BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038516
(708 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/707 (56%), Positives = 522/707 (73%), Gaps = 6/707 (0%)
Query: 3 PTHENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCG 62
P +E + ++ L + C SIT LKRARQIHALVLT +SPY NN++SMY RCG
Sbjct: 89 PLNE-IASSVVELTRKCVSITVLKRARQIHALVLTAG-AGAATESPYANNNLISMYVRCG 146
Query: 63 SIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLA 122
S+ AR+VFD++P R++VSYNAL +AYSR+ D A F L M FE ++PN TFTSL
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 123 QAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAV 182
Q ++LED LMGS L++Q+IK G S++ VQTS+LGMYS+CGD ESA+RIF + ++DAV
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV 266
Query: 183 AWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARV 242
AWN++I+G+ KNDK+++GL F M+ SGV+PTQF+YS++LN CS++G++ GK+IHAR+
Sbjct: 267 AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 243 IISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAV 302
I+S++ DLPL+NALLDMY C D + AF VF RI NP+LVSWNS+I+G ENG GE+A+
Sbjct: 327 IVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAM 386
Query: 303 DMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNM 362
M+ L RMS +PDEYTF+A ISAT+ +GK LH V K GY+ SVFVGTTLL+M
Sbjct: 387 LMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSM 446
Query: 363 YFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFAL 422
YFKN +AES QKVF ++ E+D+VLWTEMI+GHSR+G+ E A++ F +M RE + D F+L
Sbjct: 447 YFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSL 506
Query: 423 SGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLH 482
S + AC+D+A+L+QGE+ H A +TG MSVCG+LVDMY KNG AE+IFS +
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 483 PDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKIL 542
PDLKCWN++LG YS +GM E+A FE ILE+G PD +T+LSLL+ACSH G +GK L
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 543 WNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKR 602
WNQMKE + G KHYSCMV+L+S+AGL+DEA LI +SP + ELWRTLLS CV R
Sbjct: 627 WNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTR 686
Query: 603 NSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWI 662
N ++ + AAEQ+L+LDPED THILLSNLYA GRW+ VA+MRRK++G K+PGLSWI
Sbjct: 687 NLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Query: 663 EA-KNNVHVFSSGDQSHPK-IDDAQAELHRLRGNMRKLVTDEFGKEV 707
E NN VFSSGDQS+P+ + AQ EL+RL+ NM L F K V
Sbjct: 747 EVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNM--LCKSSFNKLV 791
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 261/511 (51%), Gaps = 17/511 (3%)
Query: 45 AQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSR----DHDHAHL-- 98
A+ PY NN++SMY RC S+ AR+VFD++P+R++V+ L A + H+ +
Sbjct: 19 AEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 99 --TFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYG---SSEDTCVQ 153
+F++I M + + + T ++++L+ +HA V+ G ++E
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKR---ARQIHALVLTAGAGAATESPYAN 135
Query: 154 TSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN-DKMKEGLSLFGAMVGSGV 212
+L+ MY CG E A+++F + ++ V++N++ +N D L M V
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 213 NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFS 272
P +++ L+ C+ + + + G +++++I ++ ++ ++L MYS C D ++A
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 273 VFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALP 332
+F + N D V+WN+MI G ++N E + MF MS + P ++T++ +++ S L
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGL-MFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 333 ASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMII 392
+ + GK +HA +I + + + + LL+MY GD VF I ++V W +I
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 393 GHSRMGDGECAIKLFCKMCREGL-KCDNFALSGALSACADLAILKQGEMIHSQAEKTGHG 451
G S G GE A+ ++ ++ R + D + S A+SA A+ G+++H Q K G+
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 452 VEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI 511
+ V +L+ MY KN + +A+ +F + D+ W ++ G+S G +E A F +
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 512 LEHGLRPDEITFLSLLSACSHSGLVERGKIL 542
R D + S++ ACS ++ +G++
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVF 525
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 196/415 (47%), Gaps = 12/415 (2%)
Query: 145 GSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVA-------WNSIILGNFKNDKM 197
++E +L+ MY C E A+++F + ++ V + + +G+ + ++
Sbjct: 17 AAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQI 76
Query: 198 KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVII--SNTQVDLPL-E 254
+ L F + +N S L C + + IHA V+ + + P
Sbjct: 77 IK-LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135
Query: 255 NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
N L+ MY +C + A VF ++ + ++VS+N++ + Y N + +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQK 374
KP+ TF +++ + L G L++ +IK GY +V V T++L MY GD ES ++
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 375 VFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI 434
+F + +D V W MI+G + E + F M G+ F S L+ C+ L
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 435 LKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGG 494
G++IH++ + ++ + +L+DMY GD+R A +F ++ +P+L WN+++ G
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 495 YSHYGMAEEAFMVFEVILEHGL-RPDEITFLSLLSACSHSGLVERGKILWNQMKE 548
S G E+A +++ +L RPDE TF + +SA + GK+L Q+ +
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK 430
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/693 (33%), Positives = 369/693 (53%), Gaps = 16/693 (2%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
++++ C I SL+ Q+H LVL + Y+ N ++S+Y G++ A +F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGF----SSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQ 131
+ +R V+YN LI S+ + L +M + L P+ T SL A S
Sbjct: 347 SNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
G LHA K G + + ++ +LL +Y+ C D E+A F ++ V WN +++
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
D ++ +F M + P Q++Y +L C R+G+ G+ IH+++I +N Q++
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
+ + L+DMY+K TA+ + R D+VSW +MIAGY + +KA+ F R+M
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF---RQM 582
Query: 312 --SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
++ DE +SA + L A G+ +HA +G+ S + L+ +Y + G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSAC 429
E F D + W ++ G + G+ E A+++F +M REG+ +NF A+ A
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 430 ADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWN 489
++ A +KQG+ +H+ KTG+ E VC +L+ MYAK G + AE F +V + WN
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 490 ALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMK-E 548
A++ YS +G EA F+ ++ +RP+ +T + +LSACSH GLV++G + M E
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 549 HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVI 608
+ L P +HY C+V +L+RAGLL A+ I E P + +WRTLLS CV +N +
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL-VWRTLLSACVVHKNMEIGE 881
Query: 609 QAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNV 668
AA +L L+PED T++LLSNLYA + +WD R+KMK + KEPG SWIE KN++
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSI 941
Query: 669 HVFSSGDQSHPKIDDAQAELHRLRGNMRKLVTD 701
H F GDQ+HP D E+H ++ K ++
Sbjct: 942 HSFYVGDQNHPLAD----EIHEYFQDLTKRASE 970
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 281/553 (50%), Gaps = 10/553 (1%)
Query: 30 QIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAY 89
QIHA +L S + N ++ +Y R G + AR+VFD + + S+ A+I+
Sbjct: 208 QIHARILYQGL----RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 90 SRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSED 149
S++ A RL M + P F+S+ A +E +G LH V+K G S D
Sbjct: 264 SKNECEAE-AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 150 TCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVG 209
T V +L+ +Y + G+ SA+ IF + +DAV +N++I G + ++ + LF M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 210 SGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQT 269
G+ P + + L+ ACS G G+ +HA + +E ALL++Y+KC+D +T
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 270 AFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSL--LKPDEYTFAAIISA 327
A F E ++V WN M+ Y G + + F R+M + + P++YT+ +I+
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 328 TSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLW 387
L G+ +H+ +IKT + + +V + L++MY K G ++ + + A KD+V W
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 388 TEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEK 447
T MI G+++ + A+ F +M G++ D L+ A+SACA L LK+G+ IH+QA
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 448 TGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMV 507
+G ++ +LV +Y++ G + + F Q D WNAL+ G+ G EEA V
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 508 FEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSR 567
F + G+ + TF S + A S + +++GK + + + + + ++S+ ++
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 568 AGLLDEAENLIAE 580
G + +AE E
Sbjct: 740 CGSISDAEKQFLE 752
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 291/578 (50%), Gaps = 20/578 (3%)
Query: 3 PTHENLCRNIATLIQICASIT-SLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRC 61
P H+ L L++ C SL R++H+ +L S +++ Y
Sbjct: 82 PNHQTL----KWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFD----FYLFK 133
Query: 62 GSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSL 121
G + A +VFDE+P+R++ ++N +I + + + F L +M E + PN TF+ +
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV-FGLFVRMVSENVTPNEGTFSGV 192
Query: 122 AQAV---SLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGD 178
+A S+ D + +HA+++ G + T V L+ +YS G + A+R+F +
Sbjct: 193 LEACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 179 KDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVI 238
KD +W ++I G KN+ E + LF M G+ PT +++S +L+AC ++ + G+ +
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 239 HARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNG 298
H V+ D + NAL+ +Y + +A +F+ + D V++N++I G + G G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 299 EKAVDMFVALRRMSL--LKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVG 356
EKA+++F +RM L L+PD T A+++ A SA G+ LHA K G+ S+ +
Sbjct: 371 EKAMELF---KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 357 TTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLK 416
LLN+Y K D E+ F+ +++VLW M++ + + D + ++F +M E +
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 417 CDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESI 476
+ + L C L L+ GE IHSQ KT + VC L+DMYAK G L A I
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 477 FSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLV 536
+ D+ W ++ GY+ Y ++A F +L+ G+R DE+ + +SAC+ +
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 537 ERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEA 574
+ G+ + Q + +V+L SR G ++E+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 259/533 (48%), Gaps = 10/533 (1%)
Query: 67 ARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
R VF + S+ A+ S D + ID +E +RPN T L +
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDESFQE---KRIDSVENRGIRPNHQTLKWLLEGCL 95
Query: 127 LLEDQL-MGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWN 185
L G LH+Q++K G + C+ L Y GD A ++F + ++ WN
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 186 SIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGN--FVCGKVIHARVI 243
+I + + E LF MV V P + ++S +L AC R G+ F + IHAR++
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIL 214
Query: 244 ISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVD 303
+ + N L+D+YS+ A VF + D SW +MI+G +N +A+
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 304 MFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMY 363
+F + + ++ P Y F++++SA + + G+ LH LV+K G+ S +V L+++Y
Sbjct: 275 LFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 364 FKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALS 423
F G+ S + +F ++++D V + +I G S+ G GE A++LF +M +GL+ D+ L+
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 424 GALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP 483
+ AC+ L +G+ +H+ K G + G+L+++YAK D+ A F +
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 484 DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILW 543
++ WN +L Y +F +F + + P++ T+ S+L C G +E G+ +
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 544 NQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLS 596
+Q+ + + S ++ + ++ G LD A +++ ++ + W T+++
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIA 564
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/689 (35%), Positives = 371/689 (53%), Gaps = 10/689 (1%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R +LI C+S SL + R+IH +L +N + N++LSMYG+CGS+RDAR+
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSN----CKYDTILNNHILSMYGKCGSLRDARE 123
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VFD +P+R+LVSY ++I YS++ A RL +M E L P+ F S+ +A +
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAE-AIRLYLKMLQEDLVPDQFAFGSIIKACASSS 182
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
D +G LHAQVIK SS Q +L+ MY A R+F I KD ++W+SII
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 190 GNFKNDKMKEGLSLFGAMVGSGV-NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
G + E LS M+ GV +P ++ + L ACS + G IH I S
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA 302
Query: 249 VDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
+ +L DMY++C +A VF +IE PD SWN +IAG NG ++AV +F +
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
R + PD + +++ A + A + G +H+ +IK G+ + + V +LL MY D
Sbjct: 363 RSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 369 AESPQKVFM-LIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALS 427
+F D V W ++ + ++LF M + D+ + L
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 428 ACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKC 487
C +++ LK G +H + KTG E + L+DMYAK G L A IF + + D+
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 488 WNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMK 547
W+ L+ GY+ G EEA ++F+ + G+ P+ +TF+ +L+ACSH GLVE G L+ M+
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 548 -EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRM 606
EH + P +H SC+V LL+RAG L+EAE I E E + +W+TLLS C + N +
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL-EPDVVVWKTLLSACKTQGNVHL 660
Query: 607 VIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKN 666
+AAE +L++DP + T H+LL +++A++G W+ A +R MK + K PG SWIE ++
Sbjct: 661 AQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIED 720
Query: 667 NVHVFSSGDQSHPKIDDAQAELHRLRGNM 695
+H+F + D HP+ DD LH + M
Sbjct: 721 KIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 272 SVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSAL 331
SV + I+ +L+ N I ++ +A++ F ++ S K T+ ++I A S+
Sbjct: 23 SVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSS 80
Query: 332 PASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMI 391
+ A G+ +H ++ + + +L+MY K G ++VF + E+++V +T +I
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140
Query: 392 IGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHG 451
G+S+ G G AI+L+ KM +E L D FA + ACA + + G+ +H+Q K
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
Query: 452 VEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI 511
+ +L+ MY + + A +F + DL W++++ G+S G EA + +
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 512 LEHGL-RPDEITFLSLLSACS 531
L G+ P+E F S L ACS
Sbjct: 261 LSFGVFHPNEYIFGSSLKACS 281
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 362/634 (57%), Gaps = 8/634 (1%)
Query: 49 YMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEF 108
+ N +L+ Y + G +DA +FDE+P+R+ VS+ L Y+ D L RL E
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC-QDPIGLYSRL--HREG 141
Query: 109 ECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFES 168
L P+ FTS + L+ + LH+ ++K G + V +L+ YS CG +S
Sbjct: 142 HELNPH--VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 169 AKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSR 228
A+ +F I KD V W I+ +N ++ L L M +G P +++ L A
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 229 MGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSM 288
+G F K +H +++ + +D + LL +Y++ D AF VF + D+V W+ M
Sbjct: 260 LGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFM 319
Query: 289 IAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTG 348
IA + +NG +AVD+F+ +R + + P+E+T ++I++ + S G+ LH LV+K G
Sbjct: 320 IARFCQNGFCNEAVDLFIRMRE-AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 349 YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFC 408
+D ++V L+++Y K ++ K+F ++ K+ V W +I+G+ +G+G A +F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 409 KMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNG 468
+ R + S AL ACA LA + G +H A KT + +++V SL+DMYAK G
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 469 DLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
D++ A+S+F+++ D+ WNAL+ GYS +G+ +A + +++ + +P+ +TFL +LS
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 529 ACSHSGLVERGKILWNQM-KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIR 587
CS++GL+++G+ + M ++H + P +HY+CMV LL R+G LD+A LI PY E
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY-EPS 617
Query: 588 IELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRK 647
+ +WR +LS + + N ++AE++L+++P+D T++L+SN+YA +W VA +R+
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKS 677
Query: 648 MKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKI 681
MK + KEPGLSWIE + +VH FS G HP +
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDM 711
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 7/315 (2%)
Query: 218 SYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRI 277
+Y +L C + + + K IH ++ + +DL N LL+ Y K + A ++F +
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 278 ENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMS-LLKPDEYTFAAIISATSALPASAY 336
+ VS+ ++ GY + + ++ L R L P + F + + +L +
Sbjct: 111 PERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNP--HVFTSFLKLFVSLDKAEI 164
Query: 337 GKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSR 396
LH+ ++K GYDS+ FVG L+N Y G +S + VF I KDIV+W ++ +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 397 MGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSV 456
G E ++KL M G +N+ AL A L + +H Q KT + ++ V
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 457 CGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGL 516
L+ +Y + GD+ A +F+++ D+ W+ ++ + G EA +F + E +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 517 RPDEITFLSLLSACS 531
P+E T S+L+ C+
Sbjct: 345 VPNEFTLSSILNGCA 359
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+++++ CA Q+H LV+ Y+ N ++ +Y +C + A ++F
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGF----DLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQ 131
E+ ++ VS+N +I Y + F + + + +TF+S A + L
Sbjct: 407 AELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
+G +H IK +++ V SL+ MY+ CGD + A+ +F + D +WN++I G
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+ ++ L + M P ++ +L+ CS G G+ +I + ++
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES-MIRDHGIEP 584
Query: 252 PLEN--ALLDMYSKCSDTQTAFSVFTRIE-NPDLVSWNSMIAGYMENGNGEKA 301
LE+ ++ + + A + I P ++ W +M++ M N E A
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 389/696 (55%), Gaps = 20/696 (2%)
Query: 9 CRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDAR 68
C ++++++ A++ RQ+H + + + +++ Y + + +D R
Sbjct: 93 CSIFSSVLKVSATLCDELFGRQLHCQCIKFGFL----DDVSVGTSLVDTYMKGSNFKDGR 148
Query: 69 QVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
+VFDE+ +R++V++ LI+ Y+R+ + + L +M+ E +PN TF A A+ +L
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEV-LTLFMRMQNEGTQPNSFTF---AAALGVL 204
Query: 129 EDQLMGSL---LHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWN 185
++ +G +H V+K G + V SL+ +Y CG+ A+ +F K V WN
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 186 SIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIIS 245
S+I G N E L +F +M + V ++ S++ ++ C+ + + +H V+
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 246 NTQVDLPLENALLDMYSKCSDTQTAFSVFTRIE-NPDLVSWNSMIAGYMENGNGEKAVDM 304
D + AL+ YSKC+ A +F I ++VSW +MI+G+++N E+AVD+
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 305 FVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYF 364
F ++R + +P+E+T++ I++A + S +HA V+KT Y+ S VGT LL+ Y
Sbjct: 385 FSEMKRKGV-RPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYV 439
Query: 365 KNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
K G E KVF I +KDIV W+ M+ G+++ G+ E AIK+F ++ + G+K + F S
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 425 ALSACADL-AILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP 483
L+ CA A + QG+ H A K+ + V +L+ MYAK G++ +AE +F +
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 484 DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILW 543
DL WN+++ GY+ +G A +A VF+ + + ++ D +TF+ + +AC+H+GLVE G+ +
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 544 NQM-KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKR 602
+ M ++ + P +H SCMV L SRAG L++A +I P + +WRT+L+ C +
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP-NPAGSTIWRTILAACRVHK 678
Query: 603 NSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWI 662
+ + AAE+++ + PED ++LLSN+YA +G W AK+R+ M + KEPG SWI
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Query: 663 EAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKL 698
E KN + F +GD+SHP D +L L ++ L
Sbjct: 739 EVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 251/481 (52%), Gaps = 17/481 (3%)
Query: 58 YGRCGSIR--DARQVFDEIPKRSLVSYNALIAAYSRD--HDHAHLTFRLIDQ--MEFECL 111
+G S R +A +FD+ P R SY +L+ +SRD A F I + ME +C
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 112 RPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKR 171
F+S+ + + L D+L G LH Q IK+G +D V TSL+ Y +F+ ++
Sbjct: 95 -----IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 172 IFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGN 231
+F + +++ V W ++I G +N E L+LF M G P F+++ L + G
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 232 FVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAG 291
G +H V+ + +P+ N+L+++Y KC + + A +F + E +V+WNSMI+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 292 YMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDS 351
Y NG +A+ MF ++ R++ ++ E +FA++I + L + + LH V+K G+
Sbjct: 270 YAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 352 SVFVGTTLLNMYFKNGDAESPQKVFMLIA-EKDIVLWTEMIIGHSRMGDGECAIKLFCKM 410
+ T L+ Y K ++F I ++V WT MI G + E A+ LF +M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 411 CREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDL 470
R+G++ + F S L+A L ++ E +H+Q KT + +V +L+D Y K G +
Sbjct: 389 KRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 471 RAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSAC 530
A +FS + D+ W+A+L GY+ G E A +F + + G++P+E TF S+L+ C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 531 S 531
+
Sbjct: 505 A 505
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/721 (31%), Positives = 387/721 (53%), Gaps = 32/721 (4%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTN-HIPINAQSPYMYNNVLSMYGRCGSIRDAR 68
R A ++++C+ + QIH +V+ + A S +L MY + ++
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA-----LLDMYAKGKRFVESL 235
Query: 69 QVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
+VF IP+++ VS++A+IA ++ + L + +M+ + + S+ ++ + L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQN-NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 129 EDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
+ +G LHA +K + D V+T+ L MY+ C + + A+ +F + + ++N++I
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 189 LGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
G + + + L LF ++ SG+ + S S + AC+ + G I+ I S+
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 249 VDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
+D+ + NA +DMY KC AF VF + D VSWN++IA + +NG G + + +FV++
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
R S ++PDE+TF +I+ A + + YG +H+ ++K+G S+ VG +L++MY K G
