Your job contains 1 sequence.
>038509
MSNLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYDPSGEGPVIISVPFPFVQGKPQSI
LVGETSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDPQKDQGFLEGF
SIEDRVLQPLRTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDSVSRSLASNR
PYSRVPRKMQSAVDEYVASSSPARTTTEARTTKRGSNYKLPEFPIPNDVRESLANKILPQ
FLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRP
SLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRIN
MRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPP
YVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENE
ILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKR
GNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSY
LERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVD
IFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPY
RQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSN
PRRFNVAITRARSLLIIVGNPHIVCQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038509
(806 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 2620 1.7e-272 1
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 891 1.4e-112 2
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 885 7.9e-112 2
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 867 9.0e-111 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 871 3.0e-110 2
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 902 2.4e-108 2
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 871 1.7e-107 2
ZFIN|ZDB-GENE-060526-371 - symbol:mov10b.2 "Moloney leuke... 1058 5.7e-107 1
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 1043 2.2e-105 1
UNIPROTKB|Q5ZKD7 - symbol:MOV10 "Putative helicase MOV-10... 782 3.4e-97 2
UNIPROTKB|Q0V8H6 - symbol:MOV10 "Putative helicase MOV-10... 893 3.4e-92 2
MGI|MGI:97054 - symbol:Mov10 "Moloney leukemia virus 10" ... 883 1.5e-91 2
RGD|1598327 - symbol:Mov10 "Moloney leukemia virus 10" sp... 881 4.9e-91 2
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 870 4.7e-87 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 843 3.4e-84 1
UNIPROTKB|F1NNW1 - symbol:MOV10 "Putative helicase MOV-10... 787 3.0e-78 1
UNIPROTKB|F1SBP9 - symbol:MOV10 "Uncharacterized protein"... 782 1.0e-77 1
UNIPROTKB|F1P7T4 - symbol:MOV10 "Uncharacterized protein"... 779 2.1e-77 1
UNIPROTKB|J9P7Z9 - symbol:MOV10 "Uncharacterized protein"... 779 2.1e-77 1
UNIPROTKB|Q9HCE1 - symbol:MOV10 "Putative helicase MOV-10... 763 1.0e-75 1
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 589 4.8e-57 2
RGD|1307049 - symbol:Helz "helicase with zinc finger" spe... 573 6.1e-54 3
UNIPROTKB|I6L9H4 - symbol:HELZ "Probable helicase with zi... 561 6.2e-54 3
UNIPROTKB|J3QS41 - symbol:HELZ "Probable helicase with zi... 561 1.5e-52 3
UNIPROTKB|E2R8C1 - symbol:HELZ "Uncharacterized protein" ... 560 2.7e-52 3
UNIPROTKB|F1NPN9 - symbol:LOC100857488 "Uncharacterized p... 557 5.0e-52 3
UNIPROTKB|F1RSM3 - symbol:HELZ "Uncharacterized protein" ... 558 5.9e-52 3
MGI|MGI:1925705 - symbol:Helz "helicase with zinc finger ... 553 2.3e-51 2
UNIPROTKB|P42694 - symbol:HELZ "Probable helicase with zi... 551 5.7e-51 3
ZFIN|ZDB-GENE-040426-2419 - symbol:helz "helicase with zi... 552 3.3e-49 2
FB|FBgn0036451 - symbol:CG9425 species:7227 "Drosophila m... 536 2.2e-47 2
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 386 8.1e-46 2
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 498 6.3e-45 1
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 455 3.3e-39 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 297 4.4e-38 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 442 2.9e-37 2
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 428 8.9e-37 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 428 8.9e-37 1
UNIPROTKB|F1MKC7 - symbol:Bt.110099 "Uncharacterized prot... 431 2.7e-36 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 422 3.2e-36 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 422 7.8e-36 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 426 2.9e-35 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 426 4.3e-35 2
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 343 6.0e-35 3
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 419 1.4e-34 3
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 322 1.5e-34 2
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 412 4.0e-34 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 412 4.2e-34 2
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 412 4.2e-34 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 412 4.2e-34 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 412 4.2e-34 2
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 411 5.3e-34 2
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 352 8.2e-34 2
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 409 1.7e-33 2
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 408 9.5e-33 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 309 5.2e-32 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 386 5.3e-32 1
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 402 2.6e-31 2
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 344 7.1e-31 2
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 261 1.5e-30 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 263 4.0e-30 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 263 4.0e-30 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 263 1.7e-29 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 324 1.8e-29 3
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 259 1.8e-29 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 317 2.1e-29 3
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 258 2.3e-29 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 258 4.8e-29 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 258 5.1e-29 2
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 275 8.0e-29 2
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 268 8.8e-29 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 361 3.7e-28 2
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 247 4.7e-28 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 344 1.3e-27 1
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 309 1.6e-27 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 368 5.6e-27 4
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 365 5.7e-27 3
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 318 7.6e-27 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 276 8.4e-27 3
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 309 1.1e-26 2
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 303 5.2e-26 3
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 308 7.4e-26 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 305 7.5e-26 3
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 339 8.2e-26 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 307 9.4e-26 3
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 316 1.4e-25 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 308 2.3e-25 2
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 341 2.6e-25 2
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 341 2.9e-25 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 341 2.9e-25 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 274 5.0e-25 3
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 288 5.0e-25 2
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 237 5.2e-25 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 237 5.2e-25 2
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 298 9.2e-25 3
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 311 3.2e-24 3
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 284 3.5e-24 2
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 313 5.8e-24 3
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 328 2.7e-23 2
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 282 5.4e-23 2
WARNING: Descriptions of 70 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 2620 (927.3 bits), Expect = 1.7e-272, P = 1.7e-272
Identities = 501/802 (62%), Positives = 630/802 (78%)
Query: 10 DDECSVTGEKREIGFIDFQDDHSVLSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCS 69
DDE SV +K EIGFID+Q+D S Y+P EGPV++SVPFPF + KPQS+ VGETS S
Sbjct: 9 DDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGETSFDS 68
Query: 70 ITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDRVLQP 129
T++NT EPV++W +IY S P +S TLS+++PPS D ++ Q F E F++EDR+L+P
Sbjct: 69 FTVKNTMDEPVDLW-TKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDRMLEP 127
Query: 130 LRTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDSVSRSLASNRPYSRVPR-- 187
TLTIW+SCKPK++GLH +VV D G DR ER+V LLAED +S SL SNRPYSR R
Sbjct: 128 GDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRSRRAP 187
Query: 188 KMQSAVDEYVXXXXXXXXXXXXXXXXXGSNYKLPEFPIPNDVRESLANKILPQFLVEGLV 247
K AVD+YV +LP + IP ++RE + NK P L EGL
Sbjct: 188 KKDFAVDDYVKGSRPSKVVERSFRN------RLPLYEIPKEIREMIENKEFPDDLNEGLT 241
Query: 248 RKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRPSLVHGDF 307
+NY +++ TLL+MEEL+LEEDMR + ME V+M+R+G +L +L+VPGLAERRPSLVHGDF
Sbjct: 242 ARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGIYL-SLEVPGLAERRPSLVHGDF 300
Query: 308 VFVKLAAANAD--AKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMY 365
+FV+ A + A +G ++RVEADEV +KFA EFH +H GS+YNV FTYNRIN RR+Y
Sbjct: 301 IFVRHAYDDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLY 360
Query: 366 QAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFN-SLNEEQTRSVEIILGCKGAPPYVIY 424
QAV AAE L+PN LFPS + +R IK PFVP + +LN EQ S+E++LGCKGAPPYVI+
Sbjct: 361 QAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIH 420
Query: 425 GPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRL 484
GPPGTGKTMTLVEAI+Q+Y+T+ ++R+LVCA SNSAADH+LE+L+ E IK+NEI RL
Sbjct: 421 GPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRL 480
Query: 485 NATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFS 544
NA +R YE++ + IRFCFF+E IFKCPP +AL RY++++STYMS+SLLN G+ RG+F+
Sbjct: 481 NAATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFT 540
Query: 545 HIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERL 604
HI LDEAGQASEPE+MI ++NLC +TVVVLAGDP+QLGPVIYS+DAE+ GLGKSYLERL
Sbjct: 541 HILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERL 600
Query: 605 FECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPN 664
FEC++Y GDE YVTKLV+NYRCHP ILDLPSKLFY GEL+A K+D S+ A ++ PN
Sbjct: 601 FECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVL-ASLNFLPN 659
Query: 665 KDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQV 724
K+FP++F+GIQGCDEREGNNPSWFNR E+SKV++ I +L N + E DIGVITPYRQQV
Sbjct: 660 KEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQV 719
Query: 725 LKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRF 784
+KIK+VL+ DM +VKVG+VEQFQGQE++VII+STVRST+KHNEFDR YCLGFLSNPRRF
Sbjct: 720 MKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRF 779
Query: 785 NVAITRARSLLIIVGNPHIVCQ 806
NVAITRA SLL+I+GNPHI+C+
Sbjct: 780 NVAITRAISLLVIIGNPHIICK 801
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 891 (318.7 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 202/429 (47%), Positives = 278/429 (64%)
Query: 391 KAAPFVPFNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVYSTREH 448
KA FN LNE Q +V+ IL P PY+++GPPGTGKT+T++EA+LQV+
Sbjct: 734 KARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPD 793
Query: 449 SRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR-FCFFEES 507
SRILVCA SNSAAD + RL ++V ++ ++R+NAT R +E++ D ++ +C E
Sbjct: 794 SRILVCAPSNSAADLVCLRLHESKV--LQPATMVRVNATCR-FEEIVIDAVKPYCRDGED 850
Query: 508 IFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLC 567
I+K R+RIII+T SS L G++ G+F+H+F+DEAGQASEPE +IP+ +
Sbjct: 851 IWKA------SRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMS 904
Query: 568 TKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY---------- 617
+VLAGDP QLGPVI S+ A +GL S+LERL Y+ + +
Sbjct: 905 DISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLL 964
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGC 677
VTKLV+NYR H A+L LPS+LFY EL C D S + P K FP++F G++G
Sbjct: 965 VTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRGS 1024
Query: 678 DEREGNNPSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWD 735
+ REG +PSWFN E +V+ L + ++++ +DIGVITPYR+QV KI+ +L D
Sbjct: 1025 EAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVD 1084
Query: 736 MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLL 795
+ D+KVG+VE+FQGQE VII+STVRS E DR Y LGFLSN +RFNVAITR ++LL
Sbjct: 1085 LMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALL 1143
Query: 796 IIVGNPHIV 804
I++GNPH++
Sbjct: 1144 IVLGNPHVL 1152
Score = 240 (89.5 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 64/170 (37%), Positives = 93/170 (54%)
Query: 220 LPEFPIPNDVRESLANKI----LPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSM 275
LP++PIP+ +R+ + KI L E L NY FSTLL +EE+ E +++ ++M
Sbjct: 495 LPQYPIPDRLRKCVEQKIDILTFQPLLAELLNMSNYKEKFSTLLWLEEIYAEMELKEYNM 554
Query: 276 ECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKKGSIY--RVEADEVI 333
+ +RR G LL L+VPGLAE RPSL GD + +K N A + Y + ++V
Sbjct: 555 SGIILRRNG-DLLVLEVPGLAEGRPSLYAGDKLILKTQEYNGHAIEYISYVTEIHEEDVT 613
Query: 334 LKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQ 383
LK EF Q N +V FTYNR RR + A++ +L +LFP +
Sbjct: 614 LKINPEFE-QAYNFEPMDVEFTYNRTTSRRCHFALEHVIHLGVKVLFPEE 662
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 885 (316.6 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 200/422 (47%), Positives = 272/422 (64%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCA 455
FN LNE Q +V IL P PYV++GPPGTGKT+T++EAILQV+ SRILVCA
Sbjct: 744 FNPMLNENQKLAVRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALPDSRILVCA 803
Query: 456 ASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR-FCFFEESIFKCPPR 514
SNSAAD + RL +E ++ ++R+NAT R +E+ T+ IR +C E ++K
Sbjct: 804 PSNSAADLVCLRL--HESRALRPGTMVRVNATCR-FEETITEAIRPYCRDGEDVWKA--- 857
Query: 515 EALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVV 574
R+R++I+T S+ L G++ G+F+H+F+DEAGQASEPE +IP+ + +V
Sbjct: 858 ---SRFRVLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIV 914
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY----------VTKLVRN 624
LAGDP QLGPVI S+ A +GL S LERL Y ++ + VTKLV+N
Sbjct: 915 LAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVKN 974
Query: 625 YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNN 684
YR H A+L LPS+LFY EL C D S + P K FP++F G++G + REG +
Sbjct: 975 YRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEKLPRKGFPLIFHGVRGNEAREGRS 1034
Query: 685 PSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
PSWFN E +V+ L + ++++ DIGVITPYR+QV KIK +L D+ D+KVG
Sbjct: 1035 PSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQVEKIKILLRNVDLMDIKVG 1094
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPH 802
+VE+FQGQE V+I+STVRS E DR Y LGFLSN +RFNVAITR ++LLI++GNPH
Sbjct: 1095 SVEEFQGQEYLVVIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPH 1153
Query: 803 IV 804
++
Sbjct: 1154 VL 1155
Score = 239 (89.2 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 63/171 (36%), Positives = 94/171 (54%)
Query: 220 LPEFPIPNDVRESLANKI----LPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSM 275
LP++PIP+ +++ + KI L E L NY FSTLL +EE+ E +++ ++M
Sbjct: 498 LPQYPIPDRLKKCVEQKIDILTFQPLLAELLNMSNYKEKFSTLLWLEEIHAEIELKEYNM 557
Query: 276 ECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKK--GSIYRVEADEVI 333
VT++R G LL L+VPGLAE RPSL GD + +K N + G + + ++V
Sbjct: 558 SGVTLKRNG-DLLVLEVPGLAESRPSLYAGDKLILKTQEYNGHVIEYIGYVVEIHEEDVT 616
Query: 334 LKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENL-EPNLLFPSQ 383
LK EF Q N +V FTYNR RR + A++ +L +LFP +
Sbjct: 617 LKLNPEFE-QAYNFEPMDVEFTYNRTTSRRCHFALEQVIHLGAKEVLFPEE 666
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 867 (310.3 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 200/422 (47%), Positives = 269/422 (63%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCA 455
FN LNE Q +V IL P PY+++GPPGTGKT+T++EA+LQV+ SRILVCA
Sbjct: 743 FNPVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCA 802
Query: 456 ASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR-FCFFEESIFKCPPR 514
SNSAAD + RL ++V K ++R+NAT R +E+ D I+ +C E I++
Sbjct: 803 PSNSAADLVCLRLHESKVP--KPAAMVRVNATCR-FEETIIDAIKPYCRDGEDIWRA--- 856
Query: 515 EALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVV 574
R+RIII+T S+ L G++ G F+H+F+DEAGQASEPE +IP+ + +V
Sbjct: 857 ---SRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIV 913
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY----------VTKLVRN 624
LAGDP QLGPVI S+ A +GL S LERL Y + + VTKLV+N
Sbjct: 914 LAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKN 973
Query: 625 YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNN 684
YR H A+L LPS+LFY EL C D S + P K FP++F G++G + REG +
Sbjct: 974 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFHGVRGNEAREGRS 1033
Query: 685 PSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
PSWF+ E +V+ L + ++++ DIGVITPYR+QV KIK +L D+ D+KVG
Sbjct: 1034 PSWFSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVG 1093
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPH 802
+VE+FQGQE VI++STVRS E DR Y LGFLSN +RFNVAITR ++LLII+GNPH
Sbjct: 1094 SVEEFQGQEYLVIVISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIILGNPH 1152
Query: 803 IV 804
++
Sbjct: 1153 VL 1154
Score = 247 (92.0 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 76/265 (28%), Positives = 123/265 (46%)
Query: 126 VLQPLRTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDSVSRSLASNRPYS-R 184
++ P I ++C K G K ++ D R + + S +A P+S +
Sbjct: 344 LIPPGEKTHIVVTCSAKNPGRCKELLLLCFSDFLIGRHLEVSVVSSEEALIAVREPFSWK 403
Query: 185 VPRKMQSAVDEYVXXXXXXXXXXXXXXXXXGSNYKLPEFPIPNDVRESLANKI----LPQ 240
P+ Q+ V ++ LP++PIP+ +++ + KI
Sbjct: 404 KPKSSQTLVSAKTTVVVTTQKRNSRRQL---PSF-LPQYPIPDRLKKCVEQKIDILTFQP 459
Query: 241 FLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRP 300
L E L NY FSTLL +EE+ E +++ ++M V ++RKG LL L+VPGLAE RP
Sbjct: 460 LLAELLNMSNYKEKFSTLLWLEEIHAEIELKEYNMSRVVLKRKG-DLLVLEVPGLAESRP 518
Query: 301 SLVHGDFVFVKLAAANADAKK--GSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNR 358
SL GD + +K N + G + + ++V LK F + N +V FTYNR
Sbjct: 519 SLYAGDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLKLNPGFEQMY-NFEPMDVEFTYNR 577
Query: 359 INMRRMYQAVQAAENLEPNLLFPSQ 383
RR + A++ +L +LFP +
Sbjct: 578 TTSRRCHYALEQVIHLGVKVLFPEE 602
Score = 41 (19.5 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 13 CSVT--GEKREIGFIDFQD----DHSVLSYDPSGEGPVIISVPFPFVQGKPQSILVGETS 66
CS G +E+ + F D H +S S E + + PF + + K LV +
Sbjct: 357 CSAKNPGRCKELLLLCFSDFLIGRHLEVSVVSSEEALIAVREPFSWKKPKSSQTLVSAKT 416
Query: 67 KCSITIQ 73
+T Q
Sbjct: 417 TVVVTTQ 423
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 871 (311.7 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 197/422 (46%), Positives = 272/422 (64%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCA 455
FN LNE Q +V+ IL P PYV++GPPGTGKT+T++EA+LQV+ SRILVCA
Sbjct: 739 FNPMLNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVFHALPDSRILVCA 798
Query: 456 ASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR-FCFFEESIFKCPPR 514
SNSAAD + RL +E G++ ++R+NAT R +E+ D I+ +C E +++
Sbjct: 799 PSNSAADLVCLRL--HESRGLRPGAMVRVNATCR-FEETILDAIKPYCRDGEDVWRA--- 852
Query: 515 EALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVV 574
R+R++I+T S+ L G++ G+F+H+F+DEAGQASEPE +IP+ + ++
Sbjct: 853 ---SRFRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDGQII 909
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY----------VTKLVRN 624
LAGDP QLGPVI S+ A +GL S LERL Y ++ + VTKLV+N
Sbjct: 910 LAGDPMQLGPVIKSRLAMAYGLNVSMLERLMARPAYLRDEDAFGACGAYNPLLVTKLVKN 969
Query: 625 YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNN 684
YR H A+L LPS+LFY EL C D S + P K FP++F G++G + REG +
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLVFHGVRGTEAREGRS 1029
Query: 685 PSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
PSWFN E +V+ L + ++++ DIGVITPYR+QV KIK +L + +VKVG
Sbjct: 1030 PSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILLRNVGLAEVKVG 1089
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPH 802
+VE+FQGQE VII+STVRS E DR Y LGFLSN +RFNVAITR ++LLI++GNPH
Sbjct: 1090 SVEEFQGQEYLVIIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPH 1148
Query: 803 IV 804
++
Sbjct: 1149 VL 1150
Score = 238 (88.8 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 61/170 (35%), Positives = 92/170 (54%)
Query: 220 LPEFPIPNDVRESLANKI----LPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSM 275
LP++P P+ +++ + K+ L E L NY FSTLL +EE+ E ++R ++M
Sbjct: 496 LPQYPTPDRLKKCVEQKMDILTFQPLLAELLNMSNYKEKFSTLLWLEEIHAEMELREYNM 555
Query: 276 ECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKK--GSIYRVEADEVI 333
VT++R G LL L+VPGLAE RPSL GD + +K + + G + + + V
Sbjct: 556 SGVTLKRNGG-LLVLEVPGLAESRPSLYAGDKLILKTPEYDGHVIEYIGYVVEIREENVT 614
Query: 334 LKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQ 383
LK EF Q N +V FTYNR RR + A++ +L +LFP +
Sbjct: 615 LKLNPEFE-QTYNFEPMDVEFTYNRTTSRRCHFALEQVVHLGAKVLFPEE 663
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 902 (322.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 204/437 (46%), Positives = 283/437 (64%)
Query: 383 QSTKRRSIKAAPFVPFNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAIL 440
+ T+ +A F FN LN++Q +V+ IL + P PY+++GPPGTGKT+T+VEAIL
Sbjct: 735 EETETIKWRAGEF--FNPMLNKQQKLAVKRILSGECRPTPYILFGPPGTGKTITVVEAIL 792
Query: 441 QVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR 500
Q++ T SRILVCA SN+A D + RL + + +K ++R+NAT R E + D ++
Sbjct: 793 QIHFTLPDSRILVCAPSNAATDLICLRLHQSNL--LKPGAMVRVNATCRSTEQID-DIVK 849
Query: 501 -FCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPES 559
+C + I+K A+ +RIII+T S+ + G + G+F+H+ LDEAGQASEPES
Sbjct: 850 PYCKDGDDIWK-----AVW-FRIIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPES 903
Query: 560 MIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY-- 617
+IPI + +VL GDPKQLGP+I S+ A FGL S LERL + Y ++ +
Sbjct: 904 LIPIGLISEVNGQIVLVGDPKQLGPLIKSRIAVAFGLNISLLERLISRDMYLRDEDAFSA 963
Query: 618 --------VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPV 669
+TKLV NYR H A+L LPSKLFY EL C D + S + P K FP+
Sbjct: 964 DGSYNPLLITKLVNNYRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPL 1023
Query: 670 LFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTEL--NETDIGVITPYRQQVLKI 727
+F G++G + REG++PSWFN E +V+ L +N + + TDIGVITPYR+QV KI
Sbjct: 1024 IFHGVRGKETREGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKI 1083
Query: 728 KKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVA 787
K +L + D+ D+KVGTVE+FQGQE V I+STVRS + + YCLGFLSNP+RFNVA
Sbjct: 1084 KFLLRSIDLSDIKVGTVEEFQGQECMVTILSTVRS-YEDTFAEEEYCLGFLSNPKRFNVA 1142
Query: 788 ITRARSLLIIVGNPHIV 804
ITRA++LLI++GNPH++
Sbjct: 1143 ITRAKALLIVIGNPHLL 1159
Score = 189 (71.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 60/173 (34%), Positives = 91/173 (52%)
Query: 220 LPEFPIPNDVRESLANKI-LPQF---LVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSM 275
LP + IPN++R + K+ + F L L +NY + FSTLL +EE+ E +++ M
Sbjct: 431 LPHYTIPNELRRCVEQKLDILSFQPLLAAHLNLENYEAKFSTLLWLEEIYQEMEIKKFDM 490
Query: 276 ECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKKGSIYRVEA--DEVI 333
VT++R G +LL L+VPG+ E RP L GD V +K + + Y E ++V
Sbjct: 491 CGVTLKRNG-NLLVLEVPGVEEGRPHLAAGDKVILKSQVYSEHIIEYIAYVTEICNEDVT 549
Query: 334 LKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENL---EPNLLFPSQ 383
LK +F + N +V F + RI RR AV+ A+ L E +LFP +
Sbjct: 550 LKCNADFERAY-NSEPMDVEFVHCRIPSRRCQLAVEQAKCLGEKELEVLFPEK 601
Score = 38 (18.4 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 390 IKAAPFVPFNSLNEEQTRSVEIILGCKGAPP 420
++ + F ++ + ++RS+ I + KG+ P
Sbjct: 219 LEVSKLTDFGTMKQRESRSMIIWIENKGSVP 249
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 871 (311.7 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
Identities = 196/428 (45%), Positives = 272/428 (63%)
Query: 385 TKRRSIKAAPFVPFN-SLNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQV 442
T++R F FN LN Q ++V IL + P PYV++GPPGTGKT+TL+EAILQV
Sbjct: 658 TEKRIPNPGQF--FNPDLNAAQKQAVRRILSGESRPTPYVLFGPPGTGKTITLIEAILQV 715
Query: 443 YSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFC 502
+ SR+LVC SNSAAD + RL + + + R+NAT RP E + + ++
Sbjct: 716 HHRISCSRVLVCTPSNSAADLICMRL--HHSGFLHSASLARVNATCRPEESMSEELRQYA 773
Query: 503 FFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIP 562
E I R A +RI++ST S+ + G++ G+F+H+F+DEAGQA+EPE++IP
Sbjct: 774 RAGEDI-----RHA-SFHRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIP 827
Query: 563 IANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY----V 618
++ L +VLAGDPKQLGPV+ S+ A FGLG S LERL Y G+ G+ V
Sbjct: 828 LSLLSETSGQIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLV 887
Query: 619 TKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCD 678
TKL+ NYR H A+LDLPS+LFY GEL A S + P + FP++F G++G +
Sbjct: 888 TKLLYNYRSHEALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRGSE 947
Query: 679 EREGNNPSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWDM 736
REG NPSWFN E +V+ +L + ++ DIGVI PYR+QV KI+ +L+ +
Sbjct: 948 MREGCNPSWFNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLLQRVGL 1007
Query: 737 PDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLI 796
+VKVG+VE+FQGQE ++I+STVRS + LGFLSNP+RFNVAITRA++LLI
Sbjct: 1008 GEVKVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLI 1067
Query: 797 IVGNPHIV 804
++GNPH++
Sbjct: 1068 VIGNPHVL 1075
Score = 212 (79.7 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
Identities = 92/339 (27%), Positives = 151/339 (44%)
Query: 54 QGKPQSILVGETSKCSITIQNTTPEPVEVWGIRIYCS--EPANSLTL-SLMEPPSGKPDP 110
Q + +L+G+ S+ I +QN E ++ R C+ + A ++ S+ G +
Sbjct: 277 QNQSVCLLMGDCSELLIWVQNCGSERQQLQ--RCVCAGWDSAQQFSVRSVSRCEDGGTEA 334
Query: 111 QKDQGFLEGFSIEDRVLQPLRTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAED 170
+ LE E + P + + + + C K +G ++ R L L+
Sbjct: 335 PPVR-MLE----EPLDIHPGQKMCVCVCCTAKTLGRSSELLLLHFSSFTIGRR-LELSVS 388
Query: 171 SVSRSLAS-NRPYSRVPRKMQSAVDEYVXXXXXXXXXXXXXXXXXGSNYKLPEFPIPNDV 229
SV L + + PY Q V N+ L + +P +
Sbjct: 389 SVEEQLLNPSMPYCSPSAPAQLPQPLQVLTVSAPPTPLRLTRRHL-PNF-LGNYGVPQAL 446
Query: 230 RESL-ANK---ILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGA 285
RE + A K ++ L E L + FS LL +EEL+ E ++R S+ +RR GA
Sbjct: 447 RECVEAQKDVLVVQPALAEALSLRTMLPRFSALLWLEELQAEREIREFSLTGAILRR-GA 505
Query: 286 HLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKKGSIYRVE-ADE-VILKFAKEFHTQ 343
L L+VPGLAE RPSL GD V +K + + Y E +DE V L+ EF +
Sbjct: 506 VYLHLEVPGLAEGRPSLFIGDKVVLKKPCSGGVVIEYIAYVTEISDEDVSLRVNAEFQSS 565
Query: 344 HRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPS 382
+ G +V F++NR+ MRR + A++ +++ N+LFPS
Sbjct: 566 YL-GEPLDVEFSFNRLTMRRCHCALEQSKHFGENILFPS 603
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 247/600 (41%), Positives = 365/600 (60%)
Query: 236 KILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRR-KGAHLLALDVPG 294
K L L L NY F LL +EE ++ D++ ++ + VT+ R + L+ L++PG
Sbjct: 355 KDLQSLLQSPLTFDNYAERFDLLLYLEECQMHVDIKRYNKDSVTLHRDRDKRLMGLNLPG 414
Query: 295 LAERRPSLVHGDFVFV----KLAAANADAKKGSIYRVEADEVILKFAKEFHTQ-HRNGSL 349
++E RPS++ GD + + ++ +N KG ++RVE D+V L +K F + +
Sbjct: 415 VSENRPSVLRGDHLLLTKSEEVTFSNVTKYKGYVHRVELDQVKLGLSKRFLKDVYIDKMK 474
Query: 350 YNVSFTYNRINMRRMYQAVQAA--ENLEPNLLFPSQSTKRRSIKAAPFVPFN---SLNEE 404
+ V FT NRI +R ++AV A NL+ ++LFP S + F+ N +
Sbjct: 475 FRVEFTVNRIPVRLQHRAVHMAVQHNLK-DVLFPMASRSLNPVSPPALRLFDRKLEYNFQ 533
Query: 405 QTRSV-EIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
Q +V I+ G PY+++GPPGTGKT+T+VEAI QV + IL CA SNSAAD
Sbjct: 534 QYSAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQ 593
Query: 464 MLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRII 523
+ E+LI++E + ++I RL A+SR +D+P C +E + P +E L Y+I+
Sbjct: 594 LCEKLITSE--HVDAHKIYRLYASSRNQKDIPKILKDNCNVDEEMIDFPCKEDLMSYKIL 651
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQT-VVVLAGDPKQL 582
I T +++ L T G +F+H F+DEAG A E E++I +A L + +VLAGDPKQL
Sbjct: 652 ICTLVTAGRLVTGGFSEDHFTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQL 711
Query: 583 GPVIYSKDAETFGLGKSYLERLF-ECEFYRNGD----EGYVTKLVRNYRCHPAILDLPSK 637
GP++ S A GL S LERL + + Y+ GD YV+KL+ NYR HP IL++P++
Sbjct: 712 GPILRSPLAINHGLDVSLLERLMTQNDLYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNR 771
Query: 638 LFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVV 697
LFY GEL AC D+ +S + P+K FPV+F G+ G DERE N+PS+FN +E++ +V
Sbjct: 772 LFYDGELKACADEISSNQYCMWEHLPSKGFPVIFHGVPGKDERESNSPSFFNIYEINILV 831
Query: 698 DIINKL------RENTELNETDIGVITPYRQQVLKIKKVLET-WDMPD------VKVGTV 744
D + KL + + + DIG+I PYR+QV KIK+ ++ D D +KVG+V
Sbjct: 832 DYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDADKDFQDYMGIDNLKVGSV 891
Query: 745 EQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
E+FQGQER+VI+VSTVRS+VK+ D T+ +GFL N +RFNVA+TRA+SLLI+VGNP I+
Sbjct: 892 EEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNVAVTRAKSLLIMVGNPMIL 951
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 241/586 (41%), Positives = 364/586 (62%)
Query: 250 NYFSFFSTLLVMEELRLEEDMRCHSMECVTM-RRKGAHLLALDVPGLAERRPSLVHGDFV 308
NY F LL +EE ++ D++ ++ + V+M R + LL L++PG++E RPS++ GD +
Sbjct: 365 NYMDRFDLLLYLEEDQMRMDIKRYNKKDVSMVRDRDKKLLVLELPGVSENRPSVLRGDHL 424
Query: 309 FV----KLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRM 364
+ +L +N KG ++RVE D+V L F+K + + ++V FT NR+ +R
Sbjct: 425 LLTKSEELQNSNVTKYKGYVHRVELDQVKLGFSKRLLERFIDNMKFSVEFTINRLPLRLQ 484
Query: 365 YQAVQ-AAENLEPNLLFPSQSTKRRSIKAAPFVPFNSL---NEEQTRSV-EIILGCKGAP 419
++AV ++ ++LFP S + + + F+ N EQ +V I+ G
Sbjct: 485 HRAVHMVVQHHLKDVLFPVASRRLNPVSPSALRLFDQKLEKNPEQKTAVCNIVAGTSKPA 544
Query: 420 PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKEN 479
PY+++GPPGTGKT+T+VEAI QV +RIL CA SNSAAD + E+LI+++ +
Sbjct: 545 PYLVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQLGEKLITSQ--HVDAR 602
Query: 480 EILRLNATSRPYEDVPTDFIRFCFFE-ESI-FKCPPREALGRYRIIISTYMSSSLLNTNG 537
I R+ A+SR +++P E E+I F C +E L Y+I++ T +++ L + G
Sbjct: 603 NIYRIYASSRNPKEIPKVLENNSNVEGENIIFPC--KEDLMPYKIVVCTLVTAGRLVSGG 660
Query: 538 IKRGNFSHIFLDEAGQASEPESMIPIANLCTKQT-VVVLAGDPKQLGPVIYSKDAETFGL 596
G+FSHIF+DEAG A EPE +I +A L +T +VLAGDPKQLGP++ S A +GL
Sbjct: 661 FPVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGL 720
Query: 597 GKSYLERLF-ECEFYRNGDEG----YVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDA 651
G S LERL + E Y+ GD G YVTKL++NYR HP+IL +P++LFY EL AC D+
Sbjct: 721 GLSLLERLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADEI 780
Query: 652 TSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RE 705
+S + P + FPV+F G+ G DERE +PS+FN E+ K++D + KL +
Sbjct: 781 SSRQYCTWEHLPKRGFPVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLLTQAKKG 840
Query: 706 NTELNETDIGVITPYRQQVLKIKKVLETW-------DMPDVKVGTVEQFQGQEREVIIVS 758
+++ DIG+I PYR+QV KI++ ++ + ++KVG+VE+FQGQER+VIIVS
Sbjct: 841 IAKISPKDIGIIAPYRKQVEKIRQAIKIHRELKSLSGIEELKVGSVEEFQGQERKVIIVS 900
Query: 759 TVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
TVRS+ +H D + +GFL N +RFNVA+TRA++LLI+VGNP I+
Sbjct: 901 TVRSSKEHIILDDKFNIGFLKNEKRFNVAVTRAKALLIMVGNPIIL 946
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 202/498 (40%), Positives = 294/498 (59%)
Query: 240 QFLVEG-LVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAER 298
Q L+E L +NY F LL +EE++LE D+R + ++ V M + A LL L+VPG+AE
Sbjct: 321 QSLLEAPLQPENYKQKFELLLHLEEIQLEVDIRRYDLQEVPMVQNRA-LLLLNVPGVAEN 379
Query: 299 RPSLVHGDFVFVKLAAANADAK----KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSF 354
RPS++ GD +F L++ + KG ++ VE + V L F+ + + N ++V+F
Sbjct: 380 RPSVLRGDHLFASLSSERDSSPRVLYKGYVHGVELERVQLGFSPKLMKKFVNDLKFDVTF 439
Query: 355 TYNRINMRRMYQAVQAA--ENLEPNLLFPSQSTKRRSIKAAPFVP--FN---SLNEEQTR 407
T+NR+ ++ ++A A + L+ ++LFPS S +R S+ F P F+ NEEQ +
Sbjct: 440 TFNRLPLQVQHRAAAMAMQKGLD-SVLFPSASCQR-SLFTGIFQPRWFDRKVEANEEQCQ 497
Query: 408 SVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLE 466
+V+ I+ G PY+I+GPPGTGKT+TLVEAI QV+S + +RIL CA SNSAAD + +
Sbjct: 498 AVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQ 557
Query: 467 RLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKC---PPREALGRYRII 523
RL++N I I R+ A+S Y+DVP D C +++S KC P ++ L YRI+
Sbjct: 558 RLLTN----IAPRYIYRIMASSANYKDVPADVRPCCNWDDSE-KCYVYPSKKLLKPYRIL 612
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTV--------VVL 575
I+T +++ L + G FSH+F+DE G A EPES++ IA L T +VL
Sbjct: 613 ITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPNGGQLVL 672
Query: 576 AGDPKQLGPVIYSKDAETFGLGKSYLERLF-ECEFYRNGDEGY----VTKLVRNYRCHPA 630
AGDP+QLGPV S A GLG S LERL Y DEGY VTKL+ NYR H A
Sbjct: 673 AGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKA 732
Query: 631 ILDLPSKLFYGGELLACKDDATSLSS--AKVDIFPNKDFPVLFFGIQGCDEREGNNPSWF 688
IL +P++LFY EL A + + + + PN+ P++F G+ G DERE +PS+F
Sbjct: 733 ILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFF 792
Query: 689 NRFEVSKVVDIINKLREN 706
N E+ VV + KL ++
Sbjct: 793 NTAEIEVVVQYLQKLLQS 810
Score = 583 (210.3 bits), Expect = 3.4e-97, Sum P(2) = 3.4e-97
Identities = 177/550 (32%), Positives = 285/550 (51%)
Query: 52 FVQGKPQSILVGETSKCSITIQNTTP-EPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDP 110
F++GK +V E + + I+ + + + +++ + A ++TL P +
Sbjct: 123 FIRGKHGVEIVSEYDQANGQIRFPVALDKTKTFTVQVQ-NHGAEAVTLHRCRPLRRLQEL 181
Query: 111 Q--KDQGFLEGFSIEDRVLQPLRTLTIWLSCKPKEMGLHKSVVQFDIG---DDRFE--RM 163
+QG +G ++ VL P I + C G ++VV F+ D F R
Sbjct: 182 SFLDEQGVTQGQAL---VLHPGGAYPIQVRCLTSHNGFFRAVVMFEFSKEPDGSFSIGRS 238
Query: 164 VLLLAEDSVSRSLASNRPYSRVPRKMQSAVDEYVXXXXXXXXXXXXXXXXXGSNYKLPEF 223
+ +A+ ++R L + PY +Q + L +
Sbjct: 239 IAAIAQSPLARELGPSAPYRPYQASLQRPI---TVVTEDGVPPVSSLKNELEKEIPLGTY 295
Query: 224 PIPNDVRES--LANKILP-------QFLVEG-LVRKNYFSFFSTLLVMEELRLEEDMRCH 273
P P ++E+ L K P Q L+E L +NY F LL +EE++LE D+R +
Sbjct: 296 PYPKSLKETIMLGPKTSPDSSWMKMQSLLEAPLQPENYKQKFELLLHLEEIQLEVDIRRY 355
Query: 274 SMECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAK----KGSIYRVEA 329
++ V M + A LL L+VPG+AE RPS++ GD +F L++ + KG ++ VE
Sbjct: 356 DLQEVPMVQNRA-LLLLNVPGVAENRPSVLRGDHLFASLSSERDSSPRVLYKGYVHGVEL 414
Query: 330 DEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAA--ENLEPNLLFPSQSTKR 387
+ V L F+ + + N ++V+FT+NR+ ++ ++A A + L+ ++LFPS S +R
Sbjct: 415 ERVQLGFSPKLMKKFVNDLKFDVTFTFNRLPLQVQHRAAAMAMQKGLD-SVLFPSASCQR 473
Query: 388 RSIKAAPFVP--FN---SLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQ 441
S+ F P F+ NEEQ ++V+ I+ G PY+I+GPPGTGKT+TLVEAI Q
Sbjct: 474 -SLFTGIFQPRWFDRKVEANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQ 532
Query: 442 VYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRF 501
V+S + +RIL CA SNSAAD + +RL++N I I R+ A+S Y+DVP D
Sbjct: 533 VWSCFKDARILACAPSNSAADLLCQRLLTN----IAPRYIYRIMASSANYKDVPADVRPC 588
Query: 502 CFFEESIFKC---PPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPE 558
C +++S KC P ++ L YRI+I+T +++ L + G FSH+F+DE G A EPE
Sbjct: 589 CNWDDSE-KCYVYPSKKLLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPE 647
Query: 559 SMIPIANLCT 568
S++ IA L T
Sbjct: 648 SVVAIAGLLT 657
Score = 416 (151.5 bits), Expect = 3.4e-97, Sum P(2) = 3.4e-97
Identities = 89/204 (43%), Positives = 135/204 (66%)
Query: 617 YVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSS--AKVDIFPNKDFPVLFFGI 674
+VTKL+ NYR H AIL +P++LFY EL A + + + + PN+ P++F G+
Sbjct: 719 FVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGV 778
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKLRENT------ELNETDIGVITPYRQQVLKIK 728
G DERE +PS+FN E+ VV + KL ++ ++ +IG+I+PYR+QV KI+
Sbjct: 779 CGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIR 838
Query: 729 KVLETWD-----MPDV---KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSN 780
+ + D +PD+ KVG+VE+FQGQER VI++STVRS ++ + D+T+ LGFL N
Sbjct: 839 LAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKN 898
Query: 781 PRRFNVAITRARSLLIIVGNPHIV 804
P+R NVA+TRA++LLI+VGN ++
Sbjct: 899 PKRLNVALTRAKALLIVVGNAAVL 922
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 893 (319.4 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 214/515 (41%), Positives = 307/515 (59%)
Query: 321 KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNL 378
KG +++VE D V L F+ ++ +G + V+FT+NR +R ++A++ LEP +
Sbjct: 414 KGFVHKVELDRVKLSFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWPLEP-M 472
Query: 379 LFPSQSTK----RRSIKAAPFVPFNSLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTM 433
LFP S +K + N EQ ++++ I++G PY+I+GPPGTGKT+
Sbjct: 473 LFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTV 532
Query: 434 TLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYED 493
TLVEAI QV + IL CA SNS AD + +RL + + I RL A SR
Sbjct: 533 TLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIHL 587
Query: 494 VPTDFIRFCFFE--ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEA 551
VP D C ++ + F P ++ L YR++I+T +++S L + +F+HIF+DEA
Sbjct: 588 VPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEA 647
Query: 552 GQASEPESMIPIANLC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLF 605
G A EPES++ IA L K+ +VLAGDP+QLGPV+ + GLG S LERL
Sbjct: 648 GHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLL 707
Query: 606 ECE-FYRNGDEGY----VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVD 660
Y+ G +GY +TKL+RNYR HP ILD+P++L+Y GEL AC D + +
Sbjct: 708 TFNALYKKGPDGYNPQFITKLLRNYRSHPTILDVPNRLYYDGELQACADVVDRERFCRWE 767
Query: 661 IFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDI 714
P +DFP++F G+ G DEREGN+PS+FN E + V + +L + L+ +
Sbjct: 768 GLPRQDFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSV 827
Query: 715 GVITPYRQQVLKIK-------KVLETWD-MPDVKVGTVEQFQGQEREVIIVSTVRSTVKH 766
GVI+PYR+QV KI+ K L D + D+KVG+VE+FQGQER VI++STVRS+
Sbjct: 828 GVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 887
Query: 767 NEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
+ D + LGFL NP+RFNVA+TRA++LLI+VGNP
Sbjct: 888 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP 922
Score = 547 (197.6 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 147/393 (37%), Positives = 219/393 (55%)
Query: 249 KNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR----RKGAHLLALDVPGLAERRPSLVH 304
+NY LL +EEL++E D+R + +E V M + LL L+VPG+AE RPS++
Sbjct: 334 RNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPIDRNPRLLTLEVPGVAESRPSVLR 393
Query: 305 GDFVFVKLAAA--NAD--AKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRIN 360
GD +F L++ + D KG +++VE D V L F+ ++ +G + V+FT+NR
Sbjct: 394 GDHLFALLSSETHHEDPVTYKGFVHKVELDRVKLSFSTSLLSRFVDGLTFKVNFTFNRQP 453
Query: 361 MRRMYQAVQAAEN--LEPNLLFPSQSTK----RRSIKAAPFVPFNSLNEEQTRSVE-IIL 413
+R ++A++ LEP +LFP S +K + N EQ ++++ I++
Sbjct: 454 LRVQHRALELTGRWPLEP-MLFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKHIVM 512
Query: 414 GCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEV 473
G PY+I+GPPGTGKT+TLVEAI QV + IL CA SNS AD + +RL +
Sbjct: 513 GTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVH-- 570
Query: 474 AGIKENEILRLNATSRPYEDVPTDFIRFCFFE--ESIFKCPPREALGRYRIIISTYMSSS 531
+ I RL A SR VP D C ++ + F P ++ L YR++I+T +++S
Sbjct: 571 ---LPSSIYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVLITTLITAS 627
Query: 532 LLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLC-TKQT-----VVVLAGDPKQLGPV 585
L + +F+HIF+DEAG A EPES++ IA L K+ +VLAGDP+QLGPV
Sbjct: 628 RLVSAQFPIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPV 687
Query: 586 IYSKDAETFGLGKSYLERLFECE-FYRNGDEGY 617
+ + GLG S LERL Y+ G +GY
Sbjct: 688 LRCPLTQKHGLGYSLLERLLTFNALYKKGPDGY 720
Score = 45 (20.9 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWG 84
D SV +++DP P ++++ P V S+L G+ ++ + +PV G
Sbjct: 359 DLESVPMTWDPIDRNPRLLTLEVPGVAESRPSVLRGDHLFALLSSETHHEDPVTYKG 415
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 883 (315.9 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 216/518 (41%), Positives = 309/518 (59%)
Query: 321 KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNL 378
KG +++VE D V L F+ ++ +G + V+FT+NR +R ++A++ L P +
Sbjct: 415 KGFVHKVELDRVKLSFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWVLWP-M 473
Query: 379 LFPSQSTKRRSIKAAPF-VPFN----SL--NEEQTRSVE-IILGCKGAPPYVIYGPPGTG 430
LFP S R + P V F SL N EQ ++++ I+ G PY+I+GPPGTG
Sbjct: 474 LFPVAS---RGVSLLPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGTG 530
Query: 431 KTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRP 490
KT+TLVEAI QV + IL CA SNS AD + +RL + + I RL A SR
Sbjct: 531 KTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRD 585
Query: 491 YEDVPTDFIRFCFFE--ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFL 548
VP D C ++ + + P ++ L +YR++I+T +++S L + +F+HIF+
Sbjct: 586 IRMVPEDIKTCCNWDAKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFI 645
Query: 549 DEAGQASEPESMIPIANLC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
DEAG EPES++ IA L K+T +VLAGDP+QLGPV+ S A GLG S LE
Sbjct: 646 DEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLE 705
Query: 603 RLFECE-FYRNGDEGY----VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSA 657
RL Y+ G GY +TKL+RNYR HP ILD+P++L+Y GEL AC D
Sbjct: 706 RLLAYNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQACADVVDRERFC 765
Query: 658 KVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNE 711
+ + P + FP++F G+ G DEREGN+PS+FN E + V + +L + L+
Sbjct: 766 RWEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSP 825
Query: 712 TDIGVITPYRQQVLKIKKVLETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRST 763
++GVI+PYR+QV KI+ + D + D+KVG+VE+FQGQER VI++STVRS+
Sbjct: 826 RNVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 885
Query: 764 VKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
+ D + LGFL NP+RFNVA+TRA++LLI+VGNP
Sbjct: 886 QSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP 923
Score = 542 (195.9 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 157/422 (37%), Positives = 228/422 (54%)
Query: 223 FPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR- 281
F P +V E A L L +NY LL +EEL++E D+R + ++ V M
Sbjct: 315 FTAPKEVAEIKAQ------LETTLKSRNYEVKLRLLLHLEELQMEHDIRHYDLDSVPMTW 368
Query: 282 ---RKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANAD----AKKGSIYRVEADEVIL 334
+ LL L+VPG+AE RPS++ GD +F L++ KG +++VE D V L
Sbjct: 369 DPVDQNPRLLTLEVPGVAESRPSVLRGDHLFALLSSETQQDDPVTYKGFVHKVELDRVKL 428
Query: 335 KFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNLLFPSQSTKRRSIKA 392
F+ ++ +G + V+FT+NR +R ++A++ L P +LFP S R +
Sbjct: 429 SFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWVLWP-MLFPVAS---RGVSL 484
Query: 393 APF-VPFN----SL--NEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYS 444
P V F SL N EQ ++++ I+ G PY+I+GPPGTGKT+TLVEAI QV
Sbjct: 485 LPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVK 544
Query: 445 TREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFF 504
+ IL CA SNS AD + +RL + + I RL A SR VP D C +
Sbjct: 545 HLPKAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIRMVPEDIKTCCNW 599
Query: 505 E--ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIP 562
+ + + P ++ L +YR++I+T +++S L + +F+HIF+DEAG EPES++
Sbjct: 600 DAKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVA 659
Query: 563 IANLC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDE 615
IA L K+T +VLAGDP+QLGPV+ S A GLG S LERL Y+ G
Sbjct: 660 IAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPN 719
Query: 616 GY 617
GY
Sbjct: 720 GY 721
Score = 49 (22.3 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 30 DHSVLSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWG 84
D +++DP + P ++++ P V S+L G+ ++ + +PV G
Sbjct: 362 DSVPMTWDPVDQNPRLLTLEVPGVAESRPSVLRGDHLFALLSSETQQDDPVTYKG 416
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 881 (315.2 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 215/518 (41%), Positives = 307/518 (59%)
Query: 321 KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNL 378
KG +++VE D V L F+ ++ +G + V+FT+NR +R ++A++ L P L
Sbjct: 415 KGFVHKVELDRVKLSFSPSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWVLWPTL 474
Query: 379 LFPSQSTKRRSIKAAPF-VPFN----SL--NEEQTRSVE-IILGCKGAPPYVIYGPPGTG 430
FP S R + P V F SL N EQ ++++ I+ G PY+I+GPPGTG
Sbjct: 475 -FPVAS---RGVSLLPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGTG 530
Query: 431 KTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRP 490
KT+TLVEAI QV + IL C SNS AD + +RL + + I RL A SR
Sbjct: 531 KTVTLVEAIKQVVKHLPKAHILACTPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRD 585
Query: 491 YEDVPTDFIRFCFFE--ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFL 548
VP D C ++ + + P ++ L +YR++I+T +++S L + +F+HIF+
Sbjct: 586 IRMVPEDIKTCCNWDPKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFI 645
Query: 549 DEAGQASEPESMIPIANLC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
DEAG EPES++ IA L K+T +VLAGDP+QLGPV+ S A+ GLG S LE
Sbjct: 646 DEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQKHGLGYSLLE 705
Query: 603 RLFECE-FYRNGDEGY----VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSA 657
