BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038501
(106 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKH------PRDFVS-SILPSSSVINIPLDEMLDPRFPPP 68
++TEK DVYSFGV+ EV+ + PR+ V+ + S N L++++DP
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 69 -SPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
P+ L + A CL S E RP+M V +L
Sbjct: 277 IRPE---SLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKH------PRDFVS-SILPSSSVINIPLDEMLDPRFPPP 68
++TEK DVYSFGV+ EV+ + PR+ V+ + S N L++++DP
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 69 -SPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
P+ L + A CL S E RP+M V +L
Sbjct: 277 IRPE---SLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLDEMLDPRFPPP 68
E+ + K + K DV++FG+L EV GK P D ++ S V+ + L P
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN---SEVVLKVSQGHRLYR--PHL 229
Query: 69 SPDVQGKLISIMEVAFSCLDASPESRPTMQTV 100
+ D +I ++ +SC PE RPT Q +
Sbjct: 230 ASD------TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 10 ELAYSMKITEKCDVYSFGVLALE-VIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPP 68
E A + T K DV+SFG+L E V KG+ +P + N + E ++ + P
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGR---------VPYPGMNNREVLEQVERGYRMP 226
Query: 69 SPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
P Q IS+ E+ C PE RPT +
Sbjct: 227 CP--QDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
TEK D YSF ++ ++ G+ P D S IN+ +E L P P P +L
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS--YGKIKFINMIREEGLRPTIPEDCPP---RLR 260
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQL 104
+++E+ C P+ RP + ++L
Sbjct: 261 NVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
TEK D YSF ++ ++ G+ P D S IN+ +E L P P P +L
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS--YGKIKFINMIREEGLRPTIPEDCPP---RLR 260
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQL 104
+++E+ C P+ RP + ++L
Sbjct: 261 NVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
TEK D YSF ++ ++ G+ P D S IN+ +E L P P P +L
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS--YGKIKFINMIREEGLRPTIPEDCPP---RLR 260
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQL 104
+++E+ C P+ RP + ++L
Sbjct: 261 NVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 31/108 (28%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHP--------------RDFVSSILPSSSVINIPLDEML 61
K +EK DV+ +GV+ LE+I G+ D+V +L L+ ++
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-----LEALV 265
Query: 62 DPRFPPPSPDVQG-----KLISIMEVAFSCLDASPESRPTMQTVTQQL 104
D D+QG ++ +++VA C +SP RP M V + L
Sbjct: 266 D-------VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFV-----SSILPSSSVINIPLDEMLDPRFPPPSP 70
K +EK DV+ +GV+ LE+I G+ D ++ V + ++ L+
Sbjct: 219 KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV---DV 275
Query: 71 DVQG-----KLISIMEVAFSCLDASPESRPTMQTVTQQL 104
D+QG ++ +++VA C +SP RP M V + L
Sbjct: 276 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E+ EK DV+SFG++ E+I G+ D LP + + + LD PP
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GRVNAD--PDYLPRTMDFGLNVRGFLDRYCPPNC 248
Query: 70 PDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
P S + C D PE RP+ + L
Sbjct: 249 PP------SFFPITVRCCDLDPEKRPSFVKLEHWL 277
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
+EKCDV+S+G++ EVI + P D + P+ + + + + PP ++ +
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGG--PAFRI----MWAVHNGTRPPLIKNLPKPIE 234
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQ 102
S+M C P RP+M+ + +
Sbjct: 235 SLMT---RCWSKDPSQRPSMEEIVK 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
+EKCDV+S+G++ EVI + P D + P+ + + + + PP ++ +
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGG--PAFRI----MWAVHNGTRPPLIKNLPKPIE 235
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQ 102
S+M C P RP+M+ + +
Sbjct: 236 SLMT---RCWSKDPSQRPSMEEIVK 257
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 14 SMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPS-- 69
+ + T K DV+SFGVL E++ P P + L L R P P
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAP--------PYRHIDPFDLTHFLAQGRRLPQPEYC 253
Query: 70 PDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
PD S+ +V C +A P RPT + + ++
Sbjct: 254 PD------SLYQVMQQCWEADPAVRPTFRVLVGEV 282
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 12 AYSMKITEKCDVYSFGVLALEVIKG-------KHPRDFVSSILPSSSVINIPLDEMLDPR 64
A +IT K D+YSFGV+ LE+I G + P+ + D +
Sbjct: 200 ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 259
Query: 65 FPPPSPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
S V+ ++ VA CL RP ++ V Q L+
Sbjct: 260 NDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI 77
++ DV+S+GVL E++ G+ P + + + + ++++ P P P+ KL+
Sbjct: 192 SKGSDVWSYGVLLWELLTGEVPFRGIDGL---AVAYGVAMNKLALP-IPSTCPEPFAKLM 247
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQL 104
C + P SRP+ + QL
Sbjct: 248 E------DCWNPDPHSRPSFTNILDQL 268
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 12 AYSMKITEKCDVYSFGVLALEVIKG-------KHPRDFVSSILPSSSVINIPLDEMLDPR 64
A +IT K D+YSFGV+ LE+I G + P+ + D +
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 65 FPPPSPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
S V+ ++ VA CL RP ++ V Q L+
Sbjct: 266 NDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 12 AYSMKITEKCDVYSFGVLALEVIKG-------KHPRDFVSSILPSSSVINIPLDEMLDPR 64
A +IT K D+YSFGV+ LE+I G + P+ + D +
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 65 FPPPSPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
S V+ ++ VA CL RP ++ V Q L+
Sbjct: 266 NDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 21 CDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS---PDVQGKLI 77
D++S G+ A+E+ +GK P + I P ++ IP + PPP+ P++
Sbjct: 206 ADIWSLGITAIEMAEGKPP---YADIHPMRAIFMIPTN-------PPPTFRKPELWSD-- 253
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQ 103
+ + CL SPE R T + Q
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQH 279
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 32.7 bits (73), Expect = 0.047, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 401
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 402 CPPECPE------SLHDLMCQCWRKEPEERPTFE 429
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 401
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 402 CPPECPE------SLHDLMCQCWRKEPEERPTFE 429
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 352 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 402
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 403 CPPECPE------SLHDLMCQCWRKDPEERPTFE 430
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 232
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 233 CPPECPE------SLHDLMCQCWRKEPEERPTFE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 232
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 233 CPPECPE------SLHDLMCQCWRKEPEERPTFE 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 32.7 bits (73), Expect = 0.051, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 401
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 402 CPPECPE------SLHDLMCQCWRKEPEERPTFE 429
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 178 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 228
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 229 -THVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 200 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 250
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 251 -THVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 180 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 230
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 231 -THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 180 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 230