Sbjct: 475 LR-SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 369 AESPQKVFMLIAEKD--------------------IVLWTEMIIGHSRMGDGECAIKLFC 408
E +K+ ++ V W +I G+ E A LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 409 KMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNG 468
+M G+ D F + L CA+LA G+ IH+Q K ++ +C +LVDMY+K G
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 469 DLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
DL + +F + L D WNA++ GY+H+G EEA +FE ++ ++P+ +TF+S+L
Sbjct: 653 DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 529 ACSHSGLVERGKILWNQMK-EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIR 587
AC+H GL+++G + MK ++ L P HYS MV +L ++G + A LI E P+
Sbjct: 713 ACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADD 772
Query: 588 IELWRTLLSTCVAKRNSRMVI-QAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRR 646
+ +WRTLL C RN+ V +A +LRLDP+D + + LLSN+YA G W+ V+ +RR
Sbjct: 773 V-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRR 831
Query: 647 KMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKLVTDEFGKE 706
M+G L KEPG SW+E K+ +HVF GD++HP+ ++ EL + M+ F +
Sbjct: 832 NMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRG 891
Query: 707 V 707
V
Sbjct: 892 V 892
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/621 (27%), Positives = 283/621 (45%), Gaps = 56/621 (9%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
N + + + CA +L+ +Q HA ++ + P + ++ N +L +Y A V
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRP----TTFVLNCLLQVYTNSRDFVSASMV 105
Query: 71 FDEIPKRSLVSYNALIAAYSRDHD--HAHLTFRLID------------------------ 104
FD++P R +VS+N +I YS+ +D A+ F ++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 105 ----QMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMY 160
M E + +G TF + + S LED +G +H V++ G D ++LL MY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 161 SNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYS 220
+ F + R+F I +K++V+W++II G +N+ + L F M +Q Y+
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 221 MLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENP 280
+L +C+ + G +HA + S+ D + A LDMY+KC + Q A +F EN
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 281 DLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPL 340
+ S+N+MI GY + +G KA+ +F L S L DE + + + A + + + G +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 341 HALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDG 400
+ L IK+ V V ++MY K +VF + +D V W +I H + G G
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 401 ECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSL 460
+ LF M R ++ D F L AC L G IHS K+G SV SL
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 461 VDMYAKNGDLRAAESIFSQV--------------------LHPDLKCWNALLGGYSHYGM 500
+DMY+K G + AE I S+ L WN+++ GY
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 501 AEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSC 560
+E+A M+F ++E G+ PD+ T+ ++L C++ GK + Q+ + L S
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 561 MVSLLSRAGLLDEAENLIAES 581
+V + S+ G L ++ + +S
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKS 664
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 245/541 (45%), Gaps = 53/541 (9%)
Query: 77 RSLVSYNALIA---AYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLM 133
RS+VS+N + +Y R ++ T ++Q+ F A+ +L +
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFT-DFLNQVNSVSTTNFSFVFKECAKQGALE----L 66
Query: 134 GSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFK 193
G HA +I G T V LL +Y+N DF SA +F + +D V+WN +I G K
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 194 NDKMKEGLSLFGAM----------------------------VGSGVNPTQF---SYSML 222
++ M + S F M V G +F +++++
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 223 LNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDL 282
L CS + + G IH V+ D+ +ALLDMY+K + VF I +
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 283 VSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHA 342
VSW+++IAG ++N A+ F +++++ + +A+++ + +AL G LHA
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVN-AGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 343 LVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGEC 402
+K+ + + V T L+MY K + + Q +F + + MI G+S+ G
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 403 AIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVD 462
A+ LF ++ GL D +LSG ACA + L +G I+ A K+ +++ V + +D
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 463 MYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEIT 522
MY K L A +F ++ D WNA++ + G E +F +L + PDE T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 523 FLSLLSACSHSGLVERGKILWNQMKEHSLI-----PGHKHYSC-MVSLLSRAGLLDEAEN 576
F S+L AC+ G L M+ HS I + C ++ + S+ G+++EAE
Sbjct: 486 FGSILKACT-------GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 577 L 577
+
Sbjct: 539 I 539
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 362/668 (54%), Gaps = 13/668 (1%)
Query: 24 SLKRARQIHALVLTTNHIPINAQSPYMYNNVL-SMYGRCGSIRDARQVFDEIPKRSLVSY 82
+L R +H ++ T A + + NVL + Y +CG + A +F+ I + +VS+
Sbjct: 29 NLVAGRAVHGQIIRTG-----ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSW 83
Query: 83 NALIAAYSRDH--DHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQ 140
N+LI YS++ ++ +L +M + + PN T + +A S L+ +G HA
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 141 VIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEG 200
V+K S D V TSL+GMY G E ++F + +++ W++++ G +++E
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 201 LSLFGAMVGSGV--NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALL 258
+ +F + + + + ++ +L++ + G+ IH I + + L NAL+
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALV 263
Query: 259 DMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDE 318
MYSKC A +F + + ++W++M+ GY +NG +AV +F + + KP E
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI-KPSE 322
Query: 319 YTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFML 378
YT +++A S + GK LH+ ++K G++ +F T L++MY K G +K F
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 379 IAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQG 438
+ E+D+ LWT +I G+ + D E A+ L+ +M G+ ++ ++ L AC+ LA L+ G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 439 EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHY 498
+ +H K G G+E+ + +L MY+K G L +F + + D+ WNA++ G SH
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 499 GMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEH-SLIPGHKH 557
G +EA +FE +L G+ PD++TF++++SACSH G VERG +N M + L P H
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 558 YSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRL 617
Y+CMV LLSRAG L EA+ I ES + + LWR LLS C + + A E+++ L
Sbjct: 563 YACMVDLLSRAGQLKEAKEFI-ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 618 DPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQS 677
+ +T++ LS +Y A GR V ++ + M+ + + KE G SWIE KN HVF GD
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 678 HPKIDDAQ 685
HP I++ +
Sbjct: 682 HPMIEETK 689
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 195/398 (48%), Gaps = 18/398 (4%)
Query: 212 VNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAF 271
+NP + L S+ N V G+ +H ++I + + N L++ Y+KC A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 272 SVFTRIENPDLVSWNSMIAGYMENG---NGEKAVDMFVALRRMSLLKPDEYTFAAIISAT 328
S+F I D+VSWNS+I GY +NG + + +F +R +L P+ YT A I A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKAE 128
Query: 329 SALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWT 388
S+L +S G+ HALV+K ++V T+L+ MY K G E KVF + E++ W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 389 EMIIGHSRMGDGECAIKLFCKMCR---EGLKCDNFALSGALSACADLAILKQGEMIHSQA 445
M+ G++ G E AIK+F R EG D + + LS+ A + G IH
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 446 EKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAF 505
K G +++ +LV MY+K L A +F + W+A++ GYS G + EA
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 506 MVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHY----SCM 561
+F + G++P E T + +L+ACS +E GK Q+ L G + + + +
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK----QLHSFLLKLGFERHLFATTAL 363
Query: 562 VSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCV 599
V + ++AG L +A E + LW +L+S V
Sbjct: 364 VDMYAKAGCLADARK--GFDCLQERDVALWTSLISGYV 399
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTN---HIPINAQSPYMYNNVLSMYGRCGSIRDA 67
+A++++ C+S+ +L+ +Q+H + +PI + + +MY +CGS+ D
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA-------LSTMYSKCGSLEDG 477
Query: 68 RQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
VF P + +VS+NA+I+ S + L ++M E + P+ +TF ++ A S
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHN-GQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/703 (32%), Positives = 377/703 (53%), Gaps = 25/703 (3%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
RN T+ + C + SL + +V +N + + + N+ L G++R ARQ
Sbjct: 6 RNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVK----FDPNSHLRSLINAGNLRAARQ 61
Query: 70 VFDEIPKRSLVSYNALIAAY--SRDHDHAHLTF---RLIDQMEFECLRPNGLTFTSLAQA 124
VFD++P +VS+ ++I Y + + D A + F R++D + P+ + + +A
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDH----AVSPDTSVLSVVLKA 117
Query: 125 VSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAW 184
+ G LHA +K V +SLL MY G + + R+F + ++AV W
Sbjct: 118 CGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 185 NSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVII 244
+II G + KEGL+ F M S +++++ L AC+ + GK IH VI+
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 245 SNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDM 304
L + N+L MY++C + Q +F + D+VSW S+I Y G KAV+
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 305 FVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYF 364
F+ +R S + P+E TFA++ SA ++L +G+ LH V+ G + S+ V +++ MY
Sbjct: 298 FIKMRN-SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 365 KNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
G+ S +F + +DI+ W+ +I G+ + G GE K F M + G K +FAL+
Sbjct: 357 TCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALAS 416
Query: 425 ALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPD 484
LS ++A+++ G +H+ A G +V SL++MY+K G ++ A IF + D
Sbjct: 417 LLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDD 476
Query: 485 LKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWN 544
+ A++ GY+ +G ++EA +FE L+ G RPD +TF+S+L+AC+HSG ++ G +N
Sbjct: 477 IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFN 536
Query: 545 QMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRN 603
M+E +++ P +HY CMV LL RAG L +AE +I E + + + +W TLL C AK +
Sbjct: 537 MMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV-VWTTLLIACKAKGD 595
Query: 604 SRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIE 663
+AAE++L LDP T + L+N+Y++TG + A +R+ MK + KEPG S I+
Sbjct: 596 IERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIK 655
Query: 664 AKNNVHVFSSGDQSHPKIDD---------AQAELHRLRGNMRK 697
K+ V F SGD+ HP+ +D + AE HR +++
Sbjct: 656 IKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFDCTLKR 698
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/694 (31%), Positives = 384/694 (55%), Gaps = 20/694 (2%)
Query: 11 NIATLIQICASIT-SLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
+ +L++ C + T SL+R + +H +LT + + +++++Y C AR
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGL----RRDVVLCKSLINVYFTCKDHCSARH 60
Query: 70 VFDEIPKRSLVS-YNALIAAYSRD---HDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAV 125
VF+ RS V +N+L++ YS++ HD + RL++ P+ TF ++ +A
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLN---CSICVPDSFTFPNVIKAY 117
Query: 126 SLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWN 185
L + +G ++H V+K G D V +SL+GMY+ FE++ ++F + ++D +WN
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 186 SIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIIS 245
++I +++ + ++ L LFG M SG P S ++ ++ACSR+ GK IH + +
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 246 NTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMF 305
++D + +AL+DMY KC + A VF ++ LV+WNSMI GY+ G+ + V++
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI- 296
Query: 306 VALRRMSL--LKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMY 363
L RM + +P + T +I+ A S +GK +H VI++ ++ ++V +L+++Y
Sbjct: 297 --LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 364 FKNGDAESPQKVFMLIAEKDIV-LWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFAL 422
FK G+A + VF +KD+ W MI + +G+ A++++ +M G+K D
Sbjct: 355 FKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 423 SGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLH 482
+ L AC+ LA L++G+ IH ++ + + +L+DMY+K G+ + A IF+ +
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 483 PDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKIL 542
D+ W ++ Y +G EA F+ + + GL+PD +T L++LSAC H+GL++ G
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 543 WNQMK-EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAK 601
++QM+ ++ + P +HYSCM+ +L RAG L EA +I ++P + EL TL S C
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 602 RNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSW 661
+ + A ++ P+D +T+++L NLYA+ WD ++R KMK L K+PG SW
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 662 IEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNM 695
IE + V F + D+SH + ++ L L G+M
Sbjct: 654 IEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 363 bits (931), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 230/673 (34%), Positives = 363/673 (53%), Gaps = 9/673 (1%)
Query: 26 KRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRS-LVSYNA 84
+ +QIH +L N + ++ ++ ++ MY + G DA +VF EI +S +V +N
Sbjct: 187 EEGKQIHGFMLR-NSLDTDS---FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 85 LIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKY 144
+I + + L + ++ +FT A S E+ G +H V+K
Sbjct: 243 MIVGFG-GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 145 GSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLF 204
G D V TSLL MYS CG A+ +F + DK WN+++ +ND L LF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 205 GAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKC 264
G M V P F+ S +++ CS +G + GK +HA + Q +E+ALL +YSKC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 265 SDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMS-LLKPDEYTFAA 323
A+ VF +E D+V+W S+I+G +NG ++A+ +F ++ LKPD +
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 324 IISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKD 383
+ +A + L A +G +H +IKTG +VFVG++L+++Y K G E KVF ++ ++
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 384 IVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHS 443
+V W MI +SR E +I LF M +G+ D+ +++ L A + A L +G+ +H
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 444 QAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEE 503
+ G + + +L+DMY K G + AE+IF ++ H L WN ++ GY +G
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 504 AFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYSCMV 562
A +F+ + + G PD++TFLSL+SAC+HSG VE GK ++ MK+ + + P +HY+ MV
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 563 SLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDG 622
LL RAGLL+EA + I P E +W LLS N + I +AE++LR++PE G
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPI-EADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG 780
Query: 623 TTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKID 682
+T++ L NLY G + AK+ MK L K+PG SWIE + +VF SG S P
Sbjct: 781 STYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKA 840
Query: 683 DAQAELHRLRGNM 695
+ L+RL+ NM
Sbjct: 841 EIFNVLNRLKSNM 853
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/583 (28%), Positives = 285/583 (48%), Gaps = 26/583 (4%)
Query: 14 TLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD- 72
+L++ C+++T+L + IH V+ P++ ++++MY +CG + A QVFD
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGW----RYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 73 ------EIPKRSLVSYNALIAAY--SRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQA 124
+ R + +N++I Y R FR +M +RP+ + S+ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR---RMLVFGVRPDAFSL-SIVVS 176
Query: 125 VSLLEDQLM---GSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDK-D 180
V E G +H +++ D+ ++T+L+ MY G A R+F I DK +
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN 236
Query: 181 AVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHA 240
V WN +I+G + + L L+ + V S++ L ACS+ N G+ IH
Sbjct: 237 VVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 241 RVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEK 300
V+ D + +LL MYSKC A +VF+ + + L WN+M+A Y EN G
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 301 AVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLL 360
A+D+F +R+ S+L PD +T + +IS S L YGK +HA + K S+ + + LL
Sbjct: 357 ALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 361 NMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMC--REGLKCD 418
+Y K G VF + EKD+V W +I G + G + A+K+F M + LK D
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 419 NFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFS 478
+ ++ +ACA L L+ G +H KTG + + V SL+D+Y+K G A +F+
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535
Query: 479 QVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVER 538
+ ++ WN+++ YS + E + +F ++L G+ PD ++ S+L A S + + +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 539 GKILWNQMKEHSLIPGHKHY-SCMVSLLSRAGLLDEAENLIAE 580
GK L IP H + ++ + + G AEN+ +
Sbjct: 596 GKSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 247/500 (49%), Gaps = 16/500 (3%)
Query: 116 LTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIF-- 173
TF SL +A S L + G +H V+ G D + TSL+ MY CG + A ++F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 174 -----GLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSR 228
+ +D WNS+I G FK + KEG+ F M+ GV P FS S++++ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 229 MGNFVC--GKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENP-DLVSW 285
GNF GK IH ++ ++ D L+ AL+DMY K + A+ VF IE+ ++V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 286 NSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVI 345
N MI G+ +G E ++D+++ + S +K +F + A S S +G+ +H V+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNS-VKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 346 KTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIK 405
K G + +V T+LL+MY K G + VF + +K + +W M+ ++ G A+
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 406 LFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYA 465
LF M ++ + D+F LS +S C+ L + G+ +H++ K ++ +L+ +Y+
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 466 KNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVIL--EHGLRPDEITF 523
K G A +F + D+ W +L+ G G +EA VF + + L+PD
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 524 LSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPY 583
S+ +AC+ + G + M + L+ S ++ L S+ GL + A L +
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA--LKVFTSM 537
Query: 584 SEIRIELWRTLLSTCVAKRN 603
S + W +++S C ++ N
Sbjct: 538 STENMVAWNSMIS-CYSRNN 556
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 152/323 (47%), Gaps = 12/323 (3%)
Query: 284 SWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHAL 343
S NS I ++ G +A+ ++ S +TF +++ A SAL +YGK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 344 VIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVF-------MLIAEKDIVLWTEMIIGHSR 396
V+ G+ F+ T+L+NMY K G + +VF ++ +D+ +W MI G+ +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 397 MGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILK--QGEMIHSQAEKTGHGVEM 454
+ + F +M G++ D F+LS +S + +G+ IH + +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 455 SVCGSLVDMYAKNGDLRAAESIFSQVL-HPDLKCWNALLGGYSHYGMAEEAFMVFEVILE 513
+ +L+DMY K G A +F ++ ++ WN ++ G+ G+ E + ++ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 514 HGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDE 573
+ ++ +F L ACS S G+ + + + L + ++S+ S+ G++ E
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 574 AENLIAESPYSEIRIELWRTLLS 596
AE + S + R+E+W +++
Sbjct: 326 AETVF--SCVVDKRLEIWNAMVA 346
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 219/703 (31%), Positives = 366/703 (52%), Gaps = 29/703 (4%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
L++ A + ++ +QIHA V + S + N ++++Y +CG +VFD I
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGY---GVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 75 PKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL---EDQ 131
+R+ VS+N+LI++ + + M E + P+ T S+ A S L E
Sbjct: 160 SERNQVSWNSLISSLC-SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
+MG +HA ++ G + T L+ MY G S+K + G G +D V WN+++
Sbjct: 219 MMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+N+++ E L MV GV P +F+ S +L ACS + GK +HA + N +D
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL-KNGSLD- 335
Query: 252 PLEN-----ALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFV 306
EN AL+DMY C + VF + + + WN+MIAGY +N + ++A+ +F+
Sbjct: 336 --ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
+ + L + T A ++ A A + + +H V+K G D FV TL++MY +
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKM-----------CREGL 415
G + ++F + ++D+V W MI G+ E A+ L KM R L
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 416 KCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAES 475
K ++ L L +CA L+ L +G+ IH+ A K +++V +LVDMYAK G L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 476 IFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGL 535
+F Q+ ++ WN ++ Y +G +EA + +++ G++P+E+TF+S+ +ACSHSG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 536 VERG-KILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTL 594
V+ G +I + ++ + P HY+C+V LL RAG + EA L+ P + W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 595 LSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLG 654
L N + AA+ +++L+P + ++LL+N+Y++ G WD ++RR MK +
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 655 KEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRK 697
KEPG SWIE + VH F +GD SHP+ + L L MRK
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 248/495 (50%), Gaps = 23/495 (4%)
Query: 111 LRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTC-VQTSLLGMYSNCGDFESA 169
++P+ F +L +AV+ L+D +G +HA V K+G D+ V +L+ +Y CGDF +
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 170 KRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRM 229
++F I +++ V+WNS+I +K + L F M+ V P+ F+ ++ ACS +
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 230 G---NFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWN 286
+ GK +HA + +++ + N L+ MY K ++ + DLV+WN
Sbjct: 213 PMPEGLMMGKQVHA-YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 287 SMIAGYMENGNGEKAVDMFVALRRMSL--LKPDEYTFAAIISATSALPASAYGKPLHALV 344
++++ +N E+ ++ LR M L ++PDE+T ++++ A S L GK LHA
Sbjct: 272 TVLSSLCQN---EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 345 IKTG-YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECA 403
+K G D + FVG+ L++MY S ++VF + ++ I LW MI G+S+ + A
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 404 IKLFCKMCRE-GLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVD 462
+ LF M GL ++ ++G + AC + E IH K G + V +L+D
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 463 MYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI--LEH------ 514
MY++ G + A IF ++ DL WN ++ GY E+A ++ + LE
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 515 ---GLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLL 571
L+P+ IT +++L +C+ + +GK + +++L S +V + ++ G L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 572 DEAENLIAESPYSEI 586
+ + + P +
Sbjct: 569 QMSRKVFDQIPQKNV 583
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 387 WTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAE 446
W +++ R A+ + M G+K DN+A L A ADL ++ G+ IH+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 447 KTGHGVE-MSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAF 505
K G+GV+ ++V +LV++Y K GD A +F ++ + WN+L+ + E A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 506 MVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLL 565