RL Y+ G GY +TKL+RNYR HP ILD+P++L+Y GEL AC D
Sbjct: 706 RLLTYNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQACADVVDRERFC 765
Query: 658 KVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNE 711
+ + P + FP++F G+ G DEREGN+PS+FN E + V + +L + L+
Sbjct: 766 RWEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSP 825
Query: 712 TDIGVITPYRQQVLKIKKVLETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRST 763
+GVI+PYR+QV KI+ + D + D+KVG+VE+FQGQER VI++STVRS+
Sbjct: 826 RSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 885
Query: 764 VKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
+ D + LGFL NP+RFNVA+TRA++LLI+VGNP
Sbjct: 886 QSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP 923
Score = 538 (194.4 bits), Expect = 3.5e-49, P = 3.5e-49
Identities = 151/399 (37%), Positives = 220/399 (55%)
Query: 246 LVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR----RKGAHLLALDVPGLAERRPS 301
L +NY LL +EEL++E D+R + +E V M + LL L+VPG+ E RPS
Sbjct: 332 LKSRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLTLEVPGVTESRPS 391
Query: 302 LVHGDFVFVKLAAA--NAD--AKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYN 357
++ GD +F L++ D KG +++VE D V L F+ ++ +G + V+FT+N
Sbjct: 392 VLRGDHLFALLSSEIQQEDPVTYKGFVHKVELDRVKLSFSPSLLSRFVDGLTFKVNFTFN 451
Query: 358 RINMRRMYQAVQAAEN--LEPNLLFPSQSTKRRSIKAAPF-VPFN----SL--NEEQTRS 408
R +R ++A++ L P L FP S R + P V F SL N EQ ++
Sbjct: 452 RQPLRVQHRALELTGRWVLWPTL-FPVAS---RGVSLLPSDVKFKLYDRSLESNPEQLQA 507
Query: 409 VE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLER 467
++ I+ G PY+I+GPPGTGKT+TLVEAI QV + IL C SNS AD + +R
Sbjct: 508 MKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPSNSGADLLCQR 567
Query: 468 LISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE--ESIFKCPPREALGRYRIIIS 525
L + + I RL A SR VP D C ++ + + P ++ L +YR++I+
Sbjct: 568 LRVH-----LPSSIYRLLAPSRDIRMVPEDIKTCCNWDPKKGEYVYPAKKHLQQYRVLIT 622
Query: 526 TYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLC-TKQT-----VVVLAGDP 579
T +++S L + +F+HIF+DEAG EPES++ IA L K+T +VLAGDP
Sbjct: 623 TLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDP 682
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDEGY 617
+QLGPV+ S A+ GLG S LERL Y+ G GY
Sbjct: 683 RQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGY 721
Score = 46 (21.3 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWG 84
D SV +++DP + P ++++ P V S+L G+ ++ + +PV G
Sbjct: 360 DLESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSEIQQEDPVTYKG 416
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 199/422 (47%), Positives = 270/422 (63%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCA 455
FN LNE Q +V IL P PY+++GPPGTGKT+T++EA+LQV+ SRILVCA
Sbjct: 106 FNPVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCA 165
Query: 456 ASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR-FCFFEESIFKCPPR 514
SNSAAD + RL ++V +K ++R+NAT R +E+ + I+ +C E I++
Sbjct: 166 PSNSAADLVCLRLHESKV--LKPAAMVRVNATCR-FEETIIEAIKPYCRDGEDIWRA--- 219
Query: 515 EALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVV 574
R+RIII+T S+ L G++ G F+H+F+DEAGQASEPE +IP+ + +V
Sbjct: 220 ---SRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIV 276
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY----------VTKLVRN 624
LAGDP QLGPVI S+ A +GL S LERL Y + + VTKLV+N
Sbjct: 277 LAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKN 336
Query: 625 YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNN 684
YR H A+L LPS+LFY EL C D S + P K FP++F G++G + REG +
Sbjct: 337 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFHGVRGNEAREGRS 396
Query: 685 PSWFNRFEVSKVVDIINKLREN--TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
PSWF+ E +V+ L N ++++ DIGVITPYR+QV KIK +L D+ D+KVG
Sbjct: 397 PSWFSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVG 456
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPH 802
+VE+FQGQE VI++STVRS E DR Y LGFLSN +RFNVAITR ++LLI++GNPH
Sbjct: 457 SVEEFQGQEYLVIVISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPH 515
Query: 803 IV 804
++
Sbjct: 516 VL 517
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 213/547 (38%), Positives = 314/547 (57%)
Query: 216 SNYKLPEFP-IPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHS 274
+ YKL + +P +++ L + + L L KNY F LL +EE+++E D++ +
Sbjct: 324 AKYKLEDSEHLPASLKQHLPR--VRRLLDTQLCMKNYSERFHLLLHLEEIQMEVDIKKYD 381
Query: 275 M--ECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANAD---AKKGSIYRVEA 329
+ + +T+ + LL L VPG+AE RPS++ GD + V L+ +G ++RVE
Sbjct: 382 LYGKTMTLDKTNKKLLILKVPGVAENRPSVLRGDKLNVCLSDDRNQPITVYEGYVHRVEL 441
Query: 330 DEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQ-AAENLEPNLLFPSQSTKRR 388
D+VIL F+++ + N ++V F NR +R ++AV+ A ++ N+LFPS
Sbjct: 442 DKVILGFSRKLLQKFVNNMKFDVEFNINRFPLRLQHRAVELAVQHALGNVLFPSDKDTGH 501
Query: 389 SIKAAPFVP-FNS---LNEEQTRSVEIILGCKGAP-PYVIYGPPGTGKTMTLVEAILQVY 443
S P + FN N EQ +V+ IL P PY+I+GPPGTGKT+T+VEAI QV
Sbjct: 502 S--ELPHLSMFNKDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGTGKTVTVVEAIKQVD 559
Query: 444 STREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCF 503
++ S IL CA SNSA D + ERL+ + + + I RL A SR VP ++
Sbjct: 560 KSKAQSHILACAPSNSACDLLCERLLGH----VDAHRIYRLCAPSRDPRTVPQKLLKHSN 615
Query: 504 FEES--IFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMI 561
+ E+ F P +E L Y II+ T +++ L + G+ G+F+HIF+DEAGQA EPE +I
Sbjct: 616 WNEAQDSFLLPSKETLIGYSIIVVTLVTAGRLVSGGVAMGHFTHIFIDEAGQAVEPECII 675
Query: 562 PIANLCTK-QTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNG------ 613
IA L + +VLAGDP+QLGPV+ S A+ GLG+S LERL + Y+
Sbjct: 676 GIAGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLERLMKRNALYQKSQDDNSK 735
Query: 614 -DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF 672
D +VTKL+RNYR HPAIL +P++LFY EL + + + + P K FPV+F
Sbjct: 736 YDSRFVTKLLRNYRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGFPVVFH 795
Query: 673 GIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENT------ELNETDIGVITPYRQQVLK 726
G+ G DERE N+PS+FN E+ +V+ +N L + +L DIG+I PYR+QV K
Sbjct: 796 GVMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEK 855
Query: 727 IKKVLET 733
I+K L T
Sbjct: 856 IRKALNT 862
Score = 481 (174.4 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
Identities = 101/203 (49%), Positives = 138/203 (67%)
Query: 614 DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG 673
D +VTKL+RNYR HPAIL +P++LFY EL + + + + P K FPV+F G
Sbjct: 737 DSRFVTKLLRNYRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGFPVVFHG 796
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENT------ELNETDIGVITPYRQQVLKI 727
+ G DERE N+PS+FN E+ +V+ +N L + +L DIG+I PYR+QV KI
Sbjct: 797 VMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEKI 856
Query: 728 KKVLET------WDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNP 781
+K L T W D+KVG+VE+FQGQER+VIIVSTVRS+V + + D+ + +GFLSN
Sbjct: 857 RKALNTVGELKKWK--DIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNE 914
Query: 782 RRFNVAITRARSLLIIVGNPHIV 804
+RFNVA+TRA+ LLI+VGNP I+
Sbjct: 915 KRFNVAMTRAKGLLIVVGNPVIL 937
Score = 50 (22.7 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 23 GFIDFQDDHSVLSYDPSGEGPVIISVPFPFVQGKPQSIL 61
G +D VL+ DP GPV+ S P + G QS+L
Sbjct: 679 GLLDPLKGQLVLAGDPQQLGPVLRS-PLAQLHGLGQSLL 716
Score = 40 (19.1 bits), Expect = 5.2e-42, Sum P(2) = 5.2e-42
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 314 AANADAKKGSI-YRVEADEVILKFAKEFHTQHRN-GSLYNVSFTY-NRINMRRMYQAV-- 368
+++ A KG++ + +E E+ F +FH +++ G +Y FTY ++ R + V
Sbjct: 146 SSDPKATKGNVSFTIE--ELGKLFVVKFHIVNQSEGCIY---FTYYTALHKMRCFTLVDK 200
Query: 369 QAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPG 428
+ + P LL P + ++ V +N + + C P V PPG
Sbjct: 201 RRVNRVSPLLLCPGEDY---DVE----VHYNVNHPGHFPATMYFEFC----PEV--DPPG 247
Query: 429 TGKTMTLVEAILQVYST 445
T K +V + V T
Sbjct: 248 TAKPFCIVRELEAVVRT 264
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 202/498 (40%), Positives = 295/498 (59%)
Query: 240 QFLVEG-LVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAER 298
Q L+E L +NY F LL +EE++LE D+R + ++ V M + A LL L+VPG+AE
Sbjct: 89 QSLLEAPLQPENYKQKFELLLHLEEIQLEMDIRRYDLQEVPMVQNRA-LLLLNVPGVAEN 147
Query: 299 RPSLVHGDFVFVKLAAANADAK----KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSF 354
RPS++ GD +F L++ + KG ++ VE + V L F+ + + N ++V+F
Sbjct: 148 RPSVLRGDHLFASLSSERDSSPRVLYKGYVHGVELERVQLGFSPKLMKKFVNDLKFDVTF 207
Query: 355 TYNRINMRRMYQAVQAA--ENLEPNLLFPSQSTKRRSIKAAPFVP--FN---SLNEEQTR 407
T+NR+ ++ ++A A + L+ ++LFPS S +R S+ F P F+ NEEQ +
Sbjct: 208 TFNRLPLQVQHRAAAMAMQKGLD-SVLFPSASCQR-SLFTGIFQPRWFDRKVEANEEQCQ 265
Query: 408 SVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLE 466
+V+ I+ G PY+I+GPPGTGKT+TLVEAI QV+S + +RIL CA SNSAAD + +
Sbjct: 266 AVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQ 325
Query: 467 RLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKC---PPREALGRYRII 523
RL++N I I R+ A+S Y+DVP D C +++S KC P ++ L YRI+
Sbjct: 326 RLLTN----IAPRYIYRIMASSANYKDVPADVRPCCNWDDSE-KCYVYPSKKLLKPYRIL 380
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTV--------VVL 575
I+T +++ L + G FSH+F+DE G A EPES++ IA L T +VL
Sbjct: 381 ITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNRNGGQLVL 440
Query: 576 AGDPKQLGPVIYSKDAETFGLGKSYLERLF-ECEFYRNGDEGY----VTKLVRNYRCHPA 630
AGDP+QLGPV+ S A GLG S LERL Y DEGY VTKL+ NYR H A
Sbjct: 441 AGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKA 500
Query: 631 ILDLPSKLFYGGELLACKDDATSLSS--AKVDIFPNKDFPVLFFGIQGCDEREGNNPSWF 688
IL +P++LFY EL A + + + + PN+ P++F G+ G DERE +PS+F
Sbjct: 501 ILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFF 560
Query: 689 NRFEVSKVVDIINKLREN 706
N E+ VV + KL ++
Sbjct: 561 NTAEIEVVVQYLQKLLQS 578
Score = 416 (151.5 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 89/204 (43%), Positives = 135/204 (66%)
Query: 617 YVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSS--AKVDIFPNKDFPVLFFGI 674
+VTKL+ NYR H AIL +P++LFY EL A + + + + PN+ P++F G+
Sbjct: 487 FVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGV 546
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKLRENT------ELNETDIGVITPYRQQVLKIK 728
G DERE +PS+FN E+ VV + KL ++ ++ +IG+I+PYR+QV KI+
Sbjct: 547 CGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIR 606
Query: 729 KVLETWD-----MPDV---KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSN 780
+ + D +PD+ KVG+VE+FQGQER VI++STVRS ++ + D+T+ LGFL N
Sbjct: 607 LAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKN 666
Query: 781 PRRFNVAITRARSLLIIVGNPHIV 804
P+R NVA+TRA++LLI+VGN ++
Sbjct: 667 PKRLNVALTRAKALLIVVGNAAVL 690
Score = 38 (18.4 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 33 VLSYDPSGEGPVIISVPFPFVQGKPQSIL 61
VL+ DP GPV+ S P G S+L
Sbjct: 439 VLAGDPQQLGPVLRS-PLAAQHGLGTSLL 466
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 204/547 (37%), Positives = 301/547 (55%)
Query: 223 FPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR- 281
F P ++ E A L L +NY LL +EEL++E D+R + +E V M
Sbjct: 314 FTAPKEIAEIKAQ------LEAALKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTW 367
Query: 282 ---RKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAAN--ADAK--KGSIYRVEADEVIL 334
+ LL L+VPG+AE RPS++ GD +F L++ DA KG ++RVE D V L
Sbjct: 368 DPIDQNPRLLTLEVPGVAESRPSVLRGDHLFAVLSSETHQEDAVTYKGFVHRVELDRVKL 427
Query: 335 KFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNLLFPSQSTK----RR 388
F+ + +G + V+FT+NR +R ++A++ L P +LFP S
Sbjct: 428 SFSASLLDRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWPLWP-MLFPVASRGVPLLPS 486
Query: 389 SIKAAPFVPFNSLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
+K + N EQ ++++ I++G PY+I+GPPGTGKT+TLVEAI QV
Sbjct: 487 DVKLKLYDRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP 546
Query: 448 HSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE-- 505
+ IL CA SNS AD + +RL + + I RL A SR VP D C ++
Sbjct: 547 KAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIRLVPEDIKPCCNWDAQ 601
Query: 506 ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIAN 565
+ + P ++ L YR++I+T +++S L + +F+HIF+DEAG + EPES++ IA
Sbjct: 602 KGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAG 661
Query: 566 LC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDEGY- 617
L K+ +VLAGDP+QLGPV+ + GLG S LERL Y+ G +GY
Sbjct: 662 LLEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALYKKGPDGYN 721
Query: 618 ---VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI 674
+TKL+RNYR HP ILD+P++L+Y GEL AC D + + P + FP++F G+
Sbjct: 722 PQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGV 781
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLKIK 728
G DEREGN+PS+FN E + V + +L + L+ +GVI+PYR+QV KI+
Sbjct: 782 MGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIR 841
Query: 729 KVLETWD 735
+ D
Sbjct: 842 HCITKLD 848
Score = 459 (166.6 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 93/199 (46%), Positives = 132/199 (66%)
Query: 617 YVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQG 676
++TKL+RNYR HP ILD+P++L+Y GEL AC D + + P + FP++F G+ G
Sbjct: 724 FITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGVMG 783
Query: 677 CDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLKIKKV 730
DEREGN+PS+FN E + V + +L + L+ +GVI+PYR+QV KI+
Sbjct: 784 KDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIRHC 843
Query: 731 LETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPR 782
+ D + D+KVG+VE+FQGQER VI++STVRS+ + D + LGFL NP+
Sbjct: 844 ITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 783 RFNVAITRARSLLIIVGNP 801
RFNVA+TRA++LLI+VGNP
Sbjct: 904 RFNVAVTRAKALLIVVGNP 922
Score = 44 (20.5 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGE 64
D SV +++DP + P ++++ P V S+L G+
Sbjct: 359 DLESVPMTWDPIDQNPRLLTLEVPGVAESRPSVLRGD 395
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 203/547 (37%), Positives = 299/547 (54%)
Query: 223 FPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR- 281
F P ++ E A L L ++Y F LL +EEL++E D+R + +E V M
Sbjct: 314 FTAPKEIAEIKAQ------LETALQWRSYEVKFRLLLHLEELQMEHDIRHYDLESVPMTW 367
Query: 282 ---RKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAK----KGSIYRVEADEVIL 334
+ LL L+VPG+ E RPS++ GD +F L++ KG +++VE D V L
Sbjct: 368 DPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKGFVHKVELDRVKL 427
Query: 335 KFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNLLFPSQSTK----RR 388
F+ ++ +G + V+FT+NR +R ++A++ L P +LFP S
Sbjct: 428 SFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWPLWP-MLFPVASRGVPLLPS 486
Query: 389 SIKAAPFVPFNSLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
+K + N EQ ++++ II+G PY+I+GPPGTGKT+TLVEAI QV
Sbjct: 487 DVKLKLYDRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP 546
Query: 448 HSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE-- 505
+ IL CA SNS AD + +RL + + I RL A SR VP D C ++
Sbjct: 547 KAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIRMVPEDIKPCCNWDAK 601
Query: 506 ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIAN 565
+ + P ++ L YR++I+T +++S L + +F+HIF+DEAG + EPES++ IA
Sbjct: 602 KGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAG 661
Query: 566 LC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDEGY- 617
L K+T +VLAGDP+QLGPV+ S + GLG S LERL Y+ G GY
Sbjct: 662 LMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYN 721
Query: 618 ---VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI 674
+TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++F G+
Sbjct: 722 PQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGV 781
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLKIK 728
G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV KI+
Sbjct: 782 MGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIR 841
Query: 729 KVLETWD 735
+ D
Sbjct: 842 HCITKLD 848
Score = 454 (164.9 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 95/205 (46%), Positives = 133/205 (64%)
Query: 612 NG-DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVL 670
NG + ++TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++
Sbjct: 718 NGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPII 777
Query: 671 FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQV 724
F G+ G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV
Sbjct: 778 FHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQV 837
Query: 725 LKIKKVLETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
KI+ + D + D+KVG+VE+FQGQER VI++STVRS+ + D + LG
Sbjct: 838 EKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLG 897
Query: 777 FLSNPRRFNVAITRARSLLIIVGNP 801
FL NP+RFNVA+TRA++LLI+VGNP
Sbjct: 898 FLKNPKRFNVAVTRAKALLIVVGNP 922
Score = 48 (22.0 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWG 84
D SV +++DP + P ++++ P V S+L G+ ++ + +PV G
Sbjct: 359 DLESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKG 415
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 203/547 (37%), Positives = 299/547 (54%)
Query: 223 FPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR- 281
F P ++ E A L L ++Y F LL +EEL++E D+R + +E V M
Sbjct: 294 FTAPKEIAEIKAQ------LETALQWRSYEVKFRLLLHLEELQMEHDIRHYDLESVPMTW 347
Query: 282 ---RKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAK----KGSIYRVEADEVIL 334
+ LL L+VPG+ E RPS++ GD +F L++ KG +++VE D V L
Sbjct: 348 DPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKGFVHKVELDRVKL 407
Query: 335 KFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNLLFPSQSTK----RR 388
F+ ++ +G + V+FT+NR +R ++A++ L P +LFP S
Sbjct: 408 SFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWPLWP-MLFPVASRGVPLLPS 466
Query: 389 SIKAAPFVPFNSLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
+K + N EQ ++++ II+G PY+I+GPPGTGKT+TLVEAI QV
Sbjct: 467 DVKLKLYDRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP 526
Query: 448 HSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE-- 505
+ IL CA SNS AD + +RL + + I RL A SR VP D C ++
Sbjct: 527 KAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIRMVPEDIKPCCNWDAK 581
Query: 506 ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIAN 565
+ + P ++ L YR++I+T +++S L + +F+HIF+DEAG + EPES++ IA
Sbjct: 582 KGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAG 641
Query: 566 LC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDEGY- 617
L K+T +VLAGDP+QLGPV+ S + GLG S LERL Y+ G GY
Sbjct: 642 LMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYN 701
Query: 618 ---VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI 674
+TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++F G+
Sbjct: 702 PQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGV 761
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLKIK 728
G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV KI+
Sbjct: 762 MGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIR 821
Query: 729 KVLETWD 735
+ D
Sbjct: 822 HCITKLD 828
Score = 454 (164.9 bits), Expect = 9.2e-40, Sum P(2) = 9.2e-40
Identities = 95/205 (46%), Positives = 133/205 (64%)
Query: 612 NG-DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVL 670
NG + ++TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++
Sbjct: 698 NGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPII 757
Query: 671 FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQV 724
F G+ G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV
Sbjct: 758 FHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQV 817
Query: 725 LKIKKVLETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
KI+ + D + D+KVG+VE+FQGQER VI++STVRS+ + D + LG
Sbjct: 818 EKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLG 877
Query: 777 FLSNPRRFNVAITRARSLLIIVGNP 801
FL NP+RFNVA+TRA++LLI+VGNP
Sbjct: 878 FLKNPKRFNVAVTRAKALLIVVGNP 902
Score = 48 (22.0 bits), Expect = 9.2e-40, Sum P(2) = 9.2e-40
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWG 84
D SV +++DP + P ++++ P V S+L G+ ++ + +PV G
Sbjct: 339 DLESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKG 395
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 202/549 (36%), Positives = 295/549 (53%)
Query: 223 FPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMR- 281
F P ++ E A L L +NY LL +EEL++E D+R + +E V M
Sbjct: 314 FTAPKEIAEIKAQ------LETALKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTW 367
Query: 282 ---RKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAK----KGSIYRVEADEVIL 334
+ LL L+VPG+ E RPS++ GD +F L++ KG +++VE D V L
Sbjct: 368 DPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKVELDRVKL 427
Query: 335 KFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAEN--LEPNLLFPSQSTK----RR 388
F+ ++ +G + V+FT+NR +R ++A++ L P +LFP
Sbjct: 428 SFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWP-MLFPVAPRDVPLLPS 486
Query: 389 SIKAAPFVPFNSLNEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
+K + N EQ +++ I+ G PY+I+GPPGTGKT+TLVEAI QV
Sbjct: 487 DVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP 546
Query: 448 HSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE-- 505
+ IL CA SNS AD + +RL + + I RL A SR VP D C ++
Sbjct: 547 KAHILACAPSNSGADLLCQRLRVH-----LPSSIYRLLAPSRDIRMVPEDIKPCCNWDAK 601
Query: 506 --ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPI 563
E +F P ++ L YR++I+T +++ L + +F+HIF+DEAG EPES++ I
Sbjct: 602 KGEYVF--PAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAI 659
Query: 564 ANLC-TKQT-----VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE-FYRNGDEG 616
A L K+T +VLAGDP+QLGPV+ S + GLG S LERL Y+ G +G
Sbjct: 660 AGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDG 719
Query: 617 Y----VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF 672
Y +TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++F
Sbjct: 720 YDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFH 779
Query: 673 GIQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLK 726
G+ G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV K
Sbjct: 780 GVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEK 839
Query: 727 IKKVLETWD 735
I+ + D
Sbjct: 840 IRYCITKLD 848
Score = 455 (165.2 bits), Expect = 6.2e-40, Sum P(2) = 6.2e-40
Identities = 95/202 (47%), Positives = 131/202 (64%)
Query: 614 DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG 673
D ++TKL+RNYR HP ILD+P++L+Y GEL AC D + P + FP++F G
Sbjct: 721 DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG 780
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKL------RENTELNETDIGVITPYRQQVLKI 727
+ G DEREGN+PS+FN E + V + L + L+ +GVI+PYR+QV KI
Sbjct: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI 840
Query: 728 KKVLETWD--------MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLS 779
+ + D + D+KVG+VE+FQGQER VI++STVRS+ + D + LGFL
Sbjct: 841 RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK 900
Query: 780 NPRRFNVAITRARSLLIIVGNP 801
NP+RFNVA+TRA++LLIIVGNP
Sbjct: 901 NPKRFNVAVTRAKALLIIVGNP 922
Score = 49 (22.3 bits), Expect = 6.2e-40, Sum P(2) = 6.2e-40
Identities = 16/76 (21%), Positives = 36/76 (47%)
Query: 29 DDHSV-LSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWGI-- 85
D SV +++DP + P ++++ P V S+L G+ ++ + +P+ G
Sbjct: 359 DLESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVH 418
Query: 86 RIYCSEPANSLTLSLM 101
++ S ++SL+
Sbjct: 419 KVELDRVKLSFSMSLL 434
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 589 (212.4 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 166/484 (34%), Positives = 255/484 (52%)
Query: 346 NGSLYNVSFTYNRINMRRMYQAVQAAENLEPN----LLFPSQSTKRRSIKAAPFVPFN-- 399
+ + Y + F R MR Y+A+Q + +LFP + + A+ + N
Sbjct: 479 DNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIPN--TPLASGVLQLNNK 536
Query: 400 --SLNEEQTRSV-EIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAA 456
S N EQ ++V +I L + PY+++GPPGTGKT T+VEAI Q+Y R + ILV A
Sbjct: 537 LISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAG 596
Query: 457 SNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEES----IFKCP 512
SN+A D + RL+ +A +++ L D D I E S + P
Sbjct: 597 SNTACDEVALRLL-RAIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYP 655
Query: 513 PREALGRYRIIISTYMSSSLLNTNGIKRGN-FSHIFLDEAGQASEPESMIPIANLCTKQT 571
+A+ +YRI+I T + L+T G N ++H+F+DEA ++E E ++ I +
Sbjct: 656 AVQAVHQYRIVICTLSLAGKLSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTL 715
Query: 572 VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEG-Y----VTKLVRNYR 626
++L+GD KQLGPV+ S+ A +GLG + ERL + + Y+ ++G Y T+L+RN+R
Sbjct: 716 NLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFR 775
Query: 627 CHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPS 686
HP I+ L + ++Y G L PN FP++F + G ++ S
Sbjct: 776 SHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVS 835
Query: 687 WFNRFEVSKVVDIINKLRE---NTE-LNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
N E+ V+D + L N E L +TDIG+I+PY+ Q +I++ L + + G
Sbjct: 836 LCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCG 895
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPH 802
+VE FQG+E+ VIIVS VRS F T LGFL+N RR NV ++R SLLI++GNP
Sbjct: 896 SVELFQGKEKHVIIVSFVRS------F--TPKLGFLNNERRLNVLLSRPISLLILIGNPR 947
Query: 803 IVCQ 806
+ Q
Sbjct: 948 TLSQ 951
Score = 37 (18.1 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 127 LQPLRTLTIWLSCKPKEMGLHK 148
++ + L +LS K EM LH+
Sbjct: 353 VEDIERLQHYLSLKQSEMELHQ 374
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 573 (206.8 bits), Expect = 6.1e-54, Sum P(3) = 6.1e-54
Identities = 171/484 (35%), Positives = 259/484 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + +LFP S +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYALDRIK--DNGVLFPDISMTP-TIPWSPNRQWDEQLDPRLNAKQK 647
Query: 407 RSVEIILG--CKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHM 464
+V I C PP +I GP GTGKT TL +A+ + +E SRIL+C SNSAAD
Sbjct: 648 EAVLAITTPLCIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLY 707
Query: 465 LERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRYR 521
++ + V AG + LR+ +R + V ++C S F+ P +E + ++R
Sbjct: 708 IKDYLHPYVEAGNAQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHR 767
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
+++ T +S L ++ G F+HI LDEA QA E E+++P+A L TK T +VLAGD Q
Sbjct: 768 VVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATKNTRIVLAGDHMQ 826
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYG 641
L P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 827 LSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFYE 883
Query: 642 GELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDII 700
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+ +
Sbjct: 884 GKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERV 932
Query: 701 NKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVI 755
+LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V+
Sbjct: 933 EELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVL 992
Query: 756 IVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGNP 801
+STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+P
Sbjct: 993 FLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1052
Query: 802 HIVC 805
+C
Sbjct: 1053 VALC 1056
Score = 49 (22.3 bits), Expect = 6.1e-54, Sum P(3) = 6.1e-54
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L + + +D F ++ + A DS VS+ + N
Sbjct: 279 QTWTFALTCKPARM-LCRVALLYDAHRPHFS-IIAISAGDSTAQVSQEVPENCQEWIGGE 336
Query: 188 KMQSAVDEYV 197
Q+ +D YV
Sbjct: 337 MAQNGLDHYV 346
Score = 39 (18.8 bits), Expect = 6.1e-54, Sum P(3) = 6.1e-54
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEI 469
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 561 (202.5 bits), Expect = 6.2e-54, Sum P(3) = 6.2e-54
Identities = 170/485 (35%), Positives = 260/485 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + +LFP S +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYALDRIK--DNGVLFPDISMTP-TIPWSPNRQWDEQLDPRLNAKQK 647
Query: 407 RSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
+V I L + PP +I GP GTGKT TL +A+ + +E SRIL+C SNSAAD
Sbjct: 648 EAVLAITTPLAIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADL 706
Query: 464 MLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRY 520
++ + V AG + LR+ +R + V ++C S F+ P +E + ++
Sbjct: 707 YIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 766
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L T+ T +VLAGD
Sbjct: 767 RVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHM 825
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 826 QLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFY 882
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 883 EGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 931
Query: 700 INKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREV 754
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V
Sbjct: 932 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 991
Query: 755 IIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGN 800
+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+
Sbjct: 992 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1051
Query: 801 PHIVC 805
P +C
Sbjct: 1052 PIALC 1056
Score = 57 (25.1 bits), Expect = 6.2e-54, Sum P(3) = 6.2e-54
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
Score = 40 (19.1 bits), Expect = 6.2e-54, Sum P(3) = 6.2e-54
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEI 469
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 561 (202.5 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 170/485 (35%), Positives = 260/485 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + +LFP S +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYALDRIK--DNGVLFPDISMTP-TIPWSPNRQWDEQLDPRLNAKQK 647
Query: 407 RSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
+V I L + PP +I GP GTGKT TL +A+ + +E SRIL+C SNSAAD
Sbjct: 648 EAVLAITTPLAIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADL 706
Query: 464 MLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRY 520
++ + V AG + LR+ +R + V ++C S F+ P +E + ++
Sbjct: 707 YIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 766
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L T+ T +VLAGD
Sbjct: 767 RVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHM 825
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 826 QLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFY 882
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 883 EGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 931
Query: 700 INKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREV 754
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V
Sbjct: 932 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 991
Query: 755 IIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGN 800
+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+
Sbjct: 992 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1051
Query: 801 PHIVC 805
P +C
Sbjct: 1052 PIALC 1056
Score = 57 (25.1 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
Score = 40 (19.1 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEI 469
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 560 (202.2 bits), Expect = 2.7e-52, Sum P(3) = 2.7e-52
Identities = 170/485 (35%), Positives = 261/485 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + +LFP +T +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYALDRIK--DNGVLFPD-TTMTPTIPWSPNRQWDEQLDPRLNAKQK 647
Query: 407 RSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
+V I L + PP +I GP GTGKT TL +A+ + +E +RIL+C SNSAAD
Sbjct: 648 EAVLAITTPLSIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQE-TRILICTHSNSAADL 705
Query: 464 MLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRY 520
++ + V AG + LR+ +R + V ++C S F+ P +E + ++
Sbjct: 706 YIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 765
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L TK T +VLAGD
Sbjct: 766 RVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATKNTRIVLAGDHM 824
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 825 QLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFY 881
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 882 EGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 930
Query: 700 INKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREV 754
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V
Sbjct: 931 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 990
Query: 755 IIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGN 800
+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+
Sbjct: 991 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
Query: 801 PHIVC 805
P +C
Sbjct: 1051 PIALC 1055
Score = 57 (25.1 bits), Expect = 2.7e-52, Sum P(3) = 2.7e-52
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
Score = 39 (18.8 bits), Expect = 2.7e-52, Sum P(3) = 2.7e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEI 469
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 557 (201.1 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 169/485 (34%), Positives = 259/485 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + ++LFP S +I +P ++ LN +Q
Sbjct: 579 LQFQLNRLPLCEMHYALDRIK--DNSILFPDVSMTP-TIPWSPNRQWDEQLDPRLNAKQK 635
Query: 407 RSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
+V I L + PP +I GP GTGKT TL +A+ + ++ SRIL+C SNSAAD
Sbjct: 636 EAVLAITTPLSIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADL 694
Query: 464 MLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRY 520
++ + V AG + LR+ +R + V ++C S F+ P +E + +
Sbjct: 695 YIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQ 754
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L K T +VLAGD
Sbjct: 755 RVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LANKNTRIVLAGDHM 813
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 814 QLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFY 870
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 871 EGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 919
Query: 700 INKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREV 754
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V
Sbjct: 920 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVSVERVLNVQGKQFRV 979
Query: 755 IIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGN 800
+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+
Sbjct: 980 LFLSTVRTRHTCKHKQTPIKRKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1039
Query: 801 PHIVC 805
P +C
Sbjct: 1040 PIALC 1044
Score = 59 (25.8 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 267 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQEWIGGK 324
Query: 188 KMQSAVDEYV 197
+Q+ +D Y+
Sbjct: 325 MVQNGIDHYI 334
Score = 39 (18.8 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 426 ADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEI 457
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 558 (201.5 bits), Expect = 5.9e-52, Sum P(3) = 5.9e-52
Identities = 171/499 (34%), Positives = 266/499 (53%)
Query: 338 KEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVP 397
+E + + + + + F NR+ + M+ A+ + + +LFP T +I +P
Sbjct: 577 EELNLRPDHDTQVELQFQLNRLPLCEMHYALDRIK--DNGVLFPD-ITMTPTIPWSPNRQ 633
Query: 398 FNS-----LNEEQTRSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHS 449
++ LN +Q +V I L + PP +I GP GTGKT TL +A+ + +E +
Sbjct: 634 WDEQLDPRLNAKQKEAVLAITTPLSIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQE-T 691
Query: 450 RILVCAASNSAADHMLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE-- 506
RIL+C SNSAAD ++ + V AG + LR+ +R + V ++C
Sbjct: 692 RILICTHSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAH 751
Query: 507 SIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANL 566
S F+ P +E + ++R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L
Sbjct: 752 STFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-L 810
Query: 567 CTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYR 626
TK T +VLAGD QL P +YS+ A L S L+RL+E + + L NYR
Sbjct: 811 ATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYR 867
Query: 627 CHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNP 685
H AI++ S+LFY G+L+A S K +KDF P+ FF +G D +E N+
Sbjct: 868 SHEAIINYTSELFYEGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNST 916
Query: 686 SWFNRFEVSKVVDIINKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVK 740
+++N EV +VV+ + +LR +L++ IGV+TPY QV +I+ L + DV
Sbjct: 917 AFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVN 976
Query: 741 VGTVEQFQGQEREVIIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNV 786
V V QG++ V+ +STVR+ T KH + D T L GFLSN + N
Sbjct: 977 VERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNT 1036
Query: 787 AITRARSLLIIVGNPHIVC 805
AITRA+SL+ +VG+P +C
Sbjct: 1037 AITRAQSLVAVVGDPIALC 1055
Score = 57 (25.1 bits), Expect = 5.9e-52, Sum P(3) = 5.9e-52
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
Score = 39 (18.8 bits), Expect = 5.9e-52, Sum P(3) = 5.9e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEI 469
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 553 (199.7 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 170/486 (34%), Positives = 262/486 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPN-LLFPSQSTKRRSIKAAPFVPFNS-----LNEEQ 405
+ F NR+ + M+ A+ + ++ N +LFP S +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYAL---DRIKDNAVLFPDISMTP-TIPWSPNRQWDEQLDPRLNAKQ 646
Query: 406 TRSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAAD 462
+V I L + PP +I GP GTGKT TL +A + +E +RIL+C SNSAAD
Sbjct: 647 KEAVLAITTPLSIQ-LPPVLIIGPYGTGKTFTLAQAAKHILQQQE-TRILICTHSNSAAD 704
Query: 463 HMLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFE--ESIFKCPPREALGR 519
++ + V AG + LR+ +R + V ++C +S F+ P +E + +
Sbjct: 705 LYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSTQSTFQMPQKEDILK 764
Query: 520 YRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
+R+++ T +S L ++ G F+H+ LDEA QA E E+++P+A L TK T +VLAGD
Sbjct: 765 HRVVVVTLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLA-LATKNTRIVLAGDH 823
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LF
Sbjct: 824 MQLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 640 YGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVD 698
Y G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 881 YEGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVE 929
Query: 699 IINKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQERE 753
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++
Sbjct: 930 RVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFR 989
Query: 754 VIIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVG 799
V+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG
Sbjct: 990 VLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1049
Query: 800 NPHIVC 805
+P +C
Sbjct: 1050 DPVALC 1055
Score = 57 (25.1 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 551 (199.0 bits), Expect = 5.7e-51, Sum P(3) = 5.7e-51
Identities = 169/485 (34%), Positives = 260/485 (53%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + + +LFP S +I +P ++ LN +Q
Sbjct: 591 LQFQLNRLPLCEMHYALDRIK--DNGVLFPDISMTP-TIPWSPNRQWDEQLDPRLNAKQK 647
Query: 407 RSVEII---LGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADH 463
+V I L + PP +I GP GTGKT TL +A+ + +E +RIL+C SNSAAD
Sbjct: 648 EAVLAITTPLAIQ-LPPVLIIGPYGTGKTFTLAQAVKHILQQQE-TRILICTHSNSAADL 705
Query: 464 MLERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPREALGRY 520
++ + V AG + LR+ +R + V ++C S F+ P +E + ++
Sbjct: 706 YIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 765
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++ T +S L ++ G F+HI LDEA QA E E+++P+A L T+ T +VLAGD
Sbjct: 766 RVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHM 824
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P +YS+ A L S L+RL+E + + L NYR H AI++ S+LFY
Sbjct: 825 QLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPCRILLCENYRSHEAIINYTSELFY 881
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G+L+A S K +KDF P+ FF +G D +E N+ +++N EV +VV+
Sbjct: 882 EGKLMA---------SGKQPA--HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 930
Query: 700 INKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREV 754
+ +LR +L++ IGV+TPY QV +I+ L + DV V V QG++ V
Sbjct: 931 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 990
Query: 755 IIVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGN 800
+ +STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+
Sbjct: 991 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
Query: 801 PHIVC 805
P +C
Sbjct: 1051 PIALC 1055
Score = 57 (25.1 bits), Expect = 5.7e-51, Sum P(3) = 5.7e-51
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 131 RTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRSLASNRPYSRVPR 187
+T T L+CKP M L++ + +D F ++ + A DS VS+ + N +
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFS-IIAISAGDSTTQVSQEVPENCQ-EWIGG 335
Query: 188 KM-QSAVDEYV 197
KM Q+ +D YV
Sbjct: 336 KMAQNGLDHYV 346
Score = 40 (19.1 bits), Expect = 5.7e-51, Sum P(3) = 5.7e-51
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 234 ANKILPQFLVE-GLVRKNYFSFFSTLLVMEEL 264
A+++ Q +++ L + NY S LL +EE+
Sbjct: 438 ADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEI 469
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 552 (199.4 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 168/484 (34%), Positives = 256/484 (52%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-----LNEEQT 406
+ F NR+ + M+ A+ + ++LFP S +I +P ++ LN +Q
Sbjct: 584 LQFQLNRLPLCEMHYALDRVR--DNSILFPDISLTP-TIPWSPNRQWDEQLDPRLNAKQK 640
Query: 407 RSVEIILG--CKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHM 464
++ I PP +I GP GTGKT TL +A+ + E SR+L+C SNSAAD
Sbjct: 641 EAILAITTPLSINLPPVLIIGPYGTGKTFTLAQAVKHILKQPE-SRVLICTHSNSAADLY 699
Query: 465 LERLISNEV-AGIKENEILRLNATSRPYEDVPTDFIRFCFFEES--IFKCPPREALGRYR 521
++ + V AG LR+ +R + V ++C + F+ P R+ + R+R
Sbjct: 700 IKDYLHPYVEAGNPHARPLRVYFRNRWVKTVHPLVQQYCLISGAHFTFQMPTRQDVERHR 759
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
+++ T +S L ++ G F+HI LDEA QA E E+++P+A L K T VVLAGD Q
Sbjct: 760 VVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLA-LAVKSTRVVLAGDHMQ 818
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYG 641
L P +YS+ A L S L+RL+E Y + + L NYR H AI++ S LFY
Sbjct: 819 LSPFVYSEFARERNLHVSLLDRLYE--HYPSEYPCRIL-LCENYRSHEAIINYTSDLFYE 875
Query: 642 GELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDII 700
G+L+A S K P+KDF P+ FF +G D +E N+ +++N EV ++V+ +
Sbjct: 876 GKLMA---------SGKQP--PHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERV 924
Query: 701 NKLRENT-----ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVI 755
++R+ +L E IGV++PY QV +I+ L M +V V V QG++ V+
Sbjct: 925 EEMRKKWPVSWGKLEEGSIGVVSPYADQVFRIRAELRKKRMSEVSVERVLNVQGKQFRVL 984
Query: 756 IVSTVRS--TVKHNEF----------DRTYCL--GFLSNPRRFNVAITRARSLLIIVGNP 801
+STVR+ T KH + D T L GFLSN + N AITRA+SL+ +VG+P
Sbjct: 985 FLSTVRTRHTCKHKQTAIKRKEQLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1044
Query: 802 HIVC 805
+C
Sbjct: 1045 IALC 1048
Score = 37 (18.1 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 224 PIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRK 283
P P V S + +FL +GL R Y + ++ EEL E R ++ + ++++
Sbjct: 160 PPPRGVTSSEEYTLCKRFLEQGLCR--YGAQCTSAHSQEELT--EWQRRYASRLIRLKQQ 215
Query: 284 --GAHLLALDVPGLAER 298
G H + L E+
Sbjct: 216 QEGKHFSENYMEALIEK 232
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 536 (193.7 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 159/472 (33%), Positives = 247/472 (52%)
Query: 356 YNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGC 415
+N ++ ++ + A LEP++ P K+ + P N+ E ++ L
Sbjct: 768 HNAVDKITDFRLIFPATELEPSI--PWTPKKQWADSCEP--KLNAKQREAVNAITTALSI 823
Query: 416 KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVA- 474
K PP ++ GP GTGKT TL +AI Q+ T+ ++IL+C SNSAAD ++ + +
Sbjct: 824 K-LPPILLIGPFGTGKTYTLAQAIKQLL-TQPEAKILICTHSNSAADLYIKEYLHPWIEE 881
Query: 475 GIKENEILRLNATSRPYEDVPTDFIRFCFFEE-SIFKCPPREALGRYRIIISTYMSSSLL 533
G+KE LR+ R V ++C + F P E + R+RI++ T S L
Sbjct: 882 GLKEATPLRVYYHKRWSATVNGVVQKYCITDGVGNFLRPTVEDIMRHRIVVVTLSISMEL 941
Query: 534 NTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
T G+ +G F+HIFLDEA QA E E+++P+A L T +VLAGD Q+ P ++S A+
Sbjct: 942 ATLGLPKGLFTHIFLDEAAQAMECEAIMPLA-LANDSTRIVLAGDHMQMSPELFSAFAKE 1000
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
L S LERL++ Y + + L NYR H AI+ S+LFY +L+A S
Sbjct: 1001 RKLHISLLERLYD--HYPSNFPCKIL-LCENYRAHEAIIRFTSELFYEQKLVA------S 1051
Query: 654 LSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENT-----E 708
+ D F +P+ FF +G D ++ N+ +++N EV +VV+ +++LR+ +
Sbjct: 1052 GKQPRHDRF----YPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGK 1107
Query: 709 LNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVR------- 761
LN+T IG++TPY QV +I+ L M + V V QG++ + +STVR
Sbjct: 1108 LNDTSIGIMTPYSDQVFRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMP 1167
Query: 762 --------STVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
ST + D Y GFLSN + N AITRA+SL+ +VG+P +C
Sbjct: 1168 QGSAPGSASTTSIGDADADY--GFLSNSKLLNTAITRAQSLVAVVGDPVALC 1217
Score = 41 (19.5 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 94 NSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDR 125
+S+ +S E P K DP K + E IED+