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 231 -THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 178 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 228
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 229 CPPECPE------SLHDLMCQCWRKEPEERPTFE 256
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 175 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 225
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 226 CPPECPE------SLHDLMCQCWRKEPEERPTFE 253
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 232 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 283
Query: 75 KLISIMEVAFSCLDASPESRPTMQTV 100
+ SIM+ +C P RPT Q +
Sbjct: 284 -IYSIMQ---ACWALEPTHRPTFQQI 305
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 235
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 236 CPPECPE------SLHDLMCQCWRKDPEERPTFE 263
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 12 AYSMKITEKCDVYSFGVLALEVIKG-------KHPRDFVSSILPSSSVINIPLDEMLDPR 64
A +IT K D+YSFGV+ LE+I G + P+ + D +
Sbjct: 197 ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKX 256
Query: 65 FPPPSPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
S V+ + VA CL RP ++ V Q L+
Sbjct: 257 NDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 226
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 227 CPPECPE------SLHDLMCQCWRKDPEERPTFE 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 183 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 233
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 234 -THVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 224
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 225 CPPECPE------SLHDLMCQCWRKDPEERPTFE 252
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGK 75
+ + K DV+SFGVL EV F +P + N + E + F P +
Sbjct: 181 RYSSKSDVWSFGVLMWEV--------FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS- 231
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ ++ C PE RP + +QL
Sbjct: 232 -THVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 32.3 bits (72), Expect = 0.063, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEV-IKGKHPRDFVSSILPSSSVINIPLDEMLDPRF--- 65
E A + T K DV+SFG+L E+ KG+ +P ++N + + ++ +
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGR---------VPYPGMVNREVLDQVERGYRMP 484
Query: 66 -PPPSPDVQGKLISIMEVAFSCLDASPESRPTMQ 98
PP P+ S+ ++ C PE RPT +
Sbjct: 485 CPPECPE------SLHDLMCQCWRKEPEERPTFE 512
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 240 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 291
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ SIM+ +C P RPT Q + L+
Sbjct: 292 -IYSIMQ---ACWALEPTHRPTFQQICSFLQ 318
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 295
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ SIM+ +C P RPT Q + L+
Sbjct: 296 -IYSIMQ---ACWALEPTHRPTFQQICSFLQ 322
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 295
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ SIM+ +C P RPT Q + L+
Sbjct: 296 -IYSIMQ---ACWALEPTHRPTFQQICSFLQ 322
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.3 bits (72), Expect = 0.072, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 289
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ SIM+ +C P RPT Q + L+
Sbjct: 290 -IYSIMQ---ACWALEPTHRPTFQQICSFLQ 316
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 32.3 bits (72), Expect = 0.073, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 18 TEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLD--EMLDPRFPPPSPDVQG 74
T + DV+S+G+L E+ G +P IL +S + D +M P F P +
Sbjct: 246 TVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKN----- 297
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ SIM+ +C P RPT Q + L+
Sbjct: 298 -IYSIMQ---ACWALEPTHRPTFQQICSFLQ 324
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISI 79
K D++S G+ A+E+ KG+ P S + P + IP + PP+ + Q
Sbjct: 196 KADIWSLGITAIELAKGEPPN---SDLHPMRVLFLIPKNS-------PPTLEGQHSK-PF 244
Query: 80 MEVAFSCLDASPESRPTMQTVTQQ 103
E +CL+ P RPT + + +
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLKH 268
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDE--MLDPRFPPPSPDVQGKLI 77
K D++S G+ A+E+ +G+ P S + P + IP + L+ + P
Sbjct: 184 KADIWSLGITAIELARGEPPH---SELHPMKVLFLIPKNNPPTLEGNYSKP--------- 231
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQ 103
+ E +CL+ P RPT + + +
Sbjct: 232 -LKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.0 bits (71), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDE--MLDPRFPPPSPDVQGKLI 77
K D++S G+ A+E+ +G+ P S + P + IP + L+ + P
Sbjct: 184 KADIWSLGITAIELARGEPPH---SELHPMKVLFLIPKNNPPTLEGNYSKP--------- 231
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQ 103
+ E +CL+ P RPT + + +
Sbjct: 232 -LKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDE--MLDPRFPPPSPDVQGKLI 77
K D++S G+ A+E+ +G+ P S + P + IP + L+ + P
Sbjct: 204 KADIWSLGITAIELARGEPPH---SELHPMKVLFLIPKNNPPTLEGNYSKP--------- 251
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQ 103
+ E +CL+ P RPT + + +
Sbjct: 252 -LKEFVEACLNKEPSFRPTAKELLKH 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDE--MLDPRFPPPSPDVQGKLI 77
K D++S G+ A+E+ +G+ P S + P + IP + L+ + P
Sbjct: 199 KADIWSLGITAIELARGEPPH---SELHPMKVLFLIPKNNPPTLEGNYSKP--------- 246
Query: 78 SIMEVAFSCLDASPESRPTMQTVTQQ 103
+ E +CL+ P RPT + + +
Sbjct: 247 -LKEFVEACLNKEPSFRPTAKELLKH 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP-DVQGKL 76
T K DV+SFG+L +E++ +P + N + L+ + P P + +L
Sbjct: 190 TIKSDVWSFGILLMEIV--------TYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 241
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQL 104
+IM C PE RPT + + L
Sbjct: 242 YNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 16 KITEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQG 74
K T + DV+SFGV+ E+ GK P +S+ + E+ PR PP
Sbjct: 207 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG--RELERPRACPP------ 258
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
++ +IM C P+ R +++ V +L+
Sbjct: 259 EVYAIMR---GCWQREPQQRHSIKDVHARLQ 286
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 16 KITEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQG 74
K T + DV+SFGV+ E+ GK P +S+ + E+ PR PP
Sbjct: 213 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG--RELERPRACPP------ 264
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
++ +IM C P+ R +++ V +L+
Sbjct: 265 EVYAIMR---GCWQREPQQRHSIKDVHARLQ 292
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 17 ITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP-DVQGK 75
T K DV+SFG+L +E++ +P + N + L+ + P P + +
Sbjct: 346 FTIKSDVWSFGILLMEIV--------TYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE 397
Query: 76 LISIMEVAFSCLDASPESRPTMQTV 100
L +IM C PE RPT + +
Sbjct: 398 LYNIM---MRCWKNRPEERPTFEYI 419
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L +E++ +P + N + L+ + P P+ +L
Sbjct: 363 TIKSDVWSFGILLMEIV--------TYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 414
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQL 104
+IM C PE RPT + + L
Sbjct: 415 YNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLD----EMLDPRFPPPSPD-V 72
T + DV+S+G+ E+ L SS +P+D +M+ F SP+
Sbjct: 243 TFESDVWSYGIFLWELFS-----------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 291
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
++ IM+ +C DA P RPT + + Q
Sbjct: 292 PAEMYDIMK---TCWDADPLKRPTFKQIVQ 318
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLD----EMLDPRFPPPSPD-V 72
T + DV+S+G+ E+ L SS +P+D +M+ F SP+
Sbjct: 248 TFESDVWSYGIFLWELFS-----------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 296
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
++ IM+ +C DA P RPT + + Q
Sbjct: 297 PAEMYDIMK---TCWDADPLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLD----EMLDPRFPPPSPD-V 72
T + DV+S+G+ E+ L SS +P+D +M+ F SP+
Sbjct: 248 TFESDVWSYGIFLWELFS-----------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 296