F +L+ + P T +S+++ACS+ + E G ++ Q+ + L G + + +L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 566 SRAGLLDE-AENLIAESPYSEIRIELWRTLLST 597
+ G L + A + + + + W T+LS+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+ T++ CA++++L + ++IHA + N A + + ++ MY +CG ++ +R+VF
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNL----ATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
D+IP+++++++N +I AY H + L+ M + ++PN +TF S+ A S
Sbjct: 576 DQIPQKNVITWNVIIMAYGM-HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 224/689 (32%), Positives = 373/689 (54%), Gaps = 12/689 (1%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
L+++C + + +++++ L++ +++ + N L+M+ R G++ DA VF
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSS----MSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 72 DEIPKRSLVSYNALIAAYSRD--HDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
++ +R+L S+N L+ Y++ D A + + + ++P+ TF + + +
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM--LWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
D G +H V++YG D V +L+ MY CGD +SA+ +F + +D ++WN++I
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
G F+N EGL LF AM G V+P + + +++AC +G+ G+ IHA VI + V
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
D+ + N+L MY + A +F+R+E D+VSW +MI+GY N +KA+D + +
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
+ S +KPDE T AA++SA + L G LH L IK S V V L+NMY K
Sbjct: 391 QDS-VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSAC 429
+ +F I K+++ WT +I G R+ + +F + + L+ + L+ AL+AC
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAG-LRLNNRCFEALIFLRQMKMTLQPNAITLTAALAAC 508
Query: 430 ADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWN 489
A + L G+ IH+ +TG G++ + +L+DMY + G + A S F+ D+ WN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWN 567
Query: 490 ALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEH 549
LL GYS G +F+ +++ +RPDEITF+SLL CS S +V +G + +++M+++
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDY 627
Query: 550 SLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQ 609
+ P KHY+C+V LL RAG L EA I + P + +W LL+ C +
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP-DPAVWGALLNACRIHHKIDLGEL 686
Query: 610 AAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVH 669
+A+ + LD + +ILL NLYA G+W VAK+RR MK + L + G SW+E K VH
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Query: 670 VFSSGDQSHPKIDDAQAELHRLRGNMRKL 698
F S D+ HP+ + L M ++
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 197/393 (50%)
Query: 194 NDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPL 253
N K++E + L +M V + + L+ C G +++ + S + + + L
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 254 ENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSL 313
NA L M+ + + A+ VF ++ +L SWN ++ GY + G ++A+ ++ + +
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 314 LKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQ 373
+KPD YTF ++ +P A GK +H V++ GY+ + V L+ MY K GD +S +
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 374 KVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLA 433
+F + +DI+ W MI G+ G ++LF M + D L+ +SAC L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 434 ILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLG 493
+ G IH+ TG V++SVC SL MY G R AE +FS++ D+ W ++
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 494 GYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIP 553
GY + + ++A + ++ + ++PDEIT ++LSAC+ G ++ G L + LI
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 554 GHKHYSCMVSLLSRAGLLDEAENLIAESPYSEI 586
+ ++++ S+ +D+A ++ P +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/696 (30%), Positives = 368/696 (52%), Gaps = 18/696 (2%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
++L++ C + + +HA ++ + P +YN+++S+Y + G A VF
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEP----DSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 72 DEIP---KRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
+ + KR +VS++A++A Y + ++ +E L PN +T++ +A S
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIRACSNS 179
Query: 129 EDQLMGSLLHAQVIKYGSSE-DTCVQTSLLGMYSNCGD-FESAKRIFGLIGDKDAVAWNS 186
+ +G + ++K G E D CV SL+ M+ + FE+A ++F + + + V W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 187 IILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISN 246
+I + +E + F MV SG +F+ S + +AC+ + N GK +H+ I S
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 247 TQVDLPLENALLDMYSKCS---DTQTAFSVFTRIENPDLVSWNSMIAGYMENGN-GEKAV 302
D+ E +L+DMY+KCS VF R+E+ ++SW ++I GYM+N N +A+
Sbjct: 300 LVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 303 DMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNM 362
++F + ++P+ +TF++ A L GK + K G S+ V ++++M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 363 YFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFAL 422
+ K+ E Q+ F ++EK++V + + G R + E A KL ++ L F
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 423 SGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLH 482
+ LS A++ +++GE IHSQ K G VC +L+ MY+K G + A +F+ + +
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 483 PDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKIL 542
++ W +++ G++ +G A F ++E G++P+E+T++++LSACSH GLV G
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 543 WNQMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAK 601
+N M E H + P +HY+CMV LL RAGLL +A I P+ + + +WRT L C
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF-QADVLVWRTFLGACRVH 656
Query: 602 RNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSW 661
N+ + AA ++L LDP + +I LSN+YA G+W+ +MRRKMK L KE G SW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716
Query: 662 IEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRK 697
IE + +H F GD +HP EL RL +++
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 252/487 (51%), Gaps = 14/487 (2%)
Query: 103 IDQMEFECLRP-NGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYS 161
+D M + +RP + +TF+SL ++ D +G L+HA++I++ D+ + SL+ +YS
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 162 NCGDFESAKRIFGLI---GDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFS 218
GD A+ +F + G +D V+W++++ N + + + +F + G+ P +
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 219 YSMLLNACSRMGNFVCGKVIHARVI-ISNTQVDLPLENALLDMYSKCSDT-QTAFSVFTR 276
Y+ ++ ACS G+V ++ + + D+ + +L+DM+ K ++ + A+ VF +
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 277 IENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAY 336
+ ++V+W MI M+ G +A+ F+ + +S + D++T +++ SA + L +
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKFTLSSVFSACAELENLSL 287
Query: 337 GKPLHALVIKTGYDSSVFVGTTLLNMYFK---NGDAESPQKVFMLIAEKDIVLWTEMIIG 393
GK LH+ I++G V +L++MY K +G + +KVF + + ++ WT +I G
Sbjct: 288 GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 394 HSRMGD-GECAIKLFCKMCREG-LKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHG 451
+ + + AI LF +M +G ++ ++F S A AC +L+ + G+ + QA K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 452 VEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI 511
SV S++ M+ K+ + A+ F + +L +N L G E+AF + I
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 512 LEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLL 571
E L TF SLLS ++ G + +G+ + +Q+ + L + ++S+ S+ G +
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 572 DEAENLI 578
D A +
Sbjct: 526 DTASRVF 532
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 220/426 (51%), Gaps = 17/426 (3%)
Query: 185 NSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQ-FSYSMLLNACSRMGNFVCGKVIHARVI 243
+ +IL + ++ +S M G+ P ++S LL +C R +F GK++HAR+I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 244 ISNTQVDLPLENALLDMYSKCSDTQTAFSVFT---RIENPDLVSWNSMIAGYMENGNGEK 300
+ + D L N+L+ +YSK D+ A VF R D+VSW++M+A Y NG
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 301 AVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTG-YDSSVFVGTTL 359
A+ +FV + L+ P++Y + A+I A S G+ ++KTG ++S V VG +L
Sbjct: 150 AIKVFVEFLELGLV-PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 360 LNMYFKNGDA-ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCD 418
++M+ K ++ E+ KVF ++E ++V WT MI +MG AI+ F M G + D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 419 NFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAK---NGDLRAAES 475
F LS SACA+L L G+ +HS A ++G V+ C SLVDMYAK +G +
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVEC-SLVDMYAKCSADGSVDDCRK 326
Query: 476 IFSQVLHPDLKCWNALLGGY-SHYGMAEEAFMVF-EVILEHGLRPDEITFLSLLSACSHS 533
+F ++ + W AL+ GY + +A EA +F E+I + + P+ TF S AC +
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 534 GLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRT 593
GK + Q + L + ++S+ ++ +++A+ A SE + + T
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR--AFESLSEKNLVSYNT 444
Query: 594 LLS-TC 598
L TC
Sbjct: 445 FLDGTC 450
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 209/690 (30%), Positives = 365/690 (52%), Gaps = 12/690 (1%)
Query: 12 IATLIQICASITSLKR--ARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
+++ IQ C+ + R Q+ + ++ + + Y+ ++ Y + G+I AR
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGF----DRDVYVGTLLIDFYLKDGNIDYARL 204
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VFD +P++S V++ +I+ + ++++ +L Q+ + + P+G +++ A S+L
Sbjct: 205 VFDALPEKSTVTWTTMISGCVK-MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
G +HA +++YG D + L+ Y CG +A ++F + +K+ ++W +++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
G +N KE + LF +M G+ P ++ S +L +C+ + G +HA I +N
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNG---EKAVDMFV 306
D + N+L+DMY+KC A VF D+V +N+MI GY G +A+++F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
+R L++P TF +++ A+++L + K +H L+ K G + +F G+ L+++Y
Sbjct: 444 DMR-FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGAL 426
+ + VF + KD+V+W M G+ + + E A+ LF ++ + D F + +
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 427 SACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLK 486
+A +LA ++ G+ H Q K G + +L+DMYAK G A F D+
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622
Query: 487 CWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQM 546
CWN+++ Y+++G ++A + E ++ G+ P+ ITF+ +LSACSH+GLVE G + M
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 547 KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRM 606
+ P +HY CMVSLL RAG L++A LI + P I +WR+LLS C N +
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI-VWRSLLSGCAKAGNVEL 741
Query: 607 VIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKN 666
AAE + DP+D + +LSN+YA+ G W K+R +MK + KEPG SWI
Sbjct: 742 AEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINK 801
Query: 667 NVHVFSSGDQSHPKIDDAQAELHRLRGNMR 696
VH+F S D+SH K + L L +R
Sbjct: 802 EVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 161/614 (26%), Positives = 302/614 (49%), Gaps = 18/614 (2%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R A L+Q+ AS L +H ++ Y+ N ++++Y R G + AR+
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGL----ELDTYLSNILINLYSRAGGMVYARK 100
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLR---PNGLTFTSLAQAVS 126
VF+++P+R+LVS++ +++A + H L+ +EF R PN +S QA S
Sbjct: 101 VFEKMPERNLVSWSTMVSACNH---HGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 127 LLEDQ--LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAW 184
L+ + M L + ++K G D V T L+ Y G+ + A+ +F + +K V W
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 185 NSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVII 244
++I G K + L LF ++ V P + S +L+ACS + GK IHA ++
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 245 SNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDM 304
++D L N L+D Y KC A +F + N +++SW ++++GY +N ++A+++
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 305 FVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYF 364
F ++ + LKPD Y ++I+++ ++L A +G +HA IK + +V +L++MY
Sbjct: 338 FTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 365 KNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMG---DGECAIKLFCKMCREGLKCDNFA 421
K +KVF + A D+VL+ MI G+SR+G + A+ +F M ++
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 422 LSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVL 481
L A A L L + IH K G +++ +L+D+Y+ L+ + +F ++
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 482 HPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKI 541
DL WN++ GY EEA +F + RPDE TF ++++A + V+ G+
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 542 LWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAK 601
Q+ + L + ++ + ++ G ++A + ++ W +++S+
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC--WNSVISSYANH 634
Query: 602 RNSRMVIQAAEQVL 615
+ +Q E+++
Sbjct: 635 GEGKKALQMLEKMM 648
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/692 (30%), Positives = 371/692 (53%), Gaps = 14/692 (2%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+++T + + +LK + I L T + + ++ ++ ++++ Y G I ++
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE-FVASSLIKAYLEYGKIDVPSKL 195
Query: 71 FDEIPKRSLVSYNALIAAYSR--DHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQ--AVS 126
FD + ++ V +N ++ Y++ D F + M + + PN +TF + A
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV---MRMDQISPNAVTFDCVLSVCASK 252
Query: 127 LLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNS 186
LL D +G LH V+ G + ++ SLL MYS CG F+ A ++F ++ D V WN
Sbjct: 253 LLID--LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 187 IILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISN 246
+I G ++ M+E L+ F M+ SGV P ++S LL + S+ N K IH ++ +
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 247 TQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFV 306
+D+ L +AL+D Y KC A ++F++ + D+V + +MI+GY+ NG +++MF
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
L ++ + P+E T +I+ L A G+ LH +IK G+D+ +G +++MY K
Sbjct: 431 WLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGAL 426
G ++F ++++DIV W MI ++ + AI +F +M G+ D ++S AL
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 427 SACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLK 486
SACA+L G+ IH K ++ +L+DMYAK G+L+AA ++F + ++
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 487 CWNALLGGYSHYGMAEEAFMVF-EVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQ 545
WN+++ ++G +++ +F E++ + G+RPD+ITFL ++S+C H G V+ G +
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 546 MKE-HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNS 604
M E + + P +HY+C+V L RAG L EA + P+ +W TLL C +N
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP-DAGVWGTLLGACRLHKNV 728
Query: 605 RMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEA 664
+ A+ +++ LDP + ++L+SN +A W+ V K+R MK + K PG SWIE
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Query: 665 KNNVHVFSSGDQSHPKIDDAQAELHRLRGNMR 696
H+F SGD +HP+ + L+ L G +R
Sbjct: 789 NKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/598 (24%), Positives = 278/598 (46%), Gaps = 14/598 (2%)
Query: 5 HENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSI 64
E + R ++ L+Q C++ L++ +Q+HA ++ + I+ S Y +L MY CGS
Sbjct: 31 EETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNS---ISGDS-YTDERILGMYAMCGSF 86
Query: 65 RDARQVFDEIPKR--SLVSYNALIAAYSRDHDHAHLTFRLIDQMEFEC--LRPNGLTFTS 120
D ++F + R S+ +N++I+++ R+ L L + C + P+ TF
Sbjct: 87 SDCGKMFYRLDLRRSSIRPWNSIISSFVRN---GLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 121 LAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKD 180
L +A L++ L V G + V +SL+ Y G + ++F + KD
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 181 AVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHA 240
V WN ++ G K + + F M ++P ++ +L+ C+ G +H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 241 RVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEK 300
V++S + ++N+LL MYSKC A +F + D V+WN MI+GY+++G E+
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 301 AVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLL 360
++ F + +L PD TF++++ + S Y K +H +++ +F+ + L+
Sbjct: 324 SLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 361 NMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNF 420
+ YFK Q +F D+V++T MI G+ G ++++F + + + +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 421 ALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQV 480
L L L LK G +H K G ++ +++DMYAK G + A IF ++
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 481 LHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGK 540
D+ WN+++ + A +F + G+ D ++ + LSAC++ GK
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 541 ILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTC 598
+ M +HSL S ++ + ++ G L A N+ E I W ++++ C
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVSWNSIIAAC 618
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 342/632 (54%), Gaps = 12/632 (1%)
Query: 57 MYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGL 116
MY +C + ARQ+FD +P+R+++S+N+LI+ Y++ + ++ E L+ +
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKF 149
Query: 117 TFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLI 176
T+ D +G LLH V+ G S+ + L+ MYS CG + A +F
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 177 GDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACS---RMGNFV 233
++D V+WNS+I G + +E L+L M G+N T ++ +L AC G
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 234 CGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYM 293
G IH + D+ + ALLDMY+K + A +F+ + + ++V++N+MI+G++
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 294 E-----NGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTG 348
+ + +A +F+ ++R L +P TF+ ++ A SA YG+ +HAL+ K
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGL-EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 349 YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFC 408
+ S F+G+ L+ +Y G E + F +++DI WT MI H + E A LF
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 409 KMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNG 468
++ ++ + + +S +SACAD A L GE I A K+G SV S + MYAK+G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 469 DLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
++ A +F +V +PD+ ++A++ + +G A EA +FE + HG++P++ FL +L
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 529 ACSHSGLVERGKILWNQMK-EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIR 587
AC H GLV +G + MK ++ + P KH++C+V LL R G L +AENLI S + +
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 588 IELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRK 647
+ WR LLS+C ++S + + AE+++ L+PE +++LL N+Y +G ++R
Sbjct: 629 VT-WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 648 MKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHP 679
M+ + KEP LSWI N H F+ D SHP
Sbjct: 688 MRDRGVKKEPALSWIVIGNQTHSFAVADLSHP 719
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 237/493 (48%), Gaps = 22/493 (4%)
Query: 13 ATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD 72
A + C L +H LV+ +Q ++ N ++ MY +CG + A +FD
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGL----SQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 73 EIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSL-LEDQ 131
+R VS+N+LI+ Y R A L+ +M + L S+ +A + L +
Sbjct: 208 RCDERDQVSWNSLISGYVR-VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 132 LM--GSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
+ G +H K G D V+T+LL MY+ G + A ++F L+ K+ V +N++I
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS 326
Query: 190 GNFKNDKM-----KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVII 244
G + D++ E LF M G+ P+ ++S++L ACS G+ IHA +
Sbjct: 327 GFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK 386
Query: 245 SNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDM 304
+N Q D + +AL+++Y+ T+ F D+ SW SMI +++N E A D+
Sbjct: 387 NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
Query: 305 FVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYF 364
F L S ++P+EYT + ++SA + A + G+ + IK+G D+ V T+ ++MY
Sbjct: 447 FRQLFS-SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 365 KNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
K+G+ +VF+ + D+ ++ MI ++ G A+ +F M G+K + A G
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 425 ALSACADLAILKQGEMIHSQAEKTGHGVEMS----VCGSLVDMYAKNGDLRAAES-IFSQ 479
L AC ++ QG + + Q K + + + C LVD+ + G L AE+ I S
Sbjct: 566 VLIACCHGGLVTQG-LKYFQCMKNDYRINPNEKHFTC--LVDLLGRTGRLSDAENLILSS 622
Query: 480 VLHPDLKCWNALL 492
W ALL
Sbjct: 623 GFQDHPVTWRALL 635
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 219/461 (47%), Gaps = 17/461 (3%)
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
++G L H +IK + + +LL MY C + A+++F + +++ +++NS+I G
Sbjct: 64 VLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGY 123
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+ ++ + LF + + +F+Y+ L C + G+++H V+++ +
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQV 183
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
L N L+DMYSKC A S+F R + D VSWNS+I+GY+ G E+ +++ + R
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD 243
Query: 312 SLLKPDEYTFAAIISATSALPASAY---GKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
L Y +++ A + G +H K G + + V T LL+MY KNG
Sbjct: 244 G-LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 369 AESPQKVFMLIAEKDIVLWTEMIIGHSRMGD-----GECAIKLFCKMCREGLKCDNFALS 423
+ K+F L+ K++V + MI G +M + A KLF M R GL+ S
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 424 GALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP 483
L AC+ L+ G IH+ K + + +L+++YA G F+
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 484 DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILW 543
D+ W +++ + E AF +F + +RP+E T ++SAC+ + G+
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE--- 479
Query: 544 NQMKEHSLIPGHKHYSCM----VSLLSRAGLLDEAENLIAE 580
Q++ +++ G ++ + +S+ +++G + A + E
Sbjct: 480 -QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 207/421 (49%), Gaps = 13/421 (3%)
Query: 219 YSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIE 278
Y +L ++ G+ V GK+ H +I S+ L L N LL+MY KC + A +F R+
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 279 NPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGK 338
+++S+NS+I+GY + G E+A+++F+ R + LK D++T+A + G+
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLGE 168
Query: 339 PLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMG 398
LH LV+ G VF+ L++MY K G + +F E+D V W +I G+ R+G
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG 228
Query: 399 DGECAIKLFCKMCREGLKCDNFALSGALSACA---DLAILKQGEMIHSQAEKTGHGVEMS 455
E + L KM R+GL +AL L AC + +++G IH K G ++
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 456 VCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYG-----MAEEAFMVFEV 510
V +L+DMYAKNG L+ A +FS + ++ +NA++ G+ + EAF +F
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 511 ILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGL 570
+ GL P TF +L ACS + +E G+ + + +++ S ++ L + G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 571 LDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVL--RLDPEDGTTHILL 628
++ A + S+ I W +++ V Q+ + PE+ T +++
Sbjct: 409 TEDGMQCFAST--SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 629 S 629
S
Sbjct: 467 S 467
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 211/688 (30%), Positives = 358/688 (52%), Gaps = 9/688 (1%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R + +++Q+CA SLK +++ + N I++ + + + MY CG +++A +
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFI-RGNGFVIDSN---LGSKLSLMYTNCGDLKEASR 150
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VFDE+ + +N L+ ++ D + + L +M + + TF+ ++++ S L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSG-SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
G LH ++K G E V SL+ Y +SA+++F + ++D ++WNSII
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
G N ++GLS+F M+ SG+ + + C+ G+ +H+ + +
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
+ N LLDMYSKC D +A +VF + + +VS+ SMIAGY G +AV +F +
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
+ PD YT A+++ + GK +H + + +FV L++MY K G
Sbjct: 390 EEGI-SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREG-LKCDNFALSGALSA 428
+ + VF + KDI+ W +I G+S+ A+ LF + E D ++ L A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 429 CADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCW 488