Sbjct: 697 SSVYISKPEDPDSKADPTK-RAVYEAL-IEDK 726
Score = 41 (19.5 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 220 LPEFPIPNDVRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEEL-RLEEDMR 271
L +P P +L + + + L + NY S LL +EE+ R E+ R
Sbjct: 590 LERYPCPRAATFTLTQSTIVE---KRLTQNNYRSRIHELLSVEEIARYEQIAR 639
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 386 (140.9 bits), Expect = 8.1e-46, Sum P(2) = 8.1e-46
Identities = 109/301 (36%), Positives = 166/301 (55%)
Query: 400 SLNEEQTRSV-EIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN 458
SLN Q R+V I+ G PYV++GPPG+GKTMTL+E +LQ+ +RILV SN
Sbjct: 783 SLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSN 842
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEE--SIFKCPPR-- 514
S+AD + +RLI ++ A ++ + I ++ + +P + + +C + ++ C +
Sbjct: 843 SSADLVTKRLIDSK-ALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMM 901
Query: 515 --EA----------LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIP 562
E+ +G +RI IST + G G+F+H+ DEAGQ +EPE+M+P
Sbjct: 902 VTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVP 961
Query: 563 IANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNG------DEG 616
I L K++ VVL+GDP+QL ++ S+ A G S+LERL E YR G
Sbjct: 962 IVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSG 1021
Query: 617 Y----VTKLVRNYRCHPAILDLPSKLFYGGEL---LACKDDATSLSSAKVD-IFPN-KDF 667
Y +TKL+ NYR P+I+ + S+LFY EL L+ KD S +K+ +F + KD
Sbjct: 1022 YNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDI 1081
Query: 668 P 668
P
Sbjct: 1082 P 1082
Score = 346 (126.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 80/197 (40%), Positives = 126/197 (63%)
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGEL---LACKDDATSLSSAKVD-IFPN-KDFP---- 668
+TKL+ NYR P+I+ + S+LFY EL L+ KD S +K+ +F + KD P
Sbjct: 1027 LTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHG 1086
Query: 669 VLFFGIQGCDEREGNNPSWFNRFEVSKV-VDIINKLRENTELNETDIGVITPYRQQVLKI 727
F+GI G + + ++PSWFN EV +V + I R N ++ IG+ITPY++QV +
Sbjct: 1087 TFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ--IGIITPYQKQVKML 1144
Query: 728 KKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVA 787
+ + D+ K+G+VE+FQGQER++I++STVRS+ + D + LGF+ +R NVA
Sbjct: 1145 RSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVA 1204
Query: 788 ITRARSLLIIVGNPHIV 804
++RAR+++II GNPH++
Sbjct: 1205 VSRARAMMIIFGNPHLL 1221
Score = 183 (69.5 bits), Expect = 8.1e-46, Sum P(2) = 8.1e-46
Identities = 51/155 (32%), Positives = 80/155 (51%)
Query: 241 FLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRP 300
FL E L K Y F LL +EE+ + R + + R G L L + LAERRP
Sbjct: 606 FLTEPLSIKTYMHRFRLLLHLEEIECFVNFRNYDRDRAHFLRDG-EFLTLQIENLAERRP 664
Query: 301 SLVHGDFVFVKLAAANADAK-----KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFT 355
SLV GD + V ++ D++ +G I++V D ++LKF F ++ NG Y + F
Sbjct: 665 SLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKY-NGEDYRLEFY 723
Query: 356 YNRINMRRMYQAVQAAEN-LEPNLLFPSQSTKRRS 389
++R + R+ + A+ + + LFPS+ TKR +
Sbjct: 724 FSRYSFRKQHHAISKIVGVMGEDFLFPSKVTKREN 758
Score = 39 (18.8 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 331 EVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAV 368
E+ + F E HTQ ++ ++ + +RR++ +
Sbjct: 476 EITVTF--EIHTQFLGEAIEKYVLNFDLLKVRRVFTVI 511
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 498 (180.4 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 119/337 (35%), Positives = 198/337 (58%)
Query: 478 ENEILRLNATS---RPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLN 534
+++++R+ + S + + VP+ ++ +SI+ + +Y II++T + + L
Sbjct: 402 DHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVARLV 461
Query: 535 TNGIKRGNF-SHIFLDEAGQASEPESMIPIANLCTKQTV---VVLAGDPKQLGPVIYSKD 590
T+ + R NF +HIF+DEAG ++EPE++I I + KQT V+L+GD KQLG VI S
Sbjct: 462 TDTLGRYNFFTHIFIDEAGASTEPEALIGIMGI--KQTADCHVILSGDHKQLGAVIKSNR 519
Query: 591 AETFGLGKSYLERLFECEFYR---NG--DEGYVTKLVRNYRCHPAILDLPSKLFYGGELL 645
A + GL +S +ERL + + Y+ NG D +L RNYR HP I+ L ++L+Y GEL
Sbjct: 520 AASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELK 579
Query: 646 ACKDDATSLS-SAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLR 704
A + A ++ +A + N FP++F G RE N+ S +N E + + +L
Sbjct: 580 A-QAPAMDVNLAANWSVLTNPQFPIIFQATHGVTNREQNSTSSYNNLEAEVICWYVKRLI 638
Query: 705 ENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
+ + + D+G++ PY Q + K+L++ P+V+VG+VE +QG+E+ +II S V+S
Sbjct: 639 NDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTIIIASLVKSFT 698
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
+GF+ NPRR NV ++RA++LLI+VGNP
Sbjct: 699 N---------MGFMCNPRRVNVLLSRAKALLILVGNP 726
Score = 178 (67.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 54/159 (33%), Positives = 87/159 (54%)
Query: 402 NEEQTRSVE-IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
N EQ +V+ I+ G PY+++GPPGTGKT T+VEAILQ+ + SRILV A SNSA
Sbjct: 312 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSA 371
Query: 461 AD----HMLERLISN-----EVAGIK----ENEILRLNATS---RPYEDVPTDFIRFCFF 504
D + E + SN A K +++++R+ + S + + VP+ ++
Sbjct: 372 CDTIALKLCEYIESNIRLQEHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNC 431
Query: 505 EESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNF 543
+SI+ + +Y II++T + + L T+ + R NF
Sbjct: 432 SKSIYDHIKASRIVKYGIIVATLCTVARLVTDTLGRYNF 470
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 455 (165.2 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 144/457 (31%), Positives = 231/457 (50%)
Query: 381 PSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAIL 440
P ++T + AP +P LN Q +++ +L P +I GPPGTGKT+T I
Sbjct: 435 PMRTTMPKKF-TAPGLP--DLNGSQISAIKAVLS---TPLSLIQGPPGTGKTVTSATIIY 488
Query: 441 QVYSTREHSRILVCAASNSAADHMLERL-----------------ISNEVAGIKENEILR 483
+ + S++LVCA SN A D + ER+ + + V+ + +E +R
Sbjct: 489 HL-AKMNGSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVR 547
Query: 484 LNATS---RPYEDVPTDFIRFCFFEESIFK----CPPREALGRYRIIISTYMSSSLLNTN 536
+N T+ + + ++ +E FK RE L ++ T + +
Sbjct: 548 MNDTNPELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILSNADVVCCTCVGAGDPRLA 607
Query: 537 GIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGL 596
+K F ++ +DE+ Q++EPE MIP+ C KQ VVL GD KQLGPVI +K A GL
Sbjct: 608 KLK---FRNVLIDESTQSAEPECMIPLVLGC-KQ--VVLVGDHKQLGPVIMNKKAAKAGL 661
Query: 597 GKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSS 656
+S ERL + +L YR HP + + PS +FY G L ++ T
Sbjct: 662 NQSLFERLVKLGLTP-------IRLNVQYRMHPCLSEFPSNMFYEGSL---QNGVTIQQR 711
Query: 657 AKVDI---FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETD 713
+ D+ +P D P++F+ G +E + S+ NR E S V ++ + + + D
Sbjct: 712 LRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFK-AGVKPGD 770
Query: 714 IGVITPYRQQVLKIKKVLE---TW---DMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHN 767
IGV+TPY Q I ++ T+ +V+V +V+ FQG+E++ I++S VRS N
Sbjct: 771 IGVVTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRS----N 826
Query: 768 EFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
E + +GFLS+PRR NVA+TRA+ ++I+GNP ++
Sbjct: 827 E---SQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVL 860
Score = 44 (20.5 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 315 ANA---DAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNR 358
ANA D +K E V+LK+ +H Q+ G L + Y++
Sbjct: 249 ANATVDDLEKNEQIDDEPHPVLLKYDDPYHYQNIFGPLVKMESDYDK 295
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 297 (109.6 bits), Expect = 4.4e-38, Sum P(2) = 4.4e-38
Identities = 92/282 (32%), Positives = 142/282 (50%)
Query: 523 IISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQL 582
+I T ++ +L T + F + +DE QA E I + K + +LAGD QL
Sbjct: 345 VILTTLTGAL--TRKLDNRTFDLVIIDEGAQALEVACWIALL----KGSRCILAGDHLQL 398
Query: 583 GPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGG 642
P I S +AE GLG++ ERL + Y GDE + L YR H I++ SK Y
Sbjct: 399 PPTIQSAEAERKGLGRTLFERL--ADLY--GDE-IKSMLTVQYRMHELIMNWSSKELYDN 453
Query: 643 ELLACKDDATSL--SSAKVDIFPNKDFPVLFFGIQGCD--EREGNNPSWFNRFEVSKVVD 698
++ A A+ + V + + +L GCD E++ S +N E +
Sbjct: 454 KITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMA 513
Query: 699 IINKLRENTELNETDIGVITPYRQQVLKIKKVLETWD--MPDVKVGTVEQFQGQEREVII 756
+L E+ + +DIG+ITPY QV+ ++ +L + + D+++ TV+ FQG+E+E II
Sbjct: 514 HAKRLMESG-VQPSDIGIITPYAAQVMLLR-ILRGKEEKLKDMEISTVDGFQGREKEAII 571
Query: 757 VSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
+S VRS K +GFL + RR NVA+TR+R IV
Sbjct: 572 ISMVRSNSKKE-------VGFLKDQRRMNVAVTRSRRQCCIV 606
Score = 192 (72.6 bits), Expect = 4.4e-38, Sum P(2) = 4.4e-38
Identities = 61/193 (31%), Positives = 101/193 (52%)
Query: 306 DFVFVKLAAANADAK---KGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMR 362
D V +KL ++ + +G +YR++ + + F E + N SL + N + R
Sbjct: 85 DVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVF-DEVPEEGLNTSL-RLEKLANEVTYR 142
Query: 363 RMYQA-VQA--------AENLEPNLLFPSQ-STKRRSIKAAPFVPFN-SLNEEQTRSVEI 411
RM +Q A +L P L Q S ++ +K+ F PFN +L++ Q ++
Sbjct: 143 RMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKS--FTPFNKNLDQSQKDAITK 200
Query: 412 ILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISN 471
L K ++++GPPGTGKT T+VE +LQ + S+IL CAASN A D+++ERL+ +
Sbjct: 201 ALSSKDV--FLLHGPPGTGKTTTVVEIVLQ--EVKRGSKILACAASNIAVDNIVERLVPH 256
Query: 472 EVAGIKENEILRL 484
+V ++ RL
Sbjct: 257 KVKLVRVGHPARL 269
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 442 (160.7 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 147/471 (31%), Positives = 227/471 (48%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEI 411
V F + + R +QAV A E L+ P T P P N +Q +V
Sbjct: 716 VQFQVDPLTFRFWHQAVDALP--EERLVVPDLPTCNLP-HPLPIPPAMQGNRKQKLAVAF 772
Query: 412 ILGCK-GA--P--PYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLE 466
I G G P P +IYGP GTGKT TL A L+V + H+++L+C +NSAAD +E
Sbjct: 773 IAGSSPGGRRPIAPLLIYGPFGTGKTYTLAMASLEVIR-QPHTKVLICTHTNSAADIYIE 831
Query: 467 RLISNEVA-GIKENEILRLNATSRPYEDVPTDFIRFCFFEES--IFKCPPREALGRYRII 523
V+ G E LR+ T RP +++C + F+ P R L ++RI+
Sbjct: 832 EHFHGYVSSGHPEAAPLRVMYTDRPPSQTDATVLQYCCLTQDRRAFRAPTRAELEQHRIV 891
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLG 583
++T + L + G FSHI +DEA Q E E++ P+ T VVLAGD Q+
Sbjct: 892 VTTTSQARELR---VPAGFFSHILIDEAAQMLECEALTPL-RYAAPGTRVVLAGDHMQVT 947
Query: 584 PVIYSKDAETFGLGKSYLERLFECEFYRNGDE-GYVTKLV--RNYRCHPAILDLPSKLFY 640
P ++S G + L RLF+ + R E ++L+ +NYR AIL S+ FY
Sbjct: 948 PRLFSVPRAQ-AAGHTLLYRLFQ-HYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFY 1005
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDII 700
K +S +V P P++F + G ER+ ++ SW N EV++VV+ +
Sbjct: 1006 -----VAKGSPIH-ASGRVPPHPRLH-PLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQV 1058
Query: 701 NKLRENTEL-----NETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVI 755
L + + I V++ + QV +++ L ++ V VG+ E G+E V+
Sbjct: 1059 RDLHDGWPSCWGAREQKHICVVS-HGAQVTALRQELRKRNLGQVSVGSFEILPGREFRVV 1117
Query: 756 IVSTVRSTVKHNEFDR-TYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
++STV + H+ T LGF ++ R N +TRA+S ++ VGN +C
Sbjct: 1118 VLSTVHN--HHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALC 1166
Score = 289 (106.8 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 91/301 (30%), Positives = 150/301 (49%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
L ++R+I+ T S + +++ + I +DEAG A+EPE++IP+ +K VVL
Sbjct: 2601 LDQHRVILCT---CSCAASASLRKLDVRQILIDEAGMATEPETLIPLVAF-SKAEKVVLL 2656
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GD KQL PV+ ++ + GL +S ER + + + L YR H I PS
Sbjct: 2657 GDHKQLRPVVKNEQLQNLGLDRSLFER-YHVDAHM---------LDTQYRMHEGICAFPS 2706
Query: 637 KLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDER------EGNNPSWFNR 690
FY +L + + + + V+F +QG ++ EGN S N
Sbjct: 2707 MEFYEKKLKTWQ--GLRRPPSILGHIGKESCSVIFGHVQGHEQSLLVSTDEGNENSKANP 2764
Query: 691 FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
EV+ VV I +L + D+ ++TPY Q +I K L + V V ++ + QG
Sbjct: 2765 EEVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREGVSGVTVCSITKSQGS 2824
Query: 751 EREVIIVSTVRSTVKHNEFD----RTYC---LGFLSNPRRFNVAITRARSLLIIVGNPHI 803
E ++VSTVR T + ++ D +++ LGF+ +P + NVAITRAR L ++G+ +
Sbjct: 2825 EWRYVLVSTVR-TCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDHRL 2883
Query: 804 V 804
+
Sbjct: 2884 L 2884
Score = 69 (29.3 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
++LN Q R+V L + VI GPPGTGKT+ + + + E
Sbjct: 2421 HTLNRSQNRAVRAALKKQFT---VIQGPPGTGKTVVAFHIVFWFHKSNE 2466
Score = 52 (23.4 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 92 PANSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDRVLQPL 130
P+ +L + P S PD DQGFL G ++ ++ P+
Sbjct: 634 PSGALFAEVPSPSSLLPDT--DQGFLLGRAVSTALVAPV 670
Score = 39 (18.8 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 398 FNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAIL 440
F+ NEEQT + + + P ++Y P + K++ ++ +L
Sbjct: 2461 FHKSNEEQTGACDTPREKQLGGPCILYCGP-SNKSVDVLAGLL 2502
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 428 (155.7 bits), Expect = 8.9e-37, P = 8.9e-37
Identities = 148/441 (33%), Positives = 216/441 (48%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN QT +V +L P +I GPPGTGKT+T I + S +ILVCA SN A
Sbjct: 441 LNVSQTNAVRTVLQ---RPLSLIQGPPGTGKTVTSATIIYHL-SKLNKQKILVCAPSNVA 496
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREAL--- 517
DH+ +L ++ G+ ++RL A SR + + S K ++ +
Sbjct: 497 VDHLAAKL---DLLGLN---VVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLK 550
Query: 518 ---GRYRII-ISTYMSSS------LLNT-------------NGIKRGNFSHIFLDEAGQA 554
G + + Y+ S +LN + + F + +DE+ QA
Sbjct: 551 NQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQA 610
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGD 614
SEPE +IPI KQ V+L GD +QLGPVI K A GL +S ERL F
Sbjct: 611 SEPEVLIPIVK-GAKQ--VILVGDHQQLGPVILDKKAADAGLKQSLFERLV---FL---- 660
Query: 615 EGYVT-KLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG 673
G+V +L YR HP + + PS +FY G L L +P D P++F+
Sbjct: 661 -GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQ---VLKIKKV 730
G +E + S+ NR E V II KL ++ + IGVITPY Q +++ V
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFKDG-IKPEQIGVITPYEGQRAYLVQFMSV 778
Query: 731 LETW-DMPD----VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFN 785
T D D V++ +V+ FQG+E++ II+S VR+ N+ + +GFLS+PRR N
Sbjct: 779 NSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRA----ND---SQSIGFLSDPRRLN 831
Query: 786 VAITRARSLLIIVGNPHIVCQ 806
VA+TRA+ L+I+GNP +C+
Sbjct: 832 VALTRAKYGLVILGNPRSLCR 852
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 428 (155.7 bits), Expect = 8.9e-37, P = 8.9e-37
Identities = 148/441 (33%), Positives = 216/441 (48%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN QT +V +L P +I GPPGTGKT+T I + S +ILVCA SN A
Sbjct: 441 LNVSQTNAVRTVLQ---RPLSLIQGPPGTGKTVTSATIIYHL-SKLNKQKILVCAPSNVA 496
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREAL--- 517
DH+ +L ++ G+ ++RL A SR + + S K ++ +
Sbjct: 497 VDHLAAKL---DLLGLN---VVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLK 550
Query: 518 ---GRYRII-ISTYMSSS------LLNT-------------NGIKRGNFSHIFLDEAGQA 554
G + + Y+ S +LN + + F + +DE+ QA
Sbjct: 551 NQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQA 610
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGD 614
SEPE +IPI KQ V+L GD +QLGPVI K A GL +S ERL F
Sbjct: 611 SEPEVLIPIVK-GAKQ--VILVGDHQQLGPVILDKKAADAGLKQSLFERLV---FL---- 660
Query: 615 EGYVT-KLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG 673
G+V +L YR HP + + PS +FY G L L +P D P++F+
Sbjct: 661 -GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQ---VLKIKKV 730
G +E + S+ NR E V II KL ++ + IGVITPY Q +++ V
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFKDG-IKPEQIGVITPYEGQRAYLVQFMSV 778
Query: 731 LETW-DMPD----VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFN 785
T D D V++ +V+ FQG+E++ II+S VR+ N+ + +GFLS+PRR N
Sbjct: 779 NSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRA----ND---SQSIGFLSDPRRLN 831
Query: 786 VAITRARSLLIIVGNPHIVCQ 806
VA+TRA+ L+I+GNP +C+
Sbjct: 832 VALTRAKYGLVILGNPRSLCR 852
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 431 (156.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 121/328 (36%), Positives = 183/328 (55%)
Query: 500 RFCFFEE--SIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEP 557
++C S F+ P +E + ++R+++ T +S L ++ G F+HI LDEA QA E
Sbjct: 748 QYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMEC 807
Query: 558 ESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY 617
E+++P+A L T+ T VVLAGD QL P +YS+ A L S L+RL+E + +
Sbjct: 808 ETIMPLA-LATRHTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYE---HYPAEFPC 863
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQG 676
L NYR H AI++ S+LFY G+L+A S K +K+F P+ FF +G
Sbjct: 864 RILLCENYRSHEAIINYTSELFYEGKLMA---------SGKQPA--HKEFYPLTFFTARG 912
Query: 677 CDEREGNNPSWFNRFEVSKVVDIINKLRENT-----ELNETDIGVITPYRQQVLKIKKVL 731
D +E N+ +++N EV +VV+ + +LR +L++ IGV+TPY QV +I+ L
Sbjct: 913 EDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAEL 972
Query: 732 ETWDMPDVKVGTVEQFQGQEREVIIVSTVRS--TVKHNEF----------DRTYCL--GF 777
+ DV V V QG++ V+ +STVR+ T KH + D T L GF
Sbjct: 973 RKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGF 1032
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIVC 805
LSN + N AITRA+SL+ +VG+P +C
Sbjct: 1033 LSNYKLLNTAITRAQSLVAVVGDPIALC 1060
Score = 50 (22.7 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 119 GFSIEDRVLQPLRTLTIWLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDS---VSRS 175
G S+ + +T T L+CKP M L + + +D F ++ + A DS VS+
Sbjct: 267 GLSVTVNTKKSHQTWTFALTCKPARM-LCRVALLYDAHRPHFS-IIAISAGDSTTQVSQE 324
Query: 176 LASNRPYSRVPRKMQ-SAVDEYV 197
+ N + KM + +D YV
Sbjct: 325 VPENCQ-EWIGGKMAPNGLDHYV 346
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 422 (153.6 bits), Expect = 3.2e-36, P = 3.2e-36
Identities = 150/472 (31%), Positives = 228/472 (48%)
Query: 373 NLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKT 432
++ P+ L P K S + P +P LN Q+ +V +L P +I GPPGTGKT
Sbjct: 371 DIPPSFLKP----KLPSDLSVPNLP--KLNASQSEAVRAVLS---KPLSLIQGPPGTGKT 421
Query: 433 MTLVEAI-----LQVYSTREHSRILVCAASNSAADHMLERLISN-----EVAGIKENEI- 481
+T + +Q + HS +LVCA SN A D + E++ VA +I
Sbjct: 422 VTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIE 481
Query: 482 -----LRLNATSRPYEDVP---------TDFIRFCFFEES----IFKCPPREALGRYRII 523
L L+ + Y+ P ++ +E + +E L +I
Sbjct: 482 SSVSFLSLHEQIKNYKFNPELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVI 541
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLG 583
T + + I + F + +DEA QASEPE MIP+ L KQ VVL GD +QLG
Sbjct: 542 CCTCVGAG---DRRISKYKFRSVLIDEATQASEPECMIPLV-LGAKQ--VVLVGDHQQLG 595
Query: 584 PVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGE 643
PV+ +K L +S ERL G+ + +LV YR HP + + PS FY G
Sbjct: 596 PVVMNKKVALASLSQSLFERLIIL-----GNSPF--RLVVQYRMHPCLSEFPSNTFYEGT 648
Query: 644 LLACKDDATSLSSAK-VDIFP--NKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDII 700
L TS A+ VD FP D P++F+ G +E + S+ NR E S I+
Sbjct: 649 LQ--NGVTTSERIARHVD-FPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIV 705
Query: 701 NKLRENTELNETDIGVITPYRQQVLKIKKVLET-----WDM-PDVKVGTVEQFQGQEREV 754
+ L E IG++TPY Q I + ++ D+ V+V +V+ FQG+E++
Sbjct: 706 TTFLRSNVLPE-QIGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDF 764
Query: 755 IIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
II+S VRS+ +H +GF+++PRR NVA+TRA+ +I++GNP ++ +
Sbjct: 765 IILSCVRSS-EHQG------IGFVNDPRRLNVALTRAKYGVIVLGNPKVLAK 809
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 422 (153.6 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 145/458 (31%), Positives = 223/458 (48%)
Query: 382 SQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQ 441
+Q K+ S+ P LN Q +V+ +L P +I GPPGTGKT+T I
Sbjct: 410 TQMPKKFSVPGLP-----ELNGSQINAVKSVLQ---RPLSLIQGPPGTGKTVTSATIIYH 461
Query: 442 VYSTREHSRILVCAASNSAADHMLERL-----------------ISNEVAGIKENEILRL 484
+ + ++LVCA SN A D + ER+ + + V + +E +RL
Sbjct: 462 L-AKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRL 520
Query: 485 NATSRPY---EDVPTDFIRFCFFEESIFK----CPPREALGRYRIIISTYMSSSLLNTNG 537
N ++ + ++ +E K RE L +I T + +
Sbjct: 521 NDSNIELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAK 580
Query: 538 IKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLG 597
+K F + +DE+ Q++EPE MIP+ C KQ VVL GD +QLGPVI +K A GL
Sbjct: 581 LK---FRTVLIDESTQSAEPECMIPLVLGC-KQ--VVLVGDHQQLGPVIMNKKAAKAGLN 634
Query: 598 KSYLERL--FECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLS 655
+S ERL C R L YR HP + + PS +FY G L ++ TS
Sbjct: 635 QSLFERLVILGCSPIR---------LNVQYRMHPCLSEFPSNMFYEGSL---QNGITSFD 682
Query: 656 SAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNET 712
+ VD +P D P++F+ G +E + S+ NR E + V I+ + + +
Sbjct: 683 RLRREVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFK-AGVQPK 741
Query: 713 DIGVITPY---RQQVLKIKKVLETWDMP---DVKVGTVEQFQGQEREVIIVSTVRSTVKH 766
DIG+ITPY R ++ + T+ +++V +V+ FQG+E++ II+S VRS H
Sbjct: 742 DIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSN-DH 800
Query: 767 NEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
+GFLS+PRR NVA+TRA+ L+I+GNP ++
Sbjct: 801 QG------IGFLSDPRRLNVALTRAKYGLVILGNPKVL 832
Score = 47 (21.6 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 314 AANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNR 358
A AD +K + E V+L++ F Q+ G L + Y+R
Sbjct: 223 ATIADLEKATAVDDEPAPVLLRYDDAFQYQNIFGPLVKIEADYDR 267
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 426 (155.0 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 136/468 (29%), Positives = 220/468 (47%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEI 411
V F + + R +QAV E L+ P T + P N +Q +V +
Sbjct: 469 VQFQIDPMTFRLWHQAVDTLP--EEQLVVPDLPTCALP-RPWSVPPLRRGNRKQELAVAL 525
Query: 412 ILGC-----KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLE 466
I G + PP +IYGP GTGKT TL A L+V R +++L+C +NSAAD +
Sbjct: 526 IAGWGPGDGRRVPPLLIYGPFGTGKTYTLAMASLEVIR-RPETKVLICTHTNSAADIYIR 584
Query: 467 RLISNEVAG-IKENEILRLNATSRPYEDVPTDFIRFCFF--EESIFKCPPREALGRYRII 523
+ V+G E LR+ T RP +++C + F+ P R L R+R++
Sbjct: 585 EYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVV 644
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLG 583
++T + L + G FSHI +DEA Q E E++ P+A + T +VLAGD Q+
Sbjct: 645 VTTTSQARELR---VPVGFFSHILIDEAAQMLECEALTPLA-YASHGTRLVLAGDHMQVT 700
Query: 584 PVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLV--RNYRCHPAILDLPSKLFYG 641
P ++S A + L RLF C + ++LV NYRC AI+ S+ FY
Sbjct: 701 PRLFSV-ARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFY- 758
Query: 642 GELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIIN 701
K + + KV P + +P++F + G +R+ + SW N E+++VV+ +
Sbjct: 759 ----VAKGNPIH-ARGKVPPHP-RHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQ 812
Query: 702 KLRENTEL----NETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIV 757
+ E + + QV +++ L D+ V VG+ E G++ V+++
Sbjct: 813 EAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVL 872
Query: 758 STVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
STV T + F ++ R N +TRA+S L++VG+ +C
Sbjct: 873 STVH-TCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALC 919
Score = 300 (110.7 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 94/301 (31%), Positives = 151/301 (50%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
L R+ +I+ T S + +K + I +DEAG A+EPE++IP+ + VV+L
Sbjct: 2331 LDRHEVILCT---CSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLL- 2386
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GD KQL PV+ ++ + GL +S ER E + ++ L YR H I PS
Sbjct: 2387 GDHKQLRPVVKNERLQNLGLDRSLFERYHE--------DAHM--LDTQYRMHEGICAFPS 2436
Query: 637 KLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDER------EGNNPSWFNR 690
FY +L + + + + PV+F +QG + EGN S N
Sbjct: 2437 VAFYKSKLKTWQ--GLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 2494
Query: 691 FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
EV++VV I +L + DI V+TPY Q +I K L + V V ++ + QG
Sbjct: 2495 EEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGS 2554
Query: 751 EREVIIVSTVRSTVKHNEFD----RTYC---LGFLSNPRRFNVAITRARSLLIIVGNPHI 803
E ++VSTVR+ K ++ D +++ LGF+ +P + NVA+TRA+ L ++G+ H+
Sbjct: 2555 EWRYVLVSTVRTCAK-SDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGD-HL 2612
Query: 804 V 804
+
Sbjct: 2613 L 2613
Score = 58 (25.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTRE 447
+ LN Q +V L P VI GPPGTGKT+ + + + + +
Sbjct: 2151 HKLNPSQNVAVREALE---KPFTVIQGPPGTGKTIVGLHIVFWFHKSNQ 2196
Score = 49 (22.3 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 92 PANSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDRVLQPL 130
P +L + P S PD DQGFL G ++ ++ P+
Sbjct: 387 PPGALYAEVPVPSSLMPDT--DQGFLLGRAVSTALVAPV 423
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 426 (155.0 bits), Expect = 4.3e-35, Sum P(2) = 4.3e-35
Identities = 147/484 (30%), Positives = 240/484 (49%)
Query: 339 EFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPF 398
E + + + + F +++ R+ +QAV L+ L+ P ++ SI P
Sbjct: 456 ELNLKPKTSHNVEIQFQIDQLLFRQWHQAVDRL--LDERLVLPDVASC--SIPFCLQEPQ 511
Query: 399 NSLNEEQTRSVEIILGC----KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVC 454
N +Q ++ I G + PP +IYGP GTGKT TL A L+V + ++R+L+C
Sbjct: 512 IG-NSKQKLAISFIAGQATSRRQVPPLLIYGPFGTGKTFTLAMATLEVIR-QPNTRVLIC 569
Query: 455 AASNSAADHMLERLISNEVAGIKENEI-LRLNATSRPYEDV-PTDFIRFCFFEES-IFKC 511
+NSAAD + V + LR+ AT RP PT + C ++ F+
Sbjct: 570 THTNSAADIYIREYFHKYVTNGHPWAVPLRIIATDRPINLTDPTTQMYCCLTKDQRSFRH 629
Query: 512 PPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQT 571
P RE + ++ III+T M S L + G F+HI +DEA Q E E++IP++ T +T
Sbjct: 630 PTREEIDKHPIIITTSMLSKHLK---VAPGYFTHIMIDEAAQMLECEALIPLS-YATFET 685
Query: 572 VVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTK--LV--RNYRC 627
+VLAGD Q+ P ++ A+ + L RLF+ FY+ K ++ NYR
Sbjct: 686 RIVLAGDHMQITPKLFCV-ADGQSAYHTLLNRLFQ--FYQKEKHEVAMKSRIIFNENYRS 742
Query: 628 HPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKD-FPVLFFGIQGCDEREGNNPS 686
I++ SK FY G K +A S +I P+ + +P++F + G ER+ + S
Sbjct: 743 TAGIIEFVSKHFYIG-----KGNAIHASG---NIPPHPEIYPLMFCHVPGVAERDMSMIS 794
Query: 687 WFNRFEVSKVVDIINKLRENT--ELNETD---IGVITPYRQQVLKIKKVLETWDMPDVKV 741
W N E+++VV+ + ++ + E D I V++ + QV I++ L +P+V V
Sbjct: 795 WHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-HGVQVSAIRQELRKKQLPEVVV 853
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
E G+E VII+STV T + ++ F + R N +TRA+S +I+VG+
Sbjct: 854 ENYENLPGREFRVIIISTVH-TSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDA 912
Query: 802 HIVC 805
+C
Sbjct: 913 VALC 916
Score = 289 (106.8 bits), Expect = 8.3e-21, Sum P(5) = 8.3e-21
Identities = 92/301 (30%), Positives = 151/301 (50%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
L + +I+ T S+S +++ N I +DE ++EPE++IP+ + + VV+L
Sbjct: 2247 LACHDVILCTCSSAS---AGSLEKLNVKQILIDECAMSTEPETLIPLVSHKHAEKVVLL- 2302
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GD KQL PV+ + ++ G+ S ER Y+ + ++ L YR H I + PS
Sbjct: 2303 GDHKQLKPVVNNDFCKSLGMETSLFER------YQK--QAWM--LDTQYRMHKNICEFPS 2352
Query: 637 KLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDE------REGNNPSWFNR 690
+ FY L C + S N+ P++F ++G ++ EGN S N
Sbjct: 2353 QEFYEHRLKTCPQ-LLRIPSVLYHK-NNRCCPIIFGHVEGKEQSLVISTEEGNENSKANP 2410
Query: 691 FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
EV + V +L + + I +++PY QV +I K L + V V T+ + QG
Sbjct: 2411 EEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVSEINKRLLKEGIRGVTVCTIMKSQGS 2470
Query: 751 EREVIIVSTVRSTVKHNEFDRTYC-------LGFLSNPRRFNVAITRARSLLIIVGNPHI 803
E +I+STVRS +H E D+ LGF+++P + NVAITRA+ L I+GN ++
Sbjct: 2471 EWRYVILSTVRSCSRH-EIDKKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGNRYL 2529
Query: 804 V 804
+
Sbjct: 2530 L 2530
Score = 62 (26.9 bits), Expect = 8.3e-21, Sum P(5) = 8.3e-21
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 385 TKRRSIKAAPF-VPFNS--LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQ 441
TK + ++ F +P + LN Q ++V L P +I GPPGTGKT+ +
Sbjct: 2049 TKSKILQQKSFDLPGSQRKLNPSQNKAV---LNALTKPFTLIQGPPGTGKTVVGTHIVYW 2105
Query: 442 VYSTREHS 449
+ E +
Sbjct: 2106 FHKLNEEA 2113
Score = 47 (21.6 bits), Expect = 4.3e-35, Sum P(2) = 4.3e-35
Identities = 24/106 (22%), Positives = 43/106 (40%)
Query: 2 SNLEKDCWDDECSVTGEK--REI--GFIDFQDDHSVLSYDPSGEGPVIISVPFPFVQGKP 57
SN E W +V +K R I G + +QD + Y +IIS +V+G
Sbjct: 106 SNEELQEWIQRVNVAAKKKKRAIKEGLVSYQD-RLIAEYQTCSNEVLIIS---EYVEGI- 160
Query: 58 QSILVGETSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEP 103
+++ E + + + + W ++Y +P + L EP
Sbjct: 161 -TVVCQEP----LDVHSEDRQLKYRWKFKVYSQKPLQHVALLKREP 201
Score = 46 (21.3 bits), Expect = 8.3e-21, Sum P(5) = 8.3e-21
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 292 VPGLAERR---P--SLVHGDFVFVKLAAANADAKKGSIYRVE 328
VPGL E+ P LV+G + V N D ++ I+ V+
Sbjct: 1145 VPGLKEKPNVIPIRKLVNGKYKVVSCKKINQDTRRCQIFSVQ 1186
Score = 39 (18.8 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 287 LLALDVPGLAERRPSLV 303
L+ VPG+AER S++
Sbjct: 777 LMFCHVPGVAERDMSMI 793
Score = 38 (18.4 bits), Expect = 8.3e-21, Sum P(5) = 8.3e-21
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 229 VRESLANKILPQFLVEGLV----RKNYFSFFSTLLVMEELRL 266
+R+ L K LP+ +VE R+ ST+ E LR+
Sbjct: 839 IRQELRKKQLPEVVVENYENLPGREFRVIIISTVHTSESLRV 880
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 343 (125.8 bits), Expect = 6.0e-35, Sum P(3) = 6.0e-35
Identities = 104/293 (35%), Positives = 151/293 (51%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
++ + +I+ST +S + GI NF + +DE QA E IPI K +
Sbjct: 391 QQVINDSNVILSTNTGASDSSLKGID--NFDWVVIDECAQALEASCWIPIQ----KGNKL 444
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVR-NYRCHPAIL 632
+LAGD +QL P I+S +A GL + ER+ + + GD+ V++L+ YR + I+
Sbjct: 445 LLAGDHQQLPPTIHSMEAAKMGLSITLFERIIK----QYGDQ--VSRLLNVQYRMNHKIM 498
Query: 633 DLPSKLFYGGELLACKDDATSL----SSAKVDIFPNKDFPVLFFGIQGCDEREGNNP--- 685
D S FY +++A K + L S K+ P+L GCD E +
Sbjct: 499 DWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSGCDMEESQDDEGE 558
Query: 686 SWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVE 745
S FN EV V I KL E + DIGVITPY QV +K L +++GTV+
Sbjct: 559 SKFNNGEVIVVKRHIEKLIE-CGVKPNDIGVITPYNGQVKLLKSYLSK-KYSSMEIGTVD 616
Query: 746 QFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
FQG+E++VII+S VRS D + +GFL+ RR NVAITRAR +++V
Sbjct: 617 GFQGREKDVIIISMVRSNT-----DAPHKVGFLTEDRRTNVAITRARKHVVVV 664
Score = 123 (48.4 bits), Expect = 6.0e-35, Sum P(3) = 6.0e-35
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++ L I+GPPGTGKT T+VE I+Q+ + + ++L C SN +
Sbjct: 235 LNQSQKEAILFSLSSNDVA--CIHGPPGTGKTTTVVEFIVQLIKSGK--KVLACGPSNLS 290
Query: 461 ADHMLERLI 469
D+MLE+L+
Sbjct: 291 VDNMLEKLL 299
Score = 44 (20.5 bits), Expect = 6.0e-35, Sum P(3) = 6.0e-35
Identities = 9/46 (19%), Positives = 23/46 (50%)
Query: 304 HGDFVFVKLAAANADAK---KGSIYRVEADEVILKFAKEFHTQHRN 346
+GD V ++ + + KG +Y+V++ ++++ F + N
Sbjct: 106 NGDIVGIRPSKSKPGTNHYFKGVVYKVDSRKIVIAFDDNYEDSDPN 151
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 419 (152.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 142/452 (31%), Positives = 220/452 (48%)
Query: 392 AAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRI 451
+AP +P LN Q +V+ L P +I GPPGTGKT+T + Q+ + +
Sbjct: 445 SAPHLP--DLNRSQVYAVKHALQ---RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGT-V 498
Query: 452 LVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDF------IRFCFFE 505
LVCA SN+A D + E++ + +++R+ A SR D P F IR
Sbjct: 499 LVCAPSNTAVDQLTEKIHRTNL------KVVRVCAKSREAIDSPVSFLALHNQIRNMETN 552
Query: 506 ESIFKCPP-REALG--------RYRIIISTYMSSSLLNT------------NG-IKRGNF 543
+ K ++ G RYR + + LL +G + R F
Sbjct: 553 SELKKLQQLKDETGELSSADEKRYRNL-KRAAENQLLEAADVICCTCVGAGDGRLSRVKF 611
Query: 544 SHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLER 603
+ I +DE+ Q++EPE M+P+ L KQ ++L GD QLGPV+ K A GL +S ER
Sbjct: 612 TSILIDESMQSTEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAARAGLSQSLFER 668
Query: 604 LFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELL--ACKDDATSLSSAKVDI 661
L G + +L YR HP + PS FY G L C +D K+D
Sbjct: 669 LVVL-----GIRPF--RLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR----LKLDF 717
Query: 662 -FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPY 720
+P + P+ F QG +E G+ S+ NR E + V I + + + IG+ITPY
Sbjct: 718 PWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLK-AGIKPEQIGIITPY 776
Query: 721 RQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYC 774
Q ++ + L + ++++ +V+ FQG+E+++II+S VRS +
Sbjct: 777 EGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQG------- 829
Query: 775 LGFLSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
+GFL++PRR NVA+TRA+ +IIVGNP ++ +
Sbjct: 830 IGFLNDPRRLNVALTRAKFGIIIVGNPKVLAK 861
Score = 46 (21.3 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 160 FERMVLLLAEDSVSRSLASNRPYSRV 185
F+RM L + ++ R+ SN YSR+
Sbjct: 397 FDRMTRALCKFAIDRNSVSNFIYSRL 422
Score = 38 (18.4 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + T + E ID + H +L Y+
Sbjct: 240 NKLEELWKENIEATFQDLEKPGIDSEPAHVLLRYE 274
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 322 (118.4 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 100/304 (32%), Positives = 159/304 (52%)
Query: 521 RIIISTYMSSSLLNTNGIKRGN-----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVL 575
RI+++T SS + R + F + +DE QA EP+ IP+ + +VL
Sbjct: 362 RIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVL 421
Query: 576 AGDPKQLGPVIYSKDAETF--GLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
AGD KQL P I ++D + L + +R+ + + D V L YR + I++
Sbjct: 422 AGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIK--IFPKRD--MVKFLNVQYRMNQKIME 477
Query: 634 LPSKLFYGGELLACKDDATSL--SSAKVDIFPNKD-----FPVLFFGIQGCDEREGNNP- 685
PS Y G+LLA A L VD P++D P++++ QG + +E +
Sbjct: 478 FPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETADEA 537
Query: 686 ----SWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVL-ETWDMPDVK 740
S +N E++ V + I LR + + E IGVI+PY QV +KK++ + + D++
Sbjct: 538 TILGSKYNEGEIAIVKEHIENLR-SFNVPENSIGVISPYNAQVSHLKKLIHDELKLTDIE 596
Query: 741 VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+ TV+ FQG+E++VII+S VRS K F+ +GFL RR NVA+TR R L++VGN
Sbjct: 597 ISTVDGFQGREKDVIILSLVRSNEK---FE----VGFLKEERRLNVAMTRPRRQLVVVGN 649
Query: 801 PHIV 804
++
Sbjct: 650 IEVL 653
Score = 133 (51.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 355 TYNRIN--MRRMYQAVQAAENLEPNLL-----FPSQSTKRRSIKAAPFVPFNSLNEEQTR 407
TYNR+ MR++ + ++ L F + ++IK+ F+ N LN+ Q
Sbjct: 158 TYNRMESTMRKLSEISSPIQDKIIQYLVNERPFIPNTNSFQNIKS--FLNPN-LNDSQKT 214
Query: 408 SVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLER 467
++ + +I+GPPGTGKT TL+E I Q+ RIL+C SN + D +LER
Sbjct: 215 AINFAINNDLT---IIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILER 271
Query: 468 LISNEVAGIKENEILRLNATSR 489
L + N +LR+ +R
Sbjct: 272 LTPL----VPNNLLLRIGHPAR 289
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 412 (150.1 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 143/457 (31%), Positives = 218/457 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 451 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 502
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 503 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 561
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 562 NQIRNMDSMP-ELQKLQQLKDETGELSSADEK-RYRALKRTAERELLMNADVICCTCVGA 619
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 620 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 676
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L ++ T+
Sbjct: 677 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTA 726
Query: 654 LSSAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELN 710
K D +P D P+ F+ QG +E + S+ NR E + V I KL +
Sbjct: 727 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAK 785
Query: 711 ETDIGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+
Sbjct: 786 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA-- 843
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
NE +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 844 --NEHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 875
Score = 42 (19.8 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 262 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 296
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 412 (150.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 143/457 (31%), Positives = 218/457 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 461 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 512
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 513 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 571
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 572 NQIRNMDSMP-ELQKLQQLKDETGELSSADEK-RYRALKRTAERELLMNADVICCTCVGA 629
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 630 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 686
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L ++ T+
Sbjct: 687 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTA 736
Query: 654 LSSAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELN 710
K D +P D P+ F+ QG +E + S+ NR E + V I KL +
Sbjct: 737 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAK 795
Query: 711 ETDIGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+
Sbjct: 796 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA-- 853
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
NE +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 854 --NEHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 885
Score = 42 (19.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 261 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 295
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 412 (150.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 143/457 (31%), Positives = 218/457 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 462 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 513
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 514 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 572
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 573 NQIRNMDSMP-ELQKLQQLKDETGELSSADEK-RYRALKRTAERELLMNADVICCTCVGA 630
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 631 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 687
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L ++ T+
Sbjct: 688 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTA 737
Query: 654 LSSAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELN 710
K D +P D P+ F+ QG +E + S+ NR E + V I KL +
Sbjct: 738 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAK 796
Query: 711 ETDIGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+
Sbjct: 797 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA-- 854
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
NE +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 855 --NEHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 886
Score = 42 (19.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 262 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 296
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 412 (150.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 143/457 (31%), Positives = 218/457 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 463 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 514
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 515 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 573
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 574 NQIRNMDSMP-ELQKLQQLKDETGELSSADEK-RYRALKRTAERELLMNADVICCTCVGA 631
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 632 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 688
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L ++ T+
Sbjct: 689 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTA 738
Query: 654 LSSAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELN 710
K D +P D P+ F+ QG +E + S+ NR E + V I KL +
Sbjct: 739 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAK 797
Query: 711 ETDIGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+
Sbjct: 798 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA-- 855
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
NE +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 856 --NEHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 887
Score = 42 (19.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 263 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 297
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 412 (150.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 143/457 (31%), Positives = 218/457 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 464 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 515
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 516 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 574
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 575 NQIRNMDSMP-ELQKLQQLKDETGELSSADEK-RYRALKRTAERELLMNADVICCTCVGA 632
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 633 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 689
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L ++ T+
Sbjct: 690 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTA 739
Query: 654 LSSAK--VDI-FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELN 710
K D +P D P+ F+ QG +E + S+ NR E + V I KL +
Sbjct: 740 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAK 798
Query: 711 ETDIGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+
Sbjct: 799 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA-- 856
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
NE +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 857 --NEHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 888
Score = 42 (19.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 264 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 298
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 411 (149.7 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 139/433 (32%), Positives = 209/433 (48%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN Q +V+ +L P +I GPPGTGKT+T + + + + + +LVCA SN A
Sbjct: 477 LNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNIA 532
Query: 461 ADHMLERLISNEVAGI----KENE-------ILRLNATSRPYEDVPTDFIRFCFFEESIF 509
D + E++ + + K E L L+ R + +P + + ++
Sbjct: 533 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMP-ELQKLQQLKDETG 591
Query: 510 KCPPREALGRYRIIISTYMSSSLLNTNGI------------KRGNFSHIFLDEAGQASEP 557
+ + RYR + T L+N + I + F I +DE+ QA+EP
Sbjct: 592 ELSSADEK-RYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEP 650
Query: 558 ESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGY 617
E M+P+ L KQ ++L GD QLGPV+ K A GL +S ERL
Sbjct: 651 ECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRP------ 701
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAK--VDI-FPNKDFPVLFFGI 674
+L YR HPA+ PS +FY G L ++ T+ K D +P D P+ F+
Sbjct: 702 -IRLQVQYRMHPALSAFPSNIFYEGSL---QNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQ------VLKIK 728
QG +E + S+ NR E + V I KL + IG+ITPY Q ++
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAKPDQIGIITPYEGQRSYLVQYMQFS 816
Query: 729 KVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAI 788
L T +V++ +V+ FQG+E++ II+S VR+ NE +GFL++PRR NVA+
Sbjct: 817 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA----NEHQG---IGFLNDPRRLNVAL 869
Query: 789 TRARSLLIIVGNP 801
TRAR +IIVGNP
Sbjct: 870 TRARYGVIIVGNP 882
Score = 42 (19.8 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + S T E E +D + H +L Y+
Sbjct: 258 NKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 292
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 352 (129.0 bits), Expect = 8.2e-34, Sum P(2) = 8.2e-34
Identities = 99/270 (36%), Positives = 143/270 (52%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F HI +DE+ QASEPE +IP+ + KQ V+L GD +QLGPV+ K GL +S E
Sbjct: 700 FPHILIDESTQASEPECLIPLM-MGAKQ--VILVGDHRQLGPVLLCKKVVDAGLSQSLFE 756
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
RL + +L YR HP++ + PS Y G+L++ S +K +
Sbjct: 757 RLISLGHHPE-------RLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFP-W 808
Query: 663 PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQ 722
P P+ FF G +E + S+ N E S I+ K E L IG+ITPY
Sbjct: 809 PQPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSL-PGQIGIITPYEG 867
Query: 723 Q-------VLKIKKV-LETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYC 774
Q + K K+ LE + ++V +V+ FQG+E++ II+S VRS N++
Sbjct: 868 QRAYITSHMQKSGKLNLELYK--SIEVASVDSFQGREKDYIILSCVRS----NDYQG--- 918
Query: 775 LGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
+GFL +PRR NVA+TRAR LII+GN ++
Sbjct: 919 IGFLQDPRRLNVALTRARFGLIILGNAKVL 948
Score = 105 (42.0 bits), Expect = 8.2e-34, Sum P(2) = 8.2e-34
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQ--VYSTREHSRILVCAASN 458
LNE Q +V +L AP +I GPPGTGKT+ + I+ V + + ++LVC SN
Sbjct: 537 LNESQISAVNKVLT---APLSLIQGPPGTGKTV-ISSFIIHHLVKYVKGNDKVLVCTPSN 592
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFI 499
A D + +L +E+ G+K ++RL++ R P + +