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
++ IM+ +C DA P RPT + + Q
Sbjct: 297 PAEMYDIMK---TCWDADPLKRPTFKQIVQ 323
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISI 79
K D++S G+ A+E+ KG+ P S + P + IP + PP+ V S
Sbjct: 200 KADIWSLGITAIELAKGEPPN---SDMHPMRVLFLIPKNN-------PPTL-VGDFTKSF 248
Query: 80 MEVAFSCLDASPESRPTMQTVTQQ 103
E +CL+ P RPT + + +
Sbjct: 249 KEFIDACLNKDPSFRPTAKELLKH 272
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLD----EMLDPRFPPPSPD-V 72
T + DV+S+G+ E+ L SS +P+D +M+ F SP+
Sbjct: 225 TFESDVWSYGIFLWELFS-----------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 273
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
++ IM+ +C DA P RPT + + Q
Sbjct: 274 PAEMYDIMK---TCWDADPLKRPTFKQIVQ 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLD----EMLDPRFPPPSPD-V 72
T + DV+S+G+ E+ L SS +P+D +M+ F SP+
Sbjct: 241 TFESDVWSYGIFLWELFS-----------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 289
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
++ IM+ +C DA P RPT + + Q
Sbjct: 290 PAEMYDIMK---TCWDADPLKRPTFKQIVQ 316
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 230 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 277
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 278 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 222 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 269
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 270 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 219 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 266
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 267 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 230 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 277
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 278 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSV--INIPLDEMLDPRFPPPSPDVQGK 75
EK DVYSFGV+ E+ + P ++ P+ V + + PR ++ +
Sbjct: 217 NEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGFKCKRLEIPR------NLNPQ 267
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ +I+E C P RP+ T+ LR
Sbjct: 268 VAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 223 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 270
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 271 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 299
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 215 THQSDVWSFGVLLWEIF-----------TLGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 262
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 263 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 291
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSV--INIPLDEMLDPRFPPPSPDVQGK 75
EK DVYSFGV+ E+ + P ++ P+ V + + PR ++ +
Sbjct: 217 NEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGFKCKRLEIPR------NLNPQ 267
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQLR 105
+ +I+E C P RP+ T+ LR
Sbjct: 268 VAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 269
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 270 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 296
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K DV++FGV E+ + P V N + + L R P +
Sbjct: 227 TSKSDVWAFGVTMWEIA--------TRGMTPYPGVQNHEMYDYLLHGHRLKQP----EDC 274
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
L + E+ +SC P RPT + QL
Sbjct: 275 LDELYEIMYSCWRTDPLDRPTFSVLRLQL 303
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI-- 77
K D++SFG+ A+E+ G P P V+ + L DP P VQ K +
Sbjct: 207 KADIWSFGITAIELATGAAPY----HKYPPMKVLMLTLQN--DP--PSLETGVQDKEMLK 258
Query: 78 ----SIMEVAFSCLDASPESRPT 96
S ++ CL PE RPT
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLI-- 77
K D++SFG+ A+E+ G P P V+ + L DP P VQ K +
Sbjct: 202 KADIWSFGITAIELATGAAP----YHKYPPMKVLMLTLQN--DP--PSLETGVQDKEMLK 253
Query: 78 ----SIMEVAFSCLDASPESRPT 96
S ++ CL PE RPT
Sbjct: 254 KYGKSFRKMISLCLQKDPEKRPT 276
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 226 THQSDVWSFGVLMWEIF-----------TLGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 273
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 274 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 302
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 229 THQSDVWSFGVLMWEIF-----------TLGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 276
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 277 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 305
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 256
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 257 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML-----DPRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 224 THQSDVWSFGVLMWEIF-----------TLGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 271
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 272 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 300
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 259
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 260 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 261
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 262 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 283
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 284 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 310
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 264
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 265 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 264
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 265 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 264
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 265 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 263
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 264 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 262
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 263 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 262
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 263 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 188 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 240 YQLMRL---CWKERPEDRPT 256
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 263
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 264 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 184 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 235
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 236 YQLMRL---CWKERPEDRPT 252
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 183 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 234
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 235 YQLMRL---CWKERPEDRPT 251
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 264
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 265 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 189 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 240
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 241 YQLMRL---CWKERPEDRPT 257
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 282
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 283 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 309
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 188 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 240 YQLMRL---CWKERPEDRPT 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 194 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 246 YQLMRL---CWKERPEDRPT 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 197 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 247
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 248 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 193 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 244
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 245 YQLMRL---CWKERPEDRPT 261