CA L+ +G IH + G+ + V SLVDMYAK G L A +F + DL W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 489 NALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE 548
++ GY +G +EA +F + + G+ DEI+F+SLL ACSHSGLV+ G +N M+
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 549 HSLI-PGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMV 607
I P +HY+C+V +L+R G L +A I P +W LL C + ++
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLA 687
Query: 608 IQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNN 667
+ AE+V L+PE+ ++L++N+YA +W+ V ++R+++ L K PG SWIE K
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 668 VHVFSSGDQSHPKIDDAQAELHRLRGNM 695
V++F +GD S+P+ ++ +A L ++R M
Sbjct: 748 VNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%), Gaps = 10/325 (3%)
Query: 256 ALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLK 315
A L S C D+ T F + + N+ + + E+GN E AV + + +
Sbjct: 42 ASLRTVSDCVDSITTF-------DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI-- 92
Query: 316 PDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKV 375
D T +++ + + GK + + G+ +G+ L MY GD + +V
Sbjct: 93 -DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 376 FMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAIL 435
F + + + W ++ ++ GD +I LF KM G++ D++ S + + L +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 436 KQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGY 495
GE +H K+G G SV SLV Y KN + +A +F ++ D+ WN+++ GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 496 SHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGH 555
G+AE+ VF +L G+ D T +S+ + C+ S L+ G+ + + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 556 KHYSCMVSLLSRAGLLDEAENLIAE 580
+ + ++ + S+ G LD A+ + E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFRE 356
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 355 bits (912), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 357/666 (53%), Gaps = 17/666 (2%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
+ +L+ A+ S+ + + +H V+T + S ++ + + Y CG I AR+
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRV-----SGHILSTLSVTYALCGHITYARK 70
Query: 70 VFDEIPKRSLVSYNALIAAYSRD---HDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
+F+E+P+ SL+SYN +I Y R+ HD + R++ + +C+ P+G T+ +A+A
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE-GVKCV-PDGYTYPFVAKAAG 128
Query: 127 LLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNS 186
L+ +G ++H ++++ D VQ +LL MY N G E A+ +F ++ ++D ++WN+
Sbjct: 129 ELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNT 188
Query: 187 IILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISN 246
+I G ++N M + L +F MV V+ + +L C + + G+ +H V
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 247 TQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFV 306
+ ++NAL++MY KC A VF R+E D+++W MI GY E+G+ E A+++
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL-C 307
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
L + ++P+ T A+++S GK LH ++ S + + T+L++MY K
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGAL 426
+ +VF ++ W+ +I G + A+ LF +M RE ++ + L+ L
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 427 SACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLH---- 482
A A LA L+Q IH KTG + LV +Y+K G L +A IF+ +
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 483 PDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKIL 542
D+ W AL+ GY +G A VF ++ G+ P+EITF S L+ACSHSGLVE G L
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 543 WNQMKEH-SLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAK 601
+ M EH + HY+C+V LL RAG LDEA NLI P+ E +W LL+ CV
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF-EPTSTVWGALLAACVTH 606
Query: 602 RNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSW 661
N ++ AA ++ L+PE+ ++LL+N+YAA GRW + K+R M+ L K+PG S
Sbjct: 607 ENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHST 666
Query: 662 IEAKNN 667
IE ++N
Sbjct: 667 IEIRSN 672
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 354/656 (53%), Gaps = 8/656 (1%)
Query: 45 AQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLID 104
A + Y+ ++++SMY +C + A +VF+ + +++ V +NA+I Y+ + + +H L
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE-SHKVMELFM 417
Query: 105 QMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCG 164
M+ + TFTSL + D MGS H+ +IK +++ V +L+ MY+ CG
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 165 DFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLN 224
E A++IF + D+D V WN+II +++ E LF M G+ + L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 225 ACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVS 284
AC+ + GK +H + DL ++L+DMYSKC + A VF+ + +VS
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 597
Query: 285 WNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALV 344
N++IAGY +N N E+AV +F + + P E TFA I+ A + G H +
Sbjct: 598 MNALIAGYSQN-NLEEAVVLFQEMLTRGV-NPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 345 IKTGYDSS-VFVGTTLLNMYFKN-GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGEC 402
K G+ S ++G +LL MY + G E+ L + K IVLWT M+ GHS+ G E
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 403 AIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVD 462
A+K + +M +G+ D L C+ L+ L++G IHS H ++ +L+D
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 463 MYAKNGDLRAAESIFSQV-LHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEI 521
MYAK GD++ + +F ++ ++ WN+L+ GY+ G AE+A +F+ + + + PDEI
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Query: 522 TFLSLLSACSHSGLVERGKILWNQM-KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAE 580
TFL +L+ACSH+G V G+ ++ M ++ + H +CMV LL R G L EA++ I E
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI-E 894
Query: 581 SPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDC 640
+ + LW +LL C + +AE+++ L+P++ + ++LLSN+YA+ G W+
Sbjct: 895 AQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEK 954
Query: 641 VAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMR 696
+R+ M+ + K PG SWI+ + H+F++GD+SH +I + L L M+
Sbjct: 955 ANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 259/506 (51%), Gaps = 15/506 (2%)
Query: 51 YNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFEC 110
+ V++ Y R G ++DAR +F E+ +V++N +I+ + + + M
Sbjct: 264 FVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK-RGCETVAIEYFFNMRKSS 322
Query: 111 LRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAK 170
++ T S+ A+ ++ + +G ++HA+ IK G + + V +SL+ MYS C E+A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 171 RIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMG 230
++F + +K+ V WN++I G N + + + LF M SG N F+++ LL+ C+
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 231 NFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIA 290
+ G H+ +I +L + NAL+DMY+KC + A +F R+ + D V+WN++I
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 291 GYMENGNGEKAVDMFVALRRMSL--LKPDEYTFAAIISATSALPASAYGKPLHALVIKTG 348
Y+++ N +A D+F +RM+L + D A+ + A + + GK +H L +K G
Sbjct: 503 SYVQDENESEAFDLF---KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 349 YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFC 408
D + G++L++MY K G + +KVF + E +V +I G+S+ + E A+ LF
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQ 618
Query: 409 KMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCG-SLVDMYAKN 467
+M G+ + + AC L G H Q K G E G SL+ MY +
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 468 GDLRAAESIFSQVLHP-DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSL 526
+ A ++FS++ P + W ++ G+S G EEA ++ + G+ PD+ TF+++
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 527 LSACSHSGLVERGKILWNQMKEHSLI 552
L CS + G+ + HSLI
Sbjct: 739 LRVCSVLSSLREGRAI------HSLI 758
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 250/522 (47%), Gaps = 46/522 (8%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+ ++ CA T+++ RQIH ++ ++ Y ++ MY +C I DAR+V
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGL----ERNSYCGGALVDMYAKCDRISDARRV 217
Query: 71 FDEIPKRSLVSYNALIAAYSRDH--DHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
F+ I + V + L + Y + + A L F ++M E RP+ L F ++
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF---ERMRDEGHRPDHLAFVTV------- 267
Query: 129 EDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
+ Y G + A+ +FG + D VAWN +I
Sbjct: 268 ----------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMI 299
Query: 189 LGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
G+ K + F M S V T+ + +L+A + N G V+HA I
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 249 VDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
++ + ++L+ MYSKC + A VF +E + V WN+MI GY NG K +++F+ +
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
+ S D++TF +++S +A G H+++IK ++FVG L++MY K G
Sbjct: 420 KS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 369 AESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSA 428
E +++F + ++D V W +I + + + A LF +M G+ D L+ L A
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 429 CADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCW 488
C + L QG+ +H + K G ++ SL+DMY+K G ++ A +FS + +
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 489 NALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSAC 530
NAL+ GYS + EEA ++F+ +L G+ P EITF +++ AC
Sbjct: 599 NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 267/595 (44%), Gaps = 57/595 (9%)
Query: 3 PTHENLCRNIATLIQICASITSLKRARQIH-------ALVLTTNH--------IPINAQS 47
P+H+ + + L++IC L ++R++ AL L + I+++
Sbjct: 39 PSHDQIHQR---LLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEG 95
Query: 48 PYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQME 107
+ N ++ +Y +C + A + FD + K + ++N++++ YS + + E
Sbjct: 96 R-LGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 108 FECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFE 167
+ PN TF+ + + + G +H +IK G ++ +L+ MY+ C
Sbjct: 154 NQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 168 SAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACS 227
A+R+F I D + V W + G K +E + +F M G P ++ ++N
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272
Query: 228 RMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNS 287
R+G K+ AR++ F + +PD+V+WN
Sbjct: 273 RLG-----KLKDARLL------------------------------FGEMSSPDVVAWNV 297
Query: 288 MIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKT 347
MI+G+ + G A++ F +R+ S+ K T +++SA + G +HA IK
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSV-KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 348 GYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLF 407
G S+++VG++L++MY K E+ KVF + EK+ V W MI G++ G+ ++LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 408 CKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKN 467
M G D+F + LS CA L+ G HS K + V +LVDMYAK
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 468 GDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLL 527
G L A IF ++ D WN ++G Y EAF +F+ + G+ D S L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 528 SACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESP 582
AC+H + +GK + + L S ++ + S+ G++ +A + + P
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 233/512 (45%), Gaps = 44/512 (8%)
Query: 93 HDHAHLTFRLIDQMEFEC-LRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTC 151
HD H RL++ +C L + F + Q ++L +G +H++ + G +
Sbjct: 41 HDQIHQ--RLLEICLGQCKLFKSRKVFDEMPQRLALA--LRIGKAVHSKSLILGIDSEGR 96
Query: 152 VQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSG 211
+ +++ +Y+ C A++ F + +KD AWNS++ K + L F ++ +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 212 VNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAF 271
+ P +F++S++L+ C+R N G+ IH +I + + AL+DMY+KC A
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 272 SVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSAL 331
VF I +P+ V W + +GY++ G E+AV +F +R +PD F
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAF---------- 264
Query: 332 PASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMI 391
T++N Y + G + + +F ++ D+V W MI
Sbjct: 265 -------------------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMI 299
Query: 392 IGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHG 451
GH + G AI+ F M + +K L LSA +A L G ++H++A K G
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 452 VEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI 511
+ V SLV MY+K + AA +F + + WNA++ GY+H G + + +F +
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 512 LEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLL 571
G D+ TF SLLS C+ S +E G + + + L + +V + ++ G L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 572 DEAENLIAESPYSEIRIELWRTLLSTCVAKRN 603
++A I E + W T++ + V N
Sbjct: 480 EDARQ-IFERMCDRDNVT-WNTIIGSYVQDEN 509
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
T++++C+ ++SL+ R IH+L+ H S N ++ MY +CG ++ + QV
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS----NTLIDMYAKCGDMKGSSQV 789
Query: 71 FDEIPKRS-LVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
FDE+ +RS +VS+N+LI Y+++ +A ++ D M + P+ +TF + A S
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKN-GYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 330/581 (56%), Gaps = 7/581 (1%)
Query: 128 LEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSI 187
L DQ G +H ++K GS + L+ MY C + A ++F + +++ V+W+++
Sbjct: 21 LSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSAL 78
Query: 188 ILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNT 247
+ G+ N +K LSLF M G+ P +F++S L AC + G IH +
Sbjct: 79 MSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF 138
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
++ + + N+L+DMYSKC A VF RI + L+SWN+MIAG++ G G KA+D F
Sbjct: 139 EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGM 198
Query: 308 LRRMSLL-KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYD--SSVFVGTTLLNMYF 364
++ ++ +PDE+T +++ A S+ GK +H ++++G+ SS + +L+++Y
Sbjct: 199 MQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 365 KNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
K G S +K F I EK ++ W+ +I+G+++ G+ A+ LF ++ + D+FALS
Sbjct: 259 KCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSS 318
Query: 425 ALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPD 484
+ AD A+L+QG+ + + A K G+E SV S+VDMY K G + AE F+++ D
Sbjct: 319 IIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 485 LKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWN 544
+ W ++ GY +G+ +++ +F +L H + PDE+ +L++LSACSHSG+++ G+ L++
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 545 QMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRN 603
++ E H + P +HY+C+V LL RAG L EA++LI P + +W+TLLS C +
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP-NVGIWQTLLSLCRVHGD 497
Query: 604 SRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIE 663
+ + + +LR+D ++ ++++SNLY G W+ R L KE G+SW+E
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 664 AKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKLVTDEFG 704
+ VH F SG+ SHP Q L +R+ + +G
Sbjct: 558 IEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYG 598
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 255/495 (51%), Gaps = 18/495 (3%)
Query: 7 NLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRD 66
N +N+ +++++C + Q+H +L + + + N ++ MY +C
Sbjct: 4 NQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSG----SGLNLITSNYLIDMYCKCREPLM 59
Query: 67 ARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
A +VFD +P+R++VS++AL++ + + D + L +M + + PN TF++ +A
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKG-SLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 127 LLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNS 186
LL G +H +K G V SL+ MYS CG A+++F I D+ ++WN+
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 187 IILGNFKNDKMKEGLSLFGAMVGSGVN--PTQFSYSMLLNACSRMGNFVCGKVIHARVII 244
+I G + L FG M + + P +F+ + LL ACS G GK IH ++
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 245 SNTQV--DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAV 302
S + +L+D+Y KC +A F +I+ ++SW+S+I GY + G +A+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 303 DMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIK--TGYDSSVFVGTTLL 360
+F L+ ++ + D + ++II + GK + AL +K +G ++SV +++
Sbjct: 299 GLFKRLQELN-SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVV 355
Query: 361 NMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNF 420
+MY K G + +K F + KD++ WT +I G+ + G G+ ++++F +M R ++ D
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 421 ALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSV--CGSLVDMYAKNGDLRAAESIFS 478
LSAC+ ++K+GE + S+ +T HG++ V +VD+ + G L+ A+ +
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLET-HGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 479 QV-LHPDLKCWNALL 492
+ + P++ W LL
Sbjct: 475 TMPIKPNVGIWQTLL 489
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 191/373 (51%), Gaps = 13/373 (3%)
Query: 222 LLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPD 281
+L C+R G G +H ++ S + ++L N L+DMY KC + A+ VF + +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 282 LVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLH 341
+VSW+++++G++ NG+ + ++ +F + R + P+E+TF+ + A L A G +H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 342 ALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGE 401
+K G++ V VG +L++MY K G +KVF I ++ ++ W MI G G G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 402 CAIKLFCKMCREGLK--CDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMS--VC 457
A+ F M +K D F L+ L AC+ ++ G+ IH ++G S +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 458 GSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLR 517
GSLVD+Y K G L +A F Q+ + W++L+ GY+ G EA +F+ + E +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 518 PDEITFLSLLSACSHSGLVERGKILWNQMKEHSL-IPGHKHYSCMVSLLS---RAGLLDE 573
D S++ + L+ +GK QM+ ++ +P S + S++ + GL+DE
Sbjct: 311 IDSFALSSIIGVFADFALLRQGK----QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 574 AENLIAESPYSEI 586
AE AE ++
Sbjct: 367 AEKCFAEMQLKDV 379
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 422 LSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVL 481
L L C + QG +H K+G G+ + L+DMY K + A +F +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 482 HPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERG-- 539
++ W+AL+ G+ G + + +F + G+ P+E TF + L AC +E+G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 540 ------KILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLI 578
KI + M E + +V + S+ G ++EAE +
Sbjct: 129 IHGFCLKIGFEMMVEVG--------NSLVDMYSKCGRINEAEKVF 165
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/694 (31%), Positives = 373/694 (53%), Gaps = 15/694 (2%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+ L++ CA + ++ ++H+L++ + + ++ N ++SMY + + AR++
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGY----HSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 71 FDEIPKR-SLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
FD ++ V +N+++++YS T L +M PN T S A
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLE-TLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 130 DQLMGSLLHAQVIKYGS-SEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
+G +HA V+K + S + V +L+ MY+ CG A+RI + + D V WNS+I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 189 LGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
G +N KE L F M+ +G + S + ++ A R+ N + G +HA VI
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 249 VDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMF--V 306
+L + N L+DMYSKC+ T F R+ + DL+SW ++IAGY +N +A+++F V
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
A +RM + DE +I+ A+S L + K +H +++ G +V + L+++Y K
Sbjct: 479 AKKRMEI---DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKC 534
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGAL 426
+ +VF I KD+V WT MI + G+ A++LF +M GL D+ AL L
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 427 SACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLK 486
SA A L+ L +G IH + G +E S+ ++VDMYA GDL++A+++F ++ L
Sbjct: 595 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 654
Query: 487 CWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQM 546
+ +++ Y +G + A +F+ + + PD I+FL+LL ACSH+GL++ G+ M
Sbjct: 655 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 547 K-EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSR 605
+ E+ L P +HY C+V +L RA + EA + + +E E+W LL+ C +
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV-KMMKTEPTAEVWCALLAACRSHSEKE 773
Query: 606 MVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAK 665
+ AA+++L L+P++ +L+SN++A GRW+ V K+R KMK S + K PG SWIE
Sbjct: 774 IGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Query: 666 NNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKLV 699
VH F++ D+SHP+ + +L + + + V
Sbjct: 834 GKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 867
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 272/518 (52%), Gaps = 10/518 (1%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
A ++++C ++ + RQ+H+ + T P + + ++ ++ MYG+CGS+ DA +VF
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKT--FP-SFELDFLAGKLVFMYGKCGSLDDAEKVF 139
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGL-TFTSLAQAVSLLED 130
DE+P R+ ++N +I AY + + A L M E + P GL +F +L +A + L D
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPAS-ALALYWNMRVEGV-PLGLSSFPALLKACAKLRD 197
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDK-DAVAWNSIIL 189
GS LH+ ++K G + +L+ MY+ D +A+R+F +K DAV WNSI+
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ- 248
+ K E L LF M +G P ++ L AC GK IHA V+ S+T
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 249 VDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
+L + NAL+ MY++C A + ++ N D+V+WNS+I GY++N ++A++ F +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
K DE + +II+A+ L G LHA VIK G+DS++ VG TL++MY K
Sbjct: 378 IAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 369 AESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSA 428
+ F+ + +KD++ WT +I G+++ A++LF + ++ ++ D L L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 429 CADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCW 488
+ L + + IH + G ++ + LVD+Y K ++ A +F + D+ W
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 489 NALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSL 526
+++ + G EA +F ++E GL D + L +
Sbjct: 556 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 193/401 (48%), Gaps = 4/401 (0%)
Query: 134 GSLLHAQVIK-YGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNF 192
G LH+++ K + S E + L+ MY CG + A+++F + D+ A AWN++I
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 193 KNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLP 252
N + L+L+ M GV S+ LL AC+++ + G +H+ ++
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 253 LENALLDMYSKCSDTQTAFSVFTRI-ENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
+ NAL+ MY+K D A +F E D V WNS+++ Y +G + +++F + M
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HM 277
Query: 312 SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTG-YDSSVFVGTTLLNMYFKNGDAE 370
+ P+ YT + ++A + GK +HA V+K+ + S ++V L+ MY + G
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 371 SPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACA 430
+++ + D+V W +I G+ + + A++ F M G K D +++ ++A
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 431 DLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNA 490
L+ L G +H+ K G + V +L+DMY+K F ++ DL W
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 457
Query: 491 LLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACS 531
++ GY+ EA +F + + + DE+ S+L A S
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 7/279 (2%)
Query: 321 FAAIISATSALPASAYGKPLHALVIKTGYDSSV-FVGTTLLNMYFKNGDAESPQKVFMLI 379
FA ++ A + G+ LH+ + KT + F+ L+ MY K G + +KVF +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 380 AEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGE 439
++ W MI + G+ A+ L+ M EG+ + L ACA L ++ G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 440 MIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP-DLKCWNALLGGYSHY 498
+HS K G+ + +LV MYAKN DL AA +F D WN++L YS