Sbjct: 593 VAIDQLTGKL--HEI-GLK---VVRLSSKLREEVASPVEHL 627
Score = 50 (22.7 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 23/100 (23%), Positives = 40/100 (40%)
Query: 148 KSVVQFDIGDDRFERMVLLLAEDSVSRSLASNRPYSRVPRKMQSAVDEYVXXXXXXXXXX 207
KS FD G RM ++ S R L++ + ++ + + S + Y
Sbjct: 461 KSRCSFDSGPKGSYRMEMVWRSTSSERILSAMKSFAIKEQALSSYL--YHALLGHPDIPP 518
Query: 208 XXXXXXXGSNYKLPEFPIPNDVRESLANKIL--PQFLVEG 245
+N+ L P N+ + S NK+L P L++G
Sbjct: 519 APLDIQLPTNFHLKNLPRLNESQISAVNKVLTAPLSLIQG 558
Score = 42 (19.8 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 142 KEMGLHKSVVQFD-IGDDRFERMVLLLAEDSVSRSLASNRPYSRVPRKMQSAV 193
+ + LHK V + D +GD ++ L E S S + Y + R M+ A+
Sbjct: 625 EHLTLHKQVYKLDQMGDGELGKL-RKLKEAFGSLSNEDEKRYIYLRRMMEMAI 676
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 409 (149.0 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 141/454 (31%), Positives = 214/454 (47%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV 436
+++ Q KR + + P LN Q +V+ +L P +I GPPGTGKT+T
Sbjct: 432 DVIIKCQLPKRFTAQGLP-----DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSA 483
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI----KENE-------ILRLN 485
+ + + + + +LVCA SN A D + E++ + + K E L L+
Sbjct: 484 TIVYHL-ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 542
Query: 486 ATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI------- 538
R + +P + + ++ + + RYR + T L+N + I
Sbjct: 543 NQIRNMDSMP-ELQKLQQLKDETGELSSSDEK-RYRALKRTAERELLMNADVICCTCVGA 600
Query: 539 -----KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+ F I +DE+ QA+EPE M+P+ L KQ ++L GD QLGPV+ K A
Sbjct: 601 GDPRLAKMQFRSILIDESTQATEPECMVPVV-LGAKQ--LILVGDHCQLGPVVMCKKAAK 657
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATS 653
GL +S ERL +L YR HPA+ PS +FY G L A
Sbjct: 658 AGLSQSLFERLVVLGIRP-------IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR 710
Query: 654 LSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETD 713
L +P D P+ F+ QG +E + S+ NR E + V I +L +
Sbjct: 711 LKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLK-AGAKPDQ 769
Query: 714 IGVITPYRQQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHN 767
IG+ITPY Q ++ L T +V++ +V+ FQG+E++ II+S VR+ N
Sbjct: 770 IGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA----N 825
Query: 768 EFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
E +GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 826 EHQG---IGFLNDPRRLNVALTRARYGVIIVGNP 856
Score = 39 (18.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 3 NLEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYD 37
N ++ W + + T E E +D + H +L Y+
Sbjct: 242 NKLEELWKENPTATLEDLEKPGVDEEPQHVLLRYE 276
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 408 (148.7 bits), Expect = 9.5e-33, Sum P(2) = 9.5e-33
Identities = 125/406 (30%), Positives = 204/406 (50%)
Query: 414 GCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEV 473
G K PP +IYGP GTGKT TL A L+V + H+++L+C +NSAAD + V
Sbjct: 778 GSKHIPPLLIYGPFGTGKTYTLAMAALEVVQ-QPHTKVLICTHTNSAADIYVREYFHGYV 836
Query: 474 -AGIKENEILRLNATSRPYEDVPTDFIRFCFFEES--IFKCPPREALGRYRIIISTYMSS 530
+G +E LR+ RP + +++C E F+ P L R+R++++T +
Sbjct: 837 NSGHQEAAPLRVMYADRPPRQTDSTTLQYCCLTEDRQAFRPPTFPELLRHRLVVTTTSQA 896
Query: 531 SLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD 590
L + G FSHIF+DEA Q E E++IP++ T T VVLAGD Q+ P ++S
Sbjct: 897 RELQ---VPAGFFSHIFIDEAAQMLECEALIPLSYALTL-TRVVLAGDHMQVTPRLFSVP 952
Query: 591 AETFGLGKSYLERLF---ECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLAC 647
+ G L RLF + E ++ + NYR AI++ S+ FY
Sbjct: 953 RDK-AAGHMLLHRLFLYYQQEVHKIAQHSRIV-FHENYRSTAAIINFVSRHFY-----VA 1005
Query: 648 KDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENT 707
K + +S KV P + +P++F + G E++ + SW N EV++VV+ + ++ NT
Sbjct: 1006 KGNPIQ-ASGKVPRHP-QHYPLMFCHVAGSPEQDMSRTSWLNSAEVTQVVEKVQEIY-NT 1062
Query: 708 ------ELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVR 761
+ I ++ + QV +++ L ++ +V VG+ E G+E V+++S+V
Sbjct: 1063 WPHCWGPREQRHICAVS-HGAQVSALRQELRRRNLGEVSVGSFEILPGREFRVVVLSSVH 1121
Query: 762 STVKHNEF--DRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
+ N F + PR N +TRA+S L+ VG+ +C
Sbjct: 1122 N---RNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALC 1164
Score = 336 (123.3 bits), Expect = 7.2e-25, Sum P(4) = 7.2e-25
Identities = 101/302 (33%), Positives = 157/302 (51%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTV-VVL 575
L R+ +I+ T S + +K N I +DEAG A+EPE++IP+ +C +T VVL
Sbjct: 2626 LERHSVILCT---CSCAASGSLKALNVRQILIDEAGMATEPETLIPL--VCFSKTEKVVL 2680
Query: 576 AGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLP 635
GD KQL PV+ ++ G+ +S ER ++R+ L YR H I P
Sbjct: 2681 LGDHKQLRPVVKNEQLRNLGMDRSLFER-----YHRDA-----IMLDTQYRMHKDICSFP 2730
Query: 636 SKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDER------EGNNPSWFN 689
S FYGG+L D + + + PV+F +QG +++ EGN S N
Sbjct: 2731 SMEFYGGKLKTWSD--LKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRAN 2788
Query: 690 RFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQG 749
EV++VV II +L + ++ D+ V+TPY Q I + L + V V ++ + QG
Sbjct: 2789 PEEVTEVVRIIKQLTLDRTVDPKDVAVLTPYNAQAAAISRGLMQRGVTGVTVTSITKSQG 2848
Query: 750 QEREVIIVSTVRSTVKHNEFD----RTYC---LGFLSNPRRFNVAITRARSLLIIVGNPH 802
E +IVSTVR T ++ D +++ LGF+ +P + NVAITRA+ L I+G+ H
Sbjct: 2849 SEWRYVIVSTVR-TCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIGD-H 2906
Query: 803 IV 804
++
Sbjct: 2907 LL 2908
Score = 60 (26.2 bits), Expect = 7.2e-25, Sum P(4) = 7.2e-25
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTM 433
+ LN+ Q ++V L + VI GPPGTGKT+
Sbjct: 2445 HKLNQSQDKAVRSALQKQFT---VIQGPPGTGKTV 2476
Score = 45 (20.9 bits), Expect = 9.5e-33, Sum P(2) = 9.5e-33
Identities = 28/128 (21%), Positives = 53/128 (41%)
Query: 4 LEKDCWDDECSVTGEKREIGFIDFQDDHSVLSYDPSGEGPVIISV-PFPFVQGKPQSILV 62
LE D W E K ++ + + H+V+ + P + F + + Q LV
Sbjct: 548 LEVD-WTPEQEALMAKYKLPSLALEFSHNVVVWGPISRTNYRQRMHKFLYEEEAAQQQLV 606
Query: 63 GETS-KCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDPQKDQGFLEGFS 121
+ + K ++++ P G+ ++ P +L + P S PD DQGFL +
Sbjct: 607 AKLAMKGQVSLKTALETPA--LGM-LFA--PPGALYAEVPFPSSLLPDT--DQGFLMSRA 659
Query: 122 IEDRVLQP 129
+ ++ P
Sbjct: 660 VSTALVAP 667
Score = 40 (19.1 bits), Expect = 7.9e-23, Sum P(4) = 7.9e-23
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 215 GSNYKLPEFPIPNDVRESLANKI 237
G + EFP+P SL KI
Sbjct: 2541 GEQAEATEFPLPGVSNRSLFGKI 2563
Score = 37 (18.1 bits), Expect = 7.2e-25, Sum P(4) = 7.2e-25
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 151 VQFDIGDDRFERMVLLLAEDSVSRSLA 177
VQ G + +MV L+A + + SLA
Sbjct: 1836 VQLAAGTRDYSQMVDLIATEDMHPSLA 1862
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 309 (113.8 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 92/269 (34%), Positives = 142/269 (52%)
Query: 546 IFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLF 605
+ +DE+ QA+EPE ++ I +Q +VL GD QLGPV+ K A GL +S ERL
Sbjct: 607 VLIDESTQATEPEILVSIMR-GVRQ--LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLV 663
Query: 606 ECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELL-ACKDDATSLSSAKVDI-FP 663
G + +L YR HP + + PS +FY G L ++ ++ VD +P
Sbjct: 664 LL-----GIRPF--RLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTG--VDWHWP 714
Query: 664 NKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQ 723
+ P F+ G +E + S+ NR E + V +++KL + + IGVIT Y Q
Sbjct: 715 KPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIK-AGVQPHQIGVITSYEGQ 773
Query: 724 VLKIKKVLETWDM------PDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
I + T +V++ +V+ FQG+E++ IIV+ VRS N+ +GF
Sbjct: 774 RSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRS----NDI---LGIGF 826
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
LS+PRR NVAITRA+ L++VGN ++ +
Sbjct: 827 LSDPRRLNVAITRAKYGLVLVGNAKVLAR 855
Score = 130 (50.8 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 57/231 (24%), Positives = 100/231 (43%)
Query: 292 VPGLAERRPSLVHGDFVFVKLAAA--NAD-AKKGSIYRV---EADEVILKFAKEFHTQHR 345
+P A+ L GD + +K + ++ K GS++++ DEV ++
Sbjct: 319 LPQFADGVMKLAKGDELRLKHSQTVDGSEWTKIGSVFKIPDNHGDEVGIEIRGAVDKSVM 378
Query: 346 NGSL-YNVSFTYNRINMRRMYQAVQAAEN----LEPNLL-----FPSQST-------KRR 388
+ + V +N R Y+A+ A N + P L P++ +R
Sbjct: 379 ESRIMFTVDVVWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRL 438
Query: 389 SIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREH 448
S+ P LN Q ++V+ +L P +I GPPGTGKT+ + + E
Sbjct: 439 SVAGLP-----ELNSSQMQAVKQVLT---RPLSLIQGPPGTGKTVVSATIVYHLVQKTE- 489
Query: 449 SRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFI 499
+LVC+ SN A DH+ E++ G+K ++RL A SR + + ++
Sbjct: 490 GNVLVCSPSNIAVDHLAEKI---HKTGLK---VVRLCARSREHSETTVPYL 534
Score = 42 (19.8 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 440 LQVYSTREHSRI----LVCAASNSAADHMLERLISNEV 473
+Q+ +EH + ++C +SAAD L ++ + V
Sbjct: 570 MQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTV 607
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 386 (140.9 bits), Expect = 5.3e-32, P = 5.3e-32
Identities = 137/447 (30%), Positives = 219/447 (48%)
Query: 394 PFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILV 453
P +P LN Q +V+ +L P +I GPPGTGKT+T AI+ + + ++LV
Sbjct: 484 PGLP--ELNASQVNAVKSVLQ---KPISLIQGPPGTGKTVTSA-AIVYHMAKQGQGQVLV 537
Query: 454 CAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDF-IRFCFFEE------ 506
CA SN A D + E++ + + ++ R A S P E + + +R E
Sbjct: 538 CAPSNVAVDQLAEKISATGLKVVRLCAKSR-EAVSSPVEYLTLHYQVRHLDTSEKSELHK 596
Query: 507 --------------------SIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHI 546
++ + RE +I T + ++ L + + F +
Sbjct: 597 LQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFR---FRQV 653
Query: 547 FLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFE 606
+DE+ QA+EPE +IP+ L KQ VVL GD QLGPVI K A GL +S ERL
Sbjct: 654 LIDESTQATEPECLIPLV-LGVKQ--VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVT 710
Query: 607 CEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLS--SAKVDI-FP 663
G + +L YR HPA+ + PS FY G L ++ T + + +D +P
Sbjct: 711 L-----GIKPI--RLQVQYRMHPALSEFPSNSFYEGTL---QNGVTIIERQTTGIDFPWP 760
Query: 664 NKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYR-Q 722
+ P+ F+ G +E + S+ NR E + V ++ ++ + + IGVITPY Q
Sbjct: 761 VPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVV-PSQIGVITPYEGQ 819
Query: 723 QVLKIKKVLETWDM-----PDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
+ + + + +++V +V+ FQG+E++ II+S VRS NE +GF
Sbjct: 820 RAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRS----NEHQG---IGF 872
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIV 804
L++PRR NVA+TRAR ++I+GNP ++
Sbjct: 873 LNDPRRLNVALTRARYGIVILGNPKVL 899
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 402 (146.6 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 141/475 (29%), Positives = 233/475 (49%)
Query: 352 VSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEI 411
V F NR++ +++QA+ +L N+L P S + + LN +Q ++
Sbjct: 487 VQFQLNRLSFCQIHQAIDRLPDLH-NVL-PDFSNCCVPVN---LTKQSQLNNKQQIALNF 541
Query: 412 ILG-C---KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAAD-HMLE 466
ILG C K A P +IYGP GTGKT+ L A ++ + R +++L+C +NS+AD ++ E
Sbjct: 542 ILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKEL-AHRSQNKVLICTYTNSSADLYVRE 600
Query: 467 RLISNEVAGIKENEILRLNATSRPYEDVPTDFI--RFCFFEES--IFKCPPREALGRYRI 522
+ G ++LR+ A + TD I ++C F P R L +RI
Sbjct: 601 HFHPYIINGHPTLKLLRIKANKGGSAIIATDDITRKYCLCSRDGQSFILPARSDLESHRI 660
Query: 523 IISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQL 582
II+T + L+ + +G F+HI +DEA Q E E+++ + L K T VVLAGD Q+
Sbjct: 661 IITTTSIARHLHELKLPKGFFTHILIDEASQMLEGEALMALG-LADKHTRVVLAGDHMQM 719
Query: 583 GPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTK--LV--RNYRCHPAILDLPSKL 638
P ++S + + L RLF +Y++ K ++ NYR I+D S
Sbjct: 720 APKLFSVTDDKRS-EHTLLNRLFH--YYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTY 776
Query: 639 FYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQG-CDEREG-NNPSWFNRFEVSK 695
FY + + A+ D+ P+ P++F ++G C + SW N EV+
Sbjct: 777 FYVSDGI----------KARGDVHPHPRLKPLIFHHVRGECHLSSTITSTSWLNYAEVNS 826
Query: 696 VVDIINKLREN--TELNETD---IGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
VV+++ L + E + D I V++ QQV I+ L V V + QG+
Sbjct: 827 VVNMVQVLLTDWPMEWGDKDPKQICVLSE-GQQVAAIRIHLRRKGFYGVSVQNLANIQGK 885
Query: 751 EREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
+ VII++TV + K + D + C F + R N A+TRA+SL++++G+ +C
Sbjct: 886 QFRVIIITTVHTRDKLLQLDSS-CPEFFDDIRALNTALTRAQSLVVVIGDAGALC 939
Score = 266 (98.7 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 92/330 (27%), Positives = 153/330 (46%)
Query: 488 SRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIF 547
S PY TD + + + L R+ II+ T +++ N K + I
Sbjct: 2441 SDPYSLTDTDIEEY----KKLLNDARLHELERHDIILCTCTAAASPNLK--KTLSARQIL 2494
Query: 548 LDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFEC 607
+DE A+EP++++P+ + K VVL GD KQL P++ + G+ +S ER
Sbjct: 2495 IDECAMATEPQTLVPLVSF--KPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYM-- 2550
Query: 608 EFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF 667
D + L YR H I PS+ +Y L + TS+ +A+ + +
Sbjct: 2551 ------DRAIM--LDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLNAETE-GRRQSK 2601
Query: 668 PVLFFGIQG------CDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYR 721
+LF I+G GN S N EV K V+I +L + DI +++PY
Sbjct: 2602 RILFGDIRGEEIGLVVSTARGNENSKANFDEVKKAVEICIQLVTVGRVRPEDIAILSPYN 2661
Query: 722 QQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFD----RTYC--- 774
QV +I++ L +++ V T+ + QG E + +I+S VRS +E + R +
Sbjct: 2662 AQVAQIRERLSDFELKGFTVTTITKSQGSEWQYVILSIVRSCPS-DEIEPMPSREWLSKH 2720
Query: 775 LGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
+GF+ + + NV ITRA+ L I+GN ++
Sbjct: 2721 IGFVGDENQINVGITRAQVGLCILGNQAVL 2750
Score = 71 (30.1 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT---LVEAILQVYS---------TREH 448
LNE Q +++E L K +I GPPGTGKT+ +V Q+ S T +
Sbjct: 2290 LNESQFKALEKALNGKFT---IIQGPPGTGKTVVGAYIVYWFSQLNSRNLWRLKDPTDKD 2346
Query: 449 SR--ILVCAASNSAADHMLERLI 469
R IL C SN + D + E L+
Sbjct: 2347 KREVILYCGPSNKSVDVVAEYLL 2369
Score = 39 (18.8 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 142 KEMGLHKSVVQFDIGDDRFERMVLLLAEDSVSRSLASNRP--YSRVPRKMQSAVDEYV 197
KEM + S Q D+ +R + AE + N+P Y R M+ Y+
Sbjct: 1005 KEMENYDSDAQKSDDDNEQKRRIFTSAEKENLLEMVRNQPALYKRGELVMEGYQSGYI 1062
Score = 37 (18.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 63 GETSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLM 101
G S +++NT P + G + S+ L++S +
Sbjct: 214 GAVFSLSDSLRNTIPPITHIAGHELRSSQSTYQLSVSFL 252
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 344 (126.2 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 130/387 (33%), Positives = 196/387 (50%)
Query: 442 VYSTREHS-RILVCAASNSAADHMLERLISN----EVAGIKENEILRLNATSR-PYEDVP 495
V ++R++ R+LVCA SNSA D ++ RL+S+ E A +I+R+ + V
Sbjct: 367 VNASRKYRLRVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIGLKAHHSVASVS 426
Query: 496 TDFIRFCFFEESIFKCPPREALG------RYRIIISTYMSSSLLNTNG---IKRGN--FS 544
D + +I K P + G R I+ + + L+ +G + + N F
Sbjct: 427 LDHLVAQKRGSAIDK-PKQGTTGTDIDSIRTAILEEAAIVFATLSFSGSALLAKSNRGFD 485
Query: 545 HIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERL 604
+ +DEA QA EP ++IP+A C KQ V L GDPKQL + S A+ G G S ERL
Sbjct: 486 VVIIDEAAQAVEPATLIPLATRC-KQ--VFLVGDPKQLPATVISTVAQDSGYGTSMFERL 542
Query: 605 FECEFYRNGDEGYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV-DIF 662
+ GY K+++ YR HP I PSK FY G L +D + + + D
Sbjct: 543 QKA--------GYPVKMLKTQYRMHPEIRSFPSKQFYEGAL----EDGSDIEAQTTRDWH 590
Query: 663 PNKDF-PVLFFGI-QGCDERE-GNNPSWFNRFEVSKVVDIINKL-RENTEL-NETDIGVI 717
+ F P FF I +G + + G S N EV V+ I ++L EL + + + +I
Sbjct: 591 KYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAII 650
Query: 718 TPYRQQVL----KIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTY 773
+PY QV + K++ T V + TV+ FQG+E++V I S VR+ NE +
Sbjct: 651 SPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRA----NENGQ-- 704
Query: 774 CLGFLSNPRRFNVAITRARSLLIIVGN 800
+GFLSN RR NV ITRA+S +++VG+
Sbjct: 705 -IGFLSNSRRMNVGITRAKSSVLVVGS 730
Score = 78 (32.5 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 398 FN-SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVE---AILQVYSTREHSR 450
FN +LN+ Q ++++ L K +I GPPGTGKT T++ AI+ R S+
Sbjct: 254 FNENLNKSQKEAIDVGLSRKSF--VLIQGPPGTGKTQTILSILGAIMHATPARVQSK 308
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 261 (96.9 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 89/261 (34%), Positives = 125/261 (47%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F + +DE QA E IP+ K +LAGD KQL P I S A GL S +E
Sbjct: 365 FDLVVIDECAQALEASCWIPLL----KAPKCILAGDHKQLPPTIISHKAAAKGLSLSLME 420
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
R+ E R G++ V L YR H AI+ S YGG L A A L +
Sbjct: 421 RVIE----RYGEK-VVKMLTVQYRMHEAIMQWASSEMYGGRLTAHPSVAQHLLKDLPGVT 475
Query: 663 PNKD--FPVLFFGIQGCD--ERE-GNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVI 717
++ P+L GC E E + S N EV V I L + + D+ V+
Sbjct: 476 CTEETTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLVGLHIQALVD-AGVKARDVAVV 534
Query: 718 TPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
PY QV +++ L P++++ +V+ FQG+E+E +I+S VRS K +GF
Sbjct: 535 APYNLQVDMLREHL-CHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGE-------VGF 586
Query: 778 LSNPRRFNVAITRARSLLIIV 798
L+ RR NVA+TRAR + I+
Sbjct: 587 LAEDRRINVAVTRARRHVAII 607
Score = 165 (63.1 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 67/207 (32%), Positives = 101/207 (48%)
Query: 305 GDFVFVKLAAANADA-KKGSIYRVEADEVILKFAK--------EFHTQHRNGSLYNVSFT 355
GD V + + D G I RV + V + F + + + +R L N T
Sbjct: 82 GDIVGLYDSVGQGDLLSTGIITRVTSKAVTVAFEESRDGMLSVDHESSYRLLKLAN-DIT 140
Query: 356 YNRI----NMRRMYQAVQAAENLEPNLLF---PSQSTKRRSIKAAPFVPFN-SLNEEQTR 407
YNRI N + Y A++ ++ L F PS S++ + +K +N SL+ Q
Sbjct: 141 YNRIKKALNTLKQYHGGPASDLIDV-LFFSLDPSPSSETKPLKL-----YNDSLDASQRE 194
Query: 408 SVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLER 467
+V L K +++GPPGTGKT T+VE ILQ + ++ ++L CA SN A D+++ER
Sbjct: 195 AVSFSLAQKELA--IVHGPPGTGKTTTVVEIILQ--AVQQGLKVLCCAPSNVAVDNLVER 250
Query: 468 LISNEVAGIKENEILRLNATSRPYEDV 494
L AG K ILRL +R E +
Sbjct: 251 L-----AGYKAR-ILRLGHPARLLEPI 271
Score = 42 (19.8 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLALDV 292
RL E ++ HS++ V R A ++A DV
Sbjct: 266 RLLEPIQQHSLDAVLARSDSAQIVA-DV 292
Score = 41 (19.5 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 47 SVPFPFVQGKPQSILVGE--TSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPP 104
+V F Q K +I+ G T K + T+ + V+ G+++ C P+N +L+E
Sbjct: 195 AVSFSLAQ-KELAIVHGPPGTGKTT-TVVEIILQAVQQ-GLKVLCCAPSNVAVDNLVERL 251
Query: 105 SG 106
+G
Sbjct: 252 AG 253
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 263 (97.6 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 88/267 (32%), Positives = 128/267 (47%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F + +DE QA E IP+ K +LAGD KQL P S A GL +S +E
Sbjct: 368 FDVVVVDECAQALEASCWIPLL----KAPKCILAGDHKQLPPTTVSHKAALAGLSRSLME 423
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
RL E ++G V L YR H AI S+ Y G+L A A L +
Sbjct: 424 RLAE----KHG-AAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVA 478
Query: 663 PNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVI 717
++ P+L GC + E ++ S N EV V I L + + DI VI
Sbjct: 479 DTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVD-AGVQAGDIAVI 537
Query: 718 TPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
PY QV +++ L P++++ +V+ FQG+E+E +I++ VRS K +GF
Sbjct: 538 APYNLQVDLLRQSLSN-KHPELEIKSVDGFQGREKEAVILTFVRSNRKGE-------VGF 589
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIV 804
L+ RR NVA+TRAR + ++ + H V
Sbjct: 590 LAEDRRINVAVTRARRHVAVICDSHTV 616
Score = 159 (61.0 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 57/203 (28%), Positives = 96/203 (47%)
Query: 301 SLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKF--AKEFHTQHRNGSLYNVSFTYNR 358
S GD V + ++ G + R+ VI+ F + +F + Y + N
Sbjct: 82 SFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENTYRLLKLAND 141
Query: 359 INMRRMYQAVQAAENLE--P--NLL--FPSQSTKRRSIKAAPFVPFNS-LNEEQTRSVEI 411
+ +R+ +A+ + P +L+ ST + + P +N+ L+ Q +V
Sbjct: 142 VTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTPSPATEIPPLTFYNTTLDPSQKEAVSF 201
Query: 412 ILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISN 471
L K +I+GPPGTGKT T+VE ILQ + ++ ++L CA SN A D+++ERL
Sbjct: 202 ALAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVERL--- 254
Query: 472 EVAGIKENEILRLNATSRPYEDV 494
+ + +ILRL +R E V
Sbjct: 255 ---ALCKKQILRLGHPARLLESV 274
Score = 43 (20.2 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 243 VEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLA 289
V+ LV + L + RL E ++ HS++ V R A ++A
Sbjct: 247 VDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVA 293
Score = 39 (18.8 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 47 SVPFPFVQGKPQSILVGE--TSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLME 102
+V F Q K +I+ G T K + T+ + V+ G+++ C P+N +L+E
Sbjct: 198 AVSFALAQ-KEVAIIHGPPGTGKTT-TVVEIILQAVKQ-GLKVLCCAPSNIAVDNLVE 252
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 263 (97.6 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 88/267 (32%), Positives = 128/267 (47%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F + +DE QA E IP+ K +LAGD KQL P S A GL +S +E
Sbjct: 368 FDVVVVDECAQALEASCWIPLL----KAPKCILAGDHKQLPPTTVSHKAALAGLSRSLME 423
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
RL E ++G V L YR H AI S+ Y G+L A A L +
Sbjct: 424 RLAE----KHG-AAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVA 478
Query: 663 PNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVI 717
++ P+L GC + E ++ S N EV V I L + + DI VI
Sbjct: 479 DTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVD-AGVQAGDIAVI 537
Query: 718 TPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
PY QV +++ L P++++ +V+ FQG+E+E +I++ VRS K +GF
Sbjct: 538 APYNLQVDLLRQSLSN-KHPELEIKSVDGFQGREKEAVILTFVRSNRKGE-------VGF 589
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIV 804
L+ RR NVA+TRAR + ++ + H V
Sbjct: 590 LAEDRRINVAVTRARRHVAVICDSHTV 616
Score = 159 (61.0 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 57/203 (28%), Positives = 96/203 (47%)
Query: 301 SLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKF--AKEFHTQHRNGSLYNVSFTYNR 358
S GD V + ++ G + R+ VI+ F + +F + Y + N
Sbjct: 82 SFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENTYRLLKLAND 141
Query: 359 INMRRMYQAVQAAENLE--P--NLL--FPSQSTKRRSIKAAPFVPFNS-LNEEQTRSVEI 411
+ +R+ +A+ + P +L+ ST + + P +N+ L+ Q +V
Sbjct: 142 VTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTPSPATEIPPLTFYNTTLDPSQKEAVSF 201
Query: 412 ILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISN 471
L K +I+GPPGTGKT T+VE ILQ + ++ ++L CA SN A D+++ERL
Sbjct: 202 ALAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVERL--- 254
Query: 472 EVAGIKENEILRLNATSRPYEDV 494
+ + +ILRL +R E V
Sbjct: 255 ---ALCKKQILRLGHPARLLESV 274
Score = 43 (20.2 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 243 VEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLLA 289
V+ LV + L + RL E ++ HS++ V R A ++A
Sbjct: 247 VDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVA 293
Score = 39 (18.8 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 47 SVPFPFVQGKPQSILVGE--TSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLME 102
+V F Q K +I+ G T K + T+ + V+ G+++ C P+N +L+E
Sbjct: 198 AVSFALAQ-KEVAIIHGPPGTGKTT-TVVEIILQAVKQ-GLKVLCCAPSNIAVDNLVE 252
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 263 (97.6 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 90/279 (32%), Positives = 138/279 (49%)
Query: 538 IKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLG 597
+K F + +DEA QA EP+ IP+ + V+LAGD QL P + SK
Sbjct: 378 LKGQRFDAVIIDEASQALEPQCWIPLLGM----NKVILAGDHMQLSPNVQSK-------- 425
Query: 598 KSYLERLFECEFYRNGDEGYVTKLVRN--YRCHPAILDLPSKLFYGGELLACKDDATSL- 654
+ Y+ +FE GD + K N YR H I PS FY +L+ ++ L
Sbjct: 426 RPYIS-MFERLVKSQGD---LVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLL 481
Query: 655 -SSAKVDIFPNKDFPVLFFGIQGC---DEREGNNPSWF-----NRFEVSKVVDIINKLRE 705
V+ D P+ F+ G D+R + +++ N +E V I+ L E
Sbjct: 482 MDLENVEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLE 541
Query: 706 NTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVK 765
L DI V+TPY QV I+++L+ + +V++G+V++ QG+E+E II S VRS
Sbjct: 542 -AGLEAKDIAVVTPYNAQVALIRQLLKEKGI-EVEMGSVDKVQGREKEAIIFSLVRS--- 596
Query: 766 HNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
N+ +GFL+ RR NVAITR + L ++G+ + V
Sbjct: 597 -NDVRE---VGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
Score = 147 (56.8 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAA 456
FN LN Q ++V+ + K +I+GPPGTGKT TLVE I Q+ + RILVC A
Sbjct: 206 FNKELNASQKKAVKFSIAVKELS--LIHGPPGTGKTHTLVEIIQQL--VLRNKRILVCGA 261
Query: 457 SNSAADHMLERLISNEVAGIKENEILRL 484
SN A D++++RL S+ + ++ RL
Sbjct: 262 SNLAVDNIVDRLSSSGIPMVRLGHPARL 289
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 324 (119.1 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 92/267 (34%), Positives = 140/267 (52%)
Query: 542 NFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYL 601
NFS + +DEA QA E +++IP+ K +L GDP QL P + SK A + +S
Sbjct: 1371 NFSTVIIDEAAQAVELDTIIPLRYGAKK---CILVGDPNQLPPTVLSKKAASLNYSQSLF 1427
Query: 602 ERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDI 661
R+ + + L YR HP I PSK FY L +D +++ +
Sbjct: 1428 VRI------QKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRL----EDGDNMAEKTQQV 1477
Query: 662 FP-NKDFPVL-FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLREN-TELNETD-IGVI 717
+ N F F ++G ER N S +N EV +V+++++L ++N T IGVI
Sbjct: 1478 WHVNPKFTQYRLFDVRG-KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVI 1536
Query: 718 TPYRQQVLKIKKVLETWD----MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTY 773
TPYR Q+ ++++ + M + + TV+ FQGQE+++I S V+S KH
Sbjct: 1537 TPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHG------ 1590
Query: 774 CLGFLSNPRRFNVAITRARSLLIIVGN 800
+GFL + RR NVA+TRARS L+I+GN
Sbjct: 1591 -IGFLRDFRRLNVALTRARSSLLIIGN 1616
Score = 103 (41.3 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 39/105 (37%), Positives = 52/105 (49%)
Query: 382 SQSTKRRS--IKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLV--- 436
SQ K S IKAA + +NE Q +++ L G +I GPPGTGKT T++
Sbjct: 1111 SQPVKHSSSEIKAA--MKRYQVNEPQAKAIMCALDNNGFT--LIQGPPGTGKTKTIIGII 1166
Query: 437 EAIL-------------QVYSTREHSRILVCAASNSAADHMLERL 468
A+L Q ST +IL+CA SN+A D +L RL
Sbjct: 1167 SALLVDLSRYHITRPNQQSKSTESKQQILLCAPSNAAVDEVLLRL 1211
Score = 41 (19.5 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 102 EPPSGKPDP-----QKDQGFLEGF-SIED--RVLQPLRTLTIWLSCKPKEMGLHKSVVQ 152
EP + P+P + D ++ F ++E VLQP+ + W + ++ L S V+
Sbjct: 928 EPANQSPNPVLKFHKLDGKIIDSFKTVEHYMEVLQPMIFMECWSQIQSTKLDLKFSPVE 986
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 259 (96.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 86/266 (32%), Positives = 129/266 (48%)
Query: 538 IKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLG 597
+ +F + +DE QA E IP+ K +LAGD +QL P S A GL
Sbjct: 363 LPENHFDVVVVDECAQALEASCWIPLL----KAPKCILAGDHRQLPPTTISHKAALAGLS 418
Query: 598 KSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSA 657
+S +ERL E ++G G V L YR H AI S+ Y G+L A A L
Sbjct: 419 RSLMERLVE----KHG-AGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKD 473
Query: 658 KVDIFPNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNET 712
+ ++ P+L GC + E ++ S N EV V I L + ++
Sbjct: 474 LPGVADTEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVD-AGVHAG 532
Query: 713 DIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRT 772
DI VI PY QV +++ L P++++ +V+ FQG+E+E +I++ VRS K
Sbjct: 533 DIAVIAPYNLQVDLLRQSLSN-KHPELEIKSVDGFQGREKEAVILTFVRSNRKGE----- 586
Query: 773 YCLGFLSNPRRFNVAITRARSLLIIV 798
+GFL+ RR NVA+TRAR + ++
Sbjct: 587 --VGFLAEDRRINVAVTRARRHVAVI 610
Score = 157 (60.3 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 301 SLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKF--AKEFHTQHRNGSLYNVSFTYNR 358
S GD V + A ++ G + R+ V + F + +F + Y + N
Sbjct: 82 SFTSGDIVGLYDANESSQLATGVLTRITQKSVTVAFDESHDFQLNLDRENTYRLLKLAND 141
Query: 359 INMRRMYQAVQAAENLE--P--NLL--FPSQSTKRRSIKAAPFVPFNS-LNEEQTRSVEI 411
+ +R+ +A+ + P +L+ S+ + + PF +N+ L+ Q +V
Sbjct: 142 VTYKRLKKALMTLKKYHSGPASSLIDVLLGGSSPSPTTEIPPFTFYNTALDPSQKEAVSF 201
Query: 412 ILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISN 471
L K +I+GPPGTGKT T+VE ILQ + ++ +IL CA SN A D+++ERL
Sbjct: 202 ALAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKILCCAPSNVAVDNLVERL--- 254
Query: 472 EVAGIKENEILRLNATSRPYE 492
+ + ILRL +R E
Sbjct: 255 ---ALCKKRILRLGHPARLLE 272
Score = 40 (19.1 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL E + HS++ V R A ++A
Sbjct: 269 RLLESAQQHSLDAVLARSDNAQIVA 293
Score = 40 (19.1 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 47 SVPFPFVQGKPQSILVGE--TSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLME 102
+V F Q K +I+ G T K + T+ + V+ G++I C P+N +L+E
Sbjct: 198 AVSFALAQ-KEVAIIHGPPGTGKTT-TVVEIILQAVKQ-GLKILCCAPSNVAVDNLVE 252
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 317 (116.6 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 97/265 (36%), Positives = 141/265 (53%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
FS + +DEAGQ+ E E++IP+ + C K +VL GDP+QL P I S A+ +G G+S +
Sbjct: 2198 FSCVIVDEAGQSCEVETLIPLIHRCNK---LVLVGDPRQLPPTIKSIKAQEYGYGQSLMA 2254
Query: 603 RL---FECEFYRNGDEGY-VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAK 658
RL E + N V +L YR HP I PS Y L D AT +
Sbjct: 2255 RLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKT--DKATEENRCS 2312
Query: 659 VDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENT-ELNETDIGVI 717
+ +P + P L F + G E + S+ N EV V++II ++E +L IG+I
Sbjct: 2313 SE-WPFQ--PYLVFDV-GDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRIGII 2368
Query: 718 TPYRQQVLKIKKVLETW---DMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYC 774
TPY Q KI++ L+ + P +V TV+ FQG+E++ IIV+ VR+
Sbjct: 2369 TPYSAQKKKIQEELDRVFKNNSPG-EVDTVDAFQGREKDCIIVTCVRANSSKGS------ 2421
Query: 775 LGFLSNPRRFNVAITRARSLLIIVG 799
+GFL++ +R NV ITRAR L I+G
Sbjct: 2422 IGFLASLQRLNVTITRARFSLFILG 2446
Score = 108 (43.1 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 389 SIKAAPFVPFNSLNEEQTRSVEIILGCKGAPP-----YVIYGPPGTGKTMTLVEAILQVY 443
S ++A F N NE+Q R++E P +I+GPPGTGK+ T+V + +V
Sbjct: 1947 SSESATFC-MNEYNEDQKRAIETAYAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVL 2005
Query: 444 --STR-----------EHSRILVCAASNSAADHMLERLI 469
+TR + +R LVCA SN+A D +++++I
Sbjct: 2006 RENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDELMKKII 2044
Score = 49 (22.3 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 245 GLVRKNYF-SFFSTLLVMEELRLEEDMRCHSMECVTMRRKGAHLL 288
GL Y S+ S L E+L D C+ +ECV K L
Sbjct: 11 GLDATEYLKSYASKQLSPEDLEGSNDDLCYCLECVVEYHKAREKL 55
Score = 37 (18.1 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 138 SCKPKEMGLHKSVVQFDIGDDR 159
SC K+ G H+ V +DR
Sbjct: 821 SCMRKDCGKHQGVNTVGENEDR 842
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 258 (95.9 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 85/267 (31%), Positives = 129/267 (48%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F + +DE QA E IP+ K +LAGD +QL P S A GL +S +E
Sbjct: 368 FDVVVVDECAQALEASCWIPLL----KAPKCILAGDHRQLPPTTVSHRAALAGLSRSLME 423
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
RL E ++G G V L YR H AI+ S+ Y G+ + A L +
Sbjct: 424 RLAE----KHG-AGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVT 478
Query: 663 PNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVI 717
++ P+L GC + E ++ S N EV V I L + + DI VI
Sbjct: 479 DTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVD-AGVQAGDIAVI 537
Query: 718 TPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGF 777
PY QV +++ L P++++ +V+ FQG+E+E ++++ VRS K +GF
Sbjct: 538 APYNLQVDLLRQSLSN-KHPELEIKSVDGFQGREKEAVLLTFVRSNRKGE-------VGF 589
Query: 778 LSNPRRFNVAITRARSLLIIVGNPHIV 804
L+ RR NVA+TRAR + ++ + H V
Sbjct: 590 LAEDRRINVAVTRARRHVAVICDSHTV 616
Score = 157 (60.3 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 60/205 (29%), Positives = 96/205 (46%)
Query: 301 SLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRN---GSLYNVSFTYN 357
S GD V + N+ G + R+ V + F E H N + Y + N
Sbjct: 82 SFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAF-DESHDLQLNLDRENTYRLLKLAN 140
Query: 358 RINMRRMYQAVQAAENLE--P-----NLLFPSQSTKRRSIKAAPFVPFNS-LNEEQTRSV 409
+ +R+ +A+ + P ++L S ST +++ P +N+ L+ Q +V
Sbjct: 141 DVTYKRLKKALMTLKKYHSGPASSLIDILLGS-STPSPAMEIPPLSFYNTTLDLSQKEAV 199
Query: 410 EIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLI 469
L K +I+GPPGTGKT T+VE ILQ + ++ ++L CA SN A D+++ERL
Sbjct: 200 SFALAQKELA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVERL- 254
Query: 470 SNEVAGIKENEILRLNATSRPYEDV 494
+ + ILRL +R E V
Sbjct: 255 -----ALCKKRILRLGHPARLLESV 274
Score = 42 (19.8 bits), Expect = 9.8e-17, Sum P(3) = 9.8e-17
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL E ++ HS++ V R A ++A
Sbjct: 269 RLLESVQHHSLDAVLARSDNAQIVA 293
Score = 39 (18.8 bits), Expect = 9.8e-17, Sum P(3) = 9.8e-17
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 47 SVPFPFVQGKPQSILVGE--TSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLME 102
+V F Q K +I+ G T K + T+ + V+ G+++ C P+N +L+E
Sbjct: 198 AVSFALAQ-KELAIIHGPPGTGKTT-TVVEIILQAVKQ-GLKVLCCAPSNIAVDNLVE 252
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 258 (95.9 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 85/262 (32%), Positives = 129/262 (49%)
Query: 542 NFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYL 601
+F + +DE QA E IP+ K +LAGD KQL P S A GL S +
Sbjct: 367 HFDVVVIDECAQALEASCWIPLL----KARKCILAGDHKQLPPTTVSHKAALAGLSLSLM 422
Query: 602 ERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDI 661
ERL E +G V L YR H AI+ S+ Y G+L A A L +
Sbjct: 423 ERLAE----EHGAR-VVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLPGV 477
Query: 662 FPNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGV 716
++ P+L GC + + ++ S N EV ++V + + + + +DI V
Sbjct: 478 AATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEV-RLVSLHIQALVDAGVQASDIAV 536
Query: 717 ITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
ITPY QV +++ L P++++ +V+ FQG+E+E +++S VRS K +G
Sbjct: 537 ITPYNLQVDLLRQSL-AHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGE-------VG 588
Query: 777 FLSNPRRFNVAITRARSLLIIV 798
FL+ RR NVA+TRAR + +V
Sbjct: 589 FLAEDRRINVAVTRARRHVAVV 610
Score = 154 (59.3 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 50/144 (34%), Positives = 73/144 (50%)
Query: 355 TYNRINMR----RMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVE 410
TY R+ + Y + A+ +E +LF + S P SL+ Q +V
Sbjct: 143 TYKRLKKALITLKKYHSGPASSLIE--VLFGGSAPSPASNTEPPLFCNTSLDASQKEAVS 200
Query: 411 IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
L K +I+GPPGTGKT T+VE ILQ + R+ ++L CA SN A D+++ERL
Sbjct: 201 FALSQKELA--IIHGPPGTGKTTTVVEIILQ--AVRQGLKVLCCAPSNIAVDNLVERL-- 254
Query: 471 NEVAGIKENEILRLNATSRPYEDV 494
A K+ +ILRL +R E +
Sbjct: 255 ---ARCKQ-KILRLGHPARLLESI 274
Score = 42 (19.8 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL E ++ HS++ V R A ++A
Sbjct: 269 RLLESIQQHSLDAVLARSDNAQIVA 293
Score = 37 (18.1 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 84 GIRIYCSEPANSLTLSLME 102
G+++ C P+N +L+E
Sbjct: 234 GLKVLCCAPSNIAVDNLVE 252
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 258 (95.9 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 85/262 (32%), Positives = 129/262 (49%)
Query: 542 NFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYL 601
+F + +DE QA E IP+ K +LAGD KQL P S A GL S +
Sbjct: 367 HFDVVVIDECAQALEASCWIPLL----KARKCILAGDHKQLPPTTVSHKAALAGLSLSLM 422
Query: 602 ERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDI 661
ERL E +G V L YR H AI+ S+ Y G+L A A L +
Sbjct: 423 ERLAE----EHGAR-VVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLPGV 477
Query: 662 FPNKD--FPVLFFGIQGC---DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGV 716
++ P+L GC + + ++ S N EV ++V + + + + +DI V
Sbjct: 478 AATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEV-RLVSLHIQALVDAGVQASDIAV 536
Query: 717 ITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
ITPY QV +++ L P++++ +V+ FQG+E+E +++S VRS K +G
Sbjct: 537 ITPYNLQVDLLRQSL-AHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGE-------VG 588
Query: 777 FLSNPRRFNVAITRARSLLIIV 798
FL+ RR NVA+TRAR + +V
Sbjct: 589 FLAEDRRINVAVTRARRHVAVV 610
Score = 154 (59.3 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 50/144 (34%), Positives = 73/144 (50%)
Query: 355 TYNRINMR----RMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVE 410
TY R+ + Y + A+ +E +LF + S P SL+ Q +V
Sbjct: 143 TYKRLKKALITLKKYHSGPASSLIE--VLFGGSAPSPASNTEPPLFCNTSLDASQKEAVS 200
Query: 411 IILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
L K +I+GPPGTGKT T+VE ILQ + R+ ++L CA SN A D+++ERL
Sbjct: 201 FALSQKELA--IIHGPPGTGKTTTVVEIILQ--AVRQGLKVLCCAPSNIAVDNLVERL-- 254
Query: 471 NEVAGIKENEILRLNATSRPYEDV 494
A K+ +ILRL +R E +
Sbjct: 255 ---ARCKQ-KILRLGHPARLLESI 274
Score = 42 (19.8 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL E ++ HS++ V R A ++A
Sbjct: 269 RLLESIQQHSLDAVLARSDNAQIVA 293
Score = 37 (18.1 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 84 GIRIYCSEPANSLTLSLME 102
G+++ C P+N +L+E
Sbjct: 234 GLKVLCCAPSNIAVDNLVE 252
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 275 (101.9 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 93/290 (32%), Positives = 141/290 (48%)
Query: 515 EALGRYRIIISTYMSSSLLNT-NGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
E+L ++++T +S + +F + +DE QA E IP+ K
Sbjct: 337 ESLAAASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEASCWIPLL----KARKC 392
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
+LAGD KQL P I S A GL S +ERL E R+G G + L YR H AI
Sbjct: 393 ILAGDHKQLPPTIVSHKAALAGLSLSLMERLAE----RHG-AGALRMLTVQYRMHQAIAR 447
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKD--FPVLFFGIQGC---DEREGNNPSWF 688
S+ Y G+L A A L + ++ P+L GC + E + S
Sbjct: 448 WASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSKG 507
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQ 748
N EV ++V + + + + DI VITPY QV +++ L +P++++ +V+ FQ
Sbjct: 508 NPGEV-RLVGLHVQALVDAGVRAADIAVITPYNLQVDLLRQSL-AHRLPELEIRSVDGFQ 565
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
G+E+E +I+S VRS K +GFL+ RR NVA+TRAR + +V
Sbjct: 566 GREKEAVILSFVRSNRKGE-------VGFLAEDRRINVAVTRARRHVAVV 608
Score = 134 (52.2 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 400 SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNS 459
+L+ Q +V L K +I+GPPGTGKT T+VE ILQ + + S++L CA SN
Sbjct: 188 ALDASQQEAVLFALSQKELA--IIHGPPGTGKTTTVVEIILQ--AVKRGSKVLCCAPSNV 243
Query: 460 AADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
A D+++ERL A K+ ILRL +R + +
Sbjct: 244 AVDNLVERL-----AQWKQR-ILRLGHPARLLDSI 272
Score = 39 (18.8 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL + ++ HS++ V R A ++A
Sbjct: 267 RLLDSIQQHSLDAVLARSDSARIVA 291
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 268 (99.4 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 92/290 (31%), Positives = 139/290 (47%)
Query: 515 EALGRYRIIISTYMSSSLLNT-NGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
E+L R++++T +S + G+F + +DE QA E +P+ K
Sbjct: 337 ESLTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPLL----KARKC 392
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
+LAGD KQL P I S A GL S +ERL E G G + L YR H AI
Sbjct: 393 ILAGDHKQLPPTIISHKAALAGLALSLMERLVE----ERG-AGVLRMLTVQYRMHQAIAQ 447
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKD--FPVLFFGIQGC---DEREGNNPSWF 688
S+ Y G L A A L + ++ P+L GC + E + S
Sbjct: 448 WASEALYHGRLTAHASVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSKG 507
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQ 748
N EV ++V + + + + D+ VITPY QV +++ L P++++ +V+ FQ
Sbjct: 508 NPGEV-RLVRLHVQALVDAGVPAGDVAVITPYNLQVDLLRQSLAQRH-PELEIKSVDGFQ 565
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
G+E+E +I+S VRS K +GFL+ RR NVA+TRAR + +V
Sbjct: 566 GREKEAVILSFVRSNRKGE-------VGFLAEDRRINVAVTRARRHVAVV 608
Score = 141 (54.7 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 355 TYNRINMR----RMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS-LNEEQTRSV 409
TY R+ + Y + A+ +E +LF + + S P +N+ L+ Q +V
Sbjct: 141 TYKRLKKALTTLQKYHSGPASALIE--VLFGASAPSPAS-DIPPLTFYNTALDASQKEAV 197
Query: 410 EIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLI 469
L K +I+GPPGTGKT T+VE ILQ + ++ S++L CA SN A D+++ERL
Sbjct: 198 LFALSQKELA--IIHGPPGTGKTTTVVEIILQ--AVKQGSKVLCCAPSNVAVDNLVERL- 252
Query: 470 SNEVAGIKENEILRLNATSRPYEDV 494
A K+ I+RL +R E +
Sbjct: 253 ----ARWKQR-IVRLGHPARLLESI 272
Score = 47 (21.6 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLA 289
RL E ++ HS++ V R GA ++A
Sbjct: 267 RLLESIQQHSLDAVLARSDGARVVA 291
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 361 (132.1 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 114/397 (28%), Positives = 191/397 (48%)
Query: 374 LEPNL-LFPSQSTKRRSIKAA-PFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGK 431
L+P+L ++ ++ R I + + LN Q ++E L KG +I GPPGTGK
Sbjct: 1366 LQPSLEVYNLMTSMRMEIPSLLRSICIQELNASQFNAIETSLSKKGIT--LIQGPPGTGK 1423
Query: 432 TMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPY 491
T T+ + + + +ILVC S+++ D + +R + + + L
Sbjct: 1424 TTTIYYLLSILLAINPKFKILVCGPSHASVDEVAKRCLKKSLINVDGKPYLPNMVRIGKL 1483
Query: 492 EDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSH--IFLD 549
+++ D R ++++ +E + I+ ST +S +G R NF + +D
Sbjct: 1484 QNISPDCHRISPYDKT--PAQRKEIIRNANIVFSTLSASG----SGSVRSNFKANIVLVD 1537
Query: 550 EAGQASEPESMIPIANLCTKQTV-VVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECE 608
E+ Q+SEP S+IP LC ++L GDP QL P I+S + GL S ERL +
Sbjct: 1538 ESTQSSEPASLIP---LCIGNIEKLILVGDPLQLPPTIFSSGSAENGLNISLFERLSKVL 1594
Query: 609 FYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF- 667
V L YR HP I PS FY LL D+ SL + + + +
Sbjct: 1595 --------PVEMLNTQYRMHPTISRFPSNQFYKDRLLD-GDNVKSLVYNQHNFHSDIKYG 1645
Query: 668 PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLK 726
P+ F+ + E G S N+ E++ V +I KL ++ E + G+ITPY+ Q +
Sbjct: 1646 PIRFYDVIDSKEESGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSE 1704
Query: 727 IKKVLETWDMP-DVKVGTVEQFQGQEREVIIVSTVRS 762
IK+ + ++ P +++ T++ QG E+++II+S VRS
Sbjct: 1705 IKEQHKQFNYPLNIETSTIDGVQGSEKDIIILSCVRS 1741
Score = 230 (86.0 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 63/190 (33%), Positives = 103/190 (54%)
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQG 676
V L YR HP I PS FY LL D+ SL + + + + P+ F+ +
Sbjct: 1596 VEMLNTQYRMHPTISRFPSNQFYKDRLLD-GDNVKSLVYNQHNFHSDIKYGPIRFYDVID 1654
Query: 677 CDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E G S N+ E++ V +I KL ++ E + G+ITPY+ Q +IK+ + ++
Sbjct: 1655 SKEESGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFN 1713
Query: 736 MP-DVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSL 794
P +++ T++ QG E+++II+S VRS +R +GFLS+ RR NVA+TRA+
Sbjct: 1714 YPLNIETSTIDGVQGSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFG 1763
Query: 795 LIIVGNPHIV 804
L ++GN ++
Sbjct: 1764 LFVIGNSKLL 1773
Score = 48 (22.0 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 232 SLANKILPQFL-VEGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRR 282
S+ NK+ + ++GL++K Y F S LL +E E S++ T+ +
Sbjct: 362 SIFNKLFHRSEDIQGLIKK-YPGFKSELLSVETFIKESQTNIDSVKITTLNQ 412
Score = 41 (19.5 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 215 GSNYKLPEFPIPNDVRESLANKI 237
GS K+P F + N + L +K+
Sbjct: 1077 GSTLKIPSFKLLNSEKLGLISKL 1099
Score = 39 (18.8 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 20/111 (18%), Positives = 47/111 (42%)
Query: 259 LVMEELRLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANAD 318
L++EE R + + +E +++ + L+ LD + + P+ +H F +L+ + +
Sbjct: 1197 LIVEEYRAQLEGDFDEIEGISISEQDGTLIGLDRVKMNDT-PT-IHS---FQELSEDSVE 1251
Query: 319 AKKGSIYRVEADEVILKFAKEFHT-QHRNGSLYNVSFTYNRINMRRMYQAV 368
+ E +E+ L F H N ++ +S ++ Q +
Sbjct: 1252 ITFNIKVKDELEEIYLNDILLFKAFDHTNKPMFALSLVTRSSELKSKKQKI 1302
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 153 FDIGDDRFERMVLLLAEDSVSR-SLAS--NRPYSRVPRKMQS 191
FDI ++ L+ EDS S S+ +R + P K +S
Sbjct: 916 FDINQSLKHSLLKLIFEDSTSADSIIKTLDRLFKSYPSKKKS 957
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 247 (92.0 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 89/290 (30%), Positives = 137/290 (47%)
Query: 515 EALGRYRIIISTYMSSSLLNT-NGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
E+L ++++T +S + F + +DE QA E IP+ K
Sbjct: 340 ESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLL----KARKC 395
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
+LAGD KQL P S A GL S +ERL E E+ G V L YR H AI+
Sbjct: 396 ILAGDHKQLPPTTVSHKAALAGLSLSLMERLAE-EY---GAR-VVRTLTVQYRMHQAIMR 450
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKD--FPVLFFGIQGC---DEREGNNPSWF 688
S Y G+L A A L + ++ P+L GC + E + S