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 265
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 266 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 265
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 266 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 17 ITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQG 74
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 237 FTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPG 287
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 288 PVYRIMT---QCWQHQPEDRPNFAIILERI 314
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 14 SMKITEKCDVYSFGVLALEVI-KGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
+ K T K DV+SFGVL E++ +G P V++ +V + +L P + P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD---- 323
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ EV C E RP+ + ++
Sbjct: 324 -----PLYEVMLKCWHPKAEMRPSFSELVSRI 350
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 190 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 241
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 242 YQLMRL---CWKERPEDRPT 258
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 237 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 237 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 188 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 240 YQLMRL---CWKERPEDRPT 256
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 233 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 198 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 249
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 250 YQLMRL---CWKERPEDRPT 266
>pdb|2RFQ|A Chain A, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus
Sp. Rha1
pdb|2RFQ|B Chain B, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus
Sp. Rha1
pdb|2RFQ|C Chain C, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus
Sp. Rha1
pdb|2RFQ|D Chain D, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus
Sp. Rha1
Length = 394
Score = 29.3 bits (64), Expect = 0.51, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 21 CDVYSFGVLALEVIKGKHPRDFVSSILP 48
CD S+ VL VIK P DFVS ++P
Sbjct: 145 CDHASWAVLGGPVIKDGRPVDFVSFLIP 172
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 188 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 238
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 239 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 194 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 246 YQLMRL---CWKERPEDRPT 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 185 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 235
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 236 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 188 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 240 YQLMRL---CWKERPEDRPT 256
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 240 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 197 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 248
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 249 YQLMRL---CWKERPEDRPT 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPD-VQGKL 76
T K DV+SFG+L E++ H R +P + N + + L+ + PD +L
Sbjct: 196 TIKSDVWSFGILLTEIV--THGR------IPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 247
Query: 77 ISIMEVAFSCLDASPESRPT 96
+M + C PE RPT
Sbjct: 248 YQLMRL---CWKERPEDRPT 264
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 233 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 230 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 280
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 281 VYRIMT---QCWQHQPEDRPNFAIILERI 306
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 224 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 274
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 275 VYRIMT---QCWQHQPEDRPNFAIILERI 300
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 240 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 17 ITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQG 74
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 237 FTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPG 287
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 288 PVYRIMT---QCWQHQPEDRPNFAIILERI 314
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 215 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 265
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 266 VYRIMT---QCWQHQPEDRPNFAIILERI 291
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 237 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 271 THQSDVWSFGVLLWEIFT-----------LGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 318
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 319 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 347
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 223 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 273
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 274 VYRIMT---QCWQHQPEDRPNFAIILERI 299
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 233 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 240 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 223 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 273
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 274 VYRIMT---QCWQHQPEDRPNFAIILERI 299
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 224 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 274
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 275 VYRIMT---QCWQHQPEDRPNFAIILERI 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 241 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 291
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 292 VYRIMT---QCWQHQPEDRPNFAIILERI 317
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 235 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 250 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 300
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 301 VYRIMT---QCWQHQPEDRPNFAIILERI 326
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 238 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 288
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 289 VYRIMT---QCWQHQPEDRPNFAIILERI 314
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 185 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 235
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 236 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 224 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 274
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 275 VYRIMT---QCWQHQPEDRPNFAIILERI 300
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 240 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 17 ITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQG 74
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 263 FTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPG 313
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 314 PVYRIMT---QCWQHQPEDRPNFAIILERI 340
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 240 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEML--DPRFPPPSPDVQGK 75
T K D +SFGVL E+ F +P S N + E + R PP + G
Sbjct: 240 TSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-NCPGP 290
Query: 76 LISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ IM C PE RP + +++
Sbjct: 291 VYRIMT---QCWQHQPEDRPNFAIILERI 316
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Query: 16 KITEKCDVYSFGVLALEVI---KGKHPRDFVSSILPSSSVINIPLDEMLDPR----FPPP 68
K + K DV+SFG+L E+ + +PR IPL +++ PR +
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPYPR--------------IPLKDVV-PRVEKGYKMD 406
Query: 69 SPDVQGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+PD G ++ +V +C +RPT + +QL
