RQSLAEVVEIGLDDDGLLDIEALRSKLELYKDAKRPILGSFSACSNVTGIYSDTRSIARLLHQYG-GFACF 268 (609)
Q Consensus 199 ~~~G~~vv~v~~~~~g~ld~e~L~~al~~~~~~~~~~lv~~s~~sn~TG~~~dl~~I~~la~~~g-~~viv 268 (609)
...|++++..++. |.+.|.++++. ..+|+.++.. .. +.-...+.+.|++.| +.-++
T Consensus 56 ~~~~v~~v~~Dl~-----d~~~l~~a~~~------~d~vi~~a~~--~~-~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 56 QSLGAIIVKGELD-----EHEKLVELMKK------VDVVISALAF--PQ-ILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp HHTTCEEEECCTT-----CHHHHHHHHTT------CSEEEECCCG--GG-STTHHHHHHHHHHHCCCCEEE
T ss_pred hcCCCEEEEecCC-----CHHHHHHHHcC------CCEEEECCch--hh-hHHHHHHHHHHHhcCCCCEEE
Confidence 3457777666554 78899999872 3444333321 11 344678889998887 54333
No 253
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=21.06 E-value=5.4e+02 Score=26.44 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=33.6
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccchhhHHHHHHhhhcCCCceEEEECCCCccchHHHHHHcCceEEEEec
Q 038499 141 AMIFCGSGTTA-AIKRLQEVMGIAVPSILREKLIKCLRDEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGL 210 (609)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (609)
.|+-.++|-++ ++......+|+ +.+|+++...-.......+..|++|+.++-
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~------------------~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~ 214 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGF------------------KVTVHMSADARAWKKAKLRSHGVTVVEYEQ 214 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTC------------------EEEEEEETTSCHHHHHHHHHTTCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHhCC------------------cEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 45555555444 55555555553 336777776555566677889999998874
No 254
>3o2i_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Leptospirillum rubarum}
Probab=20.71 E-value=1.6e+02 Score=23.33 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=21.4
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHH
Q 038499 495 PGWTRISFPYYMSNEEFEFTLEAL 518 (609)
Q Consensus 495 ~g~iRls~~~~~t~eeid~ll~al 518 (609)
.|.+||+++.-.++.++...++++
T Consensus 93 GGL~~I~~P~E~SK~~V~~~i~~~ 116 (125)
T 3o2i_A 93 GGLQEIGFPGELSKTEVRRRINAF 116 (125)
T ss_dssp CCEEEEEEETTCCHHHHHHHHHHH
T ss_pred CCeEEecCchhhhHHHHHHHHHHH
Confidence 589999999999999999988875
No 255
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=20.67 E-value=51 Score=34.22 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=27.2
Q ss_pred cccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 241 ~~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
.++..-|...+++++++.||++|+.||+|.+
T Consensus 61 ~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 61 SFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp EECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455678899999999999999999999987
No 256
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=20.22 E-value=52 Score=34.68 Aligned_cols=30 Identities=17% Similarity=0.044 Sum_probs=26.6
Q ss_pred ccCccccccCHHHHHHHHHHhCCeEEEecc
Q 038499 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (609)
Q Consensus 242 ~sn~TG~~~dl~~I~~la~~~g~~vivD~A 271 (609)
+...-|...+++++++.||++|+.||+|.+
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 444568889999999999999999999987
Done!