Sbjct: 451 WASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKG 510
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQ 748
N EV ++V + + + + DI V++PY QV +++ L P++++ +V+ FQ
Sbjct: 511 NPGEV-RLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSL-VHRHPELEIKSVDGFQ 568
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
G+E+E +I+S VRS K +GFL+ RR NVA+TRAR + ++
Sbjct: 569 GREKEAVILSFVRSNRKGE-------VGFLAEDRRINVAVTRARRHVAVI 611
Score = 156 (60.0 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 70/235 (29%), Positives = 108/235 (45%)
Query: 278 VTMRRKGAH--LLALDVP---GLAERRPS--LVHGDFVFVKLAA-ANADAKKGSIYRVEA 329
V+ +R G + LL P G A PS GD V + AA + G + RV
Sbjct: 52 VSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQ 111
Query: 330 DEVILKF--AKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLE--P-----NLLF 380
V + F + +F + Y + N + RR+ +A+ A + P +LF
Sbjct: 112 KSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLF 171
Query: 381 PSQSTKRRSIKAAPFVPFNS-LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAI 439
+S + + P FN+ L+ Q +V L K +I+GPPGTGKT T+VE I
Sbjct: 172 -GRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELA--IIHGPPGTGKTTTVVEII 228
Query: 440 LQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
LQ + ++ ++L CA SN A D+++ERL + + ILRL +R E +
Sbjct: 229 LQ--AVKQGLKVLCCAPSNIAVDNLVERL------ALCKQRILRLGHPARLLESI 275
Score = 44 (20.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 265 RLEEDMRCHSMECVTMRRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKKGSI 324
RL E ++ HS++ V R A ++A D+ R + D VFVK D ++ S
Sbjct: 270 RLLESIQQHSLDAVLARSDSAQIVA-DI------RKDI---DQVFVKNKKTQ-DKREKSN 318
Query: 325 YRVEADEVILKFAKE 339
+R E +++ K KE
Sbjct: 319 FRNEI-KLLRKELKE 332
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 84 GIRIYCSEPANSLTLSLME 102
G+++ C P+N +L+E
Sbjct: 235 GLKVLCCAPSNIAVDNLVE 253
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 344 (126.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 139/448 (31%), Positives = 211/448 (47%)
Query: 396 VP-FNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHS-RILV 453
+P F LN Q+ +V +L P +I GPPGTGKT+T A + + ++ H RILV
Sbjct: 403 IPNFAQLNSSQSNAVSHVLQ---RPLSLIQGPPGTGKTVT--SATIVYHLSKIHKDRILV 457
Query: 454 CAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPP 513
CA SN A DH+ +L G+K ++RL A SR EDV + ++
Sbjct: 458 CAPSNVAVDHLAAKLRD---LGLK---VVRLTAKSR--EDVESSVSNL-----ALHNLVG 504
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIA-------NL 566
R A G + ++ L+ + KR F + + ++ L
Sbjct: 505 RGAKGELKNLLKLKDEVGELSASDTKR--FVKLVRKTEAEILNKADVVCCTCVGAGDKRL 562
Query: 567 CTK-QTV-----------------------VVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
TK +TV V+L GD +QLGPVI + A GL +S E
Sbjct: 563 DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFE 622
Query: 603 RLFECEFYRNGDEGYVT-KLVRNYRCHPAILDLPSKLFYGGELL-ACKDDATSLSSAKVD 660
RL G+V +L YR +P + + PS +FY G L + ++ ++K
Sbjct: 623 RLISL--------GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFP 674
Query: 661 IFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITP 719
+P + P++F+ G +E N S+ NR E II KL R+ + + IGVITP
Sbjct: 675 -WPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ--IGVITP 731
Query: 720 YRQQ---VLKIKKVLETWDMP---DVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTY 773
Y Q +L+ ++ + D V+V +V+ FQG+E++ II+S VR+ NE
Sbjct: 732 YEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRA----NE---QQ 784
Query: 774 CLGFLSNPRRFNVAITRARSLLIIVGNP 801
+GFL +PRR NV +TRA+ L+I+GNP
Sbjct: 785 AIGFLRDPRRLNVGLTRAKYGLVILGNP 812
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 309 (113.8 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 97/293 (33%), Positives = 153/293 (52%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
+I T +S L RG FS + +DEAGQ+ E E++ P+ + C K +VL G
Sbjct: 2127 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNK---LVLVG 2183
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDE----GY--VTKLVRNYRCHPAI 631
DPKQL P + S A+ +G +S + R C+ E G V +L YR HP I
Sbjct: 2184 DPKQLPPTVISMKAQEYGYDQSMMARF--CKLLEENVEQNMIGRLPVLQLTIQYRMHPDI 2241
Query: 632 LDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI-QGCDEREGNNPSWFNR 690
PS Y L + T S++ +P + P L F + G ++R+ N S+ N
Sbjct: 2242 CLFPSNYVYNKNLKTNRLTETIRCSSE---WPFQ--PYLVFDVGDGSEQRD--NDSYINV 2294
Query: 691 FEVSKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPD-VKVGTVEQF 747
E+ V++II ++E +++ +IG+IT Y+ Q I+K LE +D +V TV+ F
Sbjct: 2295 QEIKLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAF 2354
Query: 748 QGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
QG++++ IIV+ VR++ +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2355 QGRQKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILGH 2401
Score = 93 (37.8 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 422 VIYGPPGTGKTMTLVEAILQVY--STRE-HS-----------RILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ S R+ HS R+LVCA SN+A D ++++
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 468 LI 469
+I
Sbjct: 1997 II 1998
Score = 55 (24.4 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 306 DFVFVKLAAANADA--KKGSI-------YRVEADEVILKFAKEFHTQHRNGSLYN 351
DF+ K++ +N D K G++ ++V+ DE+ K + QHR +L N
Sbjct: 748 DFL-EKVSTSNGDVPLKDGTVGKTSKPNFKVQKDEICAKLSHVLKKQHRKSTLVN 801
Score = 40 (19.1 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 461 ADHMLERLISNEVAGIKEN 479
AD + E ++ N+ G+KE+
Sbjct: 1113 ADSVSEEVVRNKEKGVKEH 1131
Score = 38 (18.4 bits), Expect = 7.5e-22, Sum P(3) = 7.5e-22
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 425 GPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENE 480
GP GTG T + + +V S + +L+ +AS + EVA ++ E
Sbjct: 1414 GPWGTGITCLVNQCESRVLSGGVPTDVLMGSASEDPVGGGALTVQVGEVAAVRAAE 1469
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 368 (134.6 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 121/398 (30%), Positives = 194/398 (48%)
Query: 374 LEPNL-LFPSQSTKRRSIKAA-PFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGK 431
L+P+L ++ ++ R I + + LN Q +VE L KG +I GPPGTGK
Sbjct: 1565 LQPSLEVYNLMTSMRMEIPSLLRSMCIQELNTSQFSAVETSLSTKGIT--LIQGPPGTGK 1622
Query: 432 TMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPY 491
T T+ + + + +ILVC S+++ D + +R + + I L
Sbjct: 1623 TTTIYYLLSILLAINPKFKILVCGPSHASVDEVAKRCLKKSLVNIDGKPYLPNMVRIGKL 1682
Query: 492 EDVPTDFIRFCFFEESIFKCPP-REALGRYRIIISTYMSSSLLNTNGIKRGNFSH--IFL 548
+++ D R F+ K P R+A+ R II +S+S + I R NF + +
Sbjct: 1683 QNISPDCHRISLFD----KTPAQRKAIIRNATIIFATLSAS--GSKPI-RSNFKANIVLV 1735
Query: 549 DEAGQASEPESMIPIANLCTKQTV-VVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFEC 607
DE+ Q+SEP S+IP LC ++L GDP QL P I+S ++ GL S ERL +
Sbjct: 1736 DESTQSSEPASLIP---LCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLSKV 1792
Query: 608 EFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF 667
V L YR HP I PS FY LL D+ SL + + + +
Sbjct: 1793 L--------PVEMLNTQYRMHPTISRFPSNQFYKDRLLD-GDNVKSLVYNQHNFHSDIKY 1843
Query: 668 -PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVL 725
P+ F+ + E G S N+ E++ V +I KL ++ E + G+ITPY+ Q
Sbjct: 1844 GPIRFYDVIDSKEESGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKS 1902
Query: 726 KIKKVLETWDMP-DVKVGTVEQFQGQEREVIIVSTVRS 762
+IK+ + ++ P +++ T++ QG E+++II+S VRS
Sbjct: 1903 EIKEQHKQFNYPLNIETSTIDGVQGSEKDIIILSCVRS 1940
Score = 230 (86.0 bits), Expect = 3.2e-11, Sum P(5) = 3.2e-11
Identities = 63/190 (33%), Positives = 103/190 (54%)
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQG 676
V L YR HP I PS FY LL D+ SL + + + + P+ F+ +
Sbjct: 1795 VEMLNTQYRMHPTISRFPSNQFYKDRLLD-GDNVKSLVYNQHNFHSDIKYGPIRFYDVID 1853
Query: 677 CDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E G S N+ E++ V +I KL ++ E + G+ITPY+ Q +IK+ + ++
Sbjct: 1854 SKEESGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFN 1912
Query: 736 MP-DVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSL 794
P +++ T++ QG E+++II+S VRS +R +GFLS+ RR NVA+TRA+
Sbjct: 1913 YPLNIETSTIDGVQGSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFG 1962
Query: 795 LIIVGNPHIV 804
L ++GN ++
Sbjct: 1963 LFVIGNSKLL 1972
Score = 44 (20.5 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 351 NVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRS 389
++S N IN+ ++Y + P P+ STK S
Sbjct: 414 SISIQSNFINLCKLYNKCLGIASPLPTKALPTPSTKSSS 452
Score = 43 (20.2 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 52 FVQGKPQSILVGETSKCSITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDP 110
F P S + ++ SI+ Q+T P V + + P LT+ L P P P
Sbjct: 57 FYTTPPTSDVATPSTVSSISTQSTAPPTVPI-SSKSTMPLPPPPLTMPLPPSPPTMPLP 114
Score = 42 (19.8 bits), Expect = 9.0e-27, Sum P(4) = 9.0e-27
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 353 SFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSI 390
SF Y R+ +++++ ++ E L+ S + R+I
Sbjct: 333 SFLYQRLILKKLFTGDKSITADEKQKLYDQLSAQNRTI 370
Score = 41 (19.5 bits), Expect = 3.2e-26, Sum P(5) = 3.2e-26
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 215 GSNYKLPEFPIPNDVRESLANKI 237
GS K+P F + N + L +K+
Sbjct: 1275 GSTLKIPSFKLLNSEKLGLISKL 1297
Score = 41 (19.5 bits), Expect = 3.2e-26, Sum P(5) = 3.2e-26
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 224 PIPNDVRESLANKILPQFLVE--GLVRKNYFSFFST 257
P P +E L+N +P +++ + K FS F+T
Sbjct: 821 PTPTTPKELLSN--IPTVILKKPSNIEKQIFSLFNT 854
Score = 38 (18.4 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 722 QQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRST-------VKHNEFDRTYC 774
++V ++ D P+ + + + Q +E I ST+ +KH+ F Y
Sbjct: 2096 EEVFDTNNLVIDKDFPNALINIIIELQKSNQEKIDQSTLSKKKKLRDNFIKHSRFLDPYL 2155
Query: 775 LGFLSN 780
L+N
Sbjct: 2156 KKVLNN 2161
Score = 38 (18.4 bits), Expect = 3.2e-26, Sum P(5) = 3.2e-26
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 259 LVMEELRLEEDMRCHSMECVTMRRKGAHLLALD 291
L++EE R + + + +E V++ + L+ LD
Sbjct: 1397 LIVEEYRAQLEGDFNEIEGVSISEQDGTLIGLD 1429
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(5) = 3.2e-11
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 442 VYSTREHSRILVCAASNSAADHMLERLISNEV 473
++S RE S LV N LE + N++
Sbjct: 1439 IHSFRELSEDLVAIKFNIKVKDELEEIYLNDI 1470
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 365 (133.5 bits), Expect = 5.7e-27, Sum P(3) = 5.7e-27
Identities = 125/428 (29%), Positives = 202/428 (47%)
Query: 349 LYNVSFTYNRINMRRMYQAVQAAEN---LEPNLLFPSQ------STKRRSIKAA-PFVPF 398
LY + + N I R A++ N L +L PS+ S+KR +I + +
Sbjct: 1182 LYFIKVS-NCITFIRELNAIKDFRNSGILFDQILQPSRKDHDILSSKRMAIPSLLRSMCI 1240
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN 458
LN Q S+E L KG +I GPPGTGKT T+ + + + +ILVC S+
Sbjct: 1241 QELNTSQFNSIETSLSTKGIT--LIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSH 1298
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG 518
++ D + +R ++ G+ L E++ D F ++ + +++
Sbjct: 1299 ASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDCHSISIFNKT--QREKSDSIY 1356
Query: 519 RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTV-VVLAG 577
R I+ ST S R + I +DE+ Q++EP S+IP LC ++L G
Sbjct: 1357 RASIVFSTLSGSGSETVKNNFRADI--ILVDESTQSTEPSSIIP---LCIGNIEKLILVG 1411
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSK 637
DP QL P I+S ++ GL S ERL + V L YR HP I PS
Sbjct: 1412 DPLQLPPTIFSTESAENGLNISLFERLSKVL--------PVEMLHVQYRMHPTISRFPSN 1463
Query: 638 LFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKV 696
FY LL D+ SL + + + + P+ F+ + E G S N+ E++ V
Sbjct: 1464 QFYRDRLLD-GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNKLEITMV 1521
Query: 697 VDIINKL-RENTELNETDIGVITPYRQQVLKIKKVLETWDMP-DVKVGTVEQFQGQEREV 754
+I KL ++ E + G+ITPY+ Q +IK+ + ++ P +++ T++ FQG E+++
Sbjct: 1522 FTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQGSEKDI 1581
Query: 755 IIVSTVRS 762
II+S VRS
Sbjct: 1582 IILSCVRS 1589
Score = 235 (87.8 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 62/183 (33%), Positives = 102/183 (55%)
Query: 625 YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGN 683
YR HP I PS FY LL D+ SL + + + + P+ F+ + E G
Sbjct: 1451 YRMHPTISRFPSNQFYRDRLLD-GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGK 1509
Query: 684 NPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLKIKKVLETWDMP-DVKV 741
S N+ E++ V +I KL ++ E + G+ITPY+ Q +IK+ + ++ P +++
Sbjct: 1510 R-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIET 1568
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
T++ FQG E+++II+S VRS +R +GFLS+ RR NVA+TRA+ L ++GN
Sbjct: 1569 STIDGFQGSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFGLFVIGNS 1618
Query: 802 HIV 804
++
Sbjct: 1619 KLL 1621
Score = 50 (22.7 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 458 NSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPT 496
NS ++ +L+ NE+ + +NE + +N++S P PT
Sbjct: 909 NSERLTLISKLLFNEIYQLIKNEKVLINSSSTP-TPTPT 946
Score = 40 (19.1 bits), Expect = 2.1e-26, Sum P(4) = 2.1e-26
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 216 SNYKLPEFPIPNDVRESLANKIL 238
S K+P F + N R +L +K+L
Sbjct: 898 SAIKIPTFKLLNSERLTLISKLL 920
Score = 39 (18.8 bits), Expect = 5.7e-27, Sum P(3) = 5.7e-27
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 318 DAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLE-P 376
D K +IY++ +D L F EF + + + RI + Q L+
Sbjct: 392 DIIKRNIYQLYSDYSNLNFLIEFSFFFKRLTSNRIQKIRGRIEIETSVQFEMPISFLDIE 451
Query: 377 NLLFPSQSTK 386
+FPS+ K
Sbjct: 452 KCIFPSKLKK 461
Score = 38 (18.4 bits), Expect = 5.7e-27, Sum P(3) = 5.7e-27
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 50 FPFVQGKPQSILVGETSK 67
FP Q K Q +L+ +SK
Sbjct: 318 FPTFQSKIQEVLLKSSSK 335
Score = 37 (18.1 bits), Expect = 2.1e-26, Sum P(4) = 2.1e-26
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 259 LVMEELRLEEDMRCHSMECVTMRRKGAHLLALD 291
L++EE R + +E V++ K L+ LD
Sbjct: 1038 LIVEEYRKQLAGEFDEIEGVSISEKDGTLIGLD 1070
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 318 (117.0 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 104/291 (35%), Positives = 151/291 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
I+ +T SS + + G F + +DEA QASE + P+A + VL GDP+Q
Sbjct: 755 IVFTTVSSSGRKLFSRLTHG-FDMVVIDEAAQASEVGVLPPLALGAAR---CVLVGDPQQ 810
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVR-NYRCHPAILDLPSKLFY 640
L + SK A T +S ER F+ G T L+ YR HP I D PS+ FY
Sbjct: 811 LPATVISKAAGTLLYSRSLFER-FQLA-------GCPTLLLTVQYRMHPQIRDFPSRYFY 862
Query: 641 GGELLACKDDATSLSSAKVDIFPNKD---FPVLFFGIQ-GCDEREGNNPSWFNRFEVSKV 696
G L D+ S+SSA +I+ KD P LFF I G + G + S+ N E
Sbjct: 863 QGRL----KDSESISSAPDEIY-YKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFC 917
Query: 697 VDI---INKLRENTELNETDIGVITPYRQQVLKIK----KVLETWDMPDVKVGTVEQFQG 749
V + + K ++ + +GVITPY+ Q+ +K L ++ ++ + TV+ FQG
Sbjct: 918 VGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQG 977
Query: 750 QEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
QER+VII+S VR++ H +GF+S+ RR NVA+TRAR L ++GN
Sbjct: 978 QERDVIIMSCVRAS-GHG-------VGFVSDIRRMNVALTRARRALWVMGN 1020
Score = 61 (26.5 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 450 RILVCAASNSAADHMLERLI 469
R+LVCA SN+A D +L R++
Sbjct: 580 RMLVCAPSNAATDELLSRVL 599
Score = 56 (24.8 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 414 GCKGAPPY---VIYGPPGTGKTMTL 435
G K P+ ++ GPPGTGKT T+
Sbjct: 488 GVKKQEPWPFTLVQGPPGTGKTHTV 512
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 276 (102.2 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 99/306 (32%), Positives = 148/306 (48%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKR-GNFSHIFLDEAGQASEPESMIPIANLCTKQTV 572
+E L +++ +T + ++ I+R F + +DEAGQ+ EP IPI L K+ +
Sbjct: 635 KEILSNAQVVFATNIGAA---DPLIRRLETFDLVVIDEAGQSIEPSCWIPI--LQGKRCI 689
Query: 573 VVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAIL 632
L+GDP QL PV+ S+ A GLG S LER D TKL YR + I
Sbjct: 690 --LSGDPCQLAPVVLSRKALEGGLGVSLLERAASLH-----DGVLATKLTTQYRMNDVIA 742
Query: 633 DLPSKLFYGGELLACKDDATSL--SSAKVDIFPNKDFPVLFFGIQ--------GCDER-- 680
SK YGG L + A+ L S V P++ + GC+ER
Sbjct: 743 GWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLDTRMPYGSLSVGCEERLD 802
Query: 681 EGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPD-V 739
S +N E VV+ + L ++ I V +PY QV +++ L+ + + D V
Sbjct: 803 PAGTGSLYNEGEADIVVNHVISLIY-AGVSPMAIAVQSPYVAQVQLLRERLDDFPVADGV 861
Query: 740 KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVG 799
+V T++ FQG+E + +I+S VRS N +GFL + RR NVAITRAR + +V
Sbjct: 862 EVATIDSFQGREADAVIISMVRS----NNLG---AVGFLGDSRRMNVAITRARKHVAVVC 914
Query: 800 NPHIVC 805
+ +C
Sbjct: 915 DSSTIC 920
Score = 118 (46.6 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 397 PFNSLNEEQTRSVEIILGC-KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCA 455
P + L + R I LG K P ++ GPPGTGKT L E I + ++ R+LV A
Sbjct: 482 PVSKLFDSSQRRA-IALGVNKKRPVMIVQGPPGTGKTGMLKEVI--TLAVQQGERVLVTA 538
Query: 456 ASNSAADHMLERLI 469
+N+A D+M+E+L+
Sbjct: 539 PTNAAVDNMVEKLL 552
Score = 41 (19.5 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 271 RCHSM-ECVTMRRKGAHLLALDVPGLAERRPSL 302
R H + + +T R L+ L GL ++ PS+
Sbjct: 417 RIHGLADALTYERNCEALMLLQKNGLQKKNPSI 449
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 309 (113.8 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 100/292 (34%), Positives = 151/292 (51%)
Query: 522 IIISTYMSSS--LLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
I+ +T +S LL G+ F + +DEA QA E S+IP+ C V+ GDP
Sbjct: 1490 IVCATLSASGHELLLNAGL---TFRTVIIDEAAQAVELSSIIPLKYGCES---CVMVGDP 1543
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
QL P + SK + FG +S R+F+ ++ + + + YR +P I PSK F
Sbjct: 1544 NQLPPTVLSKTSAKFGYSQSLYVRMFK----QHNESACLLSI--QYRMNPEISRFPSKFF 1597
Query: 640 YGGELLACKDDATSLSSAKVDIFPNKDFPVL----FFGIQGCDEREGNNPSWFNRFEVSK 695
Y +LL D ++S+ V P + P L FF + G E N+ S +N E S
Sbjct: 1598 YNSKLL----DGPNMSA--VTSRPWHEDPQLGIYRFFNVHGT-EAFSNSKSLYNVEEASF 1650
Query: 696 VVDIINKLRENTELN---ETDIGVITPYRQQVLKIKKVLE----TWDMPDVKVGTVEQFQ 748
++ + +L + LN E IGV+TPYR QV +++ + + + + TV+ FQ
Sbjct: 1651 ILLLYERLIQ-CYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQ 1709
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
GQE+++II S VRS++ +GFL + RR NVA+TRA+S L IVGN
Sbjct: 1710 GQEKDIIIFSCVRSSMSGG-------IGFLQDLRRLNVALTRAKSSLYIVGN 1754
Score = 86 (35.3 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 422 VIYGPPGTGKTMTL---VEAILQVYS----------TREHSR--ILVCAASNSAADHMLE 466
+I GPPGTGKT T+ + A+L S TR+ S+ IL+CA SN+A D +L
Sbjct: 1290 LIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTSKNKILICAPSNAAIDEILL 1349
Query: 467 RLISNEVAGIKENE 480
R+ AG+ ++E
Sbjct: 1350 RI----KAGVYDHE 1359
Score = 39 (18.8 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 EFPIPNDVRESLANKIL 238
+F +P R++ NKIL
Sbjct: 1319 QFNVPGQTRKTSKNKIL 1335
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 303 (111.7 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 91/290 (31%), Positives = 150/290 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
+I T +S L RG FS + +DEAGQ+ E E++ P+ + C K ++L G
Sbjct: 2173 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LILVG 2229
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFEC--EFYRNGDEGY--VTKLVRNYRCHPAILD 633
DPKQL P + S A+ +G +S + R ++ + + G V +L YR HP I
Sbjct: 2230 DPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICL 2289
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEV 693
PS Y L + T+ S+ +P + P L F + ER N+ S+ N E+
Sbjct: 2290 FPSNYVYNRSLKTNRQTETNRCSSD---WPFQ--PYLVFDVGDGSERRDND-SYVNVQEI 2343
Query: 694 SKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPD-VKVGTVEQFQGQ 750
V++II +++ ++ +IG+IT Y+ Q I+K L+ +D +V TV+ FQG+
Sbjct: 2344 KLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGR 2403
Query: 751 EREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+++ +IV+ VR+ +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2404 QKDCVIVTCVRANAMQGS------IGFLASLQRLNVTITRAKYSLFILGH 2447
Score = 93 (37.8 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTRE---HS-----------RILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ + + HS R+LVCA SN+A D ++++
Sbjct: 1983 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2042
Query: 468 LI 469
+I
Sbjct: 2043 II 2044
Score = 46 (21.3 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 245 GLVRKNYFSFFSTLLVMEELRLEEDMRCHSMECVTMRRK 283
G+ ++ +++ + E + ++ C+ +ECVT K
Sbjct: 18 GISTVDFLQRYASKIYSSEFQTADEDLCYCLECVTEYHK 56
Score = 40 (19.1 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 286 HLLALDVPGLAE---RRPSLVHGDFVFVKLAAANADAKKG-SIYRVEADEVILKFAKE 339
H + D+P + RR + D +L+ A + G I R E DE I K +KE
Sbjct: 2090 HRMKKDLPSHVQEMHRRKEFL--DRQLDELSRQRALCRGGREIQRQELDEKIAKVSKE 2145
Score = 38 (18.4 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 142 KEMGLHKSVVQFDIGDD 158
+EM SV+Q DIG D
Sbjct: 391 EEMETLASVLQSDIGQD 407
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 308 (113.5 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 95/291 (32%), Positives = 151/291 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
II T +S L RG FS + +DEAGQ+ E E++ P+ + C K +VL G
Sbjct: 2140 IICCTLSTSGGLLLEAAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LVLVG 2196
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFEC--EFYRNGDEGY--VTKLVRNYRCHPAILD 633
DPKQL P + S A+ +G +S + R + E + G V +L YR HP I
Sbjct: 2197 DPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICL 2256
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI-QGCDEREGNNPSWFNRFE 692
PS Y G L + TS S+ +P + P L F + G + R+ N S+ N E
Sbjct: 2257 FPSSYIYDGILRTNRGTETSRCSSD---WPFQ--PYLVFDVGDGLERRD--NDSYVNVQE 2309
Query: 693 VSKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPDV-KVGTVEQFQG 749
+ V+++I +++ ++ +IG+IT Y+ Q I+K L+ +D +V TV+ FQG
Sbjct: 2310 IKLVMELIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGAAEVDTVDAFQG 2369
Query: 750 QEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
++++ +IV+ VR+ +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2370 RQKDCVIVTCVRANATQGS------IGFLASLQRLNVTITRAKYSLFILGH 2414
Score = 92 (37.4 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQV--------YSTR------EHSRILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ YS + +R+LVCA SN+A D ++++
Sbjct: 1950 LIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2009
Query: 468 LI 469
+I
Sbjct: 2010 II 2011
Score = 41 (19.5 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 138 SCKPKEMGLHKSVVQ-FDIGDDRFERMVLLLAEDSVSRSLASNRPYS 183
SC P+ L + FD G R++ + + DS+ + AS+ +S
Sbjct: 723 SCTPQNGTLRNGPEKVFDRGIIISRRLLTVSSTDSLEKVSASDEDFS 769
Score = 37 (18.1 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 267 EEDMRCHSMECVTMRRK 283
+ED+ C+ +ECV K
Sbjct: 34 DEDL-CYCLECVAEYHK 49
Score = 37 (18.1 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 129 PLRTLTIWLSCKPKEMGLH---KSVVQFDIGDDRFERMVLL-LAEDSVSRSLASNRPYSR 184
P ++W KP + K+ +GD + + V + +A N
Sbjct: 1084 PCEVFSVWHDQKPDKNSAQENEKNPCSTHVGDSANDLGYETDYVPEEVIKKVAENFEERT 1143
Query: 185 VPRKMQSAVDEY 196
PR ++V+E+
Sbjct: 1144 KPRSSSTSVEEF 1155
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 305 (112.4 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 96/292 (32%), Positives = 150/292 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
+I T +S L RG FS + +DEAGQ+ E E++ P+ + C K ++L G
Sbjct: 2126 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNK---LILVG 2182
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDE----GY--VTKLVRNYRCHPAI 631
DPKQL P + S A+ +G +S + R C+ E G V +L YR HP I
Sbjct: 2183 DPKQLPPTVISMKAQEYGYDQSMMARF--CKLLEENVEQNMIGRLPVLQLTIQYRMHPDI 2240
Query: 632 LDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRF 691
PS Y L K + + S +P + P L F + ER N+ S+ N
Sbjct: 2241 CLFPSNYVYNKNL---KTNRLTESIRCSSEWPFQ--PYLVFDVGDGSERRDND-SYINVQ 2294
Query: 692 EVSKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPD-VKVGTVEQFQ 748
E+ V++II ++E +++ +IG+IT Y+ Q I+K LE +D +V TV+ FQ
Sbjct: 2295 EIKLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQ 2354
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
G++++ IIV+ VR++ +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2355 GRQKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILGH 2400
Score = 93 (37.8 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTRE---HS-----------RILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ + + HS R+LVCA SN+A D ++++
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 468 LI 469
+I
Sbjct: 1996 II 1997
Score = 43 (20.2 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 24/111 (21%), Positives = 47/111 (42%)
Query: 69 SITIQNTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDPQKDQGFLEGFSI--EDRV 126
S +I +T + V W +++ + SL + S +P P + Q E F++ +
Sbjct: 1675 SQSIFDTFIKEVLKWKYQMFLNFDKCGAPTSLCQSIS-RPVPVRFQDCAEYFNVFLPLII 1733
Query: 127 LQPLRTLTI-WLSCKPKEMGLHKSVVQFDIGDDRFERMVLLLAEDSVSRSL 176
L T+ WLS KE + +F ++ ++ L E +++ L
Sbjct: 1734 LNAFETVAQEWLSSPNKENFYQLQLRKFPADYKKYWEFLIYLNESELAKQL 1784
Score = 39 (18.8 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 457 SNSAADHMLERLISNEVAGIKENEILRLNATSRP 490
++S++D M + SNE +K+ + TS+P
Sbjct: 745 TDSSSDFMEQVSTSNEDVSLKDGSV---GKTSKP 775
Score = 38 (18.4 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 462 DHMLERLISNEVAGIKEN 479
D + E ++ N+ G+KE+
Sbjct: 1114 DSVSEEVVRNKAEGVKEH 1131
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 339 (124.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 136/479 (28%), Positives = 229/479 (47%)
Query: 307 FVFVKLAAANADAKKGSIYRVE-ADEVILKFAKEFHTQHRNGSLYNVSFTYNRI-NMRRM 364
F F + ++ +GS+++ +++ F T+ N S + S YN+I N
Sbjct: 1091 FTF-GIVRKTSNLMQGSLHQQSIVCDLLYSNPTHFFTKSLNSSTQS-SIHYNKISNSVTF 1148
Query: 365 YQAVQA--AENLEPNLLF-P--SQSTKRRSIKAAPFVPF---NSLNEEQTRSVEIILGCK 416
+++Q A NL+F P + + ++ +K P + LNE Q +++ L
Sbjct: 1149 IRSIQEFKASPFIKNLIFNPGCNNNLNQKMMKFPPTLETICKEKLNESQLNAIKSSLVES 1208
Query: 417 GAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGI 476
G +I GPPGTGKT T+ + + + + +ILVC S+++ D + +R + N +
Sbjct: 1209 GIT--LIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASVDEVAKRCLKNLLNS- 1265
Query: 477 KENEILRLNA--TSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLN 534
+ +I + N T R + P C + I + + R +I S + S L
Sbjct: 1266 -DGQIFKPNMVRTGRKEKISPE-----C---QKI-SLKNKNSSRRINLIKSASIVFSTLA 1315
Query: 535 TNGIKR--GNFSH--IFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD 590
+G K NFS + +DE+ Q+SEP S+IP++ K+ ++L GDP QL P I+SK
Sbjct: 1316 GSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKK--LILVGDPVQLPPTIFSKQ 1373
Query: 591 AETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKD- 649
GL S ERL ++ D V L YR HP S+ FY G L ++
Sbjct: 1374 GADCGLKISLFERLA-----KSID---VQFLNTQYRMHPVTSKFISEEFYNGTLKDGENV 1425
Query: 650 DATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLREN-TE 708
S ++ K P+ P+ FF + +++ S N+ E+ KV +I +L E E
Sbjct: 1426 SIDSYNNCKFHFDPSFG-PMKFFDLPKSNQKVIKK-SIMNQDEIDKVFTLIKELIEKYPE 1483
Query: 709 LNETDIGVITPYRQQVLKIKKVLETWDMPD--VKVGTVEQFQGQEREVIIVSTVRSTVK 765
+ G+ITPY+ Q+ +IK+ L + + + V T++ QG E+++II+S VRS K
Sbjct: 1484 CKKLSFGIITPYKLQMNQIKEQLNRSEHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEK 1542
Score = 303 (111.7 bits), Expect = 3.4e-21, Sum P(3) = 3.4e-21
Identities = 98/296 (33%), Positives = 154/296 (52%)
Query: 519 RYRIIISTYMSSSLLNTNGIKR--GNFSH--IFLDEAGQASEPESMIPIANLCTKQTVVV 574
R +I S + S L +G K NFS + +DE+ Q+SEP S+IP++ K+ ++
Sbjct: 1300 RINLIKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKK--LI 1357
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDL 634
L GDP QL P I+SK GL S ERL ++ D V L YR HP
Sbjct: 1358 LVGDPVQLPPTIFSKQGADCGLKISLFERLA-----KSID---VQFLNTQYRMHPVTSKF 1409
Query: 635 PSKLFYGGELLACKD-DATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEV 693
S+ FY G L ++ S ++ K P+ P+ FF + +++ S N+ E+
Sbjct: 1410 ISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFG-PMKFFDLPKSNQKVIKK-SIMNQDEI 1467
Query: 694 SKVVDIINKLREN-TELNETDIGVITPYRQQVLKIKKVLETWDMPD--VKVGTVEQFQGQ 750
KV +I +L E E + G+ITPY+ Q+ +IK+ L + + + V T++ QG
Sbjct: 1468 DKVFTLIKELIEKYPECKKLSFGIITPYKLQMNQIKEQLNRSEHHNLNISVSTIDGVQGS 1527
Query: 751 EREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
E+++II+S VRS K + +GFLS+ RR NVA+TRA+ L ++G ++ +
Sbjct: 1528 EKDIIIMSCVRSIEK-------FGIGFLSDRRRINVALTRAKLGLYVIGTYKVLAK 1576
Score = 45 (20.9 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 120 FSIEDRV-LQPLRTLTIWLSCKPKEMGLHK 148
+S D + + P TL + LSC+P ++ L K
Sbjct: 953 YSYVDVISISPDETLNLILSCEPSKIPLLK 982
Score = 41 (19.5 bits), Expect = 3.4e-21, Sum P(3) = 3.4e-21
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 421 YVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLER-LISNEVAGIKEN 479
+ + G GT T +V + H + +VC S H + L S+ + I N
Sbjct: 1081 FKVIGLDGTKFTFGIVRKTSNLMQGSLHQQSIVCDLLYSNPTHFFTKSLNSSTQSSIHYN 1140
Query: 480 EI 481
+I
Sbjct: 1141 KI 1142
Score = 40 (19.1 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 343 QHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIK 391
+H+ +++ +N+I +R+ + ++ LE +F S K SI+
Sbjct: 336 KHQKAITHDLIILFNKIKCKRVSKKEKSFNRLE---MFLSNKFKDSSIQ 381
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 307 (113.1 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 94/290 (32%), Positives = 149/290 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
II T +S L RG FS + +DEAGQ+ E E++ P+ + C K +VL G
Sbjct: 2144 IICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LVLVG 2200
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFEC--EFYRNGDEGY--VTKLVRNYRCHPAILD 633
DPKQL P + S A+ +G +S + R ++ E + G + +L YR HP I
Sbjct: 2201 DPKQLPPTVISMKAQDYGYDQSMMARFYKLLEENVEHNVIGRLPILQLTVQYRMHPDICL 2260
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEV 693
PS Y L + T S D +P + P L F + ER N+ S+ N E+
Sbjct: 2261 FPSNYIYNRNLKT--NSLTEASRCSSD-WPFQ--PYLVFDVGDGSERRDND-SYVNVQEI 2314
Query: 694 SKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPD-VKVGTVEQFQGQ 750
V++II +++ ++ +IG+IT Y+ Q I+K L+ +D +V TV+ FQG+
Sbjct: 2315 KLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTLIQKDLDKEFDRKGPAEVDTVDGFQGR 2374
Query: 751 EREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+++ +IV+ VR+ +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2375 QKDCVIVTCVRAKTSQGS------IGFLASLQRLNVTITRAKYSLFILGH 2418
Score = 94 (38.1 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYST---REHS-----------RILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ + R HS R+LVCA SN+A D ++++
Sbjct: 1954 LIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2013
Query: 468 LI 469
+I
Sbjct: 2014 II 2015
Score = 39 (18.8 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 59 SILVGETSKCSITIQNTTPEPVEV 82
S++ S+CS++IQ PV +
Sbjct: 1842 SVMRSGKSECSLSIQTQDKLPVNL 1865
Score = 38 (18.4 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 267 EEDMRCHSMECVTMRRKGAHLLALDVPGLAE 297
+ED+ C+ +ECV K ++P L E
Sbjct: 34 DEDL-CYCLECVAEYHKARE----ELPSLHE 59
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 316 (116.3 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 96/278 (34%), Positives = 145/278 (52%)
Query: 529 SSSLLNTNGIKR-GN--FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPV 585
S S++ N +R G+ FS + +DEA QA E E++IP+ C V+L GDP QL P
Sbjct: 1938 SGSIVLENAFRRLGHEPFSCVIIDEASQAKETETLIPMLYRCPS---VILVGDPNQLPPT 1994
Query: 586 IYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELL 645
+ S+ A+ FG +S + RL + N + L YR HP I + PSK Y L
Sbjct: 1995 VVSQKAKEFGFDQSLMARLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSAL- 2053
Query: 646 ACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRE 705
K+D + +P K + V F + G + +E + S+ N EVS +V ++ KL
Sbjct: 2054 --KNDCETAQKRCSLSWPFKPYKV-FDVMDGRETKERD--SFINHKEVS-LVGLLLKLLC 2107
Query: 706 NTELNETDIGVITPYRQQVLKIKKVLETWDMP---DVKVGTVEQFQGQEREVIIVSTVRS 762
+ +GVITPY Q +I ++T + V+V TV+ FQG+E + IIVS VR+
Sbjct: 2108 KEQA--VRVGVITPYNAQKHRILDAIKTSGINKQLQVEVDTVDGFQGREMDCIIVSCVRA 2165
Query: 763 TVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+ + +GF+ N +R NV ITRA+ L I+G+
Sbjct: 2166 SSEMGS------IGFVGNRQRMNVTITRAKFSLFILGH 2197
Score = 82 (33.9 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 422 VIYGPPGTGKTMT---LVEAILQ-----------VYSTREHSRILVCAASNSAADHMLER 467
+I+GPPGTGK+ T L+ +L ++S +R+L+CA SN+A D ++++
Sbjct: 1741 LIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKK 1800
Query: 468 LI 469
+I
Sbjct: 1801 VI 1802
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 17 GEKREIGFIDFQDDHSVLSYDPS 39
G++ EI I+ + VL + PS
Sbjct: 88 GDEDEIYIIEGDHEQPVLKFSPS 110
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 308 (113.5 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 96/294 (32%), Positives = 153/294 (52%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
L +++ ST +S S + F + +DEA Q E ++IP+ C K ++
Sbjct: 1510 LSEAQVLCST-LSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRYGCKK---CIMV 1565
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GDP QL P + S+ A ++ +S R+ + + D Y+ + YR HP I PS
Sbjct: 1566 GDPNQLPPTVLSQAAASYNYEQSLFVRMQK----NHPDSVYMLDV--QYRMHPMISKFPS 1619
Query: 637 KLFYGGELLACKDDATSLSSAKVDIFP-NKDFPVL---FFGIQGCDEREGNNPSWFNRFE 692
FY +L KD L +++ P +KD P+ FF I G E+ S FN E
Sbjct: 1620 SEFYNSKL---KDGDGML---ELNTRPWHKDPPLTPYRFFDILGKHEKNELTRSLFNTDE 1673
Query: 693 VSKVVDIINKLRENTELNETD--IGVITPYRQQVLKIKKV-LETWDMP---DVKVGTVEQ 746
+ + +KL + ++ IG+I+PY++Q+ KIK+V + + P ++ TV+
Sbjct: 1674 AIVALQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDG 1733
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
FQGQE+E+II+S VR++ N +GFLS+ RR NVA+TRA++ L I+GN
Sbjct: 1734 FQGQEKEIIIMSCVRASATGN-------VGFLSDVRRMNVALTRAKTTLWILGN 1780
Score = 75 (31.5 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
+N+ Q R++ +G +I GPPGTGKT T++ + S ++++++ + S S+
Sbjct: 1297 VNDSQARAIMGTFKSEGFS--LIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISGSGSS 1354
Score = 57 (25.1 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 447 EHSRILVCAASNSAADHMLERL 468
+ ++IL+CA SN+A D ++ RL
Sbjct: 1359 DKAKILICAPSNAAVDELVLRL 1380
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 341 (125.1 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 108/395 (27%), Positives = 188/395 (47%)
Query: 374 LEPNLLFPSQSTKRR-SIKAAPFVPFN-SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGK 431
L+P + +QS K R I +N +LNE Q ++ L +I GPPGTGK
Sbjct: 3527 LKPTIEAYNQSGKDRWEIPTLLKDHYNQTLNESQLAAINESLVHSSIT--LIQGPPGTGK 3584
Query: 432 TMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPY 491
T T+ I + + +ILVC S++A D + +R+I + + + +
Sbjct: 3585 THTITSLISIILAINPDFKILVCGPSHAAVDEVAKRVIIKGLLNDRGEKYIPTMVRIGLK 3644
Query: 492 EDVPTDFIR-FCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDE 550
+++ + C F + + + L I ST +S + N + +DE
Sbjct: 3645 DNIQDPIVHDICVFNRRLDE--KKMILEHSSICFSTLSASGSNLVQSSFKPNV--VIVDE 3700
Query: 551 AGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFY 610
A Q+ E +IP++ ++L GDP QL P I+SK++ GLG S ERL +
Sbjct: 3701 ATQSCETSCIIPLSLGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVL-- 3758
Query: 611 RNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVL 670
V+ L YR HP I PS FY ++L D+ S + + N+D+ +
Sbjct: 3759 ------PVSMLNVQYRMHPLISKFPSSQFYH-DILKDGDNVVSSDAYSLRFHENQDYGAI 3811
Query: 671 -FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLKIK 728
FF + E G S N+ E++ V +I KL +++ E + G++TPY+ Q +I+
Sbjct: 3812 RFFDVTDSREERGKT-SIKNQLEITMVFTLIKKLTQDHPETKQYSFGIVTPYKLQRKEIE 3870
Query: 729 KVLETWDMP-DVKVGTVEQFQGQEREVIIVSTVRS 762
+ ++ ++++ T++ FQG E++++I+S VR+
Sbjct: 3871 DAYKQLNLSLNIEIKTIDSFQGSEKDIMIMSCVRN 3905
Score = 236 (88.1 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 61/186 (32%), Positives = 103/186 (55%)
Query: 618 VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVL-FFGIQG 676
V+ L YR HP I PS FY ++L D+ S + + N+D+ + FF +
Sbjct: 3760 VSMLNVQYRMHPLISKFPSSQFYH-DILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTD 3818
Query: 677 CDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E G S N+ E++ V +I KL +++ E + G++TPY+ Q +I+ + +
Sbjct: 3819 SREERGKT-SIKNQLEITMVFTLIKKLTQDHPETKQYSFGIVTPYKLQRKEIEDAYKQLN 3877
Query: 736 MP-DVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSL 794
+ ++++ T++ FQG E++++I+S VR NE +GFLS+ RR NV+ITRA+
Sbjct: 3878 LSLNIEIKTIDSFQGSEKDIMIMSCVR-----NE-----SIGFLSDRRRINVSITRAKYG 3927
Query: 795 LIIVGN 800
L I+GN
Sbjct: 3928 LFIIGN 3933
Score = 48 (22.0 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 357 NRINMRRMYQAVQAAENLEPNLL----FPSQSTKRRSIKAAPFVPFNSLNEE 404
+RINM + + + E + L + TK IK V F S NEE
Sbjct: 3383 DRINMNQS-MTIHSLEEISEECLNVTFYLRHKTKDEEIKINDLVLFKSFNEE 3433
Score = 46 (21.3 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 430 GKTMTLVEAILQVY----STREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLN 485
GK +T+VE I+ Y E+++ V A S D E+ +A IK+ N
Sbjct: 19 GKMVTIVEDIISKYPDFNDELENAKY-VLAESKDEQDRTFEQ----RIAAIKKKAFDDFN 73
Query: 486 ATSRPYEDVPTDF 498
S E DF
Sbjct: 74 ELSESDEASQLDF 86
Score = 43 (20.2 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 24/112 (21%), Positives = 42/112 (37%)
Query: 257 TLLVMEELRLEEDMRCHSME-----CVTMRRKGAHLLA---LDVPGLAERRPSLVHGDFV 308
T+ ++ + + + M HS+E C+ + H + + L + G +
Sbjct: 3378 TISNLDRINMNQSMTIHSLEEISEECLNVTFYLRHKTKDEEIKINDLVLFKSFNEEGRAI 3437
Query: 309 FVKLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRIN 360
F N KGS RV + +F HT+ LY++S N N
Sbjct: 3438 FALARTVNHGYMKGSSQRV-----VCQFIISQHTRALIEKLYSLSLVKNNNN 3484
Score = 42 (19.8 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 524 ISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLG 583
IS+ +SSSL N N K N S IF +S P I ++ T ++ +L + ++
Sbjct: 2483 ISSTLSSSLSNNNN-KNNNNS-IF------SSFPPMQISSSSPTTTSSIQILPTNGVKVA 2534
Query: 584 P 584
P
Sbjct: 2535 P 2535
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 341 (125.1 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT I + + +IL A SN AA++++E L + ++
Sbjct: 1795 LVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNLVEGLKKRNIQAVR---- 1850
Query: 482 LRLNATSRPYEDVPTDFIRFCFF----------EESIFKCPP-REALGRYRIIISTYMSS 530
+ + S +E+ +F R+ E + K EA+ +Y ++I+T + S
Sbjct: 1851 VGAGSDSDFHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGS 1910
Query: 531 SLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD 590
+ K F + +DE Q+ EP ++IP+ + C +VL GD KQL P I S D
Sbjct: 1911 GHEIFDNEK---FERVIIDECAQSIEPSNLIPLGHYCNN---LVLIGDHKQLPPTIISPD 1964
Query: 591 AETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDD 650
A GL KS LER + V L R H +I P+ FY +L
Sbjct: 1965 AIKLGLDKSLLERFVMAKI------APVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVT 2018
Query: 651 ATSLSSAKVDIFPNKDFPVLFFGIQ----GCDEREGNNPSWFNRFEVSKVVDIINKLREN 706
+ K ++PN + F + G S FN +E+ ++ ++ +
Sbjct: 2019 EENRPIIKGFLWPNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE 2078
Query: 707 TELNETDIGVITPYRQQVLKIKKVLE---TWDMPD-VKVGTVEQFQGQEREVIIVSTVRS 762
++ +IG++T Y Q +K+KK ++ +++ +++ +++ FQG+E+++I+ S VRS
Sbjct: 2079 GCVSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRS 2138
Query: 763 TVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+NE LGFL + RR NV +TRA+ +I+ G+
Sbjct: 2139 NA-NNE------LGFLRDARRLNVMLTRAKRGVILFGD 2169
Score = 41 (19.5 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 333 ILKFAKEFHTQHRNGSLYNVSFTYNRINMRRM 364
IL A + H H N ++ N++ N NM M
Sbjct: 1091 ILTSATDIH--HNNNNVNNMNNMNNMNNMNNM 1120
Score = 38 (18.4 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 350 YNVSFTYNRINMRRMYQAVQAAENLE 375
YN +FT N N+ V + +N++
Sbjct: 367 YNENFTNNIKNVNNANTGVNSLKNMK 392
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 341 (125.1 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT I + + +IL A SN AA++++E L + ++
Sbjct: 1795 LVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNLVEGLKKRNIQAVR---- 1850
Query: 482 LRLNATSRPYEDVPTDFIRFCFF----------EESIFKCPP-REALGRYRIIISTYMSS 530
+ + S +E+ +F R+ E + K EA+ +Y ++I+T + S
Sbjct: 1851 VGAGSDSDFHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGS 1910
Query: 531 SLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD 590
+ K F + +DE Q+ EP ++IP+ + C +VL GD KQL P I S D
Sbjct: 1911 GHEIFDNEK---FERVIIDECAQSIEPSNLIPLGHYCNN---LVLIGDHKQLPPTIISPD 1964
Query: 591 AETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDD 650
A GL KS LER + V L R H +I P+ FY +L
Sbjct: 1965 AIKLGLDKSLLERFVMAKI------APVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVT 2018
Query: 651 ATSLSSAKVDIFPNKDFPVLFFGIQ----GCDEREGNNPSWFNRFEVSKVVDIINKLREN 706
+ K ++PN + F + G S FN +E+ ++ ++ +
Sbjct: 2019 EENRPIIKGFLWPNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE 2078
Query: 707 TELNETDIGVITPYRQQVLKIKKVLE---TWDMPD-VKVGTVEQFQGQEREVIIVSTVRS 762
++ +IG++T Y Q +K+KK ++ +++ +++ +++ FQG+E+++I+ S VRS
Sbjct: 2079 GCVSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRS 2138
Query: 763 TVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+NE LGFL + RR NV +TRA+ +I+ G+
Sbjct: 2139 NA-NNE------LGFLRDARRLNVMLTRAKRGVILFGD 2169
Score = 41 (19.5 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 333 ILKFAKEFHTQHRNGSLYNVSFTYNRINMRRM 364
IL A + H H N ++ N++ N NM M
Sbjct: 1091 ILTSATDIH--HNNNNVNNMNNMNNMNNMNNM 1120
Score = 38 (18.4 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 350 YNVSFTYNRINMRRMYQAVQAAENLE 375
YN +FT N N+ V + +N++
Sbjct: 367 YNENFTNNIKNVNNANTGVNSLKNMK 392
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 274 (101.5 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 98/315 (31%), Positives = 150/315 (47%)
Query: 464 MLERLISNEVAGIKENEILRLNATSRPYE-DVPTDFIRFCFFEESIFKCPPR---EALGR 519
+ ERL E ++ NEI +LN T Y D+ F E +GR
Sbjct: 1526 LAERLKQQEDNKLR-NEITKLNYTREKYNNDLKLAKDEERRFHEQYSNTKRNLYINIIGR 1584
Query: 520 YRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
+II+ST +S S + NF + +DEA QA E ++IP+ + K +L GDP
Sbjct: 1585 SQIILST-LSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLRHDVKK---CILVGDP 1640
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
+QL P SK A F S +RL C T L YR HP I PSK+F
Sbjct: 1641 QQLPPTTISKVATKFQYEISLFQRLMNCGMAP-------TVLKTQYRMHPMISKFPSKIF 1693
Query: 640 YGGELLACKDDATSLSSAKVDIFPNKD--F-PVLFFGIQGCDEREGNNPSWF---NRFEV 693
Y GEL +D ++ K D + + F P++F+ + D+ S+F N EV
Sbjct: 1694 YRGEL----EDGKNVREYKQDYYNDSASRFGPLVFYDL--FDKHGEVRSSFFSLRNPTEV 1747
Query: 694 SKVVDIINKLREN-TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQER 752
I+++L N + +IGVITPY+ Q + + + + +V+V T++ FQG+E+
Sbjct: 1748 KLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAFKGYQ--NVEVSTIDGFQGKEK 1805
Query: 753 EVIIVSTVRSTVKHN 767
+ +I S+VR+ H+
Sbjct: 1806 DFVIFSSVRAHSGHS 1820
Score = 269 (99.8 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 79/238 (33%), Positives = 124/238 (52%)
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
+L GDP+QL P SK A F S +RL C T L YR HP I
Sbjct: 1635 ILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGMAP-------TVLKTQYRMHPMISK 1687
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKD--F-PVLFFGIQGCDEREGNNPSWF-- 688
PSK+FY GEL +D ++ K D + + F P++F+ + D+ S+F
Sbjct: 1688 FPSKIFYRGEL----EDGKNVREYKQDYYNDSASRFGPLVFYDL--FDKHGEVRSSFFSL 1741
Query: 689 -NRFEVSKVVDIINKLREN-TELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQ 746
N EV I+++L N + +IGVITPY+ Q + + + + +V+V T++
Sbjct: 1742 RNPTEVKLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAFKGYQ--NVEVSTIDG 1799
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
FQG+E++ +I S+VR+ H+ +GFLS+ RR NV +TRA+ ++I+GN ++
Sbjct: 1800 FQGKEKDFVIFSSVRAHSGHS-------IGFLSDIRRMNVGLTRAKYSMVILGNSSLL 1850
Score = 117 (46.2 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 347 GSLYNVSFTYNRINMRRMYQAVQAAENL-------EPNLLFPSQSTKRRSIKAAP--FVP 397
G+++N+ + + R Y A+ + P+L S + + K F
Sbjct: 1308 GNIWNIQKVTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKIPDKLFQK 1367
Query: 398 F-NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYST------REHS- 449
+SLNE Q ++ L G ++ GPPGTGKT T++ ++L V++T + HS
Sbjct: 1368 LRSSLNESQLSAIASTLKNLGGFS-LLQGPPGTGKTKTIL-SLLSVFTTVLTNIEKSHSD 1425
Query: 450 -RILVCAASNSAADHMLERL 468
+ILVCA SN+A D + R+
Sbjct: 1426 PKILVCAPSNAAVDEIALRI 1445
Score = 40 (19.1 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 244 EGLVRKNYFSFFSTLLVMEELRLEEDMRCHSMEC 277
E NY S++ +E+ R+ E + + +C
Sbjct: 108 EKFQHNNYIEIVSSIEKVEKTRVREHLNKYKDDC 141
Score = 38 (18.4 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 444 STREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNAT 487
ST ++V S + + E+ ++N + IKE ++ + T
Sbjct: 871 STEWFESLIVIIKSLVKSKYKFEKSLNNFIGRIKEMQLSPIQIT 914
Score = 37 (18.1 bits), Expect = 8.3e-17, Sum P(3) = 8.3e-17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 301 SLVHGDFVFVKLAAANADAKK 321
SL+ G++ A AN D KK
Sbjct: 1482 SLILGEYKDKNSAIANEDQKK 1502
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 288 (106.4 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 98/265 (36%), Positives = 140/265 (52%)
Query: 546 IFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLF 605
+ +DEA Q E ES IP+ L Q +++ GD KQL +I S A LG+S ERL
Sbjct: 556 LVIDEAAQLKECESAIPL-QLRGLQHAILI-GDEKQLPAMIKSNIASEADLGRSLFERLV 613
Query: 606 ECEFYRNGDEGYVTKLVR-NYRCHPAILDLPSKLFYGGELLACKDDATS--LSSAKVDIF 662
G+ +L+ YR HP+I P++ FY ++L DA S L S +
Sbjct: 614 LL--------GHNKQLLNMQYRMHPSISIFPNREFYDMKIL----DAPSVRLRSYEKKFL 661
Query: 663 PNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRE-NTELNET-DIGVITP 719