Sbjct: 407 APD--GCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 230 THQSDVWSFGVLLWEIFT-----------LGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 277
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 278 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 306
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 0.79, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 28.9 bits (63), Expect = 0.80, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 4 FLLHFA--ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINI 55
F LH+A EL E CD++S GV+ ++ G+ P L +S + I
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.5 bits (62), Expect = 0.86, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S +P++E+ R PS +
Sbjct: 230 THQSDVWSFGVLLWEIFT-----------LGGSPYPGVPVEELFKLLKEGHRMDKPS-NC 277
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 278 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 306
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.5 bits (62), Expect = 0.90, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 16 KITEKCDVYSFGVLALEVIK-GKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQG 74
K T + DV+SFGV+ E+ GK P +S+ + E+ PR PP
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GRELERPRACPP------ 287
Query: 75 KLISIMEVAFSCLDASPESRPTMQTVTQQLR 105
++ +IM C P+ R +++ V +L+
Sbjct: 288 EVYAIMR---GCWQREPQQRHSIKDVHARLQ 315
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 28.5 bits (62), Expect = 0.91, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 28.5 bits (62), Expect = 0.95, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 237 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 284
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 285 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 19 EKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLIS 78
EK D++ GVL E + G P D S ++N+ D +FPP D LIS
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKDLIS 244
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 19 EKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLIS 78
EK D++ GVL E + G P D S ++N+ D +FPP D LIS
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKDLIS 244
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLD-----PRFPPPSPDV 72
T + DV+SFGVL E+ L S IP++E+ R P+ +
Sbjct: 283 THQSDVWSFGVLMWEIFT-----------LGGSPYPGIPVEELFKLLKEGHRMDKPA-NC 330
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+L +M C A P RPT + + + L
Sbjct: 331 TNELYMMMR---DCWHAVPSQRPTFKQLVEDL 359
>pdb|1CSJ|A Chain A, Crystal Structure Of The Rna-dependent Rna Polymerase Of
Hepatitis C Virus
pdb|1CSJ|B Chain B, Crystal Structure Of The Rna-dependent Rna Polymerase Of
Hepatitis C Virus
Length = 531
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|1GX6|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Utp And
Manganese
Length = 531
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|1GX5|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Gtp And
Manganese
Length = 536
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 19 EKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLIS 78
EK D++ GVL E + G P D S ++N+ D +FPP D LIS
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKDLIS 245
>pdb|1C2P|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
pdb|1C2P|B Chain B, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
Length = 576
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 239 IRVEESIYQCCDLAPEARQAIKSLTERLYI 268
>pdb|2AWZ|A Chain A, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5h)
pdb|2AWZ|B Chain B, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5h)
pdb|2AX0|A Chain A, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5x)
pdb|2AX0|B Chain B, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5x)
pdb|2AX1|A Chain A, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5ee)
pdb|2AX1|B Chain B, Hepatitis C Virus Ns5b Rna Polymerase In Complex With A
Covalent Inhibitor (5ee)
Length = 580
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPDSVAYQHVREDPI------PPS 240
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2GIQ|A Chain A, Hepatitis C Virus Rna-Dependent Rna Polymerase Ns5b With
Nni-2 Inhibitor
pdb|2GIQ|B Chain B, Hepatitis C Virus Rna-Dependent Rna Polymerase Ns5b With
Nni-2 Inhibitor
pdb|2GIR|A Chain A, Hepatitis C Virus Rna-Dependent Rna Polymerase Ns5b With
Nni-1 Inhibitor
pdb|2GIR|B Chain B, Hepatitis C Virus Rna-Dependent Rna Polymerase Ns5b With
Nni-1 Inhibitor
Length = 568
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 239 IRVEESIYQCCDLAPEARQAIKSLTERLYI 268
>pdb|1OS5|A Chain A, Crystal Structure Of Hcv Ns5b Rna Polymerase Complexed
With A Novel Non-Competitive Inhibitor
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3MF5|A Chain A, Hepatitis C Virus Polymerase Ns5b (Bk) With Amide
Bioisostere Thumb Site Inhibitor
pdb|3MF5|B Chain B, Hepatitis C Virus Polymerase Ns5b (Bk) With Amide
Bioisostere Thumb Site Inhibitor
Length = 570
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3HHK|A Chain A, Hcv Ns5b Polymerase Complex With A Substituted
Benzothiadizine
pdb|3HHK|B Chain B, Hcv Ns5b Polymerase Complex With A Substituted
Benzothiadizine
Length = 563
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3FRZ|A Chain A, Crystal Structure Of Hcv Ns5b Rna Polymerase In Complex
With
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|2FVC|A Chain A, Crystal Structure Of Ns5b Bk Strain (Delta 24) In Complex
With A 3-(1,1-Dioxo-2h-(1,2,4)-Benzothiadiazin-3-Yl)-4-
Hydroxy-2(1h)-Quinolinone
pdb|2FVC|B Chain B, Crystal Structure Of Ns5b Bk Strain (Delta 24) In Complex
With A 3-(1,1-Dioxo-2h-(1,2,4)-Benzothiadiazin-3-Yl)-4-
Hydroxy-2(1h)-Quinolinone
Length = 563
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|2BRK|A Chain A, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With An Allosteric Inhibitor (Compound 1)
pdb|2BRL|A Chain A, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With An Allosteric Inhibitor (Compound 2)
pdb|2WHO|A Chain A, Crystal Structure Of Hepatitis C Virus Ns5b Polymerase
From 1b Genotype In Complex With A Non-Nucleoside
Inhibitor
pdb|2WHO|B Chain B, Crystal Structure Of Hepatitis C Virus Ns5b Polymerase
From 1b Genotype In Complex With A Non-Nucleoside
Inhibitor
pdb|2WRM|A Chain A, Identification Of Novel Allosteric Inhibitors Of Hepatitis
C Virus Ns5b Polymerase Thumb Domain (Site Ii) By
Structure-Based Design
Length = 536
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|1QUV|A Chain A, Crystal Structure Of The Rna Directed Rna Polymerase Of
Hepatitis C Virus
pdb|2GC8|A Chain A, Structure Of A Proline Sulfonamide Inhibitor Bound To Hcv
Ns5b Polymerase
pdb|2GC8|B Chain B, Structure Of A Proline Sulfonamide Inhibitor Bound To Hcv
Ns5b Polymerase
pdb|2QE2|A Chain A, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|2QE2|B Chain B, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|2QE5|A Chain A, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|2QE5|B Chain B, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|2QE5|C Chain C, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|2QE5|D Chain D, Structure Of Hcv Ns5b Bound To An Anthranilic Acid
Inhibitor
pdb|3VQS|A Chain A, Crystal Structure Of Hcv Ns5b Rna Polymerase With A Novel
Piperazine Inhibitor
pdb|3VQS|B Chain B, Crystal Structure Of Hcv Ns5b Rna Polymerase With A Novel
Piperazine Inhibitor
pdb|3VQS|C Chain C, Crystal Structure Of Hcv Ns5b Rna Polymerase With A Novel
Piperazine Inhibitor
pdb|3VQS|D Chain D, Crystal Structure Of Hcv Ns5b Rna Polymerase With A Novel
Piperazine Inhibitor
Length = 578
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|2I1R|A Chain A, Novel Thiazolones As Hcv Ns5b Polymerase Inhibitors:
Further Designs, Synthesis, Sar And X-Ray Complex