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 499 GMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHY 558
G + E +F + G P+ T +S L+AC + GK + + + S + Y
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELY 321
Query: 559 SC--MVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLL 595
C ++++ +R G + +AE ++ + +++ W +L+
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVT--WNSLI 358
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 17/240 (7%)
Query: 421 ALSGALSACADLAILKQGEMIHSQAEKTGHGVEMS-VCGSLVDMYAKNGDLRAAESIFSQ 479
A + L C + QG +HS+ KT E+ + G LV MY K G L AE +F +
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 480 VLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERG 539
+ WN ++G Y G A ++ + G+ +F +LL AC+ + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 540 KILWNQMKEHSLIPGHKHYS------CMVSLLSRAGLLDEAENLIAESPYSEIRIELWRT 593
L HSL+ ++S +VS+ ++ L A L + + LW +
Sbjct: 202 SEL------HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF-DGFQEKGDAVLWNS 254
Query: 594 LLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSML 653
+LS+ S ++ ++ P ++ ++S L A G AK+ +++ S+L
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAP-NSYTIVSALTACDGF--SYAKLGKEIHASVL 311
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 284/490 (57%), Gaps = 2/490 (0%)
Query: 209 GSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQ 268
GS + + Y+ LL C+ + G+++HA ++ S + D+ + N LL+MY+KC +
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 269 TAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISAT 328
A VF ++ D V+W ++I+GY ++ A+ F + R P+E+T +++I A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY-SPNEFTLSSVIKAA 171
Query: 329 SALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWT 388
+A G LH +K G+DS+V VG+ LL++Y + G + Q VF + ++ V W
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 389 EMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKT 448
+I GH+R E A++LF M R+G + +F+ + AC+ L+QG+ +H+ K+
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 449 GHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVF 508
G + +L+DMYAK+G + A IF ++ D+ WN+LL Y+ +G +EA F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 509 EVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRA 568
E + G+RP+EI+FLS+L+ACSHSGL++ G + MK+ ++P HY +V LL RA
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 569 GLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILL 628
G L+ A I E P E +W+ LL+ C +N+ + AAE V LDP+D H++L
Sbjct: 412 GDLNRALRFIEEMPI-EPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 629 SNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAEL 688
N+YA+ GRW+ A++R+KMK S + KEP SW+E +N +H+F + D+ HP+ ++ +
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKW 530
Query: 689 HRLRGNMRKL 698
+ +++L
Sbjct: 531 EEVLAKIKEL 540
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 222/447 (49%), Gaps = 12/447 (2%)
Query: 83 NALIAAYSRDHDHAHLTFRLID--------QMEFECLRPNGLTFTSLAQAVSLLEDQLMG 134
N+L A S D + L F D +E + + + +L + ++ + + G
Sbjct: 20 NSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQG 79
Query: 135 SLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN 194
++HA +++ D + +LL MY+ CG E A+++F + +D V W ++I G ++
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 195 DKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLE 254
D+ + L F M+ G +P +F+ S ++ A + CG +H + ++ +
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 255 NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
+ALLD+Y++ A VF +E+ + VSWN++IAG+ EKA+++F + R
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-F 258
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQK 374
+P +++A++ A S+ GK +HA +IK+G F G TLL+MY K+G +K
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 375 VFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI 434
+F +A++D+V W ++ +++ G G+ A+ F +M R G++ + + L+AC+ +
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 435 LKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDL-RAAESIFSQVLHPDLKCWNALLG 493
L +G + +K G E ++VD+ + GDL RA I + P W ALL
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 494 GYSHYGMAEEAFMVFEVILEHGLRPDE 520
+ E E + E L PD+
Sbjct: 439 ACRMHKNTELGAYAAEHVFE--LDPDD 463
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 190/359 (52%), Gaps = 6/359 (1%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R TL++ C L + R +HA +L + I M N +L+MY +CGS+ +AR+
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQS----IFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VF+++P+R V++ LI+ YS+ HD +QM PN T +S+ +A +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQ-HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
G LH +K G + V ++LL +Y+ G + A+ +F + ++ V+WN++I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
G+ + ++ L LF M+ G P+ FSY+ L ACS G GK +HA +I S ++
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
N LLDMY+K A +F R+ D+VSWNS++ Y ++G G++AV F +R
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
R+ ++P+E +F ++++A S G + L+ K G + T++++ + GD
Sbjct: 356 RVG-IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 350/653 (53%), Gaps = 17/653 (2%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
L+ C +I SL RQ H VLT N + + + ++S+YG G +DAR VFD+I
Sbjct: 50 LLSKCTNIDSL---RQSHG-VLTGNGLMGDIS---IATKLVSLYGFFGYTKDARLVFDQI 102
Query: 75 PKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMG 134
P+ + ++ Y + + + +L D + R + + F+ +A + L+D G
Sbjct: 103 PEPDFYLWKVMLRCYCLNKESVEVV-KLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 135 SLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN 194
+H Q++K S D V T LL MY+ CG+ +SA ++F I ++ V W S+I G KN
Sbjct: 162 KKIHCQLVKV-PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 195 DKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLE 254
D +EGL LF M + V +++Y L+ AC+++ GK H ++ S ++ L
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 255 NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
+LLDMY KC D A VF + DLV W +MI GY NG+ +A+ +F ++ + +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-I 339
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTG-YDSSVFVGTTLLNMYFKNGDAESPQ 373
KP+ T A+++S + G+ +H L IK G +D++ V L++MY K +
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAK 397
Query: 374 KVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLA 433
VF + +EKDIV W +I G S+ G A+ LF +M E + + ++ SACA L
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 434 ILKQGEMIHSQAEKTGHGVEMS--VCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNAL 491
L G +H+ + K G S V +L+D YAK GD ++A IF + + W+A+
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 492 LGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQM-KEHS 550
+GGY G + +FE +L+ +P+E TF S+LSAC H+G+V GK ++ M K+++
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 551 LIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQA 610
P KHY+CMV +L+RAG L++A ++I + P + + + L C +
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPI-QPDVRCFGAFLHGCGMHSRFDLGEIV 636
Query: 611 AEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIE 663
+++L L P+D + ++L+SNLYA+ GRW+ ++R MK L K G S +E
Sbjct: 637 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+A+L CAS+ SL +HA + + + S ++ +L Y +CG + AR +F
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLA--SSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQ 131
D I +++ ++++A+I Y + D + L ++M + +PN TFTS+ A
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIG-SLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 132 LMGSLLHAQVIK-YGSSEDTCVQTSLLGMYSNCGDFESAKRI 172
G + + K Y + T T ++ M + G+ E A I
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/610 (32%), Positives = 322/610 (52%), Gaps = 67/610 (10%)
Query: 155 SLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNP 214
++L YS GD +S F + +D+V+W ++I+G + + + + G MV G+ P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 215 TQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVF 274
TQF+ + +L + + GK +H+ ++ + ++ + N+LL+MY+KC D A VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 275 TRI-------------------------------ENPDLVSWNSMIAGYMENGNGEKAVD 303
R+ D+V+WNSMI+G+ + G +A+D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 304 MFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFV-------- 355
+F + R SLL PD +T A+++SA + L GK +H+ ++ TG+D S V
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 356 -------------------------GTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEM 390
T LL+ Y K GD + +F+ + ++D+V WT M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 391 IIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGH 450
I+G+ + G AI LF M G + +++ L+ LS + LA L G+ IH A K+G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 451 GVEMSVCGSLVDMYAKNGDLRAAESIFSQV-LHPDLKCWNALLGGYSHYGMAEEAFMVFE 509
+SV +L+ MYAK G++ +A F + D W +++ + +G AEEA +FE
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 510 VILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYSCMVSLLSRA 568
+L GLRPD IT++ + SAC+H+GLV +G+ ++ MK+ +IP HY+CMV L RA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 569 GLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILL 628
GLL EA+ I + P E + W +LLS C +N + AAE++L L+PE+ + L
Sbjct: 565 GLLQEAQEFIEKMPI-EPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Query: 629 SNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAEL 688
+NLY+A G+W+ AK+R+ MK + KE G SWIE K+ VHVF D +HP+ ++ +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Query: 689 HRLRGNMRKL 698
++ ++K+
Sbjct: 684 KKIWDEIKKM 693
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 245/515 (47%), Gaps = 70/515 (13%)
Query: 46 QSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQ 105
++ + +N VLS Y + G + + FD++P+R VS+ +I Y ++ H R++
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY-KNIGQYHKAIRVMGD 136
Query: 106 MEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGD 165
M E + P T T++ +V+ G +H+ ++K G + V SLL MY+ CGD
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 166 FESAKRIFGL-------------------------------IGDKDAVAWNSIILGNFKN 194
AK +F + ++D V WNS+I G +
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 195 DKMKEGLSLFGAMV-GSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPL 253
L +F M+ S ++P +F+ + +L+AC+ + GK IH+ ++ + + +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 254 ENALLDMYSKCSDTQTAF---------------------------------SVFTRIENP 280
NAL+ MYS+C +TA ++F +++
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 281 DLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPL 340
D+V+W +MI GY ++G+ +A+++F ++ +P+ YT AA++S S+L + ++GK +
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 341 HALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLI-AEKDIVLWTEMIIGHSRMGD 399
H +K+G SV V L+ MY K G+ S + F LI E+D V WT MII ++ G
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 400 GECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGV-EMSVCG 458
E A++LF M EGL+ D+ G SAC ++ QG + + +S
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 459 SLVDMYAKNGDLRAAESIFSQV-LHPDLKCWNALL 492
+VD++ + G L+ A+ ++ + PD+ W +LL
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 80/438 (18%)
Query: 207 MVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLE-----NALLDMY 261
++ SG+ + + + L+N S+ G +HAR + ++PL N +L Y
Sbjct: 40 VIKSGLMFSVYLMNNLMNVYSK-----TGYALHARKLFD----EMPLRTAFSWNTVLSAY 90
Query: 262 SKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTF 321
SK D + F ++ D VSW +MI GY G KA+ + + + + +P ++T
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTL 149
Query: 322 AAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVF--MLI 379
++++ +A GK +H+ ++K G +V V +LLNMY K GD + VF M++
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 380 -----------------------------AEKDIVLWTEMIIGHSRMGDGECAIKLFCKM 410
AE+DIV W MI G ++ G A+ +F KM
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 411 CREG-LKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVE----------MSVCG- 458
R+ L D F L+ LSACA+L L G+ IHS TG + S CG
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 459 ----------------------SLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYS 496
+L+D Y K GD+ A++IF + D+ W A++ GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 497 HYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHK 556
+G EA +F ++ G RP+ T ++LS S + GK + + I
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 557 HYSCMVSLLSRAGLLDEA 574
+ ++++ ++AG + A
Sbjct: 450 VSNALITMYAKAGNITSA 467
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 140/302 (46%), Gaps = 44/302 (14%)
Query: 334 SAYGKPLHALVIKTGYDS----SVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTE 389
+ Y K +AL + +D + F T+L+ Y K GD +S + F + ++D V WT
Sbjct: 57 NVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTT 116
Query: 390 MIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTG 449
MI+G+ +G AI++ M +EG++ F L+ L++ A ++ G+ +HS K G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 450 HGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFE 509
+SV SL++MYAK GD A+ +F +++ D+ WNA++ + G + A FE
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 510 VILEHG--------------------------------LRPDEITFLSLLSACSHSGLVE 537
+ E L PD T S+LSAC++ +
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 538 RGKILWNQMKEHSLIPGHK----HYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRT 593
GK Q+ H + G + ++S+ SR G ++ A LI + +++IE +
Sbjct: 297 IGK----QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 594 LL 595
LL
Sbjct: 353 LL 354
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 50/346 (14%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ- 69
+A+++ CA++ L +QIH+ ++TT S + N ++SMY RCG + AR+
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGF----DISGIVLNALISMYSRCGGVETARRL 336
Query: 70 --------------------------------VFDEIPKRSLVSYNALIAAYSRDHDHAH 97
+F + R +V++ A+I Y + H
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ-HGSYG 395
Query: 98 LTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLL 157
L M RPN T ++ S L G +H +K G V +L+
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 158 GMYSNCGDFESAKRIFGLIG-DKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQ 216
MY+ G+ SA R F LI ++D V+W S+I+ ++ +E L LF M+ G+ P
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 217 FSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLEN---ALLDMYSKCSDTQTAFSV 273
+Y + +AC+ G G+ ++ + +P + ++D++ + Q A
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFD--MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 274 FTRIE-NPDLVSWNSMIAGYMENGNGEKAVDM-FVALRRMSLLKPD 317
++ PD+V+W S+++ + N +D+ VA R+ LL+P+
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKN----IDLGKVAAERLLLLEPE 615
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 341/651 (52%), Gaps = 13/651 (1%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQ--SPYMYNNVLSMYGRCGSIRDARQVFD 72
++ CA + +H LVL N + ++Y Y +CG ++DA VFD
Sbjct: 131 VVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY-----FYSKCGFLQDACLVFD 185
Query: 73 EIPKRSLVSYNALIAAYSRDHDHAHLTFRL--IDQMEFECLRPNGLTFTSLAQAVSLLED 130
E+P R +V++ A+I+ + ++ + L + + +PN T QA S L
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
G LH +K G + VQ+S+ YS G+ A F +GD+D +W SII
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVD 250
++ M+E +F M G++P S L+N +M GK H VI +D
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 251 LPLENALLDMYSKCSDTQTAFSVFTRI-ENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
+ N+LL MY K A +F RI E + +WN+M+ GY + K +++F ++
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
+ + + D + ++IS+ S + A GK LH V+KT D ++ V +L+++Y K GD
Sbjct: 426 NLGI-EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSAC 429
++F A+ +++ W MI + E AI LF +M E K + L L AC
Sbjct: 485 TVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 430 ADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWN 489
+ L++G+MIH +T H + +S+ +L+DMYAK G L + +F D CWN
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 490 ALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEH 549
++ GY +G E A +F+ + E ++P TFL+LLSAC+H+GLVE+GK L+ +M ++
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 550 SLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQ 609
+ P KHYSC+V LLSR+G L+EAE+ + P+S + +W TLLS+C+ M I+
Sbjct: 664 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGV-IWGTLLSSCMTHGEFEMGIR 722
Query: 610 AAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLS 660
AE+ + DP++ +I+L+N+Y+A G+W+ + R M+ S +GK G S
Sbjct: 723 MAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/574 (25%), Positives = 284/574 (49%), Gaps = 14/574 (2%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R+I+ ++ C SL+ R+ +AL++T +++ ++ + ++S Y G + +
Sbjct: 27 RHISVIL--CDQSLSLESLRKHNALIITGGL----SENIFVASKLISSYASYGKPNLSSR 80
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VF + +R + +N++I A+ + D+A + M P+ T + A + L
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHFSNGDYAR-SLCFFFSMLLSGQSPDHFTAPMVVSACAELL 139
Query: 130 DQLMGSLLHAQVIKYGS-SEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
+G+ +H V+K+G +T V S + YS CG + A +F + D+D VAW +II
Sbjct: 140 WFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAII 199
Query: 189 LGNFKNDKMKEGLSLFGAM--VGSGVN-PTQFSYSMLLNACSRMGNFVCGKVIHARVIIS 245
G+ +N + + GL M GS V+ P + ACS +G G+ +H + +
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 246 NTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMF 305
+++++ YSK + A+ F + + D+ SW S+IA +G+ E++ DMF
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 306 VALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFK 365
++ + PD + +I+ + GK H VI+ + V +LL+MY K
Sbjct: 320 WEMQNKG-MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCK 378
Query: 366 NGDAESPQKVFMLIAEK-DIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
+K+F I+E+ + W M+ G+ +M I+LF K+ G++ D+ + +
Sbjct: 379 FELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATS 438
Query: 425 ALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPD 484
+S+C+ + + G+ +H KT + +SV SL+D+Y K GDL A +F + +
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTN 497
Query: 485 LKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWN 544
+ WNA++ Y H +E+A +F+ ++ +P IT ++LL AC ++G +ERG+++
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 545 QMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLI 578
+ E + ++ + ++ G L+++ L
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 225/475 (47%), Gaps = 7/475 (1%)
Query: 138 HAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKM 197
+A +I G SE+ V + L+ Y++ G + R+F L+ +D WNSII +F N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 198 KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVII-SNTQVDLPLENA 256
L F +M+ SG +P F+ M+++AC+ + F G +H V+ + + +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 257 LLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMS--LL 314
+ YSKC Q A VF + + D+V+W ++I+G+++NG E + + +
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQK 374
KP+ T A S L A G+ LH +K G SS FV +++ + Y K+G+
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 375 VFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI 434
F + ++D+ WT +I +R GD E + +F +M +G+ D +S ++ + +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 435 LKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLK-CWNALLG 493
+ QG+ H + ++ +VC SL+ MY K L AE +F ++ K WN +L
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 494 GYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIP 553
GY + +F I G+ D + S++S+CSH G V GK L + + SL
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 554 GHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVI 608
+ ++ L + G L A + E ++ + W ++++ V S I
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCE---ADTNVITWNAMIASYVHCEQSEKAI 518
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+ TL+ C + SL+R + IH + T H + + ++ MY +CG + +R++
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEH----EMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
FD ++ V +N +I+ Y H L DQME ++P G TF +L A +
Sbjct: 591 FDAGNQKDAVCWNVMISGYGM-HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKR-IFGLIGDKDAVAWNSIIL 189
G L ++ +Y + + L+ + S G+ E A+ + + D V W +++
Sbjct: 650 VEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNF 232
+ + + G+ + V S + Y ML N S G +
Sbjct: 710 SCMTHGEFEMGIRMAERAVASDPQNDGY-YIMLANMYSAAGKW 751
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/650 (31%), Positives = 340/650 (52%), Gaps = 5/650 (0%)
Query: 49 YMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEF 108
++ N ++ MY R G + ARQVFDE+P R LVS+N+LI+ YS H + + +++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS-SHGYYEEALEIYHELKN 200
Query: 109 ECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFES 168
+ P+ T +S+ A L G LH +K G + V L+ MY
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 169 AKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSR 228
A+R+F + +D+V++N++I G K + ++E + +F + P + S +L AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGH 319
Query: 229 MGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSM 288
+ + K I+ ++ + ++ + N L+D+Y+KC D TA VF +E D VSWNS+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 289 IAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTG 348
I+GY+++G+ +A+ +F + M + D T+ +IS ++ L +GK LH+ IK+G
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 349 YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFC 408
+ V L++MY K G+ K+F + D V W +I R GD +++
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 409 KMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNG 468
+M + + D L CA LA + G+ IH + G+ E+ + +L++MY+K G
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 469 DLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
L + +F ++ D+ W ++ Y YG E+A F + + G+ PD + F++++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 529 ACSHSGLVERGKILWNQMKEHSLI-PGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIR 587
ACSHSGLV+ G + +MK H I P +HY+C+V LLSR+ + +AE I P
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKP-D 677
Query: 588 IELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRK 647
+W ++L C + + + +++ L+P+D IL SN YAA +WD V+ +R+
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 648 MKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRK 697
+K + K PG SWIE NVHVFSSGD S P+ + L L M K
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 250/522 (47%), Gaps = 8/522 (1%)
Query: 20 ASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI-PKRS 78
+S ++L R+IHALV++ S + ++ Y + VF + P ++
Sbjct: 15 SSSSNLNELRRIHALVISLGL----DSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 79 LVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLH 138
+ +N++I A+S++ ++ + P+ TF S+ +A + L D MG L++
Sbjct: 71 VYLWNSIIRAFSKNGLFPE-ALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 139 AQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMK 198
Q++ G D V +L+ MYS G A+++F + +D V+WNS+I G + +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 199 EGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALL 258
E L ++ + S + P F+ S +L A + G+ +H + S + + N L+
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 259 DMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDE 318
MY K A VF ++ D VS+N+MI GY++ E++V MF L + KPD
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDL 307
Query: 319 YTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFML 378
T ++++ A L + K ++ ++K G+ V L+++Y K GD + + VF
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 379 IAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQG 438
+ KD V W +I G+ + GD A+KLF M + D+ +S LA LK G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 439 EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHY 498
+ +HS K+G +++SV +L+DMYAK G++ + IFS + D WN ++ +
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 499 GMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGK 540
G V + + + PD TFL L C+ GK
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGK 529
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 215 TQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVF 274
T+ S + A S N + IHA VI L+D YS + ++ SVF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 275 TRIE-NPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPA 333