P K + P F I E+ G S N EVS V +I++KL + + T +GVI+P
Sbjct: 662 PEKMYGPYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISP 721
Query: 720 YRQQVLKIK-KVLETWDMPD---VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCL 775
Y+ QV I+ ++ E ++ V V +V+ FQG E ++II+STVRS + +
Sbjct: 722 YKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRS-------NGNGAI 774
Query: 776 GFLSNPRRFNVAITRARSLLIIVGN 800
GFLSN +R NVA+TRAR L I+GN
Sbjct: 775 GFLSNQQRTNVALTRARYCLWILGN 799
Score = 85 (35.0 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLI 469
+I+GPPGTGKT T +L R R L CA +N A + RL+
Sbjct: 292 LIWGPPGTGKTKTTSVLLLNFLKMR--CRTLTCAPTNIAVLEVCSRLV 337
Score = 57 (25.1 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 447 EHSRILVCAASNSAADHM---LERLISNEVAGIKENE 480
+++ +L C AS+SA HM ++ L+ +E A +KE E
Sbjct: 532 DNAYLLFCTASSSARLHMSSPIQLLVIDEAAQLKECE 568
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 237 (88.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 91/305 (29%), Positives = 143/305 (46%)
Query: 526 TYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPV 585
+Y + + TN + F I +DE Q+ EP+ IP+ L + +V+AGD QL P
Sbjct: 388 SYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLL-LSNRFKRLVIAGDNMQLPPT 446
Query: 586 IYSKDAETFGLGKS------YLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
I ++ + + S LF+ E Y L YR + +I+ PS
Sbjct: 447 IKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQL 506
Query: 640 YGGELLACKDDATSLSSAK---VDIFPNKDFPVLFFGIQGCDEREG-----NNPSWFNRF 691
Y +L C D +S V+I + +++ QG + E + S +N
Sbjct: 507 YDNQL-KCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDM 565
Query: 692 EVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVL----ETWDMPD------VKV 741
E+ V I KL ++ + DIGVI PY QV +KK + E + +++
Sbjct: 566 ELLVVKGHIKKLL-SSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEI 624
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
TV+ FQG+E+EVII++ VRS N+ R +GFLS RR NVA+TR + L +VG+
Sbjct: 625 STVDGFQGREKEVIILTLVRS----ND-SRE--IGFLSEQRRLNVAMTRPKRQLCVVGDL 677
Query: 802 HIVCQ 806
++ Q
Sbjct: 678 ELMNQ 682
Score = 133 (51.9 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAA 456
FN LN Q ++++ + +I+GPPGTGKT TL+E I Q+ S E ++LVC
Sbjct: 218 FNDKLNASQRQAIDFAINDSNIT--IIHGPPGTGKTYTLIELIQQLTSKGE--KVLVCGP 273
Query: 457 SNSAADHMLERL 468
SN + D +LERL
Sbjct: 274 SNISVDTILERL 285
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 237 (88.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 91/305 (29%), Positives = 143/305 (46%)
Query: 526 TYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPV 585
+Y + + TN + F I +DE Q+ EP+ IP+ L + +V+AGD QL P
Sbjct: 388 SYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLL-LSNRFKRLVIAGDNMQLPPT 446
Query: 586 IYSKDAETFGLGKS------YLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
I ++ + + S LF+ E Y L YR + +I+ PS
Sbjct: 447 IKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQL 506
Query: 640 YGGELLACKDDATSLSSAK---VDIFPNKDFPVLFFGIQGCDEREG-----NNPSWFNRF 691
Y +L C D +S V+I + +++ QG + E + S +N
Sbjct: 507 YDNQL-KCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDM 565
Query: 692 EVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVL----ETWDMPD------VKV 741
E+ V I KL ++ + DIGVI PY QV +KK + E + +++
Sbjct: 566 ELLVVKGHIKKLL-SSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEI 624
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNP 801
TV+ FQG+E+EVII++ VRS N+ R +GFLS RR NVA+TR + L +VG+
Sbjct: 625 STVDGFQGREKEVIILTLVRS----ND-SRE--IGFLSEQRRLNVAMTRPKRQLCVVGDL 677
Query: 802 HIVCQ 806
++ Q
Sbjct: 678 ELMNQ 682
Score = 133 (51.9 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 398 FNS-LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAA 456
FN LN Q ++++ + +I+GPPGTGKT TL+E I Q+ S E ++LVC
Sbjct: 218 FNDKLNASQRQAIDFAINDSNIT--IIHGPPGTGKTYTLIELIQQLTSKGE--KVLVCGP 273
Query: 457 SNSAADHMLERL 468
SN + D +LERL
Sbjct: 274 SNISVDTILERL 285
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 298 (110.0 bits), Expect = 9.2e-25, Sum P(3) = 9.2e-25
Identities = 95/293 (32%), Positives = 153/293 (52%)
Query: 522 IIISTYMSSSLLNTNGIKRGN----FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAG 577
II T +S L RG FS + +DEAGQ+ E E++ P+ + C K ++L G
Sbjct: 2150 IICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNK---LILVG 2206
Query: 578 DPKQLGPVIYSKDAETFGLGKSYLERLFECEFYR-NGDEGYVTKL-----VRNYRCHPAI 631
DPKQL P + S A+ +G +S + R C N + +++L YR HP I
Sbjct: 2207 DPKQLPPTVISMKAQEYGYDQSMMARF--CRLLEENVEHNMISRLPILQLTVQYRMHPDI 2264
Query: 632 LDLPSKLFYGGELLACKD-DATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNR 690
PS Y L + +A SS D +P + P L F + ER N+ S+ N
Sbjct: 2265 CLFPSNYVYNRNLKTNRQTEAIRCSS---D-WPFQ--PYLVFDVGDGSERRDND-SYINV 2317
Query: 691 FEVSKVVDIINKLRENT-ELNETDIGVITPYRQQVLKIKKVLET-WDMPD-VKVGTVEQF 747
E+ V++II +++ +++ +IG+IT Y+ Q I+K L+ +D +V TV+ F
Sbjct: 2318 QEIKLVMEIIKLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAF 2377
Query: 748 QGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
QG++++ +IV+ VR+ N + +GFL++ +R NV ITRA+ L I+G+
Sbjct: 2378 QGRQKDCVIVTCVRA----NSIQGS--IGFLASLQRLNVTITRAKYSLFILGH 2424
Score = 93 (37.8 bits), Expect = 9.2e-25, Sum P(3) = 9.2e-25
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTRE---HS-----------RILVCAASNSAADHMLER 467
+I+GPPGTGK+ T+V + ++ + + HS R+LVCA SN+A D ++++
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 468 LI 469
+I
Sbjct: 2020 II 2021
Score = 45 (20.9 bits), Expect = 2.3e-24, Sum P(4) = 2.3e-24
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 296 AERRPSLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSL 349
A + S + DF A A +K +V+ DE+ K + QHR +L
Sbjct: 754 ALEKVSTSNEDFSLKDDALAKTSKRKT---KVQKDEICAKLSHVIKKQHRKSTL 804
Score = 40 (19.1 bits), Expect = 9.2e-25, Sum P(3) = 9.2e-25
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 92 PANSLTLSLMEPPSGKPDP 110
P N + +S E P G DP
Sbjct: 1452 PTNEVIVSTSEDPLGGGDP 1470
Score = 40 (19.1 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 306 DFVFVKLAAANADAKKG-SIYRVEADEVILKFAKE 339
D+ +L+ A + G I R E DE I K +KE
Sbjct: 2088 DYQLDELSRQRALCRGGREIQRQELDENISKVSKE 2122
Score = 38 (18.4 bits), Expect = 2.3e-24, Sum P(4) = 2.3e-24
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 142 KEMGLHKSVVQFDIGDD 158
+EM SV+Q DIG D
Sbjct: 384 EEMETLASVLQSDIGQD 400
Score = 37 (18.1 bits), Expect = 2.9e-24, Sum P(4) = 2.9e-24
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 267 EEDMRCHSMECVTMRRK 283
+ED+ C+ +ECV K
Sbjct: 34 DEDL-CYCLECVAEYHK 49
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 311 (114.5 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 94/275 (34%), Positives = 143/275 (52%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
F + +DEA Q E ++IP+ +K +L GDPKQL P + S+ A +G +S
Sbjct: 1574 FETVIIDEAAQCVELSALIPLKYGASK---CILVGDPKQLPPTVLSQSAARYGYDQSLFV 1630
Query: 603 RLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIF 662
R+ + G V L YR HP I PSK FY G LLA D + + AK+
Sbjct: 1631 RM------QQNHPGKVHLLDCQYRMHPEISLYPSKEFYEG-LLA---DGSDM--AKLRQQ 1678
Query: 663 PNKDFPVL----FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLREN--TELN-ETDIG 715
P D P+L FF ++G ER S N E++ + I K + + + ++ + IG
Sbjct: 1679 PWHDNPLLGPYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIG 1738
Query: 716 VITPYRQQVLKIK-KVLETWD---MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDR 771
+ITPY+ Q+ ++ K E W + D++ T + FQG+E E+II S VR++
Sbjct: 1739 IITPYKAQLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASP------- 1791
Query: 772 TYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
T +GF+++ RR NV +TRARS L I+G+ + Q
Sbjct: 1792 TGGIGFMTDIRRMNVGLTRARSSLWILGDSRALRQ 1826
Score = 71 (30.1 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRI--LVCAASNSAADHMLERLISNEVAGIKEN 479
++ GPPGTGKT T++ A++ T + SR +N A + M ++L+ + +
Sbjct: 1346 LVQGPPGTGKTKTII-AMVGALLTGKISRAPPTRIKPANGADEPMAQKLLVCAPSNAAVD 1404
Query: 480 E-ILRLNA 486
E +LRL A
Sbjct: 1405 ELVLRLKA 1412
Score = 39 (18.8 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 6 KDCWDDECSVTGEKRE 21
++ WD E +T E+++
Sbjct: 44 EEVWDGEVQITAEQKK 59
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 284 (105.0 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 82/232 (35%), Positives = 121/232 (52%)
Query: 573 VVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAIL 632
VVL GDPKQL I S A + +S +RL E +N T+ YR H I
Sbjct: 612 VVLVGDPKQLPATIISPLAIKYKYDQSLFQRLQE----KNSPHMLTTQ----YRMHSLIR 663
Query: 633 DLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRF 691
PS+ FY LL D ++ S N F P++F+ + E + S FN
Sbjct: 664 AFPSRHFYQDLLL----DGPNIPSRATHYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEH 719
Query: 692 EVSKVV---DIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQ 748
E + + K+ + + + IG+I+PYRQQVL ++++ + + P + + TV+ FQ
Sbjct: 720 ECKMAMYLFQLFTKVYPDEDF-ASRIGIISPYRQQVLALREIFKNY--PGISIDTVDGFQ 776
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
G+ERE+II S VR+ V+ +GFLS+ RR NVA+TR RS L+I+GN
Sbjct: 777 GREREIIIFSCVRAPVEEGAG-----IGFLSDVRRMNVALTRPRSSLLILGN 823
Score = 277 (102.6 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 82/247 (33%), Positives = 125/247 (50%)
Query: 523 IISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQL 582
I++T +S S + G F + +DEA QA E ++IPI + C K VVL GDPKQL
Sbjct: 565 IVATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQHGCKK---VVLVGDPKQL 621
Query: 583 GPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGG 642
I S A + +S +RL E +N T+ YR H I PS+ FY
Sbjct: 622 PATIISPLAIKYKYDQSLFQRLQE----KNSPHMLTTQ----YRMHSLIRAFPSRHFYQD 673
Query: 643 ELLACKDDATSLSSAKVDIFPNKDF-PVLFFGIQGCDEREGNNPSWFNRFEVSKVV---D 698
LL D ++ S N F P++F+ + E + S FN E +
Sbjct: 674 LLL----DGPNIPSRATHYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECKMAMYLFQ 729
Query: 699 IINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVS 758
+ K+ + + + IG+I+PYRQQVL ++++ + + P + + TV+ FQG+ERE+II S
Sbjct: 730 LFTKVYPDEDF-ASRIGIISPYRQQVLALREIFKNY--PGISIDTVDGFQGREREIIIFS 786
Query: 759 TVRSTVK 765
VR+ V+
Sbjct: 787 CVRAPVE 793
Score = 80 (33.2 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 38/124 (30%), Positives = 57/124 (45%)
Query: 349 LYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSI-KAAPFV--PFNSL-NEE 404
L N+S T R +YQ Q+ N L+ + + K P + F+S N+
Sbjct: 283 LCNLS-TLQR-EFAALYQCSQS--NFMKTLMMRDDDGEDGIVMKIPPLLHDQFSSTYNDS 338
Query: 405 QTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRIL--VCAASNSAAD 462
Q ++ L +G +I GPPGTGKT IL + S HS I+ V + N+ D
Sbjct: 339 QLNALTSAL--EGNAITLIQGPPGTGKT----HVILGLISVLLHSTIVPKVKSGGNNLGD 392
Query: 463 HMLE 466
H+L+
Sbjct: 393 HLLK 396
Score = 68 (29.0 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 450 RILVCAASNSAADHMLERLISNEVA---GIKEN-EILRLNATSRP-YEDVPTDFIRFC 502
RIL+CA SN A D ++ RLI + + G K N ++R+ S E V D++ C
Sbjct: 463 RILLCAPSNGAVDEIVSRLIRDGLLNADGRKYNPNLVRVGPGSHSDVESVSLDYMVRC 520
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 313 (115.2 bits), Expect = 5.8e-24, Sum P(3) = 5.8e-24
Identities = 103/291 (35%), Positives = 152/291 (52%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
I+ +T SS + + G F + +DEA QASE + P+A + VL GDP+Q
Sbjct: 918 IVFTTVSSSGRKLFSRLTHG-FDMVVIDEAAQASEVGVLPPLALGAAR---CVLVGDPQQ 973
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVR-NYRCHPAILDLPSKLFY 640
L + SK A T +S ER F+ G T L+ YR HP I D PS+ FY
Sbjct: 974 LPATVISKAAGTLLYSRSLFER-FQLA-------GCPTLLLTVQYRMHPQIRDFPSRYFY 1025
Query: 641 GGELLACKDDATSLSSAKVDIFPNKDF---PVLFFGIQ-GCDEREGNNPSWFNRFEVSKV 696
G L D+ S+S+A +I+ KD P LFF I G + G + S+ N E
Sbjct: 1026 QGRLT----DSESVSTAPDEIY-YKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFC 1080
Query: 697 VDIINKLRENTEL---NETDIGVITPYRQQV--LKIK--KVLETWDMPDVKVGTVEQFQG 749
V + L+ + + +GVITPY+ Q+ LKI+ L ++ ++ + TV+ FQG
Sbjct: 1081 VGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQG 1140
Query: 750 QEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
QER+VII+S VR++ H +GF+++ RR NVA+TRA+ L ++GN
Sbjct: 1141 QERDVIIMSCVRAS-NHG-------VGFVADIRRMNVALTRAKRALWVMGN 1183
Score = 61 (26.5 bits), Expect = 5.8e-24, Sum P(3) = 5.8e-24
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 450 RILVCAASNSAADHMLERLI 469
R+LVCA SN+A D +L R++
Sbjct: 743 RMLVCAPSNAATDELLSRVL 762
Score = 58 (25.5 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 414 GCKGAPPY---VIYGPPGTGKTMTL--VEAILQVYSTREHSRILVCAASNSAADHMLERL 468
G K P+ ++ GPPGTGKT T+ + ++ + +++ L+ + + + E
Sbjct: 652 GVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLAPESYKQVNESS 711
Query: 469 ISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREA 516
N V+G +E+L+ N + +P + C + + C P A
Sbjct: 712 SDNIVSG-SIDEVLQ-NMDQNLFRTLP----KLCA-KPRMLVCAPSNA 752
Score = 37 (18.1 bits), Expect = 5.8e-24, Sum P(3) = 5.8e-24
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 373 NLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRS 408
N +P + PS + ++ A P +++N + S
Sbjct: 28 NQQPQVTIPSSNPSSSALLATPSSSQDNVNNNRVFS 63
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 328 (120.5 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 130/477 (27%), Positives = 218/477 (45%)
Query: 349 LYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRS 408
+ V F + + R +QAV A E L+ P+ S + P +P N Q
Sbjct: 710 ILEVQFQLDPLAFPRWHQAVDALP--EEWLVLPNLSACALPCPS-PILPAPQGNSRQKLV 766
Query: 409 VEIILGC-----KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAAD- 462
+ I+ G + P ++ GP GTGKT L A L+V + +++L+C +NS AD
Sbjct: 767 MAIVAGTSPGDTRPVAPLLVCGPFGTGKTYALAMASLEVIR-QPGTKVLICTHTNSTADS 825
Query: 463 HMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEES--IFKCPPREALGRY 520
++ E G E LR+ + P +R+C E F+ P R L ++
Sbjct: 826 YIAEYFHPYTSRGHPEAIPLRVMDPTCPPRQTDAVTLRYCCLTEDRQAFRPPTRAELEQH 885
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
R+++++ + L + G FSHIF+DEA Q E E++ P+ T T VVLAGD
Sbjct: 886 RVVVASATQARGLR---VPAGFFSHIFIDEAAQMLEWEALTPL-RYATPGTRVVLAGDHM 941
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTK----LVRNYRCHPAILDLPS 636
++ P ++S A G + L RL + +R + L +NYR AI+ S
Sbjct: 942 RVAPRLFSAAAGRIA-GPTLLHRLLQ--HFREQAPAVAQRSCVILCKNYRSTEAIVRFVS 998
Query: 637 KLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKV 696
+ F + + +S K+ P++ +P+LF G E++ + SW N EV +V
Sbjct: 999 RHF------SMASGSRPHASGKIPPHPHR-YPLLFCHAAGVPEQDVSMTSWLNAAEVVQV 1051
Query: 697 VDIINKLRENT-----ELNET-DIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
V+ + ++ NT L E DI V++ QV +++ L D+ V V + E G+
Sbjct: 1052 VEKVQEVY-NTWPHCWGLREQKDICVVS-CGAQVSALRQELRKRDLGQVSVCSFEILPGR 1109
Query: 751 EREVIIVSTVRSTVKHNEF--DRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVC 805
V+++STV + H R F ++ + +T A+S ++ VG+ +C
Sbjct: 1110 AFRVVVLSTVHN---HRSLLSQRAPAPEFFTDACVLHTVMTHAQSQVVAVGDAVALC 1163
Score = 287 (106.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 91/295 (30%), Positives = 154/295 (52%)
Query: 519 RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGD 578
R+R+++ T ++ + + N I +DEAG ASEPE++IP+ + + VV+L GD
Sbjct: 2565 RHRVLLCTCSCAASASLRDV---NIRQILVDEAGLASEPETLIPLVSFSQVEKVVLL-GD 2620
Query: 579 PKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKL 638
KQL PV+ S+ + GL +S L+R YR + L Y H +I PS
Sbjct: 2621 HKQLRPVVKSEQLQNLGLDRSLLQR------YRRD----ASMLDLQYCVHESICAFPSME 2670
Query: 639 FYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDE------REGNNPSWFNRFE 692
FY +L + L + + + ++ V+F +Q +E EG S N+ +
Sbjct: 2671 FYKKKLKTWQ--GLRLPPSILG-YGKENCSVIFGDVQSPEESLVVSTEEGRENSKVNKEQ 2727
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQER 752
+ VV + +L ++ D+ ++TPY QVL+I K LE + V V ++ + QG++
Sbjct: 2728 AALVVCLAKQLVSG-RVDPKDMAILTPYHAQVLEISKRLEEARVAGVTVCSITKSQGRQW 2786
Query: 753 EVIIVSTVRSTVKHNEFD----RTYC---LGFLSNPRRFNVAITRARSLLIIVGN 800
++VSTVR T + ++ D +++ LGFL +P + NVA+TRA+ L +VG+
Sbjct: 2787 RYVLVSTVR-TCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVGD 2840
Score = 60 (26.2 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 422 VIYGPPGTGKTMT-------LVEAILQVYSTREHSR--------ILVCAASNSAADHMLE 466
VI+GPPGTGKT+ L ++ Q + H +L+C+ S+ + D + E
Sbjct: 2403 VIHGPPGTGKTVVGLHIAYWLCQSNEQAAARGPHGGDEQMGGPCLLLCSPSSKSVDVLAE 2462
Query: 467 RLISNEVAGIKENEIL--RLNATSRPYEDV 494
L+S A +K + + AT P V
Sbjct: 2463 LLLSRR-AELKPLRVYGEQAEATEFPVPGV 2491
Score = 41 (19.5 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 78 EPVEVWGIRIYCSE-PANSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDRVLQ 128
+P+ V+G + +E P + S PP P ++ L ++ R+ Q
Sbjct: 2472 KPLRVYGEQAEATEFPVPGV--SSWAPPKKTPQEERPNQTLRSITLHHRIRQ 2521
Score = 38 (18.4 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 98 LSLMEPPSGK-----PDPQK-----DQGFLEGFSIEDRVLQPL 130
L + PPSG P P DQGFL G + ++ P+
Sbjct: 625 LGTLFPPSGALYGEVPIPHSLALATDQGFLLGRMVSTALVAPV 667
Score = 37 (18.1 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 298 RRPSLVHGDFVFVKLAAANADAKKG 322
R L+ D V LA A+ D +KG
Sbjct: 1803 RLADLITTDDVHPSLAVASLDWRKG 1827
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 282 (104.3 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 102/297 (34%), Positives = 150/297 (50%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
LG ++ ST S+ L T G + +DEA Q E ES IP+ + ++L
Sbjct: 542 LGHACLLFSTASCSARLYT-GTP---IQLLVIDEAAQLKECESSIPMQLPGLRH--LILV 595
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GD +QL ++ S+ A G G+S ERL G + Y+ + YR H +I P+
Sbjct: 596 GDERQLPAMVESQIALEAGFGRSLFERLALL-----GHKKYMLNI--QYRMHCSISSFPN 648
Query: 637 KLFYGGELLACKDDATSLSSAKV--DIFPNKDF-PVLFFGIQ-GCDER-EGNNPSWFNRF 691
K YG ++L DA ++ P + + P F I G +E EG S N
Sbjct: 649 KELYGKKIL----DAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNV 704
Query: 692 EVSKVVDIINKLRENTELNET--DIGVITPYRQQVLKIKKVLETWDMPD------VKVGT 743
EV V II L + +E +T ++GVI+PY+ QV+ I++ ++ + D +++ T
Sbjct: 705 EVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRT 764
Query: 744 VEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
V+ FQG E ++IIVSTVRS N R +GFL N RR NV +TRAR L I+GN
Sbjct: 765 VDGFQGGEEDIIIVSTVRS----NGVGR---VGFLGNRRRTNVLLTRARFCLWILGN 814
Score = 72 (30.4 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 380 FPSQSTKRRSIKAAP--FVPFNSLNEEQTRSVEIILGCKGAPPY-VIYGPPGTGKTMTLV 436
F Q + S AP F+ N E+ + + C A +I+GPPGTGKT T
Sbjct: 218 FCIQCLQEGSDGLAPRRFLKLNPSQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTS 277
Query: 437 EAILQVYSTREHSRILVCAASNSAADHMLERLI 469
+ + + + R L C +N + + R++
Sbjct: 278 VLLFTLLNAK--CRTLTCGPTNVSVLEVASRVL 308
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 298 (110.0 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 130/450 (28%), Positives = 206/450 (45%)
Query: 374 LEPNL--LFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGA----PPYVIYGPP 427
L+PN + P S++ + + LN Q ++ L + + +I+GP
Sbjct: 175 LQPNTAGMEPIVSSRTWGQNVLDIIRSSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL 234
Query: 428 GTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLI--SNEVA-----GIKENE 480
T TL+ +L++ + +VCA +N+A + RL+ SN+ + G+ N
Sbjct: 235 KTKTVATLLLVLLKL-----RCKTVVCAPTNTAIVEVTSRLLALSNKYSEHATYGLG-NI 288
Query: 481 ILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKR 540
L N +D TD++R F + I K + L S LL K
Sbjct: 289 FLAGNQKRMRIKD--TDYLRNVFLDHRISKLR-KLFLSTCGWKQSLESIIDLLENTETKT 345
Query: 541 GNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSY 600
GN + +DEA Q E ES+ + + +++ GD QL ++++ E G+S
Sbjct: 346 GNIEVLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQLPAMVHNDQCEKAKFGRSL 403
Query: 601 LERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVD 660
ERL G + ++ + YR HP+I P K FYGG + KD A S
Sbjct: 404 FERLVLL-----GHKKHLLDV--QYRMHPSISRFPYKEFYGGRI---KDAANVQESIYQK 453
Query: 661 IF--PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELN-ETDIGV 716
F N F + E G+ S N EV+ V +II+ L + + E + +GV
Sbjct: 454 RFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGV 513
Query: 717 ITPYRQQVLKIKKVLE------TWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFD 770
ITPY+ QV I++ + + ++ V V +V+ FQG E ++II+STVRS N
Sbjct: 514 ITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRS----NSNG 569
Query: 771 RTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+ +GFLSN +R NVA+TRAR L ++GN
Sbjct: 570 K---VGFLSNRQRANVALTRARHCLWVIGN 596
Score = 43 (20.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 109 DPQKDQGFLEGFSIEDRVLQP 129
D +K GF F + VLQP
Sbjct: 157 DEKKSLGFAPNFDLIQSVLQP 177
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 266 (98.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 92/292 (31%), Positives = 149/292 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESM--IPIANLCTKQTVVVLAGDP 579
II T +SS+ N N + G+ + +DE Q E ES+ + + LC +L GD
Sbjct: 541 IIFCT--ASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCH----ALLIGDE 594
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
QL ++++++ + G+S ERL G ++ + YR HP+I P+K F
Sbjct: 595 YQLPAMVHNEECDKAKFGRSLFERLVLI-----GHSKHLLNV--QYRMHPSISRFPNKEF 647
Query: 640 YGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI-QGCDE-REGNNPSWFNRFEVSKVV 697
YGG + + S+ + + N F + +G +E +G++P N EV+ +
Sbjct: 648 YGGRITDAANVQESIYEKRF-LQGNMFGTFSFINVGRGKEEFGDGHSPK--NMVEVAVIS 704
Query: 698 DIINKLRE--NTELNETDIGVITPYRQQVLKIK-KVLETWDMPDV------KVGTVEQFQ 748
II+ L + + + +GVI+PY+ QV I+ +V + ++ V V +V+ FQ
Sbjct: 705 KIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQ 764
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
G E +VII+STVR V N +GFLSN +R NVA+TRAR L ++GN
Sbjct: 765 GGEVDVIIISTVRCNVNGN-------VGFLSNRQRANVALTRARHCLWVIGN 809
Score = 80 (33.2 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
+I+GPPGTGKT T+ + + + + +VCA +N+ + RL+S
Sbjct: 269 LIWGPPGTGKTKTVATLLSTLMQLK--CKTVVCAPTNTTIVAVASRLLS 315
Score = 39 (18.8 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLER 467
V+ P T T+V ++ S + + +VCA +NSA ++ R
Sbjct: 297 VVCAPTNT----TIVAVASRLLSLSKET--IVCAPTNSAIAEVVSR 336
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 251 (93.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 86/291 (29%), Positives = 151/291 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
II+ T ++ +N + GN + +DEA Q E ES+ + + +++ GD Q
Sbjct: 345 IILCTASGAAEMNVE--RTGNVELLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQ 400
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYG 641
L +++++ E G+S ERL G ++ + YR HP+I P+K FYG
Sbjct: 401 LPAMVHNEMCEKAKFGRSLFERLVLL-----GHNKHLLDV--QYRMHPSISRFPNKEFYG 453
Query: 642 GELLACKDDATSLSSA---KVDIFPNKDFPVLFFGIQGCDE-REGNNPSWFNRFEVSKVV 697
G + ++ S+ K ++F + F + G +G +E +G++P N EV+ +
Sbjct: 454 GRIKDAENVKESIYQKRFLKGNMFDS--FSFINVG-RGKEEFGDGHSPK--NMVEVAVIS 508
Query: 698 DIINKL-RENTELN-ETDIGVITPYRQQVLKIK-KVLETWDMPD-----VKVGTVEQFQG 749
+II+ L + + E + +GV++PY+ Q+ I+ K+ + + + V +V+ FQG
Sbjct: 509 EIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQG 568
Query: 750 QEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
E ++II+STVRS +GFL+N +R NVA+TRAR L ++GN
Sbjct: 569 GEEDIIIISTVRSNGNGK-------VGFLNNRQRANVALTRARHCLWVIGN 612
Score = 91 (37.1 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 41/152 (26%), Positives = 66/152 (43%)
Query: 346 NGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQ 405
N ++N +N ++ + ++V A F S++ R + + LN Q
Sbjct: 6 NTRIWNA--LHNEADISTLTKSVLQANTEGTEQCFCSENDGRSDL-VLDIIRSTKLNSSQ 62
Query: 406 TRSVEIILGC--------KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAAS 457
+ ILGC K + +I+GPP TGKT T+ + + R + +VCA +
Sbjct: 63 E---DAILGCLETRNCTHKNSVK-LIWGPPRTGKTKTVATLLFALLKLR--CKTVVCAPT 116
Query: 458 NSAADHMLERLISNEVAGIKENEILRLNATSR 489
N+A + RL+S KEN NAT R
Sbjct: 117 NTAIVQVTSRLLSL----FKENSTAE-NATYR 143
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 302 (111.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 101/294 (34%), Positives = 150/294 (51%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANL-CTKQTV 572
R L + R++ T + N +K F + LDE Q +EP S++PIA C K
Sbjct: 594 RVLLKQARVVGITCAACPFPCMNDLK---FPVVVLDECSQMTEPASLLPIARFECEK--- 647
Query: 573 VVLAGDPKQLGPVIYSKDA-ETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAI 631
++L GDPKQL P I DA GL ++ +RL C G + +L YRCHP I
Sbjct: 648 LILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRL--CLM---GHKPI--QLRTQYRCHPVI 700
Query: 632 LDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRF 691
+ + LFY G L+ + S ++ P + F+ + G ++ E N S+ N
Sbjct: 701 SAIANDLFYEGNLVNGISERER--SPVLEWLPT----LCFYNVTGTEQVEREN-SFVNVA 753
Query: 692 EVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDM--PDVK---VGTVEQ 746
E + + +I L + L + IGVIT Y+ Q+ KI +L D+ PDVK V TV+
Sbjct: 754 EAAFTLKLIRSLIASG-LEGSMIGVITLYKSQMYKICSLLSAVDVDHPDVKAVEVSTVDA 812
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
FQG E+E+II+S VR T +GF+ + +R NVA+TR R L+I+G+
Sbjct: 813 FQGAEKEIIILSCVR----------TRQVGFIDSEKRMNVALTRGRRHLLIIGS 856
Score = 42 (19.8 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 419 PPYVIYGPPGTGKTMTLVEAILQVYSTREHS-----------RILVCAASNSAADHMLER 467
P VI+G G GK+ L IL + E ++L+ +++N A D +L
Sbjct: 465 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLLG 524
Query: 468 LIS 470
L+S
Sbjct: 525 LLS 527
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 253 (94.1 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 86/289 (29%), Positives = 150/289 (51%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
II+ T ++ +N + GN + +DEA Q E ES+ + + +++ GD Q
Sbjct: 508 IILCTASGAAEMNVE--RTGNVELLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQ 563
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYG 641
L +++++ E G+S ERL G ++ + YR HP+I P+K FYG
Sbjct: 564 LPAMVHNEMCEKAKFGRSLFERLVLL-----GHNKHLLDV--QYRMHPSISRFPNKEFYG 616
Query: 642 GELLACKDDATSLSSAKVDIFPNKDFPVLFFGI-QGCDE-REGNNPSWFNRFEVSKVVDI 699
G + ++ S+ + + N F + +G +E +G++P N EV+ V +I
Sbjct: 617 GRIKDAENVKESIYQKRF-LQGNMFGSFSFINVGRGKEEFGDGHSPK--NMVEVAVVSEI 673
Query: 700 INKL-RENTELN-ETDIGVITPYRQQVLKIK-KVLETWDMPD-----VKVGTVEQFQGQE 751
I+ L + + E + +GV++PY+ Q+ I+ K+ + + + V +V+ FQG E
Sbjct: 674 ISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGFQGGE 733
Query: 752 REVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
++II+STVRS N + +GFL+N +R NVA+TRAR L ++GN
Sbjct: 734 EDIIIISTVRS----NSNGK---VGFLNNRQRANVALTRARHCLWVIGN 775
Score = 95 (38.5 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
+I+GPPGTGKT T+ + + R + +VCA +N+A + RL+S KEN
Sbjct: 246 LIWGPPGTGKTKTVATLLFALLKLR--CKTVVCAPTNTAIVQVASRLLSL----FKENST 299
Query: 482 LRLNATSR 489
NAT R
Sbjct: 300 SE-NATYR 306
Score = 37 (18.1 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 376 PNLLFPSQS---TKRRSIKAAPFVPFNSLNEEQTR 407
P+LL + + + +S+ +PFV S+ E +T+
Sbjct: 48 PHLLIEAHTELFSSLKSVSKSPFVQIRSM-ETKTK 81
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 263 (97.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 92/313 (29%), Positives = 150/313 (47%)
Query: 508 IFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLC 567
+ K + + +Y +++ T SS L + +F I +DE A+EPE+ IP+ +
Sbjct: 167 LLKKANQHEIEKYDVVLCT--CSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHN 224
Query: 568 TKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRC 627
+Q +VL GD +Q+ P++ + G+ KS ER + L YR
Sbjct: 225 PQQ--IVLLGDHQQIRPIVQCGHVKNKGMEKSLFERYMDL----------ANMLDTQYRM 272
Query: 628 HPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG-IQGCD------ER 680
H I PS FY G+L K A ++ +K+ + FG I+G +
Sbjct: 273 HAEICSFPSDEFYDGKL---KTGAERGPCCLLN--KSKEPTAMLFGHIEGKEVSLVVSTE 327
Query: 681 EGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVK 740
+GN S N E + V + + L + + ++ I ++TPY QV +IK LE ++ +V
Sbjct: 328 KGNENSMANTEEAEQAVCVADLLIKQSGVSPEHIAILTPYNAQVSEIKMTLEKKNVRNVT 387
Query: 741 VGTVEQFQGQEREVIIVSTVRST---------VKHNEFDRTYCLGFLSNPRRFNVAITRA 791
V TV + QG E +IVSTVRS V+ ++ LGF+++ + NVAITRA
Sbjct: 388 VCTVMKSQGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRA 447
Query: 792 RSLLIIVGNPHIV 804
+ L I+GN ++
Sbjct: 448 QDGLCILGNSDLL 460
Score = 64 (27.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 420 PY-VIYGPPGTGKTMTLVEAILQVY 443
P+ VI GPPGTGKT+ + + Q +
Sbjct: 16 PFTVIQGPPGTGKTVVGIHIVFQFF 40
Score = 42 (19.8 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 451 ILVCAASNSAADHMLERLISNEVAGI 476
IL C SN + D + E+L+ +++G+
Sbjct: 67 ILYCGPSNKSVDIVAEQLL--KLSGV 90
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 191 (72.3 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 90/370 (24%), Positives = 171/370 (46%)
Query: 305 GDFVFVKLAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLY-----NVSF-TYNR 358
G++V + + A A G I +EA + L+ ++ ++ + + SF T+N
Sbjct: 532 GEYVVISSTSRLAVAA-GFIVSIEARRLDLRLERDLSQRYSEETFIIDKHDSQSFATFNF 590
Query: 359 INMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNS---LNEEQTRSVEIILGC 415
N+ + + + L +++ + ++ + + + LN + + +
Sbjct: 591 TNLGMLLSEGERFQELR-DIIVAKKPPEQHKVLPKIILTKGAPILLNLNKVQQNAALRAL 649
Query: 416 KGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAG 475
+ +I G PGTGKT TLV A++++ S +L+ A ++SA D+++ RL+ G
Sbjct: 650 TTSSHLLIKGLPGTGKTQTLV-ALVRLLHLLGKS-VLITAQTHSAVDNLIMRLLP---FG 704
Query: 476 IKENEILRLNATSRPY---EDVPTDFI-RFCFFEESIFKCPPREALGRYRIIISTYMSSS 531
+ ++RL + SR + E++ + + + C E + K ALG+ I+ T +
Sbjct: 705 LP---MMRLGSGSRIHKQLEEISEERLTKDCKTVEELEK-----ALGQPSIVGVTCLGCG 756
Query: 532 LLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDA 591
+R F + +DEA Q +P + P+ + C+K VL GDP+QL P++ SK+A
Sbjct: 757 ---HPLFQRRQFDYCIVDEATQVLQPTVLRPLIH-CSK---FVLVGDPEQLPPIVRSKEA 809
Query: 592 ETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDA 651
G ++ +RL E L YR + I L ++L YGG+L C D
Sbjct: 810 RQRGADETLFQRL--------DSEKATAVLSLQYRMNKTITRLANELTYGGDL-KCASDE 860
Query: 652 TSLSSAKVDI 661
S + +V++
Sbjct: 861 VSGARFEVEL 870
Score = 154 (59.3 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 35/87 (40%), Positives = 55/87 (63%)
Query: 714 IGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTY 773
IGVI PYR QV KK+ D D++ TV+QFQG+++ +II S ++ ++ +R+
Sbjct: 968 IGVIAPYRAQVELFKKLASKLDT-DLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSR 1026
Query: 774 CLGFLSNPRRFNVAITRARSLLIIVGN 800
L + RR VAITRA++ LI++G+
Sbjct: 1027 EAEILEDQRRLTVAITRAKNKLILLGD 1053
Score = 46 (21.3 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 29 DDHSVLSYDPSGEGPVIISVPFPFVQGKPQSILVGETSKCSI 70
+DH + DP I+S +V+G+P S+L+ E + I
Sbjct: 235 EDHLMKFIDP------IVSFVAQYVKGEPPSVLLPEVYRGQI 270
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 150 VVQFDIGD-DRFERMVLLLAEDSVS 173
V D GD D F+ + L+ A DS+S
Sbjct: 39 VENIDWGDNDDFD-LALIAAMDSIS 62
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 219 (82.2 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 66/198 (33%), Positives = 103/198 (52%)
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLE 602
FS + +DEAGQ+ E E++ P+ + C K +VL GDPKQL P + S A+ +G +S +
Sbjct: 24 FSCVIVDEAGQSCEVETLSPLIHRCNK---LVLVGDPKQLPPTVISMKAQEYGYDQSMMA 80
Query: 603 RLFECEFYRNGDE----GY--VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSS 656
R C+ E G V +L YR HP I PS Y L + T S
Sbjct: 81 RF--CKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCS 138
Query: 657 AKVDIFPNKDFPVLFFGI-QGCDEREGNNPSWFNRFEVSKVVDIINKLRENT-ELNETDI 714
++ +P + P L F + G ++R+ N S+ N E+ V++II ++E +++ +I
Sbjct: 139 SE---WPFQ--PYLVFDVGDGSEQRD--NDSYINVQEIKLVMEIIKLIKEKRKDISFRNI 191
Query: 715 GVITPYRQQVLKIKKVLE 732
G+IT Y+ Q I+K LE
Sbjct: 192 GIITHYKAQKTMIQKDLE 209
Score = 104 (41.7 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 740 KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVG 799
+V TV+ FQG++++ IIV+ VR++ +GFL++ +R NV ITRA+ L I+G
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILG 327
Query: 800 N 800
+
Sbjct: 328 H 328
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 248 (92.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 91/288 (31%), Positives = 141/288 (48%)
Query: 522 IIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQ 581
II T +S + N I+ G+ + +DEA Q E ES+ + + V++ GD Q
Sbjct: 366 IIFCT--ASGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLSGLRHAVLI--GDELQ 421
Query: 582 LGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYG 641
L P + +A+ G+S ERL G ++ + YR HP+I P+K FYG
Sbjct: 422 L-PAMVHNEAK---FGRSLFERLVLL-----GHNKHLLNV--QYRMHPSISRFPNKEFYG 470
Query: 642 GELLACKDDATSLSSAKVDIF--PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDI 699
G + KD A S F N F + +E G+ S N EV+ + +I
Sbjct: 471 GRI---KDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVISEI 527
Query: 700 INKL-RENTELN-ETDIGVITPYRQQVLKIK-----KVLETWDMPDVKVGTVEQFQGQER 752
I+ L + ++E + +GV++PY+ QV I+ K + + V +V+ FQG E
Sbjct: 528 ISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEE 587
Query: 753 EVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
++II+STVRS +GFL+N +R NVA+TRAR L ++GN
Sbjct: 588 DIIIISTVRSNGNGK-------VGFLNNRQRANVALTRARHCLWVIGN 628
Score = 85 (35.0 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
+I+GPPGTGKT T+ A L + + +VCA +N+A + RL+S
Sbjct: 99 LIWGPPGTGKTKTV--ATLLFCLLKLSCKTVVCAPTNTAIVEVTSRLLS 145
Score = 40 (19.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 19/105 (18%), Positives = 39/105 (37%)
Query: 260 VMEELRLEEDMRCHSMECVTMRR-KGAHLLAL--DVPGLAERRPSLVHGDFVFVKLAAAN 316
++ +L + C+ +R H + L PG + + ++ F +KL+
Sbjct: 68 IIRSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTK-TVATLLFCLLKLSCKT 126
Query: 317 ADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINM 361
+ VE +L K ++H L N+ + N+ M
Sbjct: 127 VVCAPTNTAIVEVTSRLLSLFKTSSSEHSTYGLGNIVLSGNQARM 171
Score = 37 (18.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 405 QTRSVEIILGC--KGAPPYVIYGPPGTGKTMTLVEAILQVYSTR--EHSRILVCAASNSA 460
+T++V +L C K + V+ P T + + +L ++ T EHS N
Sbjct: 108 KTKTVATLLFCLLKLSCKTVVCAPTNTA-IVEVTSRLLSLFKTSSSEHSTY---GLGNIV 163
Query: 461 ADHMLERLISNEVAGIKENEIL 482
R+ GIKEN++L
Sbjct: 164 LSGNQARM------GIKENDVL 179
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 284 (105.0 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 107/416 (25%), Positives = 195/416 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ ++++ S +L+ + ++SA
Sbjct: 633 LNKPQKQAMKKVLLSKDYT--LIVGMPGTGKTTTIC-TLVRILHACGFS-VLLTSYTHSA 688
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRY 520
D++L +L V ++ + +++ PY + + R ++ + E L
Sbjct: 689 VDNILLKLKRFRVGFLRLGQGQKVHPDILPYTE---ESAR----KKGVHTLSELEQLYNK 741
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
+++ T + R F +DEA Q S+P + P+ ++ V+V GD +
Sbjct: 742 ELVVGTTCLG--IRHPLFTRRRFDFCIVDEASQISQPVCVGPL--FYARRFVLV--GDHQ 795
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P++ +++A + G+ +S +RL E +R+ V +L YR + I+ L + L Y
Sbjct: 796 QLPPIVQNQEARSLGMDESLFKRL---ELHRDA----VVQLNVQYRMNRQIMSLSNSLMY 848
Query: 641 GGELLACKDDATSLSSAKVDIFPN----------------KDFPVLFFGIQGCDEREGNN 684
G L C + T+ S + + P+ PV F E
Sbjct: 849 EGRL-ECGSERTATSLITLPLLPSVLPELGSLAWIQATLLPSNPVCFLDCSAVPALETVE 907
Query: 685 PSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTV 744
+ + ++ + L DIGVI PYRQQ+ I +L+ V+V TV
Sbjct: 908 QGGISNHTEAALIHKLLLLLIKAGCKPGDIGVIAPYRQQLRTISGLLQASAFTGVEVNTV 967
Query: 745 EQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
+++QG+++ +I++S VRST + L + RR NVAITRA+S L+++G+
Sbjct: 968 DRYQGRDKSLILLSFVRSTAEEGPLGE-----LLKDWRRLNVAITRAKSKLLMLGS 1018
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 276 (102.2 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 93/292 (31%), Positives = 146/292 (50%)
Query: 522 IIISTYMSSS--LLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
II ST S+ +L T GIK F + +DEA Q +E S+IP+ K+ ++V GDP
Sbjct: 1564 IICSTLSGSAHDVLATMGIK---FDTVIIDEACQCTELSSIIPL-RYGGKRCIMV--GDP 1617
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLF 639
QL P + S A F Y + LF +N Y+ + YR HP+I PS F
Sbjct: 1618 NQLPPTVLSGAASNF----KYNQSLF-VRMEKNSSP-YLLDV--QYRMHPSISKFPSSEF 1669
Query: 640 YGGELLACKDDATSLSSAKVDIFPNKD--FPVLFFGI-QGCDEREGNNPSWFNRFEVSKV 696
Y G L D + + + P FF I G E+ S+ N E+
Sbjct: 1670 YQGRL----KDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVA 1725
Query: 697 VDIINKLRENTELNETD----IGVITPYRQQVLKIKKVLETW--DM--PDVKVGTVEQFQ 748
+++++ L + N+ D IG+I+PYR+Q+ K++K + M + T++ FQ
Sbjct: 1726 IELVDYLFRKFD-NKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQ 1784
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
GQE+E+I++S VR+ D +GFL + RR NVA+TRA++ + ++G+
Sbjct: 1785 GQEKEIILISCVRAD------DTKSSVGFLKDFRRMNVALTRAKTSIWVLGH 1830
Score = 73 (30.8 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN Q ++ + +G +I GPPGTGKT T++ I ST+ A+S++
Sbjct: 1335 LNTSQAEAIVNSVSKEGFS--LIQGPPGTGKTKTILGIIGYFLSTKN-------ASSSNV 1385
Query: 461 ADHMLERLISNEVAGIKENEIL 482
LE+ SN +K+ +IL
Sbjct: 1386 IKVPLEKNSSNTEQLLKKQKIL 1407
Score = 53 (23.7 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 450 RILVCAASNSAADHMLERLIS 470
+IL+CA SN+A D + RL S
Sbjct: 1405 KILICAPSNAAVDEICLRLKS 1425
Score = 42 (19.8 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 216 SNYKLPEFPIPNDVRESLANKI 237
S + E PI +V E++ NKI
Sbjct: 571 SGKPISEIPISTNVLENVTNKI 592
Score = 42 (19.8 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 54 QGKPQSILVGETSKCSITIQNTTPE 78
Q KPQ + VG + ++ I++ T E
Sbjct: 1434 QFKPQLVRVGRSDVVNVAIKDLTLE 1458
Score = 41 (19.5 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 430 GKTMTLVEAILQVYSTREH-SRILVCAASNSAADHMLERLISNEVAG 475
GK + L +++ S S + +++ S AD++ + +S+ + G
Sbjct: 937 GKVIDLTDSVPASPSLSPSLSSTIASSSAESRADYLQRKALSSSITG 983
Score = 39 (18.8 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 485 NATSRPYEDVPTDFI 499
N S+ Y D P DF+
Sbjct: 345 NHLSKSYHDKPLDFL 359
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 283 (104.7 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 121/427 (28%), Positives = 203/427 (47%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN EQ ++V L + ++ G PG+GKT TL+ ++Q + ++L+ A ++SA
Sbjct: 686 LNNEQRKAVVHALATEDF--MMVEGLPGSGKT-TLISVLIQCL-VATNKKVLLAAFTHSA 741
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESI--FKCPPREALG 518
D++L +L + EVA K ILRL ++S +D+ ++ E+ + R+ +
Sbjct: 742 VDNILTKL-TKEVAAEK---ILRLGSSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMK 797
Query: 519 RYRIIIST--YMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLA 576
I+ T ++ LL +F + +DEA EP ++P+ L T V L
Sbjct: 798 TTPIVACTCHHVPRELL----FSYRHFDVVIVDEASMVLEP-LLLPV--LATSNKFV-LV 849
Query: 577 GDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPS 636
GD KQL P++ S+ A+ G G S +E+L + G V L YR + I L S
Sbjct: 850 GDCKQLTPLVVSRKAKQEGAGISTMEKL------QQSHPGVVVSLTSQYRMNREISVLSS 903
Query: 637 KLFYGGELLACKDDATSLSSAK------VDIFPNKDF-----------PVLFFGIQG--- 676
KLFY L+ C +++ S SS V + D +F Q
Sbjct: 904 KLFYENRLI-CGNESVSRSSLDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTIN 962
Query: 677 ----CDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLE 732
C++ EG N E + ++ + + + +IGV++ YR+QV I+ +L
Sbjct: 963 SKMQCEDGEGGGMC--NDGEAKLISELCQQF-VMSGVKPHEIGVMSAYRRQVDHIRGILN 1019
Query: 733 TWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRAR 792
+ +++V T++ +QG+E+ VII S T +N ++ L + RR NVA+TRAR
Sbjct: 1020 S---DELEVNTIDSYQGREKRVIIWSL---TWTNNSTKKSE---LLKDERRVNVALTRAR 1070
Query: 793 SLLIIVG 799
L++VG
Sbjct: 1071 QKLVVVG 1077
Score = 47 (21.6 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 76 TPEPVEVWGIRIYCSEPANSLTLSLMEPP-SGKPDPQKDQGFLE 118
TP ++ G+ + N L++ +P S PDP++D F +
Sbjct: 419 TPRAADLLGVL----QQRNKLSVHFEDPTTSNLPDPRQDSRFCD 458
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 276 (102.2 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 86/230 (37%), Positives = 127/230 (55%)
Query: 543 FSHIFLDEAGQASEPESMIPIANL-CTKQTVVVLAGDPKQLGPVIYSKDA-ETFGLGKSY 600
F + LDE Q +EP S++PIA C K ++L GDPKQL P I DA GL ++
Sbjct: 724 FPVVVLDECSQITEPASLLPIARFECEK---LILVGDPKQLSPTIQGSDAAHENGLEQTL 780
Query: 601 LERLFECEFYRNGDEGYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV 659
+RL C G+ L+R YRCHPAI D+ + LFY G L+ D S +
Sbjct: 781 FDRL--CLM------GHKPVLLRTQYRCHPAISDISNDLFYEGNLV----DGIS----ET 824
Query: 660 DIFPNKDF-PVL-FFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVI 717
+ P ++ P L F+ I+G ++ E +N S+ N E + + +I L + + + IGVI
Sbjct: 825 ERGPLLEWLPTLCFYNIKGPEQIERDN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVI 882
Query: 718 TPYRQQVLKIKKVLET--WDMPDVK---VGTVEQFQGQEREVIIVSTVRS 762
T Y+ Q+ K+ +L +D PD+K V TV+ FQG E+E+II+S VR+
Sbjct: 883 TLYKSQMYKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRT 932
Score = 230 (86.0 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 72/193 (37%), Positives = 109/193 (56%)
Query: 616 GYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDF-PVL-FF 672
G+ L+R YRCHPAI D+ + LFY G L+ D S + + P ++ P L F+
Sbjct: 788 GHKPVLLRTQYRCHPAISDISNDLFYEGNLV----DGIS----ETERGPLLEWLPTLCFY 839
Query: 673 GIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLE 732
I+G ++ E +N S+ N E + + +I L + + + IGVIT Y+ Q+ K+ +L
Sbjct: 840 NIKGPEQIERDN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLS 897
Query: 733 T--WDMPDVK---VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVA 787
+D PD+K V TV+ FQG E+E+II+S VR T +GF+ + +R NVA
Sbjct: 898 AVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVR----------TRQVGFIDSEKRMNVA 947
Query: 788 ITRARSLLIIVGN 800
+TR R L+IVGN
Sbjct: 948 LTRGRRHLLIVGN 960
Score = 50 (22.7 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 30/131 (22%), Positives = 60/131 (45%)
Query: 351 NVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVE 410
N++ + +++ Q A+E ++ + L Q+T I+ A + + N E+ + V+
Sbjct: 510 NINTKFELLSLEATLQL--ASELIQAHNLNKDQATAL--IQIAQMMASHE-NAEEVKKVQ 564
Query: 411 IILGCKGAPPYVIYGPPGTGKTMTLVEAIL---QVYSTREHS--------RILVCAASNS 459
P +I+G G GK+ L IL Q++ E ++L+ +++N
Sbjct: 565 T----HTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKSEVLTVGNVRPWKLLISSSTNV 620
Query: 460 AADHMLERLIS 470
A D +L L+S
Sbjct: 621 AVDRVLLGLLS 631
Score = 37 (18.1 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 594 FGLGKSYL 601
FG GKSYL
Sbjct: 577 FGAGKSYL 584
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 275 (101.9 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 138/547 (25%), Positives = 233/547 (42%)
Query: 281 RRKGAHLLALDVPGLAERRPSLVHGDFVFVKLAAANADAKKGSIYRVEADEVILKFAKE- 339
RR G+ + LA +V G+ F+ L+ K D ++K ++
Sbjct: 504 RRSGS----VPATNLASGDRVVVSGEERFLALSTGYIKEVKDENITCILDRSLVKLPEDL 559
Query: 340 -FHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENL--------EPNLLFPSQSTKRRSI 390
F H G ++ N+ R+ + +E L +PN + S
Sbjct: 560 LFRLDHEEGG---GGLEFHLGNLSRLMENSSVSEKLRKLIIDFSKPNFVQHLSSILPPDA 616
Query: 391 KAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSR 450
K LN+ Q ++++ +L K +I G PGTGKT T+ + +Y+
Sbjct: 617 KDIVASILRGLNKPQKQAMKRVLLSKDYT--LIVGMPGTGKTTTICTLVRILYACG--FS 672
Query: 451 ILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFK 510
+L+ + ++SA D++L +L +V LRL T + + DV F EE I K
Sbjct: 673 VLLTSYTHSAVDNILLKLKKFQVG------FLRLGRTQKLHPDVQE------FSEEEICK 720
Query: 511 CPPREALGRYRIIISTY--MSSSLLNTNG--IKRGNFSHIFLDEAGQASEPESMIPIANL 566
++L + ++ ++++ + N R F +DEA Q S+P + P+
Sbjct: 721 AKSIKSLSALEELYNSQPVVATTCMGVNHPIFTRRRFDFCIVDEASQISQPICLGPLF-F 779
Query: 567 CTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--G 616
+ VL GD +QL P++ S +A G+ +S +RL + YR +
Sbjct: 780 ADR---FVLVGDHQQLPPLVKSAEARELGMSESLFKRLERNQEAVVQLTVQYRMNSKIMA 836
Query: 617 YVTKLVRNYRCHPA---ILDLPSKLFYGGELLACKDDATSLSSAKV-DIFPNKDFPVLFF 672
KLV R A + + +L + LL + S S + D+ + PV F
Sbjct: 837 LSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRESQESMWIKDVLEPSN-PVCFL 895
Query: 673 GIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLE 732
+ E + + +K+V + KL +DIG+I PYRQQ+ I
Sbjct: 896 NTEKIPALETEEKGGISNWIEAKLVFHLTKLYLKAGCRPSDIGIIAPYRQQLKMISNYFN 955
Query: 733 TWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRAR 792
+ V+V TV+++QG+++ VIIVS VRS + D L + RR NVA+TRA+
Sbjct: 956 SLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGD------LLKDWRRLNVALTRAK 1009
Query: 793 SLLIIVG 799
LI++G
Sbjct: 1010 HKLIMLG 1016
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 276 (102.2 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 81/229 (35%), Positives = 126/229 (55%)
Query: 543 FSHIFLDEAGQASEPESMIPIANL-CTKQTVVVLAGDPKQLGPVIY-SKDAETFGLGKSY 600
F + LDE Q +EP S++PIA C K +VL GDPKQL P I S+ GL ++
Sbjct: 621 FPVVVLDECSQMTEPTSLLPIARFQCEK---LVLVGDPKQLPPTIQGSESIHEKGLEQTL 677
Query: 601 LERLFECEFYRNGDEGYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLS-SAK 658
+RL C G+ T L+R YRCHPAI + ++LFY G L+ D + S
Sbjct: 678 FDRL--CLM------GHKTILLRTQYRCHPAISAIANELFYEGNLI---DGVSEKERSPL 726
Query: 659 VDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVIT 718
+D P + F+ + G ++ E +N S++N EV V I L + ++ + +GVIT
Sbjct: 727 LDWLPT----LCFYSVNGLEQIERDN-SFYNMAEVHFTVKFIQALIASG-IDGSAVGVIT 780
Query: 719 PYRQQVLKIKKVL-----ETWDMPDVKVGTVEQFQGQEREVIIVSTVRS 762
Y+ Q+ K++ +L E + + V+V TV+ FQG E+E++++S VR+
Sbjct: 781 FYKSQMYKLQNLLRSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRT 829
Score = 233 (87.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 67/192 (34%), Positives = 109/192 (56%)
Query: 616 GYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLS-SAKVDIFPNKDFPVLFFG 673
G+ T L+R YRCHPAI + ++LFY G L+ D + S +D P + F+
Sbjct: 685 GHKTILLRTQYRCHPAISAIANELFYEGNLI---DGVSEKERSPLLDWLPT----LCFYS 737
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVL-- 731