Structure
pdb|2I1R|B Chain B, Novel Thiazolones As Hcv Ns5b Polymerase Inhibitors:
Further Designs, Synthesis, Sar And X-Ray Complex
Structure
pdb|2HWH|A Chain A, Hcv Ns5b Allosteric Inhibitor Complex
pdb|2HWH|B Chain B, Hcv Ns5b Allosteric Inhibitor Complex
pdb|2HWI|A Chain A, Hcv Ns5b Allosteric Inhibitor Complex
pdb|2HWI|B Chain B, Hcv Ns5b Allosteric Inhibitor Complex
pdb|2IJN|A Chain A, Isothiazoles As Active-Site Inhibitors Of Hcv Ns5b
Polymerase
pdb|2IJN|B Chain B, Isothiazoles As Active-Site Inhibitors Of Hcv Ns5b
Polymerase
pdb|2O5D|A Chain A, Thiazolone-Acylsulfonamides As Novel Hcv Ns5b Polymerase
Allosteric Inhibitors: Convergence Of Structure-Based
Drug Design And X-Ray Crystallographic Study
pdb|2O5D|B Chain B, Thiazolone-Acylsulfonamides As Novel Hcv Ns5b Polymerase
Allosteric Inhibitors: Convergence Of Structure-Based
Drug Design And X-Ray Crystallographic Study
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 239 IRVEESIYQCCDLAPEARQAIKSLTERLYI 268
>pdb|4EO6|A Chain A, Hcv Ns5b Polymerase Inhibitors: Tri-Substituted
Acylhydrazines As Tertiary Amide Bioisosteres
pdb|4EO6|B Chain B, Hcv Ns5b Polymerase Inhibitors: Tri-Substituted
Acylhydrazines As Tertiary Amide Bioisosteres
pdb|4EO8|A Chain A, Hcv Ns5b Polymerase Inhibitors: Tri-Substituted
Acylhydrazines As Tertiary Amide Bioisosteres
pdb|4EO8|B Chain B, Hcv Ns5b Polymerase Inhibitors: Tri-Substituted
Acylhydrazines As Tertiary Amide Bioisosteres
Length = 577
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 240 IRVEESIYQCCDLAPEARQAIKSLTERLYI 269
>pdb|2WCX|A Chain A, Crystal Structure Of Hepatitis C Virus Ns5b Polymerase In
Complex With Thienopyrrole-Based Finger-Loop Inhibitors
pdb|2XWY|A Chain A, Structure Of Mk-3281, A Potent Non-Nucleoside Finger-Loop
Inhibitor, In Complex With The Hepatitis C Virus Ns5b
Polymerase
Length = 537
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 234 IRVEESIYQCCDLAPEARQAIKSLTERLYI 263
>pdb|3CIZ|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Small Molecule Fragments
pdb|3CIZ|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Small Molecule Fragments
pdb|3CJ0|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Small Molecule Fragments
pdb|3CJ0|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Small Molecule Fragments
pdb|3CJ2|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ2|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ3|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ3|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ4|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ4|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ5|A Chain A, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3CJ5|B Chain B, Crystal Structure Of Hepatitis C Virus Rna-Dependent Rna
Polymerase Ns5b In Complex With Optimized Small Molecule
Fragments
pdb|3FQK|A Chain A, Hepatitis C Virus Polymerase Ns5b (Bk 1-570) With Hcv-796
Inhibitor
pdb|3FQK|B Chain B, Hepatitis C Virus Polymerase Ns5b (Bk 1-570) With Hcv-796
Inhibitor
pdb|3G86|A Chain A, Hepatitis C Virus Polymerase Ns5b (Bk 1-570) With Thiazine
Inhibitor
pdb|3G86|B Chain B, Hepatitis C Virus Polymerase Ns5b (Bk 1-570) With Thiazine
Inhibitor
pdb|3H59|A Chain A, Hepatitis C Virus Polymerase Ns5b With Thiazine Inhibitor
2
pdb|3H59|B Chain B, Hepatitis C Virus Polymerase Ns5b With Thiazine Inhibitor
2
pdb|3H5S|A Chain A, Hepatitis C Virus Polymerase Ns5b With Saccharin Inhibitor
pdb|3H5S|B Chain B, Hepatitis C Virus Polymerase Ns5b With Saccharin Inhibitor
pdb|3H5U|A Chain A, Hepatitis C Virus Polymerase Ns5b With Saccharin Inhibitor
1
pdb|3H5U|B Chain B, Hepatitis C Virus Polymerase Ns5b With Saccharin Inhibitor
1
pdb|3H98|A Chain A, Crystal Structure Of Hcv Ns5b 1b With (1,1-Dioxo-2h-[1,2,
4]benzothiadiazin-3-Yl) Azolo[1,5-A]pyrimidine
Derivative
pdb|3H98|B Chain B, Crystal Structure Of Hcv Ns5b 1b With (1,1-Dioxo-2h-[1,2,
4]benzothiadiazin-3-Yl) Azolo[1,5-A]pyrimidine
Derivative
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 239 IRVEESIYQCCDLAPEARQAIKSLTERLYI 268
>pdb|2HAI|A Chain A, Crystal Structure Of Hcv Ns5b Rna Polymerase In Complex
With Novel Class Of Dihydropyrone-Containing Inhibitor
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|1NHU|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Non-
Nucleoside Analogue Inhibitor
pdb|1NHU|B Chain B, Hepatitis C Virus Rna Polymerase In Complex With Non-
Nucleoside Analogue Inhibitor
pdb|1NHV|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Non-
Nucleoside Analogue Inhibitor
pdb|1NHV|B Chain B, Hepatitis C Virus Rna Polymerase In Complex With Non-
Nucleoside Analogue Inhibitor
Length = 578
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 241 IRVEESIYQCCDLAPEARQAIKSLTERLYI 270
>pdb|2ZKU|A Chain A, Structure Of Hepatitis C Virus Ns5b Polymerase In A New
Crystal Form
pdb|2ZKU|B Chain B, Structure Of Hepatitis C Virus Ns5b Polymerase In A New
Crystal Form
pdb|2ZKU|C Chain C, Structure Of Hepatitis C Virus Ns5b Polymerase In A New
Crystal Form
pdb|2ZKU|D Chain D, Structure Of Hepatitis C Virus Ns5b Polymerase In A New
Crystal Form
pdb|3PHE|A Chain A, Hcv Ns5b With A Bound Quinolone Inhibitor
pdb|3PHE|B Chain B, Hcv Ns5b With A Bound Quinolone Inhibitor
pdb|3PHE|C Chain C, Hcv Ns5b With A Bound Quinolone Inhibitor
pdb|3PHE|D Chain D, Hcv Ns5b With A Bound Quinolone Inhibitor
pdb|3UDL|A Chain A, 3-Heterocyclyl Quinolone Bound To Hcv Ns5b
pdb|3UDL|B Chain B, 3-Heterocyclyl Quinolone Bound To Hcv Ns5b
pdb|3UDL|C Chain C, 3-Heterocyclyl Quinolone Bound To Hcv Ns5b
pdb|3UDL|D Chain D, 3-Heterocyclyl Quinolone Bound To Hcv Ns5b
Length = 576
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 239 IRVEESIYQCCDLAPEARQAIKSLTERLYI 268
>pdb|2D3U|A Chain A, X-Ray Crystal Structure Of Hepatitis C Virus Rna Dependent
Rna Polymerase In Complex With Non-Nucleoside Analogue
Inhibitor
pdb|2D3U|B Chain B, X-Ray Crystal Structure Of Hepatitis C Virus Rna Dependent
Rna Polymerase In Complex With Non-Nucleoside Analogue
Inhibitor
pdb|2D3Z|A Chain A, X-Ray Crystal Structure Of Hepatitis C Virus Rna-Dependent
Rna Polymerase In Complex With Non-Nucleoside Analogue
Inhibitor
pdb|2D3Z|B Chain B, X-Ray Crystal Structure Of Hepatitis C Virus Rna-Dependent
Rna Polymerase In Complex With Non-Nucleoside Analogue
Inhibitor
pdb|2D41|A Chain A, X-Ray Crystal Structure Of Hepatitis C Virus Rna-Dependent
Rna Polymerase In Complex With Non-Nucleoside Inhibitor
pdb|2D41|B Chain B, X-Ray Crystal Structure Of Hepatitis C Virus Rna-Dependent
Rna Polymerase In Complex With Non-Nucleoside Inhibitor
Length = 570
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3BR9|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3BR9|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3BSA|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3BSA|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3BSC|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3BSC|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CO9|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CO9|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CDE|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CDE|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CVK|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CVK|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CWJ|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3CWJ|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3D28|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Benzisothiazole Inhibitor
pdb|3D28|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Benzisothiazole Inhibitor