R+ ++ WNS+I + +NG +A++ + LR S + PD+YTF ++I A + L
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGLFD 121
Query: 334 SAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIG 393
+ G ++ ++ G++S +FVG L++MY + G ++VF + +D+V W +I G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 394 HSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVE 453
+S G E A++++ ++ + D+F +S L A +L ++KQG+ +H A K+G
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 454 MSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILE 513
+ V LV MY K A +F ++ D +N ++ GY M EE+ +F L+
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 514 HGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDE 573
+PD +T S+L AC H + K ++N M + + + ++ + ++ G +
Sbjct: 302 Q-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT 360
Query: 574 AENLI 578
A ++
Sbjct: 361 ARDVF 365
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 210/682 (30%), Positives = 352/682 (51%), Gaps = 15/682 (2%)
Query: 13 ATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD 72
A L++ C +SLK RQI LV Q + ++S++ R GS+ +A +VF+
Sbjct: 41 ALLLERC---SSLKELRQILPLVFKNGLY----QEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 73 EIPKRSLVSYNALIAAYSR--DHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
I + V Y+ ++ +++ D D A + +M ++ + P FT L + +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKA---LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 150
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
+G +H ++K G S D T L MY+ C A+++F + ++D V+WN+I+ G
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVD 250
+N + L + +M + P+ + +L A S + GK IH + S
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 251 LPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRR 310
+ + AL+DMY+KC +TA +F + ++VSWNSMI Y++N N ++A+ +F +
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 311 MSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAE 370
+ KP + + + A + L G+ +H L ++ G D +V V +L++MY K + +
Sbjct: 331 EGV-KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 371 SPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACA 430
+ +F + + +V W MI+G ++ G A+ F +M +K D F ++A A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 431 DLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNA 490
+L+I + IH ++ + V +LVDMYAK G + A IF + + WNA
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 491 LLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-H 549
++ GY +G + A +FE + + ++P+ +TFLS++SACSHSGLVE G + MKE +
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 550 SLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQ 609
S+ HY MV LL RAG L+EA + I + P + ++ +L C +N +
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA-VNVYGAMLGACQIHKNVNFAEK 628
Query: 610 AAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVH 669
AAE++ L+P+DG H+LL+N+Y A W+ V ++R M L K PG S +E KN VH
Sbjct: 629 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688
Query: 670 VFSSGDQSHPKIDDAQAELHRL 691
F SG +HP A L +L
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKL 710
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 295/548 (53%), Gaps = 22/548 (4%)
Query: 6 ENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIR 65
E + N L+++C L+ ++IH L++ + + + + +MY +C +
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF----SLDLFAMTGLENMYAKCRQVN 187
Query: 66 DARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAV 125
+AR+VFD +P+R LVS+N ++A YS++ A + ++ M E L+P+ +T S+ AV
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQN-GMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 126 SLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWN 185
S L +G +H ++ G + T+L+ MY+ CG E+A+++F + +++ V+WN
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWN 306
Query: 186 SIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIIS 245
S+I +N+ KE + +F M+ GV PT S L+AC+ +G+ G+ IH +
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 246 NTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMF 305
++ + N+L+ MY KC + TA S+F ++++ LVSWN+MI G+ +NG A++ F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 306 VALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFK 365
+R + +KPD +T+ ++I+A + L + + K +H +V+++ D +VFV T L++MY K
Sbjct: 427 SQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 366 NGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGA 425
G + +F +++E+ + W MI G+ G G+ A++LF +M + +K +
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 426 LSACADLAILKQG-EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQV-LHP 483
+SAC+ +++ G + + E + M G++VD+ + G L A Q+ + P
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 484 DLKCWNALLGG---YSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGK 540
+ + A+LG + + AE+A E + E L PD+ + LL+ + R
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKA---AERLFE--LNPDDGGYHVLLAN------IYRAA 654
Query: 541 ILWNQMKE 548
+W ++ +
Sbjct: 655 SMWEKVGQ 662
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 320/563 (56%), Gaps = 4/563 (0%)
Query: 137 LHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDK 196
+HA+++ G + T L+ S+ GD A+++F + WN+II G +N+
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 197 MKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENA 256
++ L ++ M + V+P F++ LL ACS + + G+ +HA+V D+ ++N
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG 159
Query: 257 LLDMYSKCSDTQTAFSVFTRIENPD--LVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
L+ +Y+KC +A +VF + P+ +VSW ++++ Y +NG +A+++F +R+M +
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV- 218
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQK 374
KPD ++++A + L G+ +HA V+K G + + +L MY K G + +
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 375 VFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI 434
+F + +++LW MI G+++ G AI +F +M + ++ D +++ A+SACA +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 435 LKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGG 494
L+Q ++ ++ + ++ + +L+DM+AK G + A +F + L D+ W+A++ G
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 495 YSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPG 554
Y +G A EA ++ + G+ P+++TFL LL AC+HSG+V G +N+M +H + P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ 458
Query: 555 HKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQV 614
+HY+C++ LL RAG LD+A +I P + + +W LLS C R+ + AA+Q+
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPV-QPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 615 LRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSG 674
+DP + ++ LSNLYAA WD VA++R +MK L K+ G SW+E + + F G
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Query: 675 DQSHPKIDDAQAELHRLRGNMRK 697
D+SHP+ ++ + ++ + +++
Sbjct: 578 DKSHPRYEEIERQVEWIESRLKE 600
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 247/491 (50%), Gaps = 14/491 (2%)
Query: 21 SITSLKRARQIHALVLTTNHIPINAQ-SPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSL 79
S T + +QIHA +L + Q S ++ ++ G I ARQVFD++P+ +
Sbjct: 30 SATHKAQLKQIHARLLV-----LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 80 VSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHA 139
+NA+I YSR+ +H + M+ + P+ TF L +A S L MG +HA
Sbjct: 85 FPWNAIIRGYSRN-NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 140 QVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIF-GL-IGDKDAVAWNSIILGNFKNDKM 197
QV + G D VQ L+ +Y+ C SA+ +F GL + ++ V+W +I+ +N +
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 198 KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENAL 257
E L +F M V P + +LNA + + + G+ IHA V+ +++ L +L
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 258 LDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPD 317
MY+KC TA +F ++++P+L+ WN+MI+GY +NG +A+DMF + ++PD
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPD 322
Query: 318 EYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFM 377
+ + ISA + + + + ++ V ++ Y VF+ + L++M+ K G E + VF
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 378 LIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQ 437
++D+V+W+ MI+G+ G AI L+ M R G+ ++ G L AC ++++
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 438 GEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDL-RAAESIFSQVLHPDLKCWNALLGG-- 494
G ++ + ++D+ + G L +A E I + P + W ALL
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
Query: 495 -YSHYGMAEEA 504
+ H + E A
Sbjct: 503 KHRHVELGEYA 513
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 175/315 (55%), Gaps = 8/315 (2%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD-- 72
L++ C+ ++ L+ R +HA V + +A ++ N ++++Y +C + AR VF+
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVF---RLGFDADV-FVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 73 EIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL 132
+P+R++VS+ A+++AY+++ + + QM ++P+ + S+ A + L+D
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPME-ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 133 MGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNF 192
G +HA V+K G + + SL MY+ CG +AK +F + + + WN++I G
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 193 KNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLP 252
KN +E + +F M+ V P S + ++AC+++G+ + ++ V S+ + D+
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 253 LENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMS 312
+ +AL+DM++KC + A VF R + D+V W++MI GY +G +A+ ++ A+ R
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 313 LLKPDEYTFAAIISA 327
+ P++ TF ++ A
Sbjct: 420 -VHPNDVTFLGLLMA 433
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+ +++ + LK+ R IHA V+ + I P + ++ +MY +CG + A+ +F
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMG-LEIE---PDLLISLNTMYAKCGQVATAKILF 280
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQ 131
D++ +L+ +NA+I+ Y+++ +A + +M + +RP+ ++ TS A + +
Sbjct: 281 DKMKSPNLILWNAMISGYAKN-GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
++ V + +D + ++L+ M++ CG E A+ +F D+D V W+++I+G
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+ + +E +SL+ AM GV+P ++ LL AC+ G G R+
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQ 459
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIE-NPDLVSWNSMIAG 291
++D+ + A+ V + P + W ++++
Sbjct: 460 QHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 45/313 (14%)
Query: 312 SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAES 371
S + D + + I SAT A K +HA ++ G S F+ T L++ GD
Sbjct: 16 SGIHSDSFYASLIDSATH----KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 372 PQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACAD 431
++VF + I W +I G+SR + A+ ++ M + D+F L AC+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 432 LAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPD--LKCWN 489
L+ L+ G +H+Q + G ++ V L+ +YAK L +A ++F + P+ + W
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 490 ALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACS-----------HSGLVER 538
A++ Y+ G EA +F + + ++PD + +S+L+A + H+ +V+
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 539 G------------------------KILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEA 574
G KIL+++MK +LI ++ M+S ++ G EA
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL----WNAMISGYAKNGYAREA 307
Query: 575 ENLIAESPYSEIR 587
++ E ++R
Sbjct: 308 IDMFHEMINKDVR 320
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 314/581 (54%), Gaps = 15/581 (2%)
Query: 104 DQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNC 163
DQ+ F + + SLA +G +H +K G V SL+ MY
Sbjct: 314 DQVTFILMLATAVKVDSLA----------LGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 164 GDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLL 223
F A+ +F + ++D ++WNS+I G +N E + LF ++ G+ P Q++ + +L
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 224 NACSRMGN-FVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDL 282
A S + K +H I N D + AL+D YS+ + A +F R N DL
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDL 482
Query: 283 VSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHA 342
V+WN+M+AGY ++ +G K + +F + + + D++T A + L A GK +HA
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 343 LVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGEC 402
IK+GYD ++V + +L+MY K GD + Q F I D V WT MI G G+ E
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 403 AIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVD 462
A +F +M G+ D F ++ A + L L+QG IH+ A K + V SLVD
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 463 MYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEIT 522
MYAK G + A +F ++ ++ WNA+L G + +G +E +F+ + G++PD++T
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Query: 523 FLSLLSACSHSGLV-ERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAES 581
F+ +LSACSHSGLV E K + + ++ + P +HYSC+ L RAGL+ +AENLI ES
Sbjct: 722 FIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI-ES 780
Query: 582 PYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCV 641
E ++RTLL+ C + ++ + A ++L L+P D + ++LLSN+YAA +WD +
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 642 AKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKID 682
R MKG + K+PG SWIE KN +H+F D+S+ + +
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTE 881
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 265/547 (48%), Gaps = 21/547 (3%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
++ + SL +Q+H + L + S N++++MY + AR VFD +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVS----NSLINMYCKLRKFGFARTVFDNM 376
Query: 75 PKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL-M 133
+R L+S+N++IA +++ L Q+ L+P+ T TS+ +A S L + L +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVC-LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 134 GSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFK 193
+H IK + D+ V T+L+ YS + A+ +F + D VAWN+++ G +
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 194 NDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPL 253
+ + L LF M G F+ + + C + GK +HA I S +DL +
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 254 ENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSL 313
+ +LDMY KC D A F I PD V+W +MI+G +ENG E+A +F +R M +
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 314 LKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQ 373
L PDE+T A + A+S L A G+ +HA +K + FVGT+L++MY K G +
Sbjct: 615 L-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 374 KVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLA 433
+F I +I W M++G ++ G+G+ ++LF +M G+K D G LSAC+
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 434 ILKQGEMIHSQAEKTGHGV--EMSVCGSLVDMYAKNGDLRAAESIF-SQVLHPDLKCWNA 490
++ + H ++ +G+ E+ L D + G ++ AE++ S + +
Sbjct: 734 LVSEAYK-HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
Query: 491 LLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMK-EH 549
LL G E V +LE L P + + LLS + W++MK
Sbjct: 793 LLAACRVQGDTETGKRVATKLLE--LEPLDSSAYVLLSN------MYAAASKWDEMKLAR 844
Query: 550 SLIPGHK 556
+++ GHK
Sbjct: 845 TMMKGHK 851
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/583 (23%), Positives = 267/583 (45%), Gaps = 65/583 (11%)
Query: 32 HALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSR 91
HA +LT P ++ NN++SMY +CGS+ AR+VFD++P R LVS+N+++AAY++
Sbjct: 62 HARILTFEENP----ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 92 DHD-------HAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKY 144
+ A L FR++ Q + + + +T + + + H K
Sbjct: 118 SSECVVENIQQAFLLFRILRQ---DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 145 GSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLF 204
G D V +L+ +Y G + K +F + +D V WN ++ + +E + L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 205 GAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKC 264
A SG+NP + + +L AR+ ++ + + ++
Sbjct: 235 SAFHSSGLNPNEITLRLL-----------------ARISGDDS------DAGQVKSFANG 271
Query: 265 SDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAI 324
+D + + R N ++ Y+ +G + F + S ++ D+ TF +
Sbjct: 272 NDASSVSEIIFR---------NKGLSEYLHSGQYSALLKCFADMVE-SDVECDQVTFILM 321
Query: 325 ISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDI 384
++ + + A G+ +H + +K G D + V +L+NMY K + VF ++E+D+
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 385 VLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI-LKQGEMIHS 443
+ W +I G ++ G A+ LF ++ R GLK D + ++ L A + L L + +H
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 444 QAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEE 503
A K + + V +L+D Y++N ++ AE +F + + DL WNA++ GY+ +
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHK 500
Query: 504 AFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVS 563
+F ++ + G R D+ T ++ C + +GK Q+ +++ G+ +
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK----QVHAYAIKSGYD-----LD 551
Query: 564 LLSRAGLLDE----AENLIAESPYSEIRIE---LWRTLLSTCV 599
L +G+LD + A+ + I + W T++S C+
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 189/443 (42%), Gaps = 54/443 (12%)
Query: 109 ECLRPNGLT---------------FTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQ 153
+CLRP T F L A++ D ++G HA+++ + + + +
Sbjct: 19 QCLRPLRFTSAASPSSSSSSSSQWFGFLRNAITS-SDLMLGKCTHARILTFEENPERFLI 77
Query: 154 TSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN-----DKMKEGLSLFGAMV 208
+L+ MYS CG A+R+F + D+D V+WNSI+ ++ + +++ LF +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 209 GSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQ 268
V ++ + S +L C G + H D + AL+++Y K +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 269 TAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISAT 328
+F + D+V WN M+ Y+E G E+A+D+ A S L P+E T
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS-SGLNPNEITL------- 249
Query: 329 SALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWT 388
L A G A +K+ F NG+ S + +I+
Sbjct: 250 -RLLARISGDDSDAGQVKS----------------FANGNDAS--------SVSEIIFRN 284
Query: 389 EMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKT 448
+ + + G +K F M ++CD L+ + L G+ +H A K
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 449 GHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVF 508
G + ++V SL++MY K A ++F + DL WN+++ G + G+ EA +F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 509 EVILEHGLRPDEITFLSLLSACS 531
+L GL+PD+ T S+L A S
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAAS 427
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 5/220 (2%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+AT+ + C + ++ + +Q+HA + + + ++ + +L MY +CG + A+
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGY----DLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
FD IP V++ +I+ + + F + QM + P+ T +LA+A S L
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEER-AFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
G +HA +K + D V TSL+ MY+ CG + A +F I + AWN++++G
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMG 230
++ + KE L LF M G+ P + ++ +L+ACS G
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 355/666 (53%), Gaps = 23/666 (3%)
Query: 49 YMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQM-E 107
Y+ N +L Y + G + A +FDE+PKR VS+N +I+ Y+ +L D
Sbjct: 36 YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS-------CGKLEDAWCL 88
Query: 108 FECLRP-----NGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSN 162
F C++ +G +F+ L + ++ ++ +G +H VIK G + V +SL+ MY+
Sbjct: 89 FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAK 148
Query: 163 CGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAM-VGSGVNPTQFSYSM 221
C E A F I + ++V+WN++I G + +K L G M + + V +++
Sbjct: 149 CERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAP 208
Query: 222 LLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIE-NP 280
LL K +HA+V+ Q ++ + NA++ Y+ C A VF + +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 281 DLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPL 340
DL+SWNSMIAG+ ++ E A ++F+ ++R ++ D YT+ ++SA S +GK L
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 341 HALVIKTGYDSSVFVGTTLLNMY--FKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMG 398
H +VIK G + L++MY F G E +F + KD++ W +I G ++ G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 399 DGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCG 458
E A+K F + +K D++A S L +C+DLA L+ G+ IH+ A K+G V
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 459 SLVDMYAKNGDLRAAESIFSQV--LHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGL 516
SL+ MY+K G + +A F Q+ H + WNA++ GY+ +G+ + + +F + +
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTV-AWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 517 RPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAE 575
+ D +TF ++L+ACSH+GL++ G L N M+ + + P +HY+ V LL RAGL+++A+
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 576 NLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAAT 635
LI P + + L +T L C A M Q A +L ++PED T++ LS++Y+
Sbjct: 567 ELIESMPLNPDPMVL-KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDL 625
Query: 636 GRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNM 695
+W+ A +++ MK + K PG SWIE +N V F++ D+S+P D + L M
Sbjct: 626 KKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Query: 696 RKLVTD 701
+ L +D
Sbjct: 686 QWLDSD 691
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 216/443 (48%), Gaps = 3/443 (0%)
Query: 135 SLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN 194
SL H IK GS D V +L Y G A +F + +D+V+WN++I G
Sbjct: 20 SLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 195 DKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLE 254
K+++ LF M SG + +S+S LL + + F G+ +H VI + ++ +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 255 NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
++L+DMY+KC + AF F I P+ VSWN++IAG+++ + + A + + + +
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQK 374
D TFA +++ K +HA V+K G + + +++ Y G ++
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 375 VF-MLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLA 433
VF L KD++ W MI G S+ E A +LF +M R ++ D + +G LSAC+
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 434 ILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAK--NGDLRAAESIFSQVLHPDLKCWNAL 491
G+ +H K G S +L+ MY + G + A S+F + DL WN++
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 492 LGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSL 551
+ G++ G++E+A F + ++ D+ F +LL +CS ++ G+ + +
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 552 IPGHKHYSCMVSLLSRAGLLDEA 574
+ S ++ + S+ G+++ A
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESA 462
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 330/630 (52%), Gaps = 72/630 (11%)
Query: 137 LHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIF----------------GL----- 175
+HA VIK G S + +Q L+ YS CG E +++F GL
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 176 ----------IGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNA 225
+ ++D WNS++ G ++D+ +E L F M G ++S++ +L+A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 226 CSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSW 285
CS + + G +H+ + S D+ + +AL+DMYSKC + A VF + + ++VSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 286 NSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVI 345
NS+I + +NG +A+D+F + S ++PDE T A++ISA ++L A G+ +H V+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLE-SRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 346 KTG----------------------------YDS----SVFVGTTLLNMYFKNGDAESPQ 373
K +DS +V T++++ Y ++ +
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 374 KVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLA 433
+F +AE+++V W +I G+++ G+ E A+ LFC + RE + +++ + L ACADLA
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 434 ILKQGEMIHSQAEK------TGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKC 487
L G H K +G ++ V SL+DMY K G + +F +++ D
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 488 WNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQM- 546
WNA++ G++ G EA +F +LE G +PD IT + +LSAC H+G VE G+ ++ M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 547 KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRM 606
++ + P HY+CMV LL RAG L+EA+++I E P + +W +LL+ C RN +
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV-IWGSLLAACKVHRNITL 579