+ G ++ E +N S++N EV V I L + ++ + +GVIT Y+ Q+ K++ +L
Sbjct: 738 VNGLEQIERDN-SFYNMAEVHFTVKFIQALIASG-IDGSAVGVITFYKSQMYKLQNLLRS 795
Query: 732 ---ETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAI 788
E + + V+V TV+ FQG E+E++++S VR+ +T GF + +R NVA+
Sbjct: 796 IHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTR-------QT---GFTDSEKRMNVAL 845
Query: 789 TRARSLLIIVGN 800
TRA+ L+IVGN
Sbjct: 846 TRAKRHLLIVGN 857
Score = 69 (29.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 463 HMLERLISNEVAGIKENEILRLNA-----TSRPYEDV--PTDFIRFCFFEESIFKCPPRE 515
H+ R ++ +V I +E+ NA S P + PT+F + + +FK E
Sbjct: 69 HLTCRTVTGDVQDITVSELSFPNADKVKHASLPKRKIAIPTEFQSHVHYRQ-VFKAALTE 127
Query: 516 ALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVL 575
L +S + S+LL + I S+ L++ Q+ ES +P+ + V+V+
Sbjct: 128 HLNIMLFELSQRLHSALLKVD-IS----SYTSLEDE-QSESKESCVPVCDHMRPAKVLVV 181
Query: 576 AGDPKQLGPVIYSKDA 591
+ + G + Y+ DA
Sbjct: 182 KKEGQNKGRLFYACDA 197
Score = 47 (21.6 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 419 PPYVIYGPPGTGKTMTLVEAIL---QVYSTREHS--------RILVCAASNSAADHMLER 467
P +I+G G GK+ L IL Q++ + E ++L+ +++N A D +L
Sbjct: 466 PITIIHGVFGAGKSFLLSVVILFLVQLFESSEAKEGAELAPWKLLIASSTNVAVDRILLC 525
Query: 468 LISNEVAG-IKENEILRLNATSRPY 491
L+ I+ I ++ PY
Sbjct: 526 LLDLGFEDFIRVGSIRKITKAILPY 550
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 243 (90.6 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 84/274 (30%), Positives = 142/274 (51%)
Query: 539 KRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGK 598
+ G+ + +DEA Q E ES+ + V++ GD QL ++ S+ E +
Sbjct: 427 RAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLI--GDELQLPAMVQSEVCEKAKFVR 484
Query: 599 SYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLAC---KDDATSLS 655
S ERL G + ++ + YR HP+I P+ FYGG++ K+
Sbjct: 485 SLFERLDSL-----GHKKHLLNV--QYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKR 537
Query: 656 SAKVDIFPNKDFPVLFFGIQGCDE-REGNNPSWFNRFEVSKVVDII-NKLRENTELN-ET 712
+ ++F + F + G+ G +E +G++P N E++ V +I+ N L+ ++E +
Sbjct: 538 FLQGNMFGS--FSFINVGL-GKEEFGDGHSPK--NMVEIAVVSEILTNLLKVSSETKTKM 592
Query: 713 DIGVITPYRQQVLKIKKVL--ETWDMPD----VKVGTVEQFQGQEREVIIVSTVRSTVKH 766
+GVI+PY+ QV I++ + + + D + V +V+ FQG E ++II+STVRS
Sbjct: 593 SVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNG 652
Query: 767 NEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
N +GFLSN +R NVA+TRAR L ++GN
Sbjct: 653 N-------IGFLSNRQRANVALTRARHCLWVIGN 679
Score = 76 (31.8 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
+I+GPPGTG T T+ + + S + +VC +N+A + RL++
Sbjct: 134 LIWGPPGTGNTKTVATLLFALLSLS--CKTVVCTPTNTAVVAVASRLLA 180
Score = 42 (19.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 329 ADEVILKFAKEFHTQHRNGSLYNVSFTYNRINM 361
A ++ F + T+H L N+ NR+ M
Sbjct: 175 ASRLLALFKESSSTEHSTYGLGNIVLVGNRVRM 207
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 149 (57.5 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 712 TDIGVITPYRQQVLKIKKVLETW-------DMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
+DI +ITPY+ Q + K++E + D +GTV+ QG+E EV+I + VRS
Sbjct: 414 SDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMVRSNP 473
Query: 765 KHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
+ +T +GF+S RR NV ITRA+ + +GN +++ +
Sbjct: 474 R-----KT--MGFVSELRRLNVVITRAKRHFMFIGNGYLLAE 508
Score = 114 (45.2 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 34/130 (26%), Positives = 65/130 (50%)
Query: 515 EALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVV 574
E +G R+ +T +S + K+ + +DEA Q E ++ + + K+ +V
Sbjct: 204 EVIGNVRVAFATIGASFVDFVMKHKKFDPCLCIIDEAAQVMEAQTWPAVYKM--KR--IV 259
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDL 634
+AGDPKQL ++++ +A+ FGL S ++R+ E + + ++ L YR + I
Sbjct: 260 MAGDPKQLPALVFTDEAKAFGLQNSVMDRILE----KKNNFSWIM-LENQYRSNAKIATW 314
Query: 635 PSKLFYGGEL 644
+ FY +L
Sbjct: 315 SNTCFYHNQL 324
Score = 104 (41.7 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 41/171 (23%), Positives = 83/171 (48%)
Query: 327 VEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTK 386
+EAD+ L+ K+ Q+ N +Y + N +++ + LE ++ P +
Sbjct: 2 IEADKKFLELVKKNQKQNTN-PVYQYTLEDNP-------ESLTLQDVLESHMTDPIELNS 53
Query: 387 RRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTR 446
S++ +PF+ NE+Q ++++ L + I GPPGTGKT TL + ++ +
Sbjct: 54 FDSMEKEAGIPFS--NEKQRTAIKMALN-ENRKLVCIQGPPGTGKTFTLTLLLCRLIQQK 110
Query: 447 EHSRILVCAASNSAADHMLERLISNEVA---GIKENEILRLNATSRPYEDV 494
+ +++V A + A ++ R+++ + GIK +E ++ Y DV
Sbjct: 111 K--QVVVLAPTREALANI--RMMTKKTLKRMGIKVHEHALMDTNE--YRDV 155
Score = 40 (19.1 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 53 VQGKPQSILVGETSKCSITIQNTTPEPVEVWGIRIY 88
+Q K Q +++ T + I+ T + ++ GI+++
Sbjct: 107 IQQKKQVVVLAPTREALANIRMMTKKTLKRMGIKVH 142
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 267 (99.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 119/424 (28%), Positives = 197/424 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ + +Y T S +L+ + ++SA
Sbjct: 205 LNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILY-TCGFS-VLLTSYTHSA 260
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG-- 518
D++L +L ++ LRL T + ++D+ F EE I + P ++L
Sbjct: 261 VDNILLKLAKFKIG------FLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALL 308
Query: 519 -----RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
+RI+ +T M +N R F +DEA Q S+P + P L Q V
Sbjct: 309 EELYNSHRIVATTCMG---INHPIFSRKTFDFCIVDEASQISQPICLGP---LFFSQRFV 362
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--GYVTKLVR 623
L GD +QL P++ +++A G+ +S +RL + + YR + KL
Sbjct: 363 -LVGDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTY 421
Query: 624 NYR--CHP-----AILDLPSKLFYGGELLACKDDATSLSSAKVDIF-PNKDFPVLFFGIQ 675
+ + C A+++LP+ EL D S + + F PN PV F
Sbjct: 422 DGKLECGSDKVANAVVNLPNLKDVKLELEFYAD--YSENPWMIGAFEPNN--PVCFLNTD 477
Query: 676 GCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E + +K++ + + +DIG+I PYRQQ+ I +L
Sbjct: 478 KVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS 537
Query: 736 MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLL 795
+ V+V TV+++QG+++ +I+VS VRS K L + RR NVAITRA+ L
Sbjct: 538 IRMVEVNTVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKL 591
Query: 796 IIVG 799
I++G
Sbjct: 592 ILLG 595
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 271 (100.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 88/258 (34%), Positives = 135/258 (52%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANL-CTKQTV 572
R L + R++ T + N +K F + LDE Q +EP S++PIA C K
Sbjct: 599 RTLLKQVRVVGVTCAACPFPCMNDLK---FPVVVLDECSQITEPASLLPIARFECEK--- 652
Query: 573 VVLAGDPKQLGPVIYSKDA-ETFGLGKSYLERLFECEFYRNGDEGYVTKLVRN-YRCHPA 630
++L GDPKQL P I DA GL ++ +RL C G+ L+R YRCHPA
Sbjct: 653 LILVGDPKQLPPTIQGSDAAHENGLEQTLFDRL--CLM------GHKPILLRTQYRCHPA 704
Query: 631 ILDLPSKLFYGGELLACKDDATSLS-SAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFN 689
I + + LFY G L+ + T + S ++ P + F+ ++G ++ E +N S+ N
Sbjct: 705 ISAIANDLFYKGALM---NGVTEIERSPLLEWLPT----LCFYNVKGLEQIERDN-SFHN 756
Query: 690 RFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDM--PDVK---VGTV 744
E + + +I L + + + IGVIT Y+ Q+ K+ +L D PD+K V TV
Sbjct: 757 VAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTV 815
Query: 745 EQFQGQEREVIIVSTVRS 762
+ FQG E+E+II+S VR+
Sbjct: 816 DAFQGAEKEIIILSCVRT 833
Score = 221 (82.9 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 67/192 (34%), Positives = 106/192 (55%)
Query: 616 GYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLS-SAKVDIFPNKDFPVLFFG 673
G+ L+R YRCHPAI + + LFY G L+ + T + S ++ P + F+
Sbjct: 689 GHKPILLRTQYRCHPAISAIANDLFYKGALM---NGVTEIERSPLLEWLPT----LCFYN 741
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET 733
++G ++ E +N S+ N E + + +I L + + + IGVIT Y+ Q+ K+ +L
Sbjct: 742 VKGLEQIERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSA 799
Query: 734 WDM--PDVK---VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAI 788
D PD+K V TV+ FQG E+E+II+S VR T +GF+ + +R NVA+
Sbjct: 800 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVR----------TRQVGFIDSEKRMNVAL 849
Query: 789 TRARSLLIIVGN 800
TR + L+IVGN
Sbjct: 850 TRGKRHLLIVGN 861
Score = 48 (22.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 419 PPYVIYGPPGTGKTMTLVEAIL---QVYSTRE-----HSR---ILVCAASNSAADHMLER 467
P +I+G G GK+ L IL Q++ E ++R +L+ +++N A D +L
Sbjct: 470 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLG 529
Query: 468 LIS 470
L+S
Sbjct: 530 LLS 532
Score = 38 (18.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 430 GKTMTLVEAILQVYS-TREHSRILVCAASNSAADHMLERL 468
G T+ L ++QV+ ++ + L+ A A+ +E +
Sbjct: 422 GATLKLASELIQVHKLNKDQATALIQIAQMMASHESIEEV 461
Score = 37 (18.1 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 594 FGLGKSYL 601
FG GKSYL
Sbjct: 478 FGAGKSYL 485
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 267 (99.0 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 119/424 (28%), Positives = 197/424 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ + +Y T S +L+ + ++SA
Sbjct: 594 LNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILY-TCGFS-VLLTSYTHSA 649
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG-- 518
D++L +L ++ LRL T + ++D+ F EE I + P ++L
Sbjct: 650 VDNILLKLAKFKIG------FLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALL 697
Query: 519 -----RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
+RI+ +T M +N R F +DEA Q S+P + P L Q V
Sbjct: 698 EELYNSHRIVATTCMG---INHPIFSRKTFDFCIVDEASQISQPICLGP---LFFSQRFV 751
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--GYVTKLVR 623
L GD +QL P++ +++A G+ +S +RL + + YR + KL
Sbjct: 752 -LVGDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTY 810
Query: 624 NYR--CHP-----AILDLPSKLFYGGELLACKDDATSLSSAKVDIF-PNKDFPVLFFGIQ 675
+ + C A+++LP+ EL D S + + F PN PV F
Sbjct: 811 DGKLECGSDKVANAVVNLPNLKDVKLELEFYAD--YSENPWMIGAFEPNN--PVCFLNTD 866
Query: 676 GCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E + +K++ + + +DIG+I PYRQQ+ I +L
Sbjct: 867 KVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS 926
Query: 736 MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLL 795
+ V+V TV+++QG+++ +I+VS VRS K L + RR NVAITRA+ L
Sbjct: 927 IRMVEVNTVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKL 980
Query: 796 IIVG 799
I++G
Sbjct: 981 ILLG 984
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 267 (99.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 119/424 (28%), Positives = 197/424 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ + +Y T S +L+ + ++SA
Sbjct: 625 LNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILY-TCGFS-VLLTSYTHSA 680
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG-- 518
D++L +L ++ LRL T + ++D+ F EE I + P ++L
Sbjct: 681 VDNILLKLAKFKIG------FLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALL 728
Query: 519 -----RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
+RI+ +T M +N R F +DEA Q S+P + P L Q V
Sbjct: 729 EELYNSHRIVATTCMG---INHPIFSRKTFDFCIVDEASQISQPICLGP---LFFSQRFV 782
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--GYVTKLVR 623
L GD +QL P++ +++A G+ +S +RL + + YR + KL
Sbjct: 783 -LVGDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTY 841
Query: 624 NYR--CHP-----AILDLPSKLFYGGELLACKDDATSLSSAKVDIF-PNKDFPVLFFGIQ 675
+ + C A+++LP+ EL D S + + F PN PV F
Sbjct: 842 DGKLECGSDKVANAVVNLPNLKDVKLELEFYAD--YSENPWMIGAFEPNN--PVCFLNTD 897
Query: 676 GCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWD 735
E + +K++ + + +DIG+I PYRQQ+ I +L
Sbjct: 898 KVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS 957
Query: 736 MPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLL 795
+ V+V TV+++QG+++ +I+VS VRS K L + RR NVAITRA+ L
Sbjct: 958 IRMVEVNTVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKL 1011
Query: 796 IIVG 799
I++G
Sbjct: 1012 ILLG 1015
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 203 (76.5 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 101/360 (28%), Positives = 151/360 (41%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVC-AAS 457
+ LN Q +VE +L ++ GPPGTGKT T+ E I+QV R H+ ++C AAS
Sbjct: 647 DKLNRSQKTAVEHVLNNSIT---ILQGPPGTGKTSTIEEIIIQVIE-RFHAFPILCVAAS 702
Query: 458 NSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRF--CFFE---------- 505
N A D++ E+++ N IK IL + +D P I ++
Sbjct: 703 NIAIDNIAEKIMENRPQ-IKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVA 761
Query: 506 ------ESIFKCPPREALG-RYRIIISTYMSSSLLNTNGIKRGNFSH--------IFLDE 550
E I K + + R+ S ++ T I G + +DE
Sbjct: 762 NKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 551 AGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFY 610
A Q+SE +++P++ + V V GD KQL ET S ER+ Y
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFV--GDEKQLSSFSNIPQLET-----SLFERVLSNGTY 874
Query: 611 RNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVL 670
+N L YR HP I + P K Y GEL KD T A +P P+
Sbjct: 875 KNP-----LMLDTQYRMHPKISEFPIKKIYNGEL---KDGVTDEQKA----WPGVQHPLF 922
Query: 671 FFGIQ-GCDEREGNNP------SWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQ 723
F+ G + R + ++ N+ E ++V II L + ++ +IGVITPY Q
Sbjct: 923 FYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQ 982
Score = 124 (48.7 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 741 VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
V TV+ FQG E+ II S VR+ ++ +GFL + RR NVA+TRA+ LI+VGN
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENK-------IGFLRDKRRLNVALTRAKHGLIVVGN 1090
Query: 801 PHIV 804
+++
Sbjct: 1091 KNVL 1094
Score = 40 (19.1 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 285 AHLLALDVPGLAERRP 300
A+LLAL P ER+P
Sbjct: 535 ANLLALGRPAFNERQP 550
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 271 (100.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 88/258 (34%), Positives = 135/258 (52%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANL-CTKQTV 572
R L + R++ T + N +K F + LDE Q +EP S++PIA C K
Sbjct: 1777 RTLLKQVRVVGVTCAACPFPCMNDLK---FPVVVLDECSQITEPASLLPIARFECEK--- 1830
Query: 573 VVLAGDPKQLGPVIYSKDA-ETFGLGKSYLERLFECEFYRNGDEGYVTKLVRN-YRCHPA 630
++L GDPKQL P I DA GL ++ +RL C G+ L+R YRCHPA
Sbjct: 1831 LILVGDPKQLPPTIQGSDAAHENGLEQTLFDRL--CLM------GHKPILLRTQYRCHPA 1882
Query: 631 ILDLPSKLFYGGELLACKDDATSLS-SAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFN 689
I + + LFY G L+ + T + S ++ P + F+ ++G ++ E +N S+ N
Sbjct: 1883 ISAIANDLFYKGALM---NGVTEIERSPLLEWLPT----LCFYNVKGLEQIERDN-SFHN 1934
Query: 690 RFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDM--PDVK---VGTV 744
E + + +I L + + + IGVIT Y+ Q+ K+ +L D PD+K V TV
Sbjct: 1935 VAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTV 1993
Query: 745 EQFQGQEREVIIVSTVRS 762
+ FQG E+E+II+S VR+
Sbjct: 1994 DAFQGAEKEIIILSCVRT 2011
Score = 221 (82.9 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 67/192 (34%), Positives = 106/192 (55%)
Query: 616 GYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLS-SAKVDIFPNKDFPVLFFG 673
G+ L+R YRCHPAI + + LFY G L+ + T + S ++ P + F+
Sbjct: 1867 GHKPILLRTQYRCHPAISAIANDLFYKGALM---NGVTEIERSPLLEWLPT----LCFYN 1919
Query: 674 IQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET 733
++G ++ E +N S+ N E + + +I L + + + IGVIT Y+ Q+ K+ +L
Sbjct: 1920 VKGLEQIERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSA 1977
Query: 734 WDM--PDVK---VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAI 788
D PD+K V TV+ FQG E+E+II+S VR T +GF+ + +R NVA+
Sbjct: 1978 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVR----------TRQVGFIDSEKRMNVAL 2027
Query: 789 TRARSLLIIVGN 800
TR + L+IVGN
Sbjct: 2028 TRGKRHLLIVGN 2039
Score = 51 (23.0 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 27/130 (20%), Positives = 55/130 (42%)
Query: 478 ENEILRLNATSRPYEDVPTD--FIRFCFFEESIFKCPPREALGRYRIIISTYMSS-SLLN 534
E+ ++ + TS +P D F+ ++S + E L R ++ T + +L
Sbjct: 1016 EDFMVEFSETSLKARTLPDDLHFLNLEGMKKS--RSLENENLQRLSLLSRTQVPLITLPR 1073
Query: 535 TNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETF 594
T+G + SH ++ + S P+ NLC K V+ + +P+ +S+++
Sbjct: 1074 TDGPPDLD-SHSYMINSNTYESSGS--PMLNLCEKSAVLSFSIEPEDQNETFFSEESREV 1130
Query: 595 GLGKSYLERL 604
G L +
Sbjct: 1131 NPGDVSLNNI 1140
Score = 48 (22.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 419 PPYVIYGPPGTGKTMTLVEAIL---QVYSTRE-----HSR---ILVCAASNSAADHMLER 467
P +I+G G GK+ L IL Q++ E ++R +L+ +++N A D +L
Sbjct: 1648 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLG 1707
Query: 468 LIS 470
L+S
Sbjct: 1708 LLS 1710
Score = 38 (18.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 430 GKTMTLVEAILQVYS-TREHSRILVCAASNSAADHMLERL 468
G T+ L ++QV+ ++ + L+ A A+ +E +
Sbjct: 1600 GATLKLASELIQVHKLNKDQATALIQIAQMMASHESIEEV 1639
Score = 37 (18.1 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 594 FGLGKSYL 601
FG GKSYL
Sbjct: 1656 FGAGKSYL 1663
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 165 (63.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 86/290 (29%), Positives = 123/290 (42%)
Query: 537 GIKR-GNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFG 595
GIK N + +DEA Q+SEP ++IP+A ++ +VL GD KQL F
Sbjct: 797 GIKSLNNVRVVIIDEATQSSEPTTLIPLALPSVEK--LVLVGDQKQLS---------CFS 845
Query: 596 LGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLS 655
L + LFE NG L YR HP I + P FYGG LL DA +
Sbjct: 846 LIPNLSLSLFE-RVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGG-LLKDGIDANARQ 903
Query: 656 SAKVDIFPNKDFPVLFFGIQGCDE---REGNNPSWFNRFEVSKVVDIINKLRENTELNET 712
S V P + + RE ++ NR E+ + ++ L +
Sbjct: 904 SEGVISSPLYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPE 963
Query: 713 DIGVITPYRQQVLKIKKVLETWDM--PD---VKVGT-VEQFQGQEREVII--VS--TVRS 762
IG+ITPY Q I L D+ P +K ++ + + V I VS + S
Sbjct: 964 QIGIITPYSGQRDLISATLVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIAS 1023
Query: 763 TVKHNEFDRTY----C--------LGFLSNPRRFNVAITRARSLLIIVGN 800
++ Y C +GFL + RR NVA+TRA+ LI+VG+
Sbjct: 1024 IDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGD 1073
Score = 145 (56.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 51/174 (29%), Positives = 82/174 (47%)
Query: 319 AKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLE-PN 377
+KKG + + E+I+ R + N+ + R+ A++ N
Sbjct: 557 SKKGRRVKKDVIELIIMLHPWSQALPRTVHVSNLKILPASQPVSRVLNAMKTINNASFTR 616
Query: 378 LLFPSQSTKRRSIKAAPFVPFN--SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTL 435
+L + K+ K F+ F +LNE Q + V+ +L V+ GPPGTGKT T+
Sbjct: 617 MLLGKEPIKQIDFKN--FLKFQGQNLNESQKKGVQSVLNNSIT---VLQGPPGTGKTSTI 671
Query: 436 VEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSR 489
E ILQ+ + ILV AASN A D++ E+L++ G +ILR+ A +
Sbjct: 672 YEIILQLLDSLNTYPILVVAASNIAIDNIAEKLMTKH--G---KDILRITAAEK 720
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 256 (95.2 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 79/228 (34%), Positives = 121/228 (53%)
Query: 543 FSHIFLDEAGQASEPESMIPIANL-CTKQTVVVLAGDPKQLGPVIYSKDA-ETFGLGKSY 600
F + LDE Q +EP S++PIA C K ++L GDPKQL P I DA GL ++
Sbjct: 626 FPVVVLDECSQMTEPASLLPIARFECEK---LILVGDPKQLPPTIQGSDAAHENGLEQTL 682
Query: 601 LERLFECEFYRNGDEGYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV 659
+RL C G+ L+R YRCHP I + + LFY G L+ + + S +
Sbjct: 683 FDRL--CLM------GHKPILLRTQYRCHPTISAIANDLFYEGNLM--NGISETERSPLL 732
Query: 660 DIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITP 719
+ P + F+ ++G ++ E N S+ N E + + +I L + + + IGVIT
Sbjct: 733 EWLPT----LCFYNVKGLEQIERGN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITL 786
Query: 720 YRQQVLKIKKVLETWDM--PDVK---VGTVEQFQGQEREVIIVSTVRS 762
Y+ Q+ K+ +L D P++K V TV+ FQG E+E+II+S VR+
Sbjct: 787 YKSQMYKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRT 834
Score = 212 (79.7 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 65/191 (34%), Positives = 103/191 (53%)
Query: 616 GYVTKLVRN-YRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI 674
G+ L+R YRCHP I + + LFY G L+ + + S ++ P + F+ +
Sbjct: 690 GHKPILLRTQYRCHPTISAIANDLFYEGNLM--NGISETERSPLLEWLPT----LCFYNV 743
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETW 734
+G ++ E N S+ N E + + +I L + + + IGVIT Y+ Q+ K+ +L
Sbjct: 744 KGLEQIERGN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAM 801
Query: 735 DM--PDVK---VGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAIT 789
D P++K V TV+ FQG E+E+II+S VR T +GF+ + +R NVA+T
Sbjct: 802 DFDHPNLKAVQVSTVDAFQGAEKEIIILSCVR----------TRQVGFIDSEKRMNVALT 851
Query: 790 RARSLLIIVGN 800
R R L+IVGN
Sbjct: 852 RGRRHLLIVGN 862
Score = 53 (23.7 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 356 YNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEII--L 413
++ IN + +++A L L+ Q K +AA + + + +SVE L
Sbjct: 410 FSNINTKFELLSIEATLKLASELI---QVHKLNKDQAAALIQIAQMMASR-QSVEEAKEL 465
Query: 414 GCKGAPPYVIYGPPGTGKTMTLVEAIL---QVYSTRE-----HSR---ILVCAASNSAAD 462
P +I+G G GK+ L IL Q++ E ++R +L+ +++N A D
Sbjct: 466 AIHTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVD 525
Query: 463 HMLERLIS 470
+L L+S
Sbjct: 526 RVLLGLLS 533
Score = 39 (18.8 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 5 EKDCWDDECSVTGEKREI 22
E C++ CSVTG+ +E+
Sbjct: 69 EYACYN--CSVTGDLQEV 84
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 594 FGLGKSYL 601
FG GKSYL
Sbjct: 479 FGAGKSYL 486
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 265 (98.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 121/419 (28%), Positives = 199/419 (47%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ A++++ S S +L+ + ++SA
Sbjct: 627 LNKPQRQAMKRVLLSKDYT--LIVGMPGTGKTTTIC-ALVRILSACGFS-VLLTSYTHSA 682
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREAL-GR 519
D++L +L +V LRL + + + D+ SI E L
Sbjct: 683 VDNILLKLAKFKVG------FLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNS 736
Query: 520 YRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
+ I+ +T M +N R F +DEA Q S+P + P+ +++ V+V GD
Sbjct: 737 HPIVATTCMG---INHPIFSRKTFDFCIVDEASQISQPVCLGPL--FFSRRFVLV--GDH 789
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--------GYVTKL-V 622
+QL P++ +++A G+ +S +RL E YR + Y KL
Sbjct: 790 QQLPPLVVNREARALGMSESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLEC 849
Query: 623 RNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREG 682
+ R A+L LP+ L D + S A V + P D PV F E
Sbjct: 850 GSDRVANAVLALPNLKDARLSLQLYADYSDSPWLAGV-LEP--DNPVCFLNTDKVPAPEQ 906
Query: 683 NNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVG 742
+ ++++ + + +DIGVI PYRQQ+ I +L + V+V
Sbjct: 907 VENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVN 966
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIVGN 800
TV+++QG+++ +I+VS VRS NE D T LG L + RR NVA+TRA+ LI++G+
Sbjct: 967 TVDKYQGRDKSLILVSFVRS----NE-DGT--LGELLKDWRRLNVALTRAKHKLILLGS 1018
Score = 38 (18.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 229 VRESLANKILPQFLVEGLVRKNYFSFFSTLLVMEELRLEEDMRCH 273
+ E++ +KI + L YFS + +L +E + +++ + H
Sbjct: 419 IPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLES-QSKDNRKTH 462
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 264 (98.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 117/444 (26%), Positives = 206/444 (46%)
Query: 375 EPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT 434
EP + S K LN+ Q ++++ +L K +I G PGTGKT T
Sbjct: 600 EPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTT 657
Query: 435 LVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
+ + +Y+ +L+ + ++SA D++L +L ++ ++ +I +++ + + +
Sbjct: 658 ICTLVRILYACG--FSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPDIQKFTE- 714
Query: 495 PTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQA 554
+ R +SI E L ++I++T +N R F +DEA Q
Sbjct: 715 -EEICR----SKSIKSLALLEELYNSQLIVATTCMG--INHPIFSRKTFDFCIVDEASQI 767
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF----- 609
S+P + P+ +++ V+V GD +QL P++ +++A G+ +S +RL + +
Sbjct: 768 SQPVCLGPL--FFSRRFVLV--GDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQL 823
Query: 610 ---YRNGDE--GYVTKLVRNYR--CHP-----AILDLPSKLFYGGELLACKDDATSLSSA 657
YR + KL + C A+++LP+ EL D S +
Sbjct: 824 TVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYAD--YSENPW 881
Query: 658 KVDIF-PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGV 716
+ F PN PV F E + +K+V + + +DIG+
Sbjct: 882 LIAAFEPNN--PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGI 939
Query: 717 ITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
I PYRQQ+ I +L + V+V TV+++QG+++ +++VS VRS NE D T LG
Sbjct: 940 IAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRS----NE-DGT--LG 992
Query: 777 -FLSNPRRFNVAITRARSLLIIVG 799
L + RR NVAITRA+ LI++G
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
Score = 39 (18.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 47 SVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWGIR 86
S FP +Q S S C+I + N+ +W R
Sbjct: 231 STDFPQMQLSLPSDGSNSNSTCNIEVTNSLDIEESIWSPR 270
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 264 (98.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 117/444 (26%), Positives = 206/444 (46%)
Query: 375 EPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT 434
EP + S K LN+ Q ++++ +L K +I G PGTGKT T
Sbjct: 676 EPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTT 733
Query: 435 LVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
+ + +Y+ +L+ + ++SA D++L +L ++ ++ +I +++ + + +
Sbjct: 734 ICTLVRILYACG--FSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPDIQKFTE- 790
Query: 495 PTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQA 554
+ R +SI E L ++I++T +N R F +DEA Q
Sbjct: 791 -EEICR----SKSIKSLALLEELYNSQLIVATTCMG--INHPIFSRKTFDFCIVDEASQI 843
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF----- 609
S+P + P+ +++ V+V GD +QL P++ +++A G+ +S +RL + +
Sbjct: 844 SQPVCLGPL--FFSRRFVLV--GDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQL 899
Query: 610 ---YRNGDE--GYVTKLVRNYR--CHP-----AILDLPSKLFYGGELLACKDDATSLSSA 657
YR + KL + C A+++LP+ EL D S +
Sbjct: 900 TVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYAD--YSENPW 957
Query: 658 KVDIF-PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGV 716
+ F PN PV F E + +K+V + + +DIG+
Sbjct: 958 LIAAFEPNN--PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGI 1015
Query: 717 ITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG 776
I PYRQQ+ I +L + V+V TV+++QG+++ +++VS VRS NE D T LG
Sbjct: 1016 IAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRS----NE-DGT--LG 1068
Query: 777 -FLSNPRRFNVAITRARSLLIIVG 799
L + RR NVAITRA+ LI++G
Sbjct: 1069 ELLKDWRRLNVAITRAKHKLILLG 1092
Score = 39 (18.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 47 SVPFPFVQGKPQSILVGETSKCSITIQNTTPEPVEVWGIR 86
S FP +Q S S C+I + N+ +W R
Sbjct: 307 STDFPQMQLSLPSDGSNSNSTCNIEVTNSLDIEESIWSPR 346
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 265 (98.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 116/420 (27%), Positives = 197/420 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ A++++ S S +L+ + ++SA
Sbjct: 626 LNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTIC-ALVRILSACGFS-VLLTSYTHSA 681
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIR--FCFFEESIFKCPPREALG 518
D++L +L ++ LRL + + + D+ F C E
Sbjct: 682 VDNILLKLAKFKIG------FLRLGQSHKVHPDIQK-FTEEEMCRLRSIASLAHLEELYN 734
Query: 519 RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGD 578
+ ++ +T M ++ R F +DEA Q S+P + P+ +++ V+V GD
Sbjct: 735 SHPVVATTCMG---ISHPMFSRKTFDFCIVDEASQISQPICLGPL--FFSRRFVLV--GD 787
Query: 579 PKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--------GYVTKL- 621
KQL P++ +++A G+ +S +RL E YR + Y KL
Sbjct: 788 HKQLPPLVLNREARALGMSESLFKRLERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLE 847
Query: 622 VRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDERE 681
+ R A++ LP+ E A D L+ +F D PV F E
Sbjct: 848 CGSDRVANAVITLPNLKDVRLEFYADYSDNPWLAG----VF-EPDNPVCFLNTDKVPAPE 902
Query: 682 GNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKV 741
+ ++++ + + +DIG+I PYRQQ+ I +L + V+V
Sbjct: 903 QIENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAPYRQQLRTITDLLARSSVGMVEV 962
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIVGN 800
TV+++QG+++ +I+VS VRS NE D T LG L + RR NVAITRA+ LI++G+
Sbjct: 963 NTVDKYQGRDKSLILVSFVRS----NE-DGT--LGELLKDWRRLNVAITRAKHKLILLGS 1015
Score = 37 (18.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 18/82 (21%), Positives = 37/82 (45%)
Query: 91 EPANSLTLSLMEPPSG-KPDPQKD--QGFLEGFSIEDRVLQPL--RTLTIWLSCKPKEMG 145
EP + L L L+E SG + P+ + Q + F E + + + R L + + K E G
Sbjct: 2 EPLDDLDLLLLEEDSGAEAVPRMEILQKKADAFFAETVLSRGVDNRYLVLAVETKLNERG 61
Query: 146 LHKSVVQFDIGDDRFERMVLLL 167
+ + + + + ++ +L
Sbjct: 62 AEEKHLLITVSQEGEQEVLCIL 83
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 252 (93.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 113/420 (26%), Positives = 190/420 (45%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ ++++ S +L+ + ++SA
Sbjct: 944 LNKPQKQAMKKVLLSKDYT--LIVGMPGTGKTTTIC-TLVRILHACGFS-VLLTSYTHSA 999
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRY 520
D++L +L ++ LRL + + ++ F + I E L
Sbjct: 1000 VDNILLKLKRFKIG------FLRLGRPQKVHHEI-LPFTEEACRAKGIQTLEELEQLYSR 1052
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
+I++T + R F +DEA Q S+P + I L Q V L GD +
Sbjct: 1053 ELIVATTCMG--VKHPIFSRRRFDFCIVDEASQISQP---VCIGPLFYAQRFV-LVGDHQ 1106
Query: 581 QLGPVIYSKDAETFGLGKSYLERL---------FECEFYRNGDEGYVTKLVR---NYRCH 628
QL P++ + +A + G+ +S +RL ++ N ++ + C
Sbjct: 1107 QLPPIVQNAEARSLGMDESLFKRLEHHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECG 1166
Query: 629 P-----AILDLPSKLFYGGEL--LACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDERE 681
A+L LPS+ EL C+ ++ A ++ PN PV F E
Sbjct: 1167 SEKTANAVLQLPSRAQAEEELELYVCQPQYSAWVQAALE--PNS--PVCFLDTSEVPAPE 1222
Query: 682 GNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKV 741
S + + +V + L DIGVI PYRQQ+ I +L+ ++V
Sbjct: 1223 TVEKSGISNHTEAVLVQGLVTLLLKAGCRACDIGVIAPYRQQLKVISSLLQGDAFKALEV 1282
Query: 742 GTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIVGN 800
TV+++QG+++ VIIVS VRS + N LG L + RR NVAITRA+ L+++G+
Sbjct: 1283 NTVDKYQGRDKSVIIVSFVRSNAEGN-------LGELLQDWRRLNVAITRAKHKLLMLGS 1335
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 246 (91.7 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 96/302 (31%), Positives = 146/302 (48%)
Query: 503 FFEESIFKCPPREALGRYRIIISTYMSSSLLNTN--GIKRGNFSHIFLDEAGQASEPESM 560
F EE I + P ++L ++ Y S ++ T GI FS D +
Sbjct: 684 FTEEEICRSKPIKSLA---LLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQIS 740
Query: 561 IPIA-NLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVT 619
PI VL GD +QL P++ +++A G+ +S +RL E +N V
Sbjct: 741 QPICLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLFKRL---EQNKNA----VV 793
Query: 620 KLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPN-KDFPV-LFFGIQGC 677
+L YR + I+ L +KL Y G+L C D +++A V++ PN KD + L F
Sbjct: 794 QLTVQYRMNSKIMSLSNKLTYDGKL-ECGSD--KVANAVVNL-PNLKDVKLELEFY---A 846
Query: 678 DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMP 737
D E NP FE + V +N + +DIG+I PYRQQ+ I +L +
Sbjct: 847 DYSE--NPWMIGAFEPNNPVCFLNT--DKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIR 902
Query: 738 DVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
V+V TV+++QG+++ +I+VS VRS K L + RR NVAITRA+ LI+
Sbjct: 903 MVEVNTVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKLIL 956
Query: 798 VG 799
+G
Sbjct: 957 LG 958
Score = 166 (63.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 62/211 (29%), Positives = 105/211 (49%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ + +Y T S +L+ + ++SA
Sbjct: 598 LNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILY-TCGFS-VLLTSYTHSA 653
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG-- 518
D++L +L ++ LRL T + ++D+ F EE I + P ++L
Sbjct: 654 VDNILLKLAKFKIG------FLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALL 701
Query: 519 -----RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
+RI+ +T M +N R F +DEA Q S+P + P L Q V
Sbjct: 702 EELYNSHRIVATTCMG---INHPIFSRKTFDFCIVDEASQISQPICLGP---LFFSQRFV 755
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERL 604
L GD +QL P++ +++A G+ +S +RL
Sbjct: 756 -LVGDHQQLPPLVLNREARALGMSESLFKRL 785
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 246 (91.7 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 117/452 (25%), Positives = 212/452 (46%)
Query: 375 EPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT 434
EP + S K LN+ Q ++++ +L K +I G PGTGKT T
Sbjct: 600 EPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTT 657
Query: 435 LVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
+ + +Y+ +L+ + ++SA D++L +L ++ ++ +I +++ + + +
Sbjct: 658 ICTLVRILYACG--FSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTE- 714
Query: 495 PTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQA 554
+ R +SI E L ++I++T +N R F +DEA Q
Sbjct: 715 -QEICR----SKSIKSLALLEELYNSQLIVATTCMG--INHPIFSRKIFDFCIVDEASQI 767
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF----- 609
S+P + P+ +++ V+V GD +QL P++ +++A G+ +S +RL + +
Sbjct: 768 SQPICLGPL--FFSRRFVLV--GDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQL 823
Query: 610 ---YRNGDE--GYVTKLVRNYR--CHP-----AILDLPSKLFYGGEL-LACKDDATSLSS 656
YR + KL + C A+++L + F +L L D + +
Sbjct: 824 TVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINL--RHFKDVKLELEFYADYSD-NP 880
Query: 657 AKVDIF-PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIG 715
+ +F PN PV F E + +K++ + + + +DIG
Sbjct: 881 WLMGVFEPNN--PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIG 938
Query: 716 VITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCL 775
+I PYRQQ LKI L + V+V TV+++QG+++ +++VS VRS N+ D T +
Sbjct: 939 IIAPYRQQ-LKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS----NK-DGT--V 990
Query: 776 G-FLSNPRRFNVAITRARSLLIIVGN-PHIVC 805
G L + RR NVAITRA+ LI++G P + C
Sbjct: 991 GELLKDWRRLNVAITRAKHKLILLGCVPSLNC 1022
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 246 (91.7 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 117/452 (25%), Positives = 212/452 (46%)
Query: 375 EPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT 434
EP + S K LN+ Q ++++ +L K +I G PGTGKT T
Sbjct: 686 EPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTT 743
Query: 435 LVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDV 494
+ + +Y+ +L+ + ++SA D++L +L ++ ++ +I +++ + + +
Sbjct: 744 ICTLVRILYACG--FSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTE- 800
Query: 495 PTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQA 554
+ R +SI E L ++I++T +N R F +DEA Q
Sbjct: 801 -QEICR----SKSIKSLALLEELYNSQLIVATTCMG--INHPIFSRKIFDFCIVDEASQI 853
Query: 555 SEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEF----- 609
S+P + P+ +++ V+V GD +QL P++ +++A G+ +S +RL + +
Sbjct: 854 SQPICLGPL--FFSRRFVLV--GDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQL 909
Query: 610 ---YRNGDE--GYVTKLVRNYR--CHP-----AILDLPSKLFYGGEL-LACKDDATSLSS 656
YR + KL + C A+++L + F +L L D + +
Sbjct: 910 TVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINL--RHFKDVKLELEFYADYSD-NP 966
Query: 657 AKVDIF-PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIG 715
+ +F PN PV F E + +K++ + + + +DIG
Sbjct: 967 WLMGVFEPNN--PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIG 1024
Query: 716 VITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCL 775
+I PYRQQ LKI L + V+V TV+++QG+++ +++VS VRS N+ D T +
Sbjct: 1025 IIAPYRQQ-LKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS----NK-DGT--V 1076
Query: 776 G-FLSNPRRFNVAITRARSLLIIVGN-PHIVC 805
G L + RR NVAITRA+ LI++G P + C
Sbjct: 1077 GELLKDWRRLNVAITRAKHKLILLGCVPSLNC 1108
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 255 (94.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 132/470 (28%), Positives = 222/470 (47%)
Query: 358 RINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKA---APFVPFNS--LNEEQTRSVEII 412
RI+ RM+ + A +L P+ +++ R + P +S + + +T + + I
Sbjct: 913 RIDKDRMFYGLGLARYNVLSLFLPNGASQLRKLVVDLEKPTFTASSWEIPDAETFNPDQI 972
Query: 413 LGCK---GAPPY-VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERL 468
K A Y +I G PGTGKT T++ +++V + S +L+ + +NSA D++L +L
Sbjct: 973 AALKKVFSADDYSLIVGMPGTGKT-TVIAQLIKVLVAQRKS-VLLTSYTNSAVDNILLKL 1030
Query: 469 ISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPR-EALGRYRIIISTY 527
++ E LR+ R ++D+ D+I F++SI R ++I +T
Sbjct: 1031 KDLDI------EFLRIGYPQRVHKDIK-DYIPE--FKDSITTYEQYVNTYMRPKVIATTC 1081
Query: 528 MSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIY 587
+S + + N R +F + +DEA Q + P S+ P+ K+ V+V GD QL P++
Sbjct: 1082 LSITDVCFN--LRYSFDYCIVDEASQITLPVSLGPLR--FAKKFVMV--GDHDQLQPLVT 1135
Query: 588 SKDAET--------FGL-GKSYLERLFECEF-YR-NGDEGYVTK-LVRN--YRCHPAILD 633
D F L K + + + + YR N D V L+ N +C +
Sbjct: 1136 HPDKRVKQELSRSLFSLLAKEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVA 1195
Query: 634 LPSKLFYGGELLAC--KDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGN-NPSWFNR 690
S E+L +D + S IF K+ VLF E N N
Sbjct: 1196 QNSLKIPHPEVLNSFIGEDVSPDSQWIHKIFDEKN-NVLFLDYDAVPAVEENVGEMVINT 1254
Query: 691 FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQ 750
E + I+N L + E +IGV++ YR Q+ +KK L ++ D+++ T +Q+QG+
Sbjct: 1255 KEALLIQQIVNALVHGG-VKEDEIGVMSFYRAQLSVLKKNLN--NLKDLEILTADQYQGR 1311
Query: 751 EREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
++E II+S VRS NE R + + RR NVA TRA++ LII+G+
Sbjct: 1312 DKECIIISLVRS----NE--RKFAGDLMKEYRRLNVATTRAKTKLIILGS 1355
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 334 LKFAKEFHTQHRNGSLYNVSF 354
+K KE+ H SLY++ F
Sbjct: 622 IKTGKEYIYHHAQASLYSLLF 642
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 202 (76.2 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 74/272 (27%), Positives = 126/272 (46%)
Query: 538 IKRGNFSHIF----LDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAET 593
+K N+ F +DEA Q +EP +++P+ T +VL GD +QL V+ SK A
Sbjct: 1376 VKLANYVDFFDICIVDEATQCTEPWTLLPMRFGLTH---MVLVGDMQQLPAVVLSKKAID 1432
Query: 594 FGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDD--- 650
FGL S +R+ + + + K + H + L ++ E+ +
Sbjct: 1433 FGLSNSMFDRI------QRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFY 1486
Query: 651 ATSLSSAKVDI-FPNKDFPVLFFGIQ-GCDEREGNNPSWFNRFEVSKVVDIINKLRENTE 708
L +A+ F + P ++ CD N S N E V ++ ++ ++
Sbjct: 1487 EDQLINAECTARFASPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMP 1546
Query: 709 LNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNE 768
G+I+PY+ Q + +V+ + M ++ TV+ +QG E++VII+S R+
Sbjct: 1547 SKRFSYGLISPYQNQCYALSQVIPS-HM-NITPQTVDSYQGLEKDVIIISNARTRG---- 1600
Query: 769 FDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
C GFL+N +R NVA+TR R L+I GN
Sbjct: 1601 -----C-GFLTNYQRLNVALTRPRRCLVICGN 1626
Score = 109 (43.4 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 378 LLFPSQSTKRRSIKAAPFV--PFNSLNEEQTRSV----EIILGCKGAPPYVIYGPPGTGK 431
+L P+Q+ S+ PF + LNE Q V + I+ +I GPPGTGK
Sbjct: 1147 ILKPTQTVNEVSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGK 1206
Query: 432 TMTLVEAILQ-VYSTREHS---RILVCAASNSAADHML 465
+ + E LQ +Y + +IL+CA SN+A DH++
Sbjct: 1207 SRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIV 1244
Score = 46 (21.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 334 LKFAKEFHTQHRNGSLYNVSFTYNRINMRRMYQAVQAAENLEPNLLFPSQSTKRRSIKAA 393
LK + T+ ++ N++ T + N +R + + A+ N EP + P + ++
Sbjct: 454 LKSCLKSPTKTSVDNMENMTETKSCSNRQR--EQIVASRN-EPTNICPQKIETNKTSTRK 510
Query: 394 PFVPFNSLNEEQTRSVEI 411
FV S +E T S EI
Sbjct: 511 RFVSTTSRDELSTTSKEI 528
Score = 37 (18.1 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 315 ANADAKKGSIYRVEADEVILKFAKEF 340
AN K GS+ V +V++ EF
Sbjct: 978 ANQWLKHGSVDAVAEQDVLMPIPPEF 1003
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 178 (67.7 bits), Expect = 7.2e-16, Sum P(4) = 7.2e-16
Identities = 68/257 (26%), Positives = 124/257 (48%)
Query: 412 ILGCKGAPPY-VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLIS 470
I+ A Y +I+G PGTGKT TLV +++ + R ++L+ + ++++ DH+L + +
Sbjct: 1330 IIKTLSAKDYSLIHGMPGTGKT-TLVISLIHIL-WRLGKKVLITSFTHTSLDHLLLKF-N 1386
Query: 471 NEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPP-REALGRYRIIISTYMS 529
+ I E+LR+ A+S + RF ++S ++ L R +++ ++ +
Sbjct: 1387 KQYPNI---EMLRV-ASS--LNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLG 1440
Query: 530 SSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSK 589
+N + + F + +DEA S+P SM PI C VL GD QL P++ +K
Sbjct: 1441 ---INHQCLLKMQFDYCIIDEASILSQPISMGPILK-CKS---FVLVGDHHQLPPIVNNK 1493
Query: 590 DAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKD 649
+A GL S ++L V+ L YR +I+ L + L Y L+ C +
Sbjct: 1494 EAGKLGLDISLFKQL------STSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLV-CGN 1546
Query: 650 DATSLSSAKVDIFPNKD 666
+ S S + + + N +
Sbjct: 1547 QSISNLSLQTNYYHNNN 1563
Score = 94 (38.1 bits), Expect = 7.2e-16, Sum P(4) = 7.2e-16
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGN 800
T+++FQG++++ II+S VRS K E + + +R NVA TRA+ LI VG+
Sbjct: 1755 TIDKFQGKDKDCIIISFVRSNEK-KEIGE-----LIKDWKRMNVAFTRAKKKLIFVGS 1806
Score = 76 (31.8 bits), Expect = 7.2e-16, Sum P(4) = 7.2e-16
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 661 IFPNKDFPVLFFGIQGCDE--REGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVIT 718
I N + V+F + N ++N+ E + V + N L +N++ IG+IT
Sbjct: 1580 IICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIIT 1639
Query: 719 PYRQQVLKIKK 729
P R Q+ IKK
Sbjct: 1640 PIRFQLNFIKK 1650
Score = 42 (19.8 bits), Expect = 7.2e-16, Sum P(4) = 7.2e-16
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 39 SGEGPVI--ISVPFPFVQGKPQSI-LVGETSKC---SITIQNTTPEPVEVWGIRIYC-SE 91
+ GP ++VPF GKP I + +S+ ++ + + + +E+ GI Y S+
Sbjct: 895 NNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEM-GILYYLKSQ 953
Query: 92 PANSLTLS--LMEP 103
S+ L+ L+ P
Sbjct: 954 EFKSVGLNYGLLHP 967
Score = 40 (19.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 25 IDFQDDHSVLSYD 37
IDFQ+D+ +L+ D
Sbjct: 1313 IDFQNDYPLLNID 1325
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 94/380 (24%), Positives = 175/380 (46%)
Query: 400 SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNS 459
SLN+ Q ++++ +L + +I G PGTGKT T+ A++++ S S +L+ + +++
Sbjct: 643 SLNKPQKQAMKQVLLSRDYT--LIVGMPGTGKTTTIC-ALVRILSACGFS-VLLTSFTHT 698
Query: 460 AADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGR 519
A D++L +L +V LRL + + D+ +SI E L
Sbjct: 699 AVDNILLKLAKFKVG------FLRLGRAQKVHPDIRKFTEEEICRSKSIKSVTDLEELYN 752
Query: 520 YRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDP 579
+ +++T +N + F +DEA Q S+P + P+ C+K+ V+V GD
Sbjct: 753 SQPVVATACMG--INHPIFVQKQFDFCIVDEASQISQPICLGPL--FCSKRFVLV--GDH 806
Query: 580 KQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--GYVTKLVRNYR--C 627
+QL P++ + +A G+ +S +RL + + YR + KLV + C
Sbjct: 807 QQLPPLVQNSEARDLGMSESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLEC 866
Query: 628 HPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSW 687
+ + ++L + S + K + P+K PV F + E
Sbjct: 867 GSEKVSNATANLPNLKMLKLEFADASKTWLKEVLEPDK--PVCFLNTEKVPAPEHTEKGG 924
Query: 688 FNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQF 747
+K+V + L +DIG+I+PYR Q+ I ++ V+V T++++
Sbjct: 925 VCNVTEAKLVFFLTTLFIKAGCRPSDIGIISPYRHQLKVITDLMARLKENRVEVNTIDKY 984
Query: 748 QGQEREVIIVSTVRSTVKHN 767
QG+++ +IIVS VR++ N
Sbjct: 985 QGRDKSIIIVSFVRNSNDEN 1004
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 213 (80.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 56/146 (38%), Positives = 82/146 (56%)
Query: 662 FPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYR 721
+P D P+ F+ QG +E + S+ NR E + V I KL + IG+ITPY
Sbjct: 12 WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK-AGAKPDQIGIITPYE 70
Query: 722 QQ------VLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCL 775
Q ++ L T +V++ +V+ FQG+E++ II+S VR+ NE +
Sbjct: 71 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA----NEHQG---I 123
Query: 776 GFLSNPRRFNVAITRARSLLIIVGNP 801
GFL++PRR NVA+TRAR +IIVGNP
Sbjct: 124 GFLNDPRRLNVALTRARYGVIIVGNP 149
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 228 (85.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 109/446 (24%), Positives = 206/446 (46%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSV---EIILGCKGAPPY-VIYGPPGTGKT 432
+LL +++ K R P +P+ L+++ T ++ E I A Y +I G PGTGKT
Sbjct: 1023 SLLVDNRAPKFRDANDDPVIPYK-LSKDTTLNLNQKEAIDKVMRAEDYALILGMPGTGKT 1081
Query: 433 MTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYE 492
+ E I + S E R+L+ + ++SA D++L +L + ++ ++ +++ ++ Y
Sbjct: 1082 TVIAEIIKILVS--EGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY- 1138
Query: 493 DVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMS-SSLLNTNGIKRGNFSHIFLDEA 551
VP ++ + + + K + ++ +T + + +L T + +F ++ LDEA
Sbjct: 1139 -VP-NYASVKSYNDYLSK------INSTSVVATTCLGINDILFT--LNEKDFDYVILDEA 1188
Query: 552 GQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFE----- 606
Q S P ++ P+ ++ GD QL P++ + A GL +S + E
Sbjct: 1189 SQISMPVALGPLRY----GNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPES 1244
Query: 607 -CEF---YRN-GDEGYVTKLV---RNYRC-HPAILDLPSKLFYGGELLACKDDATSLSSA 657
E YR GD ++ + +C + + +L L ++++ +
Sbjct: 1245 VAELTLQYRMCGDIVTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQW 1304
Query: 658 KVDIF-PNKDFPVLFFGIQGCDE--REGNNPSWFNRFEVSKVVDIINKLRENTELNETDI 714