pdb|3D5M|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3D5M|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3E51|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3E51|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Pyridazinone Inhibitor
pdb|3GYN|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Monocyclic Dihydropyridinone Inhibitor
pdb|3GYN|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Monocyclic Dihydropyridinone Inhibitor
pdb|3H2L|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase In Complex With A
Novel Bicyclic Dihydro-Pyridinone Inhibitor
pdb|3H2L|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase In Complex With A
Novel Bicyclic Dihydro-Pyridinone Inhibitor
pdb|3IGV|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Monocyclic Dihydro-Pyridinone Inhibitor
pdb|3IGV|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase With A Novel
Monocyclic Dihydro-Pyridinone Inhibitor
Length = 578
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|2DXS|A Chain A, Crystal Structure Of Hcv Ns5b Rna Polymerase Complexed
With A Tetracyclic Inhibitor
pdb|2DXS|B Chain B, Crystal Structure Of Hcv Ns5b Rna Polymerase Complexed
With A Tetracyclic Inhibitor
Length = 552
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 22 DVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISIME 81
D +SFG E+ G D S L S + + + R P+P K +
Sbjct: 200 DKWSFGTTLWEICSGG---DKPLSALDSQRKL-----QFYEDRHQLPAP----KAAELAN 247
Query: 82 VAFSCLDASPESRPTMQTVTQQLR 105
+ +C+D P+ RP+ + + + L
Sbjct: 248 LINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|2JC0|A Chain A, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With Inhibitor Sb655264
pdb|2JC0|B Chain B, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With Inhibitor Sb655264
pdb|2JC1|A Chain A, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With Inhibitor Sb698223
pdb|2JC1|B Chain B, Crystal Structure Of Hepatitis C Virus Polymerase In
Complex With Inhibitor Sb698223
Length = 570
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIKSLTERLYI 262
>pdb|3FQL|A Chain A, Hepatitis C Virus Polymerase Ns5b (Con1 1-570) With
Hcv-796 Inhibitor
Length = 578
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 241 IRVEESIYQCCDLAPEARQAIRSLTERLYI 270
>pdb|3QGD|A Chain A, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(2,
6-Dimethoxypyrimidin-4-Yl)-1-[(4-Ethylphenyl)sulfonyl]-
N-(4-Methoxybenzyl)piperazine-2-Carboxamide
pdb|3QGD|B Chain B, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(2,
6-Dimethoxypyrimidin-4-Yl)-1-[(4-Ethylphenyl)sulfonyl]-
N-(4-Methoxybenzyl)piperazine-2-Carboxamide
pdb|3QGE|A Chain A, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(2,
6-Dimethoxypyrimidin-4-Yl)-N-(4-Methoxybenzyl)-1-{[4-
(Trifluoromethoxy)phenyl]sulfonyl}piperazine-2-
Carboxamide
pdb|3QGE|B Chain B, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(2,
6-Dimethoxypyrimidin-4-Yl)-N-(4-Methoxybenzyl)-1-{[4-
(Trifluoromethoxy)phenyl]sulfonyl}piperazine-2-
Carboxamide
pdb|3QGF|A Chain A, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(6-Chloropyridazin-3-Yl)-N-(4-Methoxybenzyl)-1-
{[4-
(Trifluoromethoxy)phenyl]sulfonyl}piperazine-2-
Carboxamide
pdb|3QGF|B Chain B, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
(2r)-4-(6-Chloropyridazin-3-Yl)-N-(4-Methoxybenzyl)-1-
{[4-
(Trifluoromethoxy)phenyl]sulfonyl}piperazine-2-
Carboxamide
pdb|3QGG|A Chain A, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
N-Cyclopropyl-6-[(3r)-3-{[4-
(Trifluoromethoxy)benzyl]carbamoyl}-
4-{[4-(Trifluoromethoxy)phenyl]sulfonyl}piperazin-1-
Yl]pyridazine-3- Carboxamide
pdb|3QGG|B Chain B, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid And
N-Cyclopropyl-6-[(3r)-3-{[4-
(Trifluoromethoxy)benzyl]carbamoyl}-
4-{[4-(Trifluoromethoxy)phenyl]sulfonyl}piperazin-1-
Yl]pyridazine-3- Carboxamide
pdb|3Q0Z|A Chain A, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid
pdb|3Q0Z|B Chain B, Crystal Structure Of The Hepatitis C Virus Ns5b
Rna-Dependent Rna Polymerase Complex With
(2e)-3-(4-{[(1-{[(13-Cyclohexyl-6-Oxo-6,7-
Dihydro-5h-Indolo[1,2-D][1,4]benzodiazepin-10-Yl)
Carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-
Enoic Acid
Length = 574
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 234 IRVEESIYQCCDLAPEARQAIRSLTERLYI 263
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 22 DVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISIME 81
D +SFG E+ G D S L S + + + R P+P K +
Sbjct: 200 DKWSFGTTLWEICSGG---DKPLSALDSQRKL-----QFYEDRHQLPAP----KAAELAN 247
Query: 82 VAFSCLDASPESRPTMQTVTQQLR 105
+ +C+D P+ RP+ + + + L
Sbjct: 248 LINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|3UPI|A Chain A, Synthesis Of Novel 4,5-Dihydrofurano Indoles And Their
Evaluation As Hcv Ns5b Polymerase Inhibitors
pdb|3UPI|B Chain B, Synthesis Of Novel 4,5-Dihydrofurano Indoles And Their
Evaluation As Hcv Ns5b Polymerase Inhibitors
Length = 585
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|4DRU|A Chain A, Hcv Ns5b In Complex With Macrocyclic Indole Inhibitor
pdb|4DRU|B Chain B, Hcv Ns5b In Complex With Macrocyclic Indole Inhibitor
Length = 563
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|3LKH|A Chain A, Inhibitors Of Hepatitis C Virus Polymerase: Synthesis And
Characterization Of Novel
6-Fluoro-N-[2-Hydroxy-1(S)-Benzam
pdb|3LKH|B Chain B, Inhibitors Of Hepatitis C Virus Polymerase: Synthesis And
Characterization Of Novel
6-Fluoro-N-[2-Hydroxy-1(S)-Benzam
pdb|3SKA|A Chain A, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3SKA|B Chain B, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3SKE|A Chain A, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3SKE|B Chain B, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3SKH|A Chain A, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3SKH|B Chain B, I. Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of
Indole 2- Carboxylic Acids With C3-Heterocycles
pdb|3UPH|A Chain A, Synthesis Of Novel 4,5-Dihydrofurano Indoles And Their
Evaluation As Hcv Ns5b Polymerase Inhibitors
pdb|3UPH|B Chain B, Synthesis Of Novel 4,5-Dihydrofurano Indoles And Their
Evaluation As Hcv Ns5b Polymerase Inhibitors
pdb|3TYQ|A Chain A, Sar Development And Discovery Of Potent Indole-Based
Inhibitors Of The Hepatitis C Virus Ns5b Polymerase
pdb|3TYQ|B Chain B, Sar Development And Discovery Of Potent Indole-Based
Inhibitors Of The Hepatitis C Virus Ns5b Polymerase
pdb|3TYV|A Chain A, Sar Development And Discovery Of Potent Indole-Based
Inhibitors Of The Hepatitis C Virus Ns5b Polymerase
pdb|3TYV|B Chain B, Sar Development And Discovery Of Potent Indole-Based
Inhibitors Of The Hepatitis C Virus Ns5b Polymerase
Length = 576
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 17/91 (18%)
Query: 18 TEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS----PDVQ 73
T + DV+SFGVL E+ L +S + +DE R + PD
Sbjct: 224 TIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYT 272
Query: 74 GKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
+ + C P RPT + + L
Sbjct: 273 TP--EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1NB4|A Chain A, Hc-J4 Rna Polymerase Apo-Form
pdb|1NB4|B Chain B, Hc-J4 Rna Polymerase Apo-Form
pdb|1NB6|A Chain A, Hc-J4 Rna Polymerase Complexed With Utp
pdb|1NB6|B Chain B, Hc-J4 Rna Polymerase Complexed With Utp
pdb|1NB7|A Chain A, Hc-J4 Rna Polymerase Complexed With Short Rna Template
Strand
pdb|1NB7|B Chain B, Hc-J4 Rna Polymerase Complexed With Short Rna Template
Strand
Length = 570
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|3U4O|A Chain A, Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of Indole
C2 Acyl Sulfonamides
pdb|3U4O|B Chain B, Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of Indole
C2 Acyl Sulfonamides
pdb|3U4R|A Chain A, Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of Indole
C2 Acyl Sulfonamides