Query: 607 VIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKN 666
AE++L ++P + ++LLSN+YA G+W+ V +R+ M+ + K+PG SWI+ +
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQG 639
Query: 667 NVHVFSSGDQSHPKIDDAQAELHRLRGNMR 696
+ HVF D+SHP+ + L L MR
Sbjct: 640 HDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 266/557 (47%), Gaps = 82/557 (14%)
Query: 12 IATLIQIC-ASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
A L+ C S S R +HA V+ + + ++ N ++ Y +CGS+ D RQV
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGF----SNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 71 FDEIPKRSLVSYNALIAAYSR------------------------------DHDHAHLTF 100
FD++P+R++ ++N+++ ++ HD
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 101 RLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMY 160
M E N +F S+ A S L D G +H+ + K D + ++L+ MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 161 SNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYS 220
S CG+ A+R+F +GD++ V+WNS+I +N E L +F M+ S V P + + +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 221 MLLNACSRMGNFVCGKVIHARVIISNT-QVDLPLENALLDMYSKCS-------------- 265
+++AC+ + G+ +H RV+ ++ + D+ L NA +DMY+KCS
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 266 -----------------DTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
T+ A +FT++ ++VSWN++IAGY +NG E+A+ +F L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGY------DSSVFVGTTLLNM 362
+R S+ P Y+FA I+ A + L G H V+K G+ + +FVG +L++M
Sbjct: 378 KRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 363 YFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFAL 422
Y K G E VF + E+D V W MIIG ++ G G A++LF +M G K D+ +
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 423 SGALSACADLAILKQGEMIHSQAEKTGHGV----EMSVCGSLVDMYAKNGDLRAAESIFS 478
G LSAC +++G S + GV + C +VD+ + G L A+S+
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRD-FGVAPLRDHYTC--MVDLLGRAGFLEEAKSMIE 553
Query: 479 QV-LHPDLKCWNALLGG 494
++ + PD W +LL
Sbjct: 554 EMPMQPDSVIWGSLLAA 570
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 65/377 (17%)
Query: 219 YSMLLNACSRMG-NFVCGKVIHARVIISNTQVDLPLENALLDMYSKC---SDTQTAF--- 271
++ LL++C + + + + +HA VI S ++ ++N L+D YSKC D + F
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 272 -------------------------SVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFV 306
S+F + D +WNSM++G+ ++ E+A+ F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 307 ALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKN 366
+ + + +EY+FA+++SA S L G +H+L+ K+ + S V++G+ L++MY K
Sbjct: 142 MMHKEGFV-LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 367 GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGAL 426
G+ Q+VF + ++++V W +I + G A+ +F M ++ D L+ +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 427 SACADLAILKQGEMIHSQAEKTGH-GVEMSVCGSLVDMYAK------------------- 466
SACA L+ +K G+ +H + K ++ + + VDMYAK
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 467 ------------NGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEH 514
+AA +F+++ ++ WNAL+ GY+ G EEA +F ++
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 515 GLRPDEITFLSLLSACS 531
+ P +F ++L AC+
Sbjct: 381 SVCPTHYSFANILKACA 397
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 32/256 (12%)
Query: 317 DEYTFAAIISATSALPASA-YGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKV 375
D FA ++ + SA Y + +HA VIK+G+ + +F+ L++ Y K G E ++V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 376 FMLIAEKDIVLWTEMIIGHSRMG--------------DGEC-----------------AI 404
F + +++I W ++ G +++G +C A+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 405 KLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMY 464
F M +EG + ++ + LSAC+ L + +G +HS K+ ++ + +LVDMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 465 AKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFL 524
+K G++ A+ +F ++ ++ WN+L+ + G A EA VF+++LE + PDE+T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 525 SLLSACSHSGLVERGK 540
S++SAC+ ++ G+
Sbjct: 258 SVISACASLSAIKVGQ 273
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 3 PTHENLCRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMY--NNVLSMYGR 60
PTH + A +++ CA + L Q H VL + + ++ N+++ MY +
Sbjct: 384 PTH----YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 61 CGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTS 120
CG + + VF ++ +R VS+NA+I ++++ + + L +M +P+ +T
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN-GYGNEALELFREMLESGEKPDHITMIG 498
Query: 121 LAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKD 180
+ A HA ++ G F S R FG+ +D
Sbjct: 499 VLSACG-----------HAGFVEEGRHY-----------------FSSMTRDFGVAPLRD 530
Query: 181 AVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHA 240
+LG + ++E S+ M + P + LL AC N GK +
Sbjct: 531 HYTCMVDLLG--RAGFLEEAKSMIEEM---PMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 241 RVI 243
+++
Sbjct: 586 KLL 588
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 332 bits (851), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 341/652 (52%), Gaps = 13/652 (1%)
Query: 13 ATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD 72
++++ CAS+ L+ + + A V I A+ ++ ++ +Y +CG + +A +VF
Sbjct: 255 SSVLAACASLEKLRFGKVVQARV-----IKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 73 EIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL 132
IP S+VS+ +++ Y++ +D A + +M + N T TS+ A
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSND-AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 133 MGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNF 192
S +HA V K G D+ V +L+ MYS GD + ++++F + D ++++ +F
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 193 -KNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
++ K + + LF M+ G+ +FS LL S + GK +H + S +DL
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
+ ++L +YSKC + ++ +F I D W SMI+G+ E G +A+ +F +
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 312 SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAES 371
PDE T AA+++ S+ P+ GK +H ++ G D + +G+ L+NMY K G +
Sbjct: 546 GT-SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKL 604
Query: 372 PQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACAD 431
++V+ + E D V + +I G+S+ G + LF M G D+FA+S L A A
Sbjct: 605 ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 432 LAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNAL 491
G +H+ K G E SV SL+ MY+K G + FSQ+ PDL W AL
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTAL 724
Query: 492 LGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQM-KEHS 550
+ Y+ +G A EA V+ ++ E G +PD++TF+ +LSACSH GLVE N M K++
Sbjct: 725 IASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784
Query: 551 LIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQA 610
+ P ++HY CMV L R+G L EAE+ I + + + +W TLL+ C + A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFI-NNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
Query: 611 AEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWI 662
A++ + L+P D +I LSN+ A G WD V + R+ MKG+ + KEPG S +
Sbjct: 844 AKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 282/564 (50%), Gaps = 14/564 (2%)
Query: 22 ITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVS 81
+ +L+ + + A +L +P + ++ ++LS Y GS+ DA ++FD IP+ +VS
Sbjct: 61 LCNLRTTKILQAHLLRRYLLPFDV---FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVS 117
Query: 82 YNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQV 141
N +I+ Y + H + R +M F N +++ S+ A S L+ L L+
Sbjct: 118 CNIMISGY-KQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 142 IKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGL 201
IK G V+++L+ ++S FE A ++F + WN+II G +N
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 202 SLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMY 261
LF M P ++YS +L AC+ + GKV+ ARVI + D+ + A++D+Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 262 SKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTF 321
+KC A VF+RI NP +VSW M++GY ++ + A+++F +R S ++ + T
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH-SGVEINNCTV 354
Query: 322 AAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFM---L 378
++ISA +HA V K+G+ V L++MY K+GD + ++VF
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 379 IAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQG 438
I ++IV MI S+ AI+LF +M +EGL+ D F++ LS L L G
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLG 469
Query: 439 EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHY 498
+ +H K+G ++++V SL +Y+K G L + +F + D CW +++ G++ Y
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 499 GMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHY 558
G EA +F +L+ G PDE T ++L+ CS + RGK + + G
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 559 SCMVSLLSRAGLLDEAENLIAESP 582
S +V++ S+ G L A + P
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLP 613
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 16/313 (5%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
+A ++ +C+S SL R ++IH L I+ + + + +++MY +CGS++ ARQV
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAG---ID-KGMDLGSALVNMYSKCGSLKLARQV 608
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
+D +P+ VS ++LI+ YS+ H F L M + +S+ +A +L ++
Sbjct: 609 YDRLPELDPVSCSSLISGYSQ-HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
+G+ +HA + K G + V +SLL MYS G + + F I D +AW ++I
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVD 250
++ K E L ++ M G P + ++ +L+ACS G V H ++ + ++
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIE 786
Query: 251 LPLEN----ALLDMYSKCSDTQTAFSVFTRIE-NPDLVSWNSMIAGYMENGNGEKAVDMF 305
P EN ++D + + A S + PD + W +++A +G E
Sbjct: 787 -P-ENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGK--- 841
Query: 306 VALRRMSLLKPDE 318
VA ++ L+P +
Sbjct: 842 VAAKKAIELEPSD 854
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/613 (31%), Positives = 323/613 (52%), Gaps = 72/613 (11%)
Query: 154 TSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVN 213
TS + + G SA+++F + + D VAWN+++ + +E ++LF + S
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 214 PTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSV 273
P +S++ +L+ C+ +GN G+ I + VI S LP+ N+L+DMY KCSDT +A V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 274 FTRI--ENPDLVSWNSMIAGYMENGNGEKAVDMFVAL-RRMSL----------------- 313
F + ++ + V+W S++ YM E A+D+FV + +R++
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 314 ------------LKPDEYTFAAIISATSALPASA-YGKPLHALVIKTGYDSSVFVGTTLL 360
KPD YTF+++++A SA ++ YG+ +HA+++K G+ S+V ++L
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 361 NMY-------------------------------FKNGDAESPQKVFMLIAEKDIVLWTE 389
+ Y K G+ E +VF L EK+IV WT
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 390 MIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTG 449
MI G+ R GDGE A++ F +M + G+ D+FA L AC+ LA+L G+MIH G
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 450 HGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFE 509
V +LV++YAK GD++ A+ F + + DL WN +L + +G+A++A +++
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 510 VILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGH-KHYSCMVSLLSRA 568
++ G++PD +TF+ LL+ CSHSGLVE G +++ M + IP H +CM+ + R
Sbjct: 428 NMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 569 GLLDEAENLIAESPYSEIRIE-----LWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGT 623
G L EA++L + YS + + W TLL C ++ + + ++ + +P +
Sbjct: 488 GHLAEAKDL--ATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 624 THILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDD 683
+ +LLSNLY +TGRW +RR+M + K PG SWIE N V F GD SHP++++
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEE 605
Query: 684 AQAELHRLRGNMR 696
L+ L+ MR
Sbjct: 606 LSETLNCLQHEMR 618
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/569 (26%), Positives = 259/569 (45%), Gaps = 76/569 (13%)
Query: 59 GRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTF 118
+ G I ARQVFD +P+ V++N ++ +YSR H L Q+ F +P+ +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQE-AIALFTQLRFSDAKPDDYSF 73
Query: 119 TSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGD------------- 165
T++ + L + G + + VI+ G V SL+ MY C D
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 166 --------------------FESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFG 205
FE+A +F + + A AWN +I G+ K++ LSLF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 206 AMVGSGVNPTQFSYSMLLNACSR-MGNFVCGKVIHARVIISNTQVDLPLENALLDMYSK- 263
M+ S P +++S L+NACS N V G+++HA ++ + + +N++L Y+K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 264 ------------------------------CSDTQTAFSVFTRIENPDLVSWNSMIAGYM 293
+T+ A VF ++V+W +MI GY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 294 ENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSV 353
NG+GE+A+ FV + + S + D + + A++ A S L +GK +H +I G+
Sbjct: 314 RNGDGEQALRFFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 354 FVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCRE 413
+VG L+N+Y K GD + + F IA KD+V W M+ G + A+KL+ M
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 414 GLKCDNFALSGALSACADLAILKQGEMI-HSQAEKTGHGVEMSVCGSLVDMYAKNGDLRA 472
G+K DN G L+ C+ ++++G MI S + +E+ ++DM+ + G L
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 473 AESI---FSQVL--HPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLL 527
A+ + +S ++ + W LLG S + E V +V L+ +E++F+ L
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV-LKIAEPSEEMSFVLLS 551
Query: 528 SACSHSGLVERGKILWNQMKEHSL--IPG 554
+ +G + G+ + +M E + PG
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPG 580
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 173/392 (44%), Gaps = 87/392 (22%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNH---IPINAQSPYMYNNVLSMYGRCGSIRDA 67
+ ++ CAS+ ++K R+I +LV+ + +P+N N+++ MYG+C A
Sbjct: 72 SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVN-------NSLIDMYGKCSDTLSA 124
Query: 68 RQVFD---------------------------------EIPKRSLVSYNALIAAYSRDHD 94
+VF E+PKR ++N +I+
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISG------ 178
Query: 95 HAHL-----TFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLM-GSLLHAQVIKYGSSE 148
HAH L +M +P+ TF+SL A S ++ G ++HA ++K G S
Sbjct: 179 HAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSS 238
Query: 149 DTCVQTSLLGMYSNCGDFESAKR-------------------------------IFGLIG 177
+ S+L Y+ G + A R +F L
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP 298
Query: 178 DKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKV 237
+K+ V W ++I G +N ++ L F M+ SGV+ F+Y +L+ACS + GK+
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKM 358
Query: 238 IHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGN 297
IH +I Q + NAL+++Y+KC D + A F I N DLVSWN+M+ + +G
Sbjct: 359 IHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGL 418
Query: 298 GEKAVDMFVALRRMSLLKPDEYTFAAIISATS 329
++A+ ++ + S +KPD TF +++ S
Sbjct: 419 ADQALKLYDNM-IASGIKPDNVTFIGLLTTCS 449
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 348/682 (51%), Gaps = 18/682 (2%)
Query: 22 ITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVS 81
+ L R Q+ A + +P ++ N ++S + + G + AR +FD +P R++V+
Sbjct: 55 VEDLLRRGQVSAARKVYDEMP--HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVT 112
Query: 82 YNALIAAYSRDHDHAHLTFRLIDQM--EFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHA 139
+ L+ Y+R+ H F+L QM C P+ +TFT+L + Q +HA
Sbjct: 113 WTILMGWYARN-SHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 140 QVIKYGSSEDTCVQTS--LLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKM 197
+K G + + S LL Y + A +F I +KD+V +N++I G K+
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 198 KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENAL 257
E + LF M SG P+ F++S +L A + +F G+ +HA + + D + N +
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI 291
Query: 258 LDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPD 317
LD YSK +F + D VS+N +I+ Y + E ++ F ++ M + +
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN 351
Query: 318 EYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFM 377
+ FA ++S + L + G+ LH + DS + VG +L++MY K E + +F
Sbjct: 352 -FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 378 LIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQ 437
+ ++ V WT +I G+ + G +KLF KM L+ D + L A A A L
Sbjct: 411 SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 438 GEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSH 497
G+ +H+ ++G+ + LVDMYAK G ++ A +F ++ + WNAL+ ++
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 498 YGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHK 556
G E A F ++E GL+PD ++ L +L+ACSH G VE+G + M + + P K
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 557 HYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLR 616
HY+CM+ LL R G EAE L+ E P+ I +W ++L+ C +N + +AAE++
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI-MWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 617 LDP-EDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGD 675
++ D ++ +SN+YAA G W+ V +++ M+ + K P SW+E + +HVFSS D
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 676 QSHP-------KIDDAQAELHR 690
Q+HP KI++ AE+ R
Sbjct: 710 QTHPNGDEIVRKINELTAEIER 731
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 210/480 (43%), Gaps = 38/480 (7%)
Query: 139 AQVIKYGSSEDTC------------------------------VQT-SLLGMYSNCGDFE 167
A++IK G DTC V T +++ + GD
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVS 96
Query: 168 SAKRIFGLIGDKDAVAWNSIILGNF-KNDKMKEGLSLFGAMVGSG--VNPTQFSYSMLLN 224
SA+ +F + D+ V W +I++G + +N E LF M S P +++ LL
Sbjct: 97 SARDLFDAMPDRTVVTW-TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 225 ACSRMGNFVCGKVIHARVII--SNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDL 282
C+ +HA + +T L + N LL Y + A +F I D
Sbjct: 156 GCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDS 215
Query: 283 VSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHA 342
V++N++I GY ++G +++ +F+ +R+ S +P ++TF+ ++ A L A G+ LHA
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQ-SGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 343 LVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGEC 402
L + TG+ VG +L+ Y K+ + +F + E D V + +I +S+ E
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 403 AIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVD 462
++ F +M G NF + LS A+L+ L+ G +H QA + V SLVD
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 463 MYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEIT 522
MYAK AE IF + W AL+ GY G+ +F + LR D+ T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 523 FLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESP 582
F ++L A + + GK L + + S +V + ++ G + +A + E P
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 121/221 (54%), Gaps = 9/221 (4%)
Query: 12 IATLIQICASITSLKRARQIH--ALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
AT++ I A+++SL+ RQ+H AL+ T + I ++ N+++ MY +C +A
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSI------LHVGNSLVDMYAKCEMFEEAEL 407
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
+F +P+R+ VS+ ALI+ Y + H +L +M LR + TF ++ +A +
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHG-AGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
L+G LHA +I+ G+ E+ + L+ MY+ CG + A ++F + D++AV+WN++I
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMG 230
+ N + + F M+ SG+ P S +L ACS G
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 173/407 (42%), Gaps = 38/407 (9%)
Query: 230 GNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMI 289
F+ + + AR+I + D N +++ + A V+ + + + VS N+MI
Sbjct: 27 ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 290 AGYMENGNGEKAVDMFVAL--------------------------------RRMSLLKPD 317
+G+++ G+ A D+F A+ R S PD
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 318 EYTFAAIISA-TSALPASAYGKPLHALVIKTGYDSSVF--VGTTLLNMYFKNGDAESPQK 374
TF ++ A+P +A G+ +HA +K G+D++ F V LL Y + +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 375 VFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAI 434
+F I EKD V + +I G+ + G +I LF KM + G + +F SG L A L
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 435 LKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGG 494
G+ +H+ + TG + SV ++D Y+K+ + +F ++ D +N ++
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 495 YSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPG 554
YS E + F + G F ++LS ++ ++ G+ L Q +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 555 HKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAK 601
+ +V + ++ + +EAE LI +S + W L+S V K
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAE-LIFKSLPQRTTVS-WTALISGYVQK 430
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
AT+++ AS SL +Q+HA ++ + N ++ + + ++ MY +CGSI+DA QV
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRSG----NLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
F+E+P R+ VS+NALI+A++ D+ +M L+P+ ++ + A S
Sbjct: 510 FEEMPDRNAVSWNALISAHA-DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS---- 564
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
H ++ G+ F++ I+G+ K A +LG
Sbjct: 565 -------HCGFVEQGTEY-----------------FQAMSPIYGITPKKKHYACMLDLLG 600
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNAC 226
+N + E L M P + +S +LNAC
Sbjct: 601 --RNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 631
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/691 (30%), Positives = 362/691 (52%), Gaps = 19/691 (2%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
++ TL + C T+L+ A+ +HA ++ + I Q+ + ++++Y G++ AR
Sbjct: 56 DVHTLFRYC---TNLQSAKCLHARLVVSKQI----QNVCISAKLVNLYCYLGNVALARHT 108
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
FD I R + ++N +I+ Y R + + + M L P+ TF S+ +A + D
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
G+ +H +K+G D V SL+ +YS +A+ +F + +D +WN++I G
Sbjct: 169 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 191 NFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVD 250
++ KE L+L + + LL+AC+ G+F G IH+ I + +
Sbjct: 226 YCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 251 LPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRR 310
L + N L+D+Y++ + VF R+ DL+SWNS+I Y N +A+ +F +R
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR- 340
Query: 311 MSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYD-SSVFVGTTLLNMYFKNGDA 369
+S ++PD T ++ S S L + + ++ G+ + +G ++ MY K G
Sbjct: 341 LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREG-LKCDNFALSGALSA 428
+S + VF + D++ W +I G+++ G AI+++ M EG + + L A
Sbjct: 401 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 460
Query: 429 CADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCW 488
C+ L+QG +H + K G +++ V SL DMY K G L A S+F Q+ + W
Sbjct: 461 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520
Query: 489 NALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMK- 547
N L+ + +G E+A M+F+ +L+ G++PD ITF++LLSACSHSGLV+ G+ + M+
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 548 EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMV 607
++ + P KHY CMV + RAG L+ A I +S + +W LLS C N +
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETALKFI-KSMSLQPDASIWGALLSACRVHGNVDLG 639
Query: 608 IQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNN 667
A+E + ++PE H+LLSN+YA+ G+W+ V ++R G L K PG S +E N
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Query: 668 VHVFSSGDQSHPKIDDAQAELHRLRGNMRKL 698
V VF +G+Q+HP ++ EL L+ ++ +
Sbjct: 700 VEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 257/523 (49%), Gaps = 19/523 (3%)
Query: 10 RNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQ 69
R ++++ C ++ +IH L L + Y+ +++ +Y R ++ +AR
Sbjct: 154 RTFPSVLKACRTVID---GNKIHCLALKFGFM----WDVYVAASLIHLYSRYKAVGNARI 206
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
+FDE+P R + S+NA+I+ Y + +A L + + + +T SL A +
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQS-GNAKEALTLSNGLR----AMDSVTVVSLLSACTEAG 261
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
D G +H+ IK+G + V L+ +Y+ G +++F + +D ++WNSII
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
N++ +SLF M S + P + L + S++G+ + + + +
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 250 -DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL 308
D+ + NA++ MY+K +A +VF + N D++SWN++I+GY +NG +A++M+ +
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 309 RRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGD 368
+ ++ T+ +++ A S A G LH ++K G VFV T+L +MY K G
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 369 AESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSA 428
E +F I + V W +I H G GE A+ LF +M EG+K D+ LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 429 CADLAILKQGEMIHSQAEKTGHGVEMSV--CGSLVDMYAKNGDLRAA-ESIFSQVLHPDL 485
C+ ++ +G+ + +T +G+ S+ G +VDMY + G L A + I S L PD
Sbjct: 562 CSHSGLVDEGQWCF-EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 486 KCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
W ALL +G + + E + E + P+ + + LLS
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFE--VEPEHVGYHVLLS 661
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 354/666 (53%), Gaps = 42/666 (6%)
Query: 63 SIRDARQVFDEIPKR-SLVSYNALIAAYSRDH--DHAHLTFRLIDQMEFECLRPNGLTFT 119
S+ A++VF+ + YN+LI Y+ + A L F +M + P+ TF
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL---RMMNSGISPDKYTFP 138
Query: 120 SLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDK 179
A + + G +H ++K G ++D VQ SL+ Y+ CG+ +SA+++F + ++
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 180 DAVAWNSIILGNFKNDKMKEGLSLFGAMV-GSGVNPTQFSYSMLLNACSRMGNFVCGKVI 238
+ V+W S+I G + D K+ + LF MV V P + +++AC+++ + G+ +
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 239 HARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNG 298
+A + S +V+ + +AL+DMY KC+ A +F +L N+M + Y+ G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 299 EKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTT 358
+A+ +F L S ++PD + + IS+ S L +GK H V++ G++S +
Sbjct: 319 REALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 359 LLNMYFK-------------------------------NGDAESPQKVFMLIAEKDIVLW 387
L++MY K NG+ ++ + F + EK+IV W
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 388 TEMIIGHSRMGDGECAIKLFCKM-CREGLKCDNFALSGALSACADLAILKQGEMIHSQAE 446
+I G + E AI++FC M +EG+ D + SAC L L + I+ E
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 447 KTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFM 506
K G +++ + +LVDM+++ GD +A SIF+ + + D+ W A +G + G AE A
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 507 VFEVILEHGLRPDEITFLSLLSACSHSGLVERGK-ILWNQMKEHSLIPGHKHYSCMVSLL 565
+F+ ++E GL+PD + F+ L+ACSH GLV++GK I ++ +K H + P HY CMV LL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 566 SRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTH 625
RAGLL+EA LI + P + +W +LL+ C + N M AAE++ L PE ++
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 626 ILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQ 685
+LLSN+YA+ GRW+ +AK+R MK L K PG S I+ + H F+SGD+SHP++ + +
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 686 AELHRL 691
A L +
Sbjct: 737 AMLDEV 742
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 271/572 (47%), Gaps = 51/572 (8%)
Query: 16 IQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIP 75
+ CA + QIH L++ + A+ ++ N+++ Y CG + AR+VFDE+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGY----AKDLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 76 KRSLVSYNALIAAYSRD---HDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL 132
+R++VS+ ++I Y+R D L FR++ E + PN +T + A + LED
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLE 253
Query: 133 MGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNF 192
G ++A + G + + ++L+ MY C + AKR+F G + N++
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 193 KNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLP 252
+ +E L +F M+ SGV P + S +++CS++ N + GK H V+ + +
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 253 LENALLDMYSKCSDTQTAFSVFTRIENP-------------------------------D 281
+ NAL+DMY KC TAF +F R+ N +
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 282 LVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLH 341
+VSWN++I+G ++ E+A+++F +++ + D T +I SA L A K ++
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 342 ALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGE 401
+ K G V +GTTL++M+ + GD ES +F + +D+ WT I + G+ E
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 402 CAIKLFCKMCREGLKCDNFALSGALSACADLAILKQG-EMIHSQAEKTGHGVEMSVCGSL 460
AI+LF M +GLK D A GAL+AC+ +++QG E+ +S + G E G +
Sbjct: 554 RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCM 613
Query: 461 VDMYAKNGDLRAAESIFSQV-LHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPD 519
VD+ + G L A + + + P+ WN+LL G E A E I L P+
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI--QVLAPE 671
Query: 520 EITFLSLLSACSHSGLVERGKILWNQMKEHSL 551
LLS S G+ WN M + L
Sbjct: 672 RTGSYVLLSNVYASA----GR--WNDMAKVRL 697
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 212/470 (45%), Gaps = 36/470 (7%)
Query: 136 LLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFES---AKRIF-GLIGDKDAVAWNSIILGN 191
+ H + K G D T L+ G ES AK +F +NS+I G
Sbjct: 50 MFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGY 109
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+ E + LF M+ SG++P ++++ L+AC++ G IH ++ DL
Sbjct: 110 ASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL 169
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
++N+L+ Y++C + +A VF + ++VSW SMI GY + AVD+F + R
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 312 SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAES 371
+ P+ T +ISA + L G+ ++A + +G + + + + L++MY K +
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 372 PQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACAD 431
+++F ++ L M + R G A+ +F M G++ D ++ A+S+C+
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 432 LAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNAL 491
L + G+ H + G ++C +L+DMY K A IF ++ + + WN++
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 492 LGGYSHYGMAEEAFMVFEVILE--------------------------------HGLRPD 519
+ GY G + A+ FE + E G+ D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 520 EITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAG 569
+T +S+ SAC H G ++ K ++ ++++ + + + +V + SR G
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 329 bits (843), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/670 (29%), Positives = 356/670 (53%), Gaps = 15/670 (2%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
+I+ CA ++ + +H LV+ T + + ++ N ++S YG G + DA Q+FD +
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLV----EDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 75 PKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFE----CLRPNGLTFTSLAQAVSLLED 130
P+R+LVS+N++I +S D+ + +F L+ +M E P+ T ++ + +
Sbjct: 249 PERNLVSWNSMIRVFS-DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 131 QLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILG 190
+G +H +K ++ + +L+ MYS CG +A+ IF + +K+ V+WN+++ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV-G 366
Query: 191 NFKNDKMKEG-LSLFGAMVGSGVNPTQFSYSML--LNACSRMGNFVCGKVIHARVIISNT 247
F + G + M+ G + ++L + C K +H +
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
+ + NA + Y+KC A VF I + + SWN++I G+ ++ + ++D +
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 308 LRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNG 367
++ LL PD +T +++SA S L + GK +H +I+ + +FV ++L++Y G
Sbjct: 487 MKISGLL-PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 368 DAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALS 427
+ + Q +F + +K +V W +I G+ + G + A+ +F +M G++ ++
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 428 ACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKC 487
AC+ L L+ G H+ A K + + SL+DMYAKNG + + +F+ +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 488 WNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMK 547
WNA++ GY +G+A+EA +FE + G PD++TFL +L+AC+HSGL+ G +QMK
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 548 -EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRM 606
L P KHY+C++ +L RAG LD+A ++AE E + +W++LLS+C +N M
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 607 VIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKN 666
+ A ++ L+PE ++LLSNLYA G+W+ V K+R++M L K+ G SWIE
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 667 NVHVFSSGDQ 676
V F G++
Sbjct: 846 KVFSFVVGER 855
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 250/531 (47%), Gaps = 20/531 (3%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+ L+Q ++ R+IH LV + + + +++MY CGS D+R VF
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRL---RNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQ 131
D + ++L +NA+I++YSR+ + + I+ + L P+ T+ + +A + + D
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 132 LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
+G +H V+K G ED V +L+ Y G A ++F ++ +++ V+WNS+I
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 192 FKNDKMKEGLSLFGAMV---GSGV-NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNT 247
N +E L G M+ G G P + +L C+R GK +H +
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
+L L NAL+DMYSKC A +F N ++VSWN+M+ G+ G+ D+
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV--- 380
Query: 308 LRRM----SLLKPDEYTFAAIISA---TSALPASAYGKPLHALVIKTGYDSSVFVGTTLL 360
LR+M +K DE T + S LP+ K LH +K + + V +
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---KELHCYSLKQEFVYNELVANAFV 437
Query: 361 NMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNF 420
Y K G Q+VF I K + W +I GH++ D ++ +M GL D+F
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 421 ALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQV 480
+ LSAC+ L L+ G+ +H + ++ V S++ +Y G+L +++F +
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 481 LHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACS 531
L WN ++ GY G + A VF ++ +G++ I+ + + ACS
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 192/422 (45%), Gaps = 19/422 (4%)
Query: 221 MLLNACSRMGNFVCGKVIHARVIISNTQV--DLPLENALLDMYSKCSDTQTAFSVFTRIE 278
+LL A + + G+ IH +++ +T++ D L ++ MY+ C + VF +
Sbjct: 89 LLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 279 NPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGK 338
+ +L WN++I+ Y N ++ ++ F+ + + L PD +T+ +I A + + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 339 PLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMG 398
+H LV+KTG VFVG L++ Y +G ++F ++ E+++V W MI S G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 399 DGECAIKLFCKMCRE----GLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEM 454
E + L +M E D L L CA + G+ +H A K E+
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 455 SVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEH 514
+ +L+DMY+K G + A+ IF + ++ WN ++GG+S G F V +L
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 515 G--LRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLD 572
G ++ DE+T L+ + C H + K L + + + V+ ++ G L
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 573 EAENLIAESPYSEIR---IELWRTLLSTCVAKRNSRMVIQAAEQ--VLRLDPEDGTTHIL 627
A+ + + IR + W L+ + R+ + A Q + L P+ T L
Sbjct: 448 YAQRV-----FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 628 LS 629
LS
Sbjct: 503 LS 504
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 328 bits (842), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 348/656 (53%), Gaps = 18/656 (2%)
Query: 52 NNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECL 111
++L MYG+ G++ DA +VFD +P R LV+++ L+++ ++ R+ M + +
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS-CLENGEVVKALRMFKCMVDDGV 198
Query: 112 RPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKR 171
P+ +T S+ + + L + +H Q+ + D + SLL MYS CGD S++R
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 172 IFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGN 231
IF I K+AV+W ++I + + ++ L F M+ SG+ P + +L++C +G
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 232 FVCGKVIHARVIISNTQVDLPLEN---ALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSM 288
GK +H + ++D E+ AL+++Y++C +V + + ++V+WNS+
Sbjct: 319 IREGKSVHGFAV--RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSL 376
Query: 289 IAGYMENGNGEKAVDMFVALRRM--SLLKPDEYTFAAIISATSALPASAYGKPLHALVIK 346
I+ Y G +A+ +F R+M +KPD +T A+ ISA GK +H VI+
Sbjct: 377 ISLYAHRGMVIQALGLF---RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 347 TGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKL 406
T S FV +L++MY K+G +S VF I + +V W M+ G S+ G+ AI L
Sbjct: 434 TDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 407 FCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAK 466
F M L+ + + AC+ + L++G+ +H + +G ++ +L+DMYAK
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAK 551
Query: 467 NGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSL 526
GDL AAE++F + + W++++ Y +G A F ++E G +P+E+ F+++
Sbjct: 552 CGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNV 611
Query: 527 LSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEI 586
LSAC HSG VE GK +N MK + P +H++C + LLSR+G L EA I E P+
Sbjct: 612 LSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA- 670
Query: 587 RIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRR 646
+W +L++ C + ++ + + +D + LLSN+YA G W+ ++R
Sbjct: 671 DASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRS 730
Query: 647 KMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKLVTDE 702
MK S L K PG S IE V F +G+++ + D E++R GN++ L +E
Sbjct: 731 AMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD----EIYRFLGNLQNLTNEE 782
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/566 (27%), Positives = 291/566 (51%), Gaps = 21/566 (3%)
Query: 21 SITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLV 80
S +SL+ Q+HA +L T + + P ++ Y GS +R VF+ P
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRL---RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 81 SYNALIAAYSRDH--DHA-HLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL-MGSL 136
Y LI H D A L RL+ E + + F S+ +A + + L +G
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVS----ETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 137 LHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDK 196
+H ++IK G +D ++TSLL MY G+ A+++F + +D VAW++++ +N +
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 197 MKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENA 256
+ + L +F MV GV P + ++ C+ +G + +H ++ +D L N+
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 257 LLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKP 316
LL MYSKC D ++ +F +I + VSW +MI+ Y EKA+ F + + S ++P
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEP 301
Query: 317 DEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSV-FVGTTLLNMYFKNGDAESPQKV 375
+ T +++S+ + GK +H ++ D + + L+ +Y + G + V
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 376 FMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAIL 435
++++++IV W +I ++ G A+ LF +M + +K D F L+ ++SAC + ++
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 436 KQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGY 495
G+ IH +T E V SL+DMY+K+G + +A ++F+Q+ H + WN++L G+
Sbjct: 422 PLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 496 SHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGH 555
S G + EA +F+ + L +E+TFL+++ ACS G +E+GK + +++ +I G
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL----IISGL 536
Query: 556 KHY---SCMVSLLSRAGLLDEAENLI 578
K + ++ + ++ G L+ AE +
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVF 562
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 238 IHARVIISNTQVDLPLE-NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENG 296
+HA ++++ PL L++ Y+ ++ VF PD + +I +
Sbjct: 20 LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCH 79
Query: 297 NGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPAS-AYGKPLHALVIKTGYDSSVFV 355
+ A+D++ L + + ++ F +++ A + + G +H +IK G D +
Sbjct: 80 LLDAAIDLYHRLVSETT-QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 356 GTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGL 415
T+LL MY + G+ +KVF + +D+V W+ ++ G+ A+++F M +G+
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 416 KCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAES 475
+ D + + CA+L L+ +H Q + ++ ++C SL+ MY+K GDL ++E
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 476 IFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGL 535
IF ++ + W A++ Y+ +E+A F +++ G+ P+ +T S+LS+C GL
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 536 VERGKILWNQMKEHSLIPGHKHYS-CMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTL 594
+ GK + L P ++ S +V L + G L + E ++ S+ I W +L
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL--RVVSDRNIVAWNSL 376
Query: 595 LSTCVAKRNSRMVIQA 610
+S A R MVIQA
Sbjct: 377 ISL-YAHRG--MVIQA 389
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 226/755 (29%), Positives = 368/755 (48%), Gaps = 79/755 (10%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
++Q C L +QIHA +L A++ Y+ ++ Y +C ++ A +F ++
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDF--YARNEYIETKLVIFYAKCDALEIAEVLFSKL 133
Query: 75 PKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMG 134
R++ S+ A+I R ++ +E E P+ ++ +A L+ G
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF-PDNFVVPNVCKACGALKWSRFG 192
Query: 135 SLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKN 194
+H V+K G + V +SL MY CG + A ++F I D++AVAWN++++G +N
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 195 DKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLE 254
K +E + LF M GV PT+ + S L+A + MG GK HA I++ ++D L
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 255 NALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLL 314
+LL+ Y K + A VF R+ D+V+WN +I+GY++ G E A+ M L R+ L
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKL 371
Query: 315 KPDEYTFAAIISATSALPASAYGKPLHALVI---------------------------KT 347
K D T A ++SA + GK + I K
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 348 GYDSSV----FVGTTLLNMY-----------------------------------FKNGD 368
+DS+V + TLL Y +NG
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 369 AESPQKVFMLIAEKDIVL----WTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSG 424
+ + +F+ + I+ WT M+ G + G E AI KM GL+ + F+++
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 425 ALSACADLAILKQGEMIHSQAEKT-GHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP 483
ALSACA LA L G IH + H +S+ SLVDMYAK GD+ AE +F L+
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 484 DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERG-KIL 542
+L NA++ Y+ YG +EA ++ + GL+PD IT ++LSAC+H+G + + +I
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 543 WNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKR 602
+ + + S+ P +HY MV LL+ AG ++A LI E P+ + ++L+++C +R
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKP-DARMIQSLVASCNKQR 730
Query: 603 NSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWI 662
+ +V + ++L +PE+ ++ +SN YA G WD V KMR MK L K+PG SWI
Sbjct: 731 KTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Query: 663 E--AKNNVHVFSSGDQSHPKIDDAQAELHRLRGNM 695
+ + VHVF + D++H +I++ Q L L +M
Sbjct: 791 QITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 242/476 (50%), Gaps = 5/476 (1%)
Query: 102 LIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGS--SEDTCVQTSLLGM 159
L+ +M+F LR + + Q D G +HA+++K G + + ++T L+
Sbjct: 57 LVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIF 116
Query: 160 YSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSY 219
Y+ C E A+ +F + ++ +W +II + + L F M+ + + P F
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 220 SMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIEN 279
+ AC + G+ +H V+ S + + + ++L DMY KC A VF I +
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 280 PDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKP 339
+ V+WN+++ GY++NG E+A+ +F +R+ + +P T + +SA++ + GK
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV-EPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 340 LHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGD 399
HA+ I G + +GT+LLN Y K G E + VF + EKD+V W +I G+ + G
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGL 355
Query: 400 GECAIKLFCKMCR-EGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCG 458
E AI + C++ R E LK D L+ +SA A LK G+ + + ++ +
Sbjct: 356 VEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 459 SLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRP 518
+++DMYAK G + A+ +F + DL WN LL Y+ G++ EA +F + G+ P
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 519 DEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEA 574
+ IT+ ++ + +G V+ K ++ QM+ +IP ++ M++ + + G +EA
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 206/406 (50%), Gaps = 5/406 (1%)
Query: 193 KNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNT--QVD 250
KN ++KE LSL M + Y +L C + GK IHAR++ + +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 251 LPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRR 310
+E L+ Y+KC + A +F+++ ++ SW ++I G E A+ FV +
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 311 MSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAE 370
+ PD + + A AL S +G+ +H V+K+G + VFV ++L +MY K G +
Sbjct: 167 NEIF-PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLD 225
Query: 371 SPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACA 430
KVF I +++ V W +++G+ + G E AI+LF M ++G++ +S LSA A
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 431 DLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNA 490
++ +++G+ H+ A G ++ + SL++ Y K G + AE +F ++ D+ WN
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 491 LLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHS 550
++ GY G+ E+A + +++ L+ D +T +L+SA + + ++ GK + HS
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 551 LIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLS 596
S ++ + ++ G + +A+ + + E + LW TLL+
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDST--VEKDLILWNTLLA 449
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 40/321 (12%)
Query: 9 CRNIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDAR 68
C +ATL+ A +LK +++ + + + + V+ MY +CGSI DA+
Sbjct: 375 CVTLATLMSAAARTENLKLGKEVQCYCIRHSF----ESDIVLASTVMDMYAKCGSIVDAK 430
Query: 69 QVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
+VFD ++ L+ +N L+AAY+ RL M+ E + PN +T+ +
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGE-ALRLFYGMQLEGVPPNVITWNLI------- 482
Query: 129 EDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
++ L + QV ++D +Q G+ N ++W +++
Sbjct: 483 ---ILSLLRNGQV---DEAKDMFLQMQSSGIIPNL------------------ISWTTMM 518
Query: 189 LGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
G +N +E + M SG+ P FS ++ L+AC+ + + G+ IH II N Q
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG-YIIRNLQ 577
Query: 249 VD--LPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFV 306
+ +E +L+DMY+KC D A VF +L N+MI+ Y GN ++A+ ++
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYR 637
Query: 307 ALRRMSLLKPDEYTFAAIISA 327
+L + LKPD T ++SA
Sbjct: 638 SLEGVG-LKPDNITITNVLSA 657
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 207/682 (30%), Positives = 352/682 (51%), Gaps = 33/682 (4%)
Query: 20 ASITSLKRARQIHALVLTTNHIPINAQSPYM-YNNVLSMYGRCGSIRDARQVFDEIPKRS 78
A+ SLKRA Q T + S +N +S Y R G +A +VF +P+ S
Sbjct: 35 ANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS 94
Query: 79 LVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLH 138
VSYN +I+ Y R+ + L +L D+M L + + +L + + + ++
Sbjct: 95 SVSYNGMISGYLRNGEF-ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM- 152
Query: 139 AQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMK 198
D C ++L Y+ G + A+ +F + +K+ V+WN+++ +N KM+
Sbjct: 153 -------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME 205
Query: 199 EGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGK-VIHARVIISNTQV-DLPLENA 256
E LF S N S++ LL G FV K ++ AR + V D+ N
Sbjct: 206 EACMLFK----SRENWALVSWNCLL------GGFVKKKKIVEARQFFDSMNVRDVVSWNT 255
Query: 257 LLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKP 316
++ Y++ A +F D+ +W +M++GY++N E+A ++F + +
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD-----KMPER 310
Query: 317 DEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVF 376
+E ++ A+++ K L ++ +V T++ Y + G + +F
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 377 MLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILK 436
+ ++D V W MI G+S+ G A++LF +M REG + + + S