DI P + V+F C + + + N E + + + + E DI
Sbjct: 1305 LEDILEPTRK--VVFLNYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCE-DI 1361
Query: 715 GVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYC 774
GV+T YR Q+ +KK+ +++ T +QFQG++++ II+S VR + N
Sbjct: 1362 GVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGG----- 1416
Query: 775 LGFLSNPRRFNVAITRARSLLIIVGN 800
L RR NVA+TRA+S LII+G+
Sbjct: 1417 -ALLKELRRVNVAMTRAKSKLIIIGS 1441
Score = 48 (22.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 382 SQSTKRRSIKAAPFVPFNSLNEEQTR 407
S+ TKR+ K F P N+LN + T+
Sbjct: 37 SKQTKRK--KKYAFAPINNLNGKNTK 60
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 120 (47.3 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 23/62 (37%), Positives = 42/62 (67%)
Query: 739 VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
+K+ T++ +QG+E +++I + RS K + +GF+S P+R NV ++RAR +LI++
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSN-KDGD------IGFMSAPQRLNVLLSRARDVLIMI 1012
Query: 799 GN 800
GN
Sbjct: 1013 GN 1014
Score = 120 (47.3 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 74/266 (27%), Positives = 122/266 (45%)
Query: 514 REALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVV 573
R+ L RII T +++ +N + + + + L+EAG+ E + + + TKQ ++
Sbjct: 714 RDVLLSKRIIGCT-TTAAAINASVLNTTSPGVVLLEEAGEILESHVLTALGSH-TKQLIM 771
Query: 574 VLAGDPKQLGPVI--YSKDAETFGLGKSYLERLFECEFYRNGDEGYV-TKLVRNYRCHPA 630
+ GD +QL P I Y+ E G G LFE R + GY + L + +R P
Sbjct: 772 I--GDHQQLRPKINNYALSVEK-GSGYDLNRSLFE----RLVESGYPHSTLAKQHRMAPE 824
Query: 631 ILDLPSKLFYGGELLACKDDATSLSSAKVD---IFPNKDFPVLFFGIQGCDEREGNNP-- 685
I L +L Y +LL T L+ + +F + P F + G +R+G+
Sbjct: 825 ISALVRRLTYP-DLLDGDKTKTRLAPRGLQNRVVFIDHSQPEGF--LHGVSDRDGDGGKG 881
Query: 686 SWFNRFEVSKVVDIINKLRENTELNETD-IGVITPYRQQV--LK--IKK----VLETWDM 736
S N FEV V+ I+ L + TD + ++TPY Q+ L+ ++K VL D
Sbjct: 882 SKQNTFEVKLVLKIVKYLGQQGY--GTDKLVILTPYLGQLHLLREELRKDTDPVLNDLDS 939
Query: 737 PD-VKVGTVEQFQGQE-REVIIVSTV 760
D V+ G + Q + I +ST+
Sbjct: 940 YDLVRAGLISHASAQHVKRPIKLSTI 965
Score = 91 (37.1 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSR--ILVCAASNSAADHMLERLISNEVAGIKEN 479
+I GPPGTGK+ V A++ + +HS+ ILV +N A D LE L+ GI E+
Sbjct: 480 LIQGPPGTGKSF--VGALI-AKALYKHSKETILVMCYTNHALDQFLEDLMD---IGIDES 533
Query: 480 EILRLNATS 488
I+RL + S
Sbjct: 534 AIVRLGSKS 542
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 235 (87.8 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 132/517 (25%), Positives = 232/517 (44%)
Query: 312 LAAANADAKKGSIYRVEADEVILKFAKEFHTQHRNGSLYNVSFTYNRINMRR--MYQAVQ 369
L N D KK ++ ++ L F HT++R + F+ ++R M +
Sbjct: 844 LKMPNFDFKKNQVFFGNYEDSKLSFIGSNHTRYR---IDKDEFSSGIASIRGTLMSSVLP 900
Query: 370 AAENLEPNLLFPSQSTKRRSIKAAPFVP--FNSLNEEQTRSVEIILGCKGAPPY-VIYGP 426
A + +++ + K +A P LNE+Q +++ C A Y +I G
Sbjct: 901 DAPLIIRDMIIRLKPPK--FCNSALIDPEFLKCLNEDQITALK---KCHAAEHYSLILGM 955
Query: 427 PGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNA 486
PGTGKT T+ I + + ++ +IL+ + ++ A D++L +L G ++ I+RL +
Sbjct: 956 PGTGKTTTISSLIRSLLAKKK--KILLTSFTHLAVDNILIKL-----KGC-DSTIVRLGS 1007
Query: 487 TSRPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGI-KRGNFSH 545
P++ P FC E + F +L + SSL + I + F +
Sbjct: 1008 ---PHKIHPL-VKEFCLTEGTTFD--DLASLKHFYEDPQIVACSSLGVYHSIFNKRKFDY 1061
Query: 546 IFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLF 605
+DEA Q P + P+ L K VL GD QL P++ + GL S + L
Sbjct: 1062 CIIDEASQIPLPICLGPL-QLAEK---FVLVGDHYQLPPLVKNSRTSKDGLSLSLFKLLS 1117
Query: 606 ECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELL---------------ACKDD 650
E ++ + VT L YR + I L S+L YGG L+ A D
Sbjct: 1118 E----KHPEA--VTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSD 1171
Query: 651 ATSLSSAK---VDIFPNKDFPVLFFG---IQGCDEREGNNPSWFNRFEVSKVVDIINKLR 704
SS+ V+ N V+FF I G + + N N E + ++
Sbjct: 1172 GLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILE--NHTEAFLIEQAVSSFL 1229
Query: 705 ENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTV 764
E + ++ IG+I+ Y+ QV + K L+++ ++++ TV+++QG+++++I++S VRS
Sbjct: 1230 ERG-VKQSSIGIISIYKSQVELLSKNLKSFT--EIEINTVDRYQGRDKDIILISFVRSNS 1286
Query: 765 KHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIVGN 800
K+ +G L + R NVA++RA+ I+ G+
Sbjct: 1287 KN-------LVGELLRDWHRLNVALSRAKVKCIMFGS 1316
Score = 37 (18.1 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 7 DCWDDECS--VTGEKREIGFIDFQDDHSVL 34
D WDD C GE +F +++VL
Sbjct: 339 DDWDDSCDGCTPGE-----LCEFSSEYTVL 363
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 189 (71.6 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 82/267 (30%), Positives = 127/267 (47%)
Query: 546 IFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQL--GPVIYSKDAETFGLGKSYLER 603
+ ++EA + E I A + T + VV++ GD KQL P ++ +GL S ER
Sbjct: 1464 LIVEEAAEVLEAH--IISAMISTVEHVVMI-GDHKQLRPNPAVHELGV-AYGLRISMFER 1519
Query: 604 LFECEFYRNGDEGY-VTKLVRNYRCHPAILDLPSKL-FYGGELLACKDDATSLSSAKVDI 661
L E G ++L + +R + I D KL FY D+ T + V +
Sbjct: 1520 LVE--------RGLPFSQLRQQHRMNLTISDKIVKLSFY--------DNVTDAEN--VGL 1561
Query: 662 FPNKDFPV--LFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKL-RENTELNETDIGVIT 718
+P+ LFF E + SW N+ E+S V ++ L ++N N DI V+
Sbjct: 1562 YPDVQGMATNLFFWSHTSMEESPDEVSWLNKHEISMTVALVKHLLKQNYTTN--DIVVLA 1619
Query: 719 PYR-QQVLKIKKVLETW-DMPD---VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTY 773
Y Q+ L ++ + PD + V TV+ FQG+ER+++IVS VRS H
Sbjct: 1620 TYSAQKNLMYREYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRS---HRGGRENT 1676
Query: 774 CLGFLSNPRRFNVAITRARSLLIIVGN 800
+GFL+ R VA+TRA+ + I+GN
Sbjct: 1677 GIGFLAVANRICVALTRAQHGMYIIGN 1703
Score = 89 (36.4 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRI----LVCAASNSAADHMLERL---ISNEVA 474
+I GPPGTGKT V+ + + R + +I LV +NS D++LER+ I N+
Sbjct: 1058 LIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLERIYQMIENDEE 1117
Query: 475 GIKEN 479
K+N
Sbjct: 1118 LSKDN 1122
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 116 (45.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIP--IANLCTKQTVVV 574
L RY +I S+ + S++N+ G K ++ +DEA Q + ++P +A C K ++V
Sbjct: 310 LKRYPVIGSS--THSIVNSLGGK-AVLDYVIIDEASQ----QDIVPGVLALSCAKNLIIV 362
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRN--------GDEGYVTKLVRNYR 626
GD KQL + E GL ++CE Y GD +T L +YR
Sbjct: 363 --GDRKQLAHI-----PEKLGLEAP--APWYDCETYSLLDSCVGVFGDSIPMTLLKEHYR 413
Query: 627 CHPAILDLPSKLFYGGELLACKDDA 651
CHP I+ ++ FY +L+ DA
Sbjct: 414 CHPRIIQFCNQQFYDNQLVPMTQDA 438
Score = 96 (38.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQ 748
N E+ ++ +++ E+ E G I P++ Q L + D TV +FQ
Sbjct: 459 NLRELDSLLAVLDGSGESIWEGEDGRGFIAPFKNQATLSGSCLPADFIND----TVHKFQ 514
Query: 749 GQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIV 798
G+E + I+ STV KH +R L F+ + R NVA++RA++ +V
Sbjct: 515 GRECDEIVFSTVLD--KHKSPER---LSFVDDARMVNVAVSRAKNRFTLV 559
Score = 91 (37.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 397 PFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAA 456
PF LNE Q ++VE + + +I GPPGTGKT T++ I + + + V +
Sbjct: 27 PFG-LNESQLKAVEQAFSSQIS---LIEGPPGTGKTQTILNIIANILL--QGKTVAVVSN 80
Query: 457 SNSAADHMLERL----ISNEVA--GIKEN-EILRLNATSRPYED 493
+N+A ++ E+L + VA G KEN E + RP D
Sbjct: 81 NNAAVKNVYEKLGKCGLDYLVARLGNKENRETFFAERSLRPSVD 124
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 150 (57.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 678 DEREGNNPSWFNRFEVSKVVDIINKLRE-NTELNETDIGVITPYRQQVLKIK-KVLE--- 732
+E +GN N E VV ++ L NE IGV+T YR Q+ +K K+L
Sbjct: 1446 EEAKGNRI--VNPVEAQLVVQLVESLMTLGVPANE--IGVMTHYRSQLALLKHKLLRGKN 1501
Query: 733 TWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRAR 792
T D V++ T ++FQG+++EV+++S VRS NE + L + RR NVA TRA+
Sbjct: 1502 TGDATAVEMHTADRFQGRDKEVVVLSLVRS----NE--ACHIGDLLRDWRRINVAFTRAK 1555
Query: 793 SLLIIVGN 800
+ L+++G+
Sbjct: 1556 TKLLVIGS 1563
Score = 112 (44.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 400 SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNS 459
SLN +Q ++VE ++ K ++ G PGTGKT T+ I + R+ +L+ + ++S
Sbjct: 1149 SLNVDQKKAVEKVMSAKDYA--LVLGMPGTGKTTTIAHIIRALI--RQGKSVLLTSYTHS 1204
Query: 460 AADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGR 519
A D++L +L + + +LRL A ++ + +V +F + F+ R A
Sbjct: 1205 AVDNILLKLKGDSIP------VLRLGAPAKVHPEVQ-EFATLAAQPMNSFE-EIRTAWHD 1256
Query: 520 YRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPI 563
++ +T + S N +R F + +DEA Q + P + PI
Sbjct: 1257 LPVVATTCLGISHPLFN--ER-TFDYCIVDEASQITLPICLGPI 1297
Score = 111 (44.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 446 REHSRILVCAASNSAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFE 505
R+ +L+ + ++SA D++L +L + + +LRL A ++ + +V +F
Sbjct: 1191 RQGKSVLLTSYTHSAVDNILLKLKGDSIP------VLRLGAPAKVHPEVQ-EFATLAAQP 1243
Query: 506 ESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIAN 565
+ F+ R A ++ +T + S N +R F + +DEA Q + P + PI
Sbjct: 1244 MNSFE-EIRTAWHDLPVVATTCLGISHPLFN--ER-TFDYCIVDEASQITLPICLGPIRM 1299
Query: 566 LCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNY 625
T VL GD QL P++ +++A GL S + L + + D V L Y
Sbjct: 1300 ART----FVLVGDHNQLPPLVQNEEARKGGLDVSLFKLLSDT----HPDS--VVNLEHQY 1349
Query: 626 RCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDI-FP 663
R ++ L ++L Y G L K L K+DI FP
Sbjct: 1350 RMCEDVMALSNELIYEGHL---KCGTEELRLRKLDIPFP 1385
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 195 (73.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 97/368 (26%), Positives = 175/368 (47%)
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALG 518
SA D++L +L ++ ++ +I +++ + + + + R +SI E L
Sbjct: 2 SAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTE--QEICR----SKSIKSLALLEELY 55
Query: 519 RYRIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGD 578
++I++T +N R F +DEA Q S+P + P+ +++ V+V GD
Sbjct: 56 NSQLIVATTCMG--INHPIFSRKIFDFCIVDEASQISQPICLGPL--FFSRRFVLV--GD 109
Query: 579 PKQLGPVIYSKDAETFGLGKSYLERLFECEF--------YRNGDE--GYVTKLVRNYR-- 626
+QL P++ +++A G+ +S +RL + + YR + KL +
Sbjct: 110 HQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLE 169
Query: 627 CHP-----AILDLPSKLFYGGEL-LACKDDATSLSSAKVDIF-PNKDFPVLFFGIQGCDE 679
C A+++L + F +L L D + + + +F PN PV F
Sbjct: 170 CGSDKVANAVINL--RHFKDVKLELEFYADYSD-NPWLMGVFEPNN--PVCFLNTDKVPA 224
Query: 680 REGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDV 739
E + +K++ + + + +DIG+I PYRQQ LKI L + V
Sbjct: 225 PEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQ-LKIINDLLARSIGMV 283
Query: 740 KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIV 798
+V TV+++QG+++ +++VS VRS N+ D T +G L + RR NVAITRA+ LI++
Sbjct: 284 EVNTVDKYQGRDKSIVLVSFVRS----NK-DGT--VGELLKDWRRLNVAITRAKHKLILL 336
Query: 799 GN-PHIVC 805
G P + C
Sbjct: 337 GCVPSLNC 344
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 143 (55.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 80/299 (26%), Positives = 125/299 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIA--NLCTKQTV---VV 574
RII T +++ G ++ +I ++EA Q +E ES IP A N+ Q +V
Sbjct: 1037 RIIAMTSTHAAMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPLKRIV 1096
Query: 575 LAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDL 634
L GD Q P+I + + ++ E+ R G +T L + R P+I +L
Sbjct: 1097 LCGDHLQNSPIIQNLAFRQY----AHFEQSLFLRLIRLGVPA-IT-LDQQGRARPSIAEL 1150
Query: 635 PSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGI---QGCDEREGNNPSWFNRF 691
+ L + A A F F + QG ERE N
Sbjct: 1151 FRWRYQNLGNLPIVEQAPEFKQANAGF----QFEYQFINVPDYQGTGEREPTPHFVQNLG 1206
Query: 692 EVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLE-------TWDMPDVKVGTV 744
E V I +R + I ++ Y Q IK VL + MP + V TV
Sbjct: 1207 EAEYAVAIFQYMRL-LGYPASKISILATYAGQTALIKDVLNHRCSKNTLFGMPKI-VTTV 1264
Query: 745 EQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHI 803
+++QG++ + II+S R+ RT +G+L + RR VA++RAR L I+G +
Sbjct: 1265 DRYQGEQNDYIILSLTRT--------RT--VGYLRDVRRLTVALSRARLGLYILGRREV 1313
Score = 102 (41.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 401 LNEEQTRSVEIILGCKGAPP--YVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN 458
LN + +I G P VI GPPGTGKT + I +Y R L+ A SN
Sbjct: 803 LNAVRFTPAQIQAIASGTQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLLVAHSN 862
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRF 501
A + + +++++ + I E +LRL D T + ++
Sbjct: 863 QALNQLFQKIVALD---IDERHLLRLGHGEEEL-DTETSYSKY 901
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 188 (71.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 62/188 (32%), Positives = 96/188 (51%)
Query: 614 DEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFG 673
++ V +L YR + I+ L +KL Y G+L C + S ++A + PN L F
Sbjct: 785 NQNAVVQLTVQYRMNSKIMSLSNKLVYEGKL-ECGSEKVSNATANL---PNLKMLKLEFA 840
Query: 674 IQGCDEREGNNPSWFNR-FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLE 732
D + +W E K V +N E +DIG+I+PYR Q+ I ++
Sbjct: 841 ----DASK----TWLKEVLEPDKPVCFLNT--EKAGCRPSDIGIISPYRHQLKVITDLMA 890
Query: 733 TWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRA 791
V+V T++++QG+++ +IIVS VR++ N LG L + RR NVAITRA
Sbjct: 891 RLKENRVEVNTIDKYQGRDKSIIIVSFVRNSNDEN-------LGALLKDWRRLNVAITRA 943
Query: 792 RSLLIIVG 799
+ LI+VG
Sbjct: 944 KHKLIMVG 951
Score = 185 (70.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 68/259 (26%), Positives = 128/259 (49%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L + +I G PGTGKT T+ A++++ S S +L+ + +++A
Sbjct: 595 LNKPQKQAMKQVLLSRDYT--LIVGMPGTGKTTTIC-ALVRILSACGFS-VLLTSFTHTA 650
Query: 461 ADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRFCFFEESIFKCPPREALGRY 520
D++L +L +V LRL + + D+ +SI E L
Sbjct: 651 VDNILLKLAKFKVG------FLRLGRAQKVHPDIRKFTEEEICRSKSIKSVTDLEELYNS 704
Query: 521 RIIISTYMSSSLLNTNGIKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPK 580
+ +++T +N + F +DEA Q S+P + P+ C+K+ V+V GD +
Sbjct: 705 QPVVATACMG--INHPIFVQKQFDFCIVDEASQISQPICLGPL--FCSKRFVLV--GDHQ 758
Query: 581 QLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFY 640
QL P++ + +A G+ +S +RL + ++ V +L YR + I+ L +KL Y
Sbjct: 759 QLPPLVQNSEARDLGMSESLFKRLEQ-------NQNAVVQLTVQYRMNSKIMSLSNKLVY 811
Query: 641 GGELLACKDDATSLSSAKV 659
G+L C + S ++A +
Sbjct: 812 EGKL-ECGSEKVSNATANL 829
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 171 (65.3 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 62/238 (26%), Positives = 111/238 (46%)
Query: 570 QTVVVLAGDPKQLGPVIYSKDAETFGLGKSYL-ERLFECEFYRNGDEGYVTKLVRNYRCH 628
+T ++L GD QL P Y++DA L ++ + E L R ++T++ +RC
Sbjct: 340 KTRIILVGDMHQLPP--YTEDALPAELKRAAVGEPLTLAVKGRRWSSMHLTRV---HRCP 394
Query: 629 PAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWF 688
I DL +FYG L + + + + P+ P +F + G S+
Sbjct: 395 KMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSHH-PFVFVNYISQQTQVGK--SFS 451
Query: 689 NRFEVSKVVDIINKLRENT-ELNET-DIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQ 746
N E + ++ L+ + E N T + V+ Y Q + + E V+V T++
Sbjct: 452 NENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYVYSIAED----GVRVNTIDG 507
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
QGQE +V IV RS + ++++ FL NP R NVA++R++ +++G H++
Sbjct: 508 CQGQEYDVSIVLLTRS----DPYEKSK---FLVNPNRINVALSRSKMATVVIGQRHLI 558
Score = 53 (23.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 400 SLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN- 458
+L+EEQ++ + + K + GTGKT T + L + +++ +N
Sbjct: 129 TLSEEQSQFIRTVKRLK-FDCLALDCAFGTGKTTTAILGGLHYAKEHPNRKMIFTGVTNA 187
Query: 459 --SAADHMLERLISNE 472
SAA L+RL NE
Sbjct: 188 CSSAAVETLQRLDPNE 203
Score = 40 (19.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 388 RSIKAAPFVPFNSLNEE 404
R +KAA +PFN++ +E
Sbjct: 260 RLLKAAVKLPFNTIPKE 276
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 171 (65.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 45/132 (34%), Positives = 68/132 (51%)
Query: 668 PVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKI 727
PV F + E + + +K+V + KL +DIG+I PYRQQ+ I
Sbjct: 886 PVCFLNTEKIPALETEEKGGISNWIEAKLVFCLTKLFLKAGCRPSDIGIIAPYRQQLKVI 945
Query: 728 KKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVA 787
+ V+V TV+++QG+++ VIIVS VRS + D L + RR NVA
Sbjct: 946 SNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGD------LLKDWRRLNVA 999
Query: 788 ITRARSLLIIVG 799
+TRA+ LI++G
Sbjct: 1000 LTRAKHKLIMLG 1011
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSA 460
LN+ Q ++++ +L K +I G PGTGKT T+ + ++ + + LV +A
Sbjct: 627 LNKPQKQAMKRVLLSKDYT--LIVGMPGTGKTTTICTLVSTLH-LKTCTSCLVDDHREAA 683
Query: 461 ADHMLERLISNEVAGIKENEILRLNATS 488
H R V K+ R+ +T+
Sbjct: 684 GTHRSHRHSKGTVNLGKQKRQHRVTSTT 711
Score = 41 (19.5 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 248 RKNYFSFFSTLLVMEELRL 266
+ NY FF +L++++L L
Sbjct: 754 QNNYIIFFDNILLLKKLPL 772
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 66/241 (27%), Positives = 111/241 (46%)
Query: 540 RGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKDAETFGLGKS 599
R F +DEA Q S+P + P+ +++ V+V GD +QL P++ +++A G+ +S
Sbjct: 10 RKTFDFCIVDEASQISQPICLGPL--FFSRRFVLV--GDHQQLPPLVLNREARALGMSES 65
Query: 600 YLERLFECEF--------YRNGDE--------GYVTKL-VRNYRCHPAILDLPSKLFYGG 642
+RL + + YR + Y KL + + A+++LP
Sbjct: 66 LFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPKLKDVKL 125
Query: 643 ELLACKDDATSLSSAKVDIF-PNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIIN 701
EL D S + V F PN PV F E + +K+V +
Sbjct: 126 ELEFYAD--YSENPWMVGAFEPNN--PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLT 181
Query: 702 KLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVIIVSTVR 761
+ N +IG+I PYRQQ+ I +L + V+V TV+++QG+++ +I+VS VR
Sbjct: 182 SIFVKAGCNPCNIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSFVR 241
Query: 762 S 762
S
Sbjct: 242 S 242
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 135 (52.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 57/192 (29%), Positives = 86/192 (44%)
Query: 619 TKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV-DIFPNKDFPVLFFGIQGC 677
T+L R HP I L S ++ +D + K P FF
Sbjct: 773 TRLTMQRRMHPQIRRLVSSVY---------EDLSDYEITKYWPSIPGMGEIRRFFLTHSR 823
Query: 678 DEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVL-ETWDM 736
E S N FE +V L N + I +T Y Q I+++L E+ +
Sbjct: 824 IEDNDGFASKINLFEAQMLVQFAVYLINNG-VEPQKITCLTFYAAQKDLIERLLSESLNR 882
Query: 737 PD--VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSL 794
+KV TV+ +QG+E +V+++S VR+ DRT +GFLS+P R V+++RAR
Sbjct: 883 EKHFIKVATVDGYQGEENDVVLLSLVRNN------DRTE-VGFLSSPHRVCVSLSRARRG 935
Query: 795 LIIVGNPHIVCQ 806
L I GN +V +
Sbjct: 936 LFIFGNAQLVAE 947
Score = 122 (48.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 66/231 (28%), Positives = 97/231 (41%)
Query: 538 IKRGNFSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGP--VIYSKDAETFG 595
++R N F++EA E +IP +Q +VL GD KQL P Y+ + F
Sbjct: 700 LERINPKICFIEEAADVLEGP-IIPAVFPSLEQ--LVLIGDHKQLRPGCSTYALRQDPFN 756
Query: 596 LGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLS 655
L S ERL E D Y T+L R HP I L S ++ +D +
Sbjct: 757 LSISMFERLVE------NDMEY-TRLTMQRRMHPQIRRLVSSVY---------EDLSDYE 800
Query: 656 SAKV-DIFPNKDFPVLFFGIQGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDI 714
K P FF E S N FE +V L N + I
Sbjct: 801 ITKYWPSIPGMGEIRRFFLTHSRIEDNDGFASKINLFEAQMLVQFAVYLINNG-VEPQKI 859
Query: 715 GVITPYRQQVLKIKKVL-ETWDMPD--VKVGTVEQFQGQEREVIIVSTVRS 762
+T Y Q I+++L E+ + +KV TV+ +QG+E +V+++S VR+
Sbjct: 860 TCLTFYAAQKDLIERLLSESLNREKHFIKVATVDGYQGEENDVVLLSLVRN 910
Score = 86 (35.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 422 VIYGPPGTGKTMTLVEAILQVY-STREHSR-ILVCAASNSAADHMLERLI 469
+I GPPGTGK+ ++AI + +T H ILV +N A D +L RL+
Sbjct: 390 IIQGPPGTGKSFVTLKAIETLLENTHSHVLPILVACQTNHAVDQILIRLL 439
Score = 40 (19.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 306 DFVFVKLAAANADAKK-GSIYRVEADEV--ILKFAKEFHTQHRNGSLYN 351
D + ++L A + GS R + E+ + F K HT+H + YN
Sbjct: 432 DQILIRLLHQGASVMRLGS--RTKDPEIAAVTIFQKAKHTKHSFKAAYN 478
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 114 (45.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 74/300 (24%), Positives = 122/300 (40%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIA--NLCTKQTVV---V 574
+II T ++L +K G + +I ++EA Q E E+ IP+ N + +
Sbjct: 1035 KIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNRLKRWI 1094
Query: 575 LAGDPKQLGPVIYSKDAETFG-LGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
+ GD QL PV+ ++ + + + +S RL +L R R I +
Sbjct: 1095 MIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPN-------VQLDRQGRARAQIAE 1147
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPS---WFNR 690
L + G L D +A FP F I + PS + N
Sbjct: 1148 LYQWRYNGLGNLPHVDGLPQFQNANAGFA----FPFQFIDIPDFNGHGETQPSPHFYQNL 1203
Query: 691 FEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET-WD------MPDVKVGT 743
E + +R E I ++T Y Q I+ V + D MP KV T
Sbjct: 1204 GEAEYACALYTYMRILGYPAEK-ISILTTYNGQAQLIRDVFQRRCDTNPLIGMP-AKVST 1261
Query: 744 VEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHI 803
V+++QGQ+ + II+S V++ N +G + + RR VA++RAR L ++G +
Sbjct: 1262 VDKYQGQQNDFIILSLVKT---RN-------IGHIRDVRRLVVALSRARLGLYVLGRSKV 1311
Score = 110 (43.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y + R L+ SN A + + E++I+ +V E +
Sbjct: 824 MVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKIIALDV---DERHL 880
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LR+ E DF R+
Sbjct: 881 LRMGHGEEALE-TEKDFSRY 899
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 129 (50.5 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 72/290 (24%), Positives = 132/290 (45%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTV------- 572
+I+ T ++L + ++ G + ++ ++E+ Q E E+ IP+ L +Q
Sbjct: 1094 KIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPM--LLQRQEDGHARLKR 1151
Query: 573 VVLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAIL 632
+L GD QL PV+ + + + S++++ F R G Y+ +L R P++
Sbjct: 1152 CILIGDHHQLPPVVKNMAFQKY----SHMDQSLFTRFVRLGIP-YI-ELNAQGRARPSLA 1205
Query: 633 DLPSKLFYG-GELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPS-WF-- 688
L + + G+L K+ A A + ++ ++ + + R + PS WF
Sbjct: 1206 KLYNWRYRDLGDLSIVKE-APIFQRANAGF--SYEYQLV--NVPDYEGRGESTPSPWFYQ 1260
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMP------DVKVG 742
N+ E +V + +R I ++T Y Q L I+ V+ +P KV
Sbjct: 1261 NQGEAEYIVSVYIYMRL-LGYPANKISILTTYNGQKLLIRDVINRRCVPYPFIGPPSKVT 1319
Query: 743 TVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRAR 792
TV++FQGQ+ + I++S VR T +G L + RR VA++RAR
Sbjct: 1320 TVDKFQGQQNDFILLSLVR----------TRFVGHLRDVRRLVVAMSRAR 1359
Score = 100 (40.3 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN 458
NS+ T+ II G + V+ GPPGTGKT T V+ + +Y R L+ SN
Sbjct: 862 NSVKFTPTQVGAIISGIQPGLTMVV-GPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSN 920
Query: 459 SAADHMLERLISNEV 473
A + + E+++ +V
Sbjct: 921 QALNDLFEKIMERDV 935
Score = 37 (18.1 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 57 PQSILVGETSKCSITIQ-NTTPEPVEVWGIRIYCSEPANSLTLSLMEPPSGKPDPQKDQ 114
P I + +T K + I N E + + + P L + PP P PQ DQ
Sbjct: 801 PFRITLPKTLKGNGAISGNKISEVNPADNVNMVDASPKEKLIVEAYTPPDPGPYPQ-DQ 858
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 155 (59.6 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 44/114 (38%), Positives = 70/114 (61%)
Query: 694 SKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQERE 753
+K++ + + + +DIG+I PYRQQ LKI L + V+V TV+++QG+++
Sbjct: 679 AKLIVFLTSIFVKAGCSPSDIGIIAPYRQQ-LKIINDLLARSIGMVEVNTVDKYQGRDKS 737
Query: 754 VIIVSTVRSTVKHNEFDRTYCLG-FLSNPRRFNVAITRARSLLIIVGN-PHIVC 805
+++VS VRS N+ D T +G L + RR NVAITRA+ LI++G P + C
Sbjct: 738 IVLVSFVRS----NK-DGT--VGELLKDWRRLNVAITRAKHKLILLGCVPSLNC 784
Score = 56 (24.8 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 375 EPNLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMT 434
EP + S K LN+ Q ++++ +L K +I G PGTGKT T
Sbjct: 600 EPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTT 657
Query: 435 L 435
+
Sbjct: 658 I 658
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 148 (57.2 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 69/256 (26%), Positives = 114/256 (44%)
Query: 553 QASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD-AETFGLGKSYLERLFECEFYR 611
+A+E IA L ++L GD +QL P D A+ F L S ERL +
Sbjct: 1000 EAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNI-- 1057
Query: 612 NGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLF 671
+V +L +R P I L + Y + L K + N LF
Sbjct: 1058 ----PFV-RLNYQHRMRPEIARLLTPHIY--QDLENHPSVLKYEQIK-GVSSN-----LF 1104
Query: 672 FGIQGCDERE-GNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKV 730
F E+E S N+ E VV++ L L + I ++T Y Q+ ++K+
Sbjct: 1105 FVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYL-PSQITILTTYTGQLFCLRKL 1163
Query: 731 LETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITR 790
+ +KV V+++QG+E ++I++S VRS N+ + +GFL P R VA++R
Sbjct: 1164 MPVKTFAGIKVHVVDKYQGEENDIILLSLVRS----NQEGK---VGFLQIPNRICVALSR 1216
Query: 791 ARSLLIIVGNPHIVCQ 806
A+ + +GN ++ +
Sbjct: 1217 AKKGMYCIGNMQMLAK 1232
Score = 77 (32.2 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 401 LNEEQTRSVEIILGCKGAPPYVIYGPPGTGKT---MTLVEAIL---QVYSTREHS-RILV 453
L++ Q +++ L + A +I GPPGTGKT + +V+A+L V+ + ILV
Sbjct: 591 LDDSQMEALQFALTKELA---IIQGPPGTGKTYVGLKIVQALLTNKSVWQINTQTFPILV 647
Query: 454 CAASNSAADHMLERLISNEVAGIKENEILRLNATS 488
+N A D LE + G ++ I+R+ S
Sbjct: 648 VCYTNHALDQFLEGIY-----GCQKTSIVRVGGRS 677
Score = 43 (20.2 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 92 PANSLTLSLMEPPSGKPDPQKDQGFLEGFSIEDRVLQ--PLRT-LTIWLSCKPKEMGLHK 148
P +S T P KP Q Q G+ + +LQ P +T+ S KE+ H
Sbjct: 111 PWSSDTFQQWHTPPQKPGEQPQQTKRLGYKFLESLLQKEPSEVAITLATSLGLKELLSHS 170
Query: 149 SV 150
S+
Sbjct: 171 SM 172
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 261 MEELRLEEDMRC-HSMECVTMRRKGA 285
M ELRL+ED+ E V M GA
Sbjct: 956 MAELRLQEDLHILKDAEVVGMTTTGA 981
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 477 KENEILRLNAT--SRPYEDVPTDFIRFCFFEES 507
K+N L AT +R +ED+ ++ CF E+S
Sbjct: 451 KDNFETFLFATVSNREHEDLCQGIVQLCFNEQS 483
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 108 (43.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 876
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 877 LRLGHGEEELE-TEKDFSRY 895
Score = 108 (43.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 75/291 (25%), Positives = 122/291 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1091
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1092 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1145
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1146 LYNWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1203
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ + P + KV TV++
Sbjct: 1204 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDR 1262
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
FQGQ+ + I++S VR T +G L + RR VA++RAR L I
Sbjct: 1263 FQGQQNDYILLSLVR----------TRAVGHLRDVRRLVVAMSRARLGLYI 1303
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 108 (43.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 876
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 877 LRLGHGEEELE-TEKDFSRY 895
Score = 108 (43.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 75/291 (25%), Positives = 122/291 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 1037 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1095
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1096 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1149
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1150 LYNWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1207
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ + P + KV TV++
Sbjct: 1208 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDR 1266
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
FQGQ+ + I++S VR T +G L + RR VA++RAR L I
Sbjct: 1267 FQGQQNDYILLSLVR----------TRAVGHLRDVRRLVVAMSRARLGLYI 1307
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 108 (43.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 876
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 877 LRLGHGEEELE-TEKDFSRY 895
Score = 108 (43.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 75/291 (25%), Positives = 122/291 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1091
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1092 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1145
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1146 LYNWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1203
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ + P + KV TV++
Sbjct: 1204 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDR 1262
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
FQGQ+ + I++S VR T +G L + RR VA++RAR L I
Sbjct: 1263 FQGQQNDYILLSLVR----------TRAVGHLRDVRRLVVAMSRARLGLYI 1303
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 108 (43.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 803 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 859
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 860 LRLGHGEEELE-TEKDFSRY 878
Score = 107 (42.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 75/291 (25%), Positives = 121/291 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 1015 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1073
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1074 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1127
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1128 LYNWRYKNLGNLPHVQLLLEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1185
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ P + KV TV++
Sbjct: 1186 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDR 1244
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
FQGQ+ + I++S VR T +G L + RR VA++RAR L I
Sbjct: 1245 FQGQQNDYILLSLVR----------TRAVGHLRDVRRLVVAMSRARLGLYI 1285
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 107 (42.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 75/291 (25%), Positives = 121/291 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 1032 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1090
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1091 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1144
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1145 LYNWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1202
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ P + KV TV++
Sbjct: 1203 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDR 1261
Query: 747 FQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
FQGQ+ + I++S VR T +G L + RR VA++RAR L I
Sbjct: 1262 FQGQQNDYILLSLVR----------TRAVGHLRDVRRLVVAMSRARLGLYI 1302
Score = 104 (41.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y E R L+ SN A + + E++++ + I E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHFPEQ-RTLIVTPSNPALNQLFEKIMALD---IDERHL 875
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 876 LRLGHGEEELE-TEKDFSRY 894
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 150 (57.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 60/234 (25%), Positives = 104/234 (44%)
Query: 573 VVLAGDPKQLGPVIYSKDAETFGLGKSYL-ERLFECEFYRNGDEGYVTKLVRNYRCHPAI 631
++L GD QL P Y ++A L ++ + E L R ++T++ +RC I
Sbjct: 244 MILVGDMHQLPP--YMEEALPAELKRAAIGEPLTLAVKGRRWPSMHLTRV---HRCPKMI 298
Query: 632 LDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQGCDEREGNNPSWFNRF 691
++ LFYG L + K T + K P++ P++F G S+ N
Sbjct: 299 TEVLGDLFYGNTLTSSKPGVTDIPVLKAMGLPSRH-PMVFVNYTSPQTAVGK--SFSNEG 355
Query: 692 EVSKVVDIINKLRE--NTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQG 749
E + ++ L +T + ++ Y Q + + E +V V T++ QG
Sbjct: 356 EARYALQLVEALTRYASTANKKITAAILNFYGAQYSYVYSMAED----EVTVNTIDGCQG 411
Query: 750 QEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHI 803
QE +V IV RS + ++R+ FL N R NVA++R + +I+G H+
Sbjct: 412 QEYDVTIVLLTRS----DPYERSK---FLVNANRINVALSRPKIATVIIGQRHL 458
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 110 (43.8 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 41/162 (25%), Positives = 68/162 (41%)
Query: 324 IYRVEADEVILKFAKEFHTQHRNGSLYNVSFTY-NRINMRRMYQAVQAAENLEPNLLFPS 382
+Y + E+ K +E + N + + + F N + Y N N++
Sbjct: 792 VYNDKTIEITDKLKEEQENNNNNNNNFKIKFNNENNSILVDTYNNNNDNNNNNNNIIIKK 851
Query: 383 QSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQV 442
++ + IK + F S E S G K +I GPPGTGKT V+ I +
Sbjct: 852 ENLEE--IKRNK-IEFTSKQIEAISS-----GMKRDNLTLIVGPPGTGKTDIAVQIISNI 903
Query: 443 YSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRL 484
Y + + R L+ SN A + + E++ + I E +LRL
Sbjct: 904 YHSSPNERTLIITHSNQALNQLFEKIYRLD---INERYLLRL 942
Score = 89 (36.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 58/239 (24%), Positives = 101/239 (42%)
Query: 573 VVLAGDPKQLGPVIYSKDAETFG-LGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAI 631
V+L GD QL P++ ++ + +S RL E ++T L R R P+I
Sbjct: 1198 VILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEI------PHIT-LDRQGRSRPSI 1250
Query: 632 LDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFFGIQ---GCDEREGNNPSWF 688
+L S + G + L + A + D+ ++ G E E +
Sbjct: 1251 SELFSWKYKGLQDLPLVKEQLQFKLANPGLA--YDYQLINVDESDGYGVGESEPTPYFYQ 1308
Query: 689 NRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPD---------- 738
N E +V + L +E I V+T Y Q ++ V + P
Sbjct: 1309 NLGEAEYIVAMFQYLIAIGYPSEK-ITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLP 1367
Query: 739 VKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
+K+ T++++QGQ+ ++I++S VR+ + Y G + + RR VA++RAR L I
Sbjct: 1368 LKITTIDKYQGQQNDIILLSLVRT--------KQY--GHIRDVRRLIVAMSRARLGLYI 1416
Score = 56 (24.8 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 517 LGRYRIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPI 563
L + +I+ T ++L ++ G F ++ ++E+ Q S+ ES IP+
Sbjct: 1115 LKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIESFIPL 1162
Score = 37 (18.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 474 AGIKENEILRL 484
A +K NE+LRL
Sbjct: 1128 AALKRNELLRL 1138
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/117 (35%), Positives = 66/117 (56%)
Query: 697 VDIINKLRENTELNETDIGVITPYRQQVLKIKKVLETWDMPDVKVGTVEQFQGQEREVII 756
V + + L + + ++ I ++TPY QV +IK LE ++ +V V TV + QG E +I
Sbjct: 58 VRVADLLIKQSGVSPEHIAILTPYNAQVSEIKMTLEKKNVRNVTVCTVMKSQGSEWPYVI 117
Query: 757 VSTVRST---------VKHNEFDRTYCLGFLSNPRRFNVAITRARSLLIIVGNPHIV 804
VSTVRS V+ ++ LGF+++ + NVAITRA+ L I+GN ++
Sbjct: 118 VSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLL 174
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 136 (52.9 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 68/256 (26%), Positives = 117/256 (45%)
Query: 553 QASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSKD-AETFGLGKSYLERLFECEFYR 611
+A+E IA L ++L GD +QL P D A+ F L S ERL +
Sbjct: 1007 EAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNI-- 1064
Query: 612 NGDEGYVTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLF 671
+V +L +R P I L + Y +L ++ + L K+ + LF
Sbjct: 1065 ----PFV-RLNYQHRMCPEIARLLTPHIYQ-DL---ENHPSVLKYEKIKGVSSN----LF 1111
Query: 672 FGIQGCDERE-GNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKV 730
F E+E S N+ E VV++ K E + I ++T Y Q+ ++K+
Sbjct: 1112 FVEHNFPEQEIQEGKSHQNQHEAHFVVELC-KYFLCQEYLPSQITILTTYTGQLFCLRKL 1170
Query: 731 LETWDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAITR 790
+ V+V V+++QG+E ++I++S VRS N+ + +GFL R VA++R
Sbjct: 1171 MPAKTFAGVRVHVVDKYQGEENDIILLSLVRS----NQEGK---VGFLQISNRICVALSR 1223
Query: 791 ARSLLIIVGNPHIVCQ 806
A+ + +GN ++ +
Sbjct: 1224 AKKGMYCIGNMQMLAK 1239
Score = 78 (32.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 377 NLLFPSQSTKRRSIKAAPFVPFNSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKT---M 433
N+L P Q + ++K L++ Q +++ L + A +I GPPGTGKT +
Sbjct: 583 NVLDPGQWPSKEALK---------LDDSQMEALQFALTRELA---IIQGPPGTGKTYVGL 630
Query: 434 TLVEAILQVYSTREHSR----ILVCAASNSAADHMLERLISNE------VAGIKENEILR 483
+V+A+L S + S ILV +N A D LE + + + V G +EIL+
Sbjct: 631 KIVQALLTNESVWQISLQKFPILVVCYTNHALDQFLEGIYNCQKTSIVRVGGRSNSEILK 690
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 319 AKKGSIYRVEADEVILKFAK 338
+ G +Y+V+ D LKF +
Sbjct: 422 SSSGIVYKVQFDTKPLKFVR 441
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 111 (44.1 bits), Expect = 6.9e-06, Sum P(5) = 6.9e-06
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 399 NSLNEEQTRSVEIILGCKGAPPYVIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASN 458
NS+ T+ I G + V+ GPPGTGKT V+ I +Y + R L+ SN
Sbjct: 811 NSIRFTPTQVEAIRAGMQPGLTLVV-GPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSN 869
Query: 459 SAADHMLERLISNEVAGIKENEILRLNATSRPYEDVPTDFIRF 501
A + + E++++ + I E +LRL E D+ R+
Sbjct: 870 QALNQLFEKIMALD---IDERHLLRLGHGEEALE-TEKDYSRY 908
Score = 90 (36.7 bits), Expect = 6.9e-06, Sum P(5) = 6.9e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 675 QGCDEREGNNPSWFNRFEVSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET- 733
+G E E N + N E +V + +R I ++T Y Q I+ V+
Sbjct: 1202 KGVGESEPNPYFYQNLAEAEYIVAVYMYMRL-LGYPAAKISILTTYNGQKHLIRDVINAR 1260
Query: 734 -WDMPDV----KVGTVEQFQGQEREVIIVSTVRSTVKHNEFDRTYCLGFLSNPRRFNVAI 788
+ P + K+ TV+++QGQ+ + I++S VR T +G L + RR VA+
Sbjct: 1261 CGNNPLIGWPHKITTVDKYQGQQNDYILISLVR----------TKAVGHLRDVRRLVVAM 1310
Query: 789 TRARSLLIIVG 799
+RAR L + G
Sbjct: 1311 SRARLGLYVFG 1321
Score = 54 (24.1 bits), Expect = 6.9e-06, Sum P(5) = 6.9e-06
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIA-----NLCTKQTVVV 574
+II T ++L + G + +I ++E+ Q E E+ IP+ + + +
Sbjct: 1049 KIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWI 1108
Query: 575 LAGDPKQLGPVIYSKDAETFG-LGKSYLERL 604
+ GD QL PVI + + + + +S RL
Sbjct: 1109 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRL 1139
Score = 37 (18.1 bits), Expect = 6.9e-06, Sum P(5) = 6.9e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 293 PGLAERRPSLVHGD 306
P L E++PS V D
Sbjct: 540 PHLGEKKPSRVRAD 553
Score = 37 (18.1 bits), Expect = 6.9e-06, Sum P(5) = 6.9e-06
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 601 LERLFECEFYRNGDEGYV 618
L+ +FE + Y+ + G+V
Sbjct: 1173 LQHIFERDEYKQANPGFV 1190
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 100/398 (25%), Positives = 169/398 (42%)
Query: 431 KTMTLVEAILQVYSTREHSR---ILVCA--ASNSAADHMLERLISNEVAGIKENEILRLN 485
K T E + YS EH R L+ + + ERL E +IL
Sbjct: 221 KKWTPGEIVRYGYSQHEHIRNHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYK 280
Query: 486 ATS---RPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGN 542
ATS + +++ +D + + + K +E + ++I +T +S +++ +R
Sbjct: 281 ATSADKKRMQEIESDLRK----QRAKIKEVEKEYIENAKVIGAT-LSKCAIDSLIYER-T 334
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSK-DAETFGLGKSYL 601
F + +DE A P+ I +A K+ +V+ GD QL P+ + + LG+
Sbjct: 335 FDLVVVDEVSMAFVPQ--IALAASLGKR--IVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 602 ERLFECEFYRNGDEGY--VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV 659
E N E + + L R H I + Y + + A++
Sbjct: 391 YHAGIVESV-NKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQL 449
Query: 660 DIFPNKDFPVLFFGIQ-GCDE-REGNNPSWFNRFE--VSKVVDIINKLRENTELNETDIG 715
F N + VLF Q G ++ + S FN V+ + +I L + + IG
Sbjct: 450 QPFAN-EASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLL-DGVQ----SIG 503
Query: 716 VITPYRQQ--VLK--IKKVLETWDMPDVKV--GTVEQFQGQEREVIIVSTVRSTVKHNEF 769
++TPYR Q L I+++L+ ++ V TV +FQG ER+++I TV S +
Sbjct: 504 IVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQ---- 559
Query: 770 DRTYCLGF-LSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
+R L F N R NVA+TRAR I + + H +C+
Sbjct: 560 ERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCK 597
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 100/398 (25%), Positives = 169/398 (42%)
Query: 431 KTMTLVEAILQVYSTREHSR---ILVCA--ASNSAADHMLERLISNEVAGIKENEILRLN 485
K T E + YS EH R L+ + + ERL E +IL
Sbjct: 221 KKWTPGEIVRYGYSQHEHIRNHETLLASKLVETTNGSWGEERLYLEETRQELREKILSYK 280
Query: 486 ATS---RPYEDVPTDFIRFCFFEESIFKCPPREALGRYRIIISTYMSSSLLNTNGIKRGN 542
ATS + +++ +D + + + K +E + ++I +T +S +++ +R
Sbjct: 281 ATSADKKRMQEIESDLRK----QRAKIKEVEKEYIENAKVIGAT-LSKCAIDSLIYER-T 334
Query: 543 FSHIFLDEAGQASEPESMIPIANLCTKQTVVVLAGDPKQLGPVIYSK-DAETFGLGKSYL 601
F + +DE A P+ I +A K+ +V+ GD QL P+ + + LG+
Sbjct: 335 FDLVVVDEVSMAFVPQ--IALAASLGKR--IVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 602 ERLFECEFYRNGDEGY--VTKLVRNYRCHPAILDLPSKLFYGGELLACKDDATSLSSAKV 659
E N E + + L R H I + Y + + A++
Sbjct: 391 YHAGIVESV-NKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQL 449
Query: 660 DIFPNKDFPVLFFGIQ-GCDE-REGNNPSWFNRFE--VSKVVDIINKLRENTELNETDIG 715
F N + VLF Q G ++ + S FN V+ + +I L + + IG
Sbjct: 450 QPFAN-EASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLL-DGVQ----SIG 503
Query: 716 VITPYRQQ--VLK--IKKVLETWDMPDVKV--GTVEQFQGQEREVIIVSTVRSTVKHNEF 769
++TPYR Q L I+++L+ ++ V TV +FQG ER+++I TV S +
Sbjct: 504 IVTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQ---- 559
Query: 770 DRTYCLGF-LSNPRRFNVAITRARSLLIIVGNPHIVCQ 806
+R L F N R NVA+TRAR I + + H +C+
Sbjct: 560 ERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCK 597
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 107 (42.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 819 MVVGPPGTGKTNVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 875
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 876 LRLGHGEEELE-TEKDFSRY 894
Score = 84 (34.6 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 32/91 (35%), Positives = 46/91 (50%)
Query: 714 IGVITPYRQQVLKIKKVLET-------WDMPDVKVGTVEQFQGQEREVIIVSTVRSTVKH 766
I ++T Y Q I+ V+ + P KV TV++FQGQ+ + II+S VR
Sbjct: 1223 ISILTTYNGQKHLIRDVIHQRCASNSFFGQPS-KVTTVDRFQGQQNDYIILSLVR----- 1276
Query: 767 NEFDRTYCLGFLSNPRRFNVAITRARSLLII 797
T +G L + RR VA++RAR L I
Sbjct: 1277 -----TKAVGHLRDVRRLVVAMSRARLGLYI 1302
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIA-----NLCTKQTVVV 574
+II T ++L + ++ G + +I ++EA Q E E+ IP+ + ++ +
Sbjct: 1032 KIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWI 1091
Query: 575 LAGDPKQLGPVI 586
+ GD QL PVI
Sbjct: 1092 MIGDHHQLPPVI 1103
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 121 SIEDRVLQPLRTLTIWLSCKPKEMGLHKSVVQ 152
SI+ P T + + KPKE K+V++
Sbjct: 641 SIQSGAEDPYETFNVIMRRKPKENNF-KAVLE 671
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 425 GPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEILRL 484
GPPGTGKT V I +Y R + SN A + + E++++ + I E +LRL
Sbjct: 740 GPPGTGKTDVAVPIISNIYRNFPEQRTRIVTRSNHALNQLFEKIMALD---IDERHLLRL 796
Query: 485 NATSRPYEDVPTDFIRF 501
E DF R+
Sbjct: 797 GHGEEELE-TEKDFSRY 812
Score = 95 (38.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 66/266 (24%), Positives = 110/266 (41%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + +K G + +I ++EA Q E E+ IP+ L Q
Sbjct: 950 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRW 1008
Query: 574 VLAGDPKQLGPVIYSKDAETFGLGKSYLERLFECEFYRNGDEGYVTKLVRNYRCHPAILD 633
++ GD QL PVI + + + S +E+ F R G L R ++ +
Sbjct: 1009 IMIGDHHQLPPVIKNMAFQKY----SNMEQSLFTRFVRVGVP--TVDLDAQGRARASLCN 1062
Query: 634 LPSKLFYGGELLACKDDATSLSSAKVDIFPNKDFPVLFF-GIQGCDEREGNNPSWFNRFE 692
L + + L S+A + DF ++ QG E E N + N E
Sbjct: 1063 LYNWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVEDFQGVGESEPNPYFYQNLGE 1120
Query: 693 VSKVVDIINKLRENTELNETDIGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQ 746
VV + + I ++T Y Q I+ ++ P + KV TV++
Sbjct: 1121 AEYVVALFMYMCL-LGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDR 1179
Query: 747 FQGQEREVIIVSTVRS-TVKHNEFDR 771
FQGQ+ + I++S VR+ V H + R
Sbjct: 1180 FQGQQNDYILLSLVRTRAVGHLRYVR 1205
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 106 (42.4 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 422 VIYGPPGTGKTMTLVEAILQVYSTREHSRILVCAASNSAADHMLERLISNEVAGIKENEI 481
++ GPPGTGKT V+ I +Y R L+ SN A + + E++++ + I E +
Sbjct: 829 MVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALD---IDERHL 885
Query: 482 LRLNATSRPYEDVPTDFIRF 501
LRL E DF R+
Sbjct: 886 LRLGHGEEELE-TEKDFSRY 904
Score = 73 (30.8 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 714 IGVITPYRQQVLKIKKVLET--WDMPDV----KVGTVEQFQGQEREVIIVSTVRSTVKHN 767
I ++T Y Q I+ V+ + P + KV TV++FQGQ+ + I++S VR
Sbjct: 1233 ISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVR------ 1286
Query: 768 EFDRTYCLGFLSNP-RRFNVAITRARSLLII 797
T +G L RR VA++RAR L I
Sbjct: 1287 ----TKAVGHLRRDVRRLVVAMSRARLGLYI 1313
Score = 54 (24.1 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 521 RIIISTYMSSSLLNTNGIKRG-NFSHIFLDEAGQASEPESMIPIANLCTKQTVV------ 573
+II T ++L + ++ G + +I ++E+ Q E E+ IP+ L Q
Sbjct: 1042 KIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLL-LQNPQDGFSRLKRW 1100
Query: 574 VLAGDPKQLGPVI 586
++ GD QL PVI
Sbjct: 1101 IMIGDHHQLPPVI 1113
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 127 LQPLRTLTIWLSCKPKEM 144
+Q L +L +W++ +PK +
Sbjct: 174 VQQLISLPMWMALQPKRL 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 806 789 0.00095 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 170
No. of states in DFA: 622 (66 KB)
Total size of DFA: 395 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.84u 0.10s 63.94t Elapsed: 00:00:03
Total cpu time: 63.89u 0.10s 63.99t Elapsed: 00:00:03
Start: Sat May 11 10:00:06 2013 End: Sat May 11 10:00:09 2013
WARNINGS ISSUED: 1