pdb|3U4R|B Chain B, Novel Hcv Ns5b Polymerase Inhibitors: Discovery Of Indole
C2 Acyl Sulfonamides
Length = 578
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|2XHV|A Chain A, Hcv-J4 Ns5b Polymerase Point Mutant Orthorhombic Crystal
Form
pdb|2XHV|B Chain B, Hcv-J4 Ns5b Polymerase Point Mutant Orthorhombic Crystal
Form
Length = 579
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 234 IRVEESIYQCCDLAPEARQAIRSLTERLYI 263
>pdb|3MWV|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase
pdb|3MWV|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase
pdb|3MWW|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase
pdb|3MWW|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase
pdb|4GMC|A Chain A, Crystal Structure Of Hcv Ns5b Polymerase In Complex With A
Thumb Inhibitor
pdb|4GMC|B Chain B, Crystal Structure Of Hcv Ns5b Polymerase In Complex With A
Thumb Inhibitor
Length = 576
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 233 IRVEESIYQCCDLAPEARQAIRSLTERLYI 262
>pdb|2XHU|A Chain A, Hcv-J4 Ns5b Polymerase Orthorhombic Crystal Form
pdb|2XHU|B Chain B, Hcv-J4 Ns5b Polymerase Orthorhombic Crystal Form
pdb|2XHW|A Chain A, Hcv-J4 Ns5b Polymerase Trigonal Crystal Form
Length = 579
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 234 IRVEESIYQCCDLAPEARQAIRSLTERLYI 263
>pdb|3CSO|A Chain A, Hcv Polymerase In Complex With A 1,5 Benzodiazepine
Inhibitor
pdb|3CSO|B Chain B, Hcv Polymerase In Complex With A 1,5 Benzodiazepine
Inhibitor
pdb|3GOL|A Chain A, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor (R)- 11d
pdb|3GOL|B Chain B, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor (R)- 11d
pdb|3GNV|A Chain A, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor 1b
pdb|3GNV|B Chain B, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor 1b
pdb|3GNW|A Chain A, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor 4c
pdb|3GNW|B Chain B, Hcv Ns5b Polymerase In Complex With 1,5 Benzodiazepine
Inhibitor 4c
pdb|3HKY|A Chain A, Hcv Ns5b Polymerase Genotype 1b In Complex With 1,5
Benzodiazepine 6
pdb|3HKY|B Chain B, Hcv Ns5b Polymerase Genotype 1b In Complex With 1,5
Benzodiazepine 6
Length = 581
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L I
Sbjct: 236 IRVEESIYQCCDLAPEARQAIRSLTERLYI 265
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 20 KCDVYSFGVLALEVIKGKHP 39
K D++S G++A+E+I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 20 KCDVYSFGVLALEVIKGKHP 39
K D++S G++A+E+I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 20 KCDVYSFGVLALEVIKGKHP 39
K D++S G++A+E+I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 20 KCDVYSFGVLALEVIKGKHP 39
K D++S G++A+E+I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 20 KCDVYSFGVLALEVIKGKHP 39
K D++S G++A+E+I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVREDPI------PPS 240
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVREDPI------PPS 240
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 206 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVREDPI------PPS 257
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 258 ARHEGLSADLDAVVLKALAKNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVREDPI------PPS 240
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 10 ELAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPS 69
E A + + DVYS G + EV+ G+ P F S + ++ D + PPS
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPVSVAYQHVREDPI------PPS 240
Query: 70 PDVQGKLISIMEVAFSCLDASPESR 94
+G + V L +PE+R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 391 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 441
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 442 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 430 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 480
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 481 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 11 LAYSMKITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSP 70
LAY+ K + K DV++FGVL E+ + P + + E+L+ + P
Sbjct: 388 LAYN-KFSIKSDVWAFGVLLWEIA--------TYGMSPYPGIDLSQVYELLEKDYRMERP 438
Query: 71 DVQGKLISIMEVAFSCLDASPESRPTMQTVTQ 102
+G + E+ +C +P RP+ + Q
Sbjct: 439 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1YVF|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
Complex With Inhibitor Pha-00729145
pdb|1Z4U|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
Complex With Inhibitor Pha-00799585
Length = 577
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 20/30 (66%)
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQLRI 106
I + E + C D +PE+R ++++T++L +
Sbjct: 234 IRVEESIYQCCDLAPEARQAIRSLTERLYV 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 16 KITEKCDVYSFGVLALEVIK-GK--HPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
K + K DV+SFG+L E+ G+ +PR + ++P ++ + +PD
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----------VEKGYKMDAPD- 222
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
G ++ EV +C RP+ + +QL
Sbjct: 223 -GCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 253
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 16 KITEKCDVYSFGVLALEVIK-GK--HPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDV 72
K + K DV+SFG+L E+ G+ +PR + ++P ++ + +PD
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----------VEKGYKMDAPD- 237
Query: 73 QGKLISIMEVAFSCLDASPESRPTMQTVTQQL 104
G ++ EV +C RP+ + +QL
Sbjct: 238 -GCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 16 KITEKCDVYSFGVLALEVIKGKHP 39
K EKCDV+S GV+ ++ G P
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3V10|A Chain A, Crystal Structure Of The Collagen Binding Domain Of
Erysipelothrix Rhusiopathiae Surface Protein Rspb
pdb|3V10|B Chain B, Crystal Structure Of The Collagen Binding Domain Of
Erysipelothrix Rhusiopathiae Surface Protein Rspb
Length = 321
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 39 PRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISIMEVAFS 85
P DF LPS+ +++ + + P + D GK I++ E+ F+
Sbjct: 47 PGDFFDLTLPSNDEVSLRSLRAMGSKMPVLAKDKNGKEITLGELTFN 93
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISI 79
K DV+S G+ +E+ + K P + ++ S++ +I +E SP +Q S
Sbjct: 194 KVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE---------SPALQSGHWSE 241
Query: 80 MEVAF--SCLDASPESRPTMQTVTQQ 103
F SCL P+ RPT + + +
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKH 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 20 KCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKLISI 79
K DV+S G+ +E+ + K P + ++ S++ +I +E SP +Q S
Sbjct: 233 KVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE---------SPALQSGHWSE 280
Query: 80 MEVAF--SCLDASPESRPTMQTVTQQ 103
F SCL P+ RPT + + +
Sbjct: 281 YFRNFVDSCLQKIPQDRPTSEVLLKH 306
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 17 ITEKCDVYSFGVLALEVIKGKHPRDFVSSILPSSSVINIPLDEMLDPRFPPPSPDVQGKL 76
I E+ DV+S G + ++ G+ P D V SV +++ P+ P S + L
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMV--FQKGDSVALAVQNQLSIPQSPRHSSALWQLL 280
Query: 77 ISIMEVAFSCLDASPESRPTMQTVTQQL 104
S+M V P RP + + QL
Sbjct: 281 NSMMTV-------DPHQRPHIPLLLSQL 301
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 13 YSMKITEKCDVYSFGVLALEVIKGKHP 39
Y K E DVY+FG LE ++P
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSEYP 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,881,829
Number of Sequences: 62578
Number of extensions: 98903
Number of successful extensions: 619
Number of sequences better than 100.0: 229
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 523
Number of HSP's gapped (non-prelim): 229
length of query: 106
length of database: 14,973,337
effective HSP length: 71
effective length of query: 35
effective length of database: 10,530,299
effective search space: 368560465
effective search space used: 368560465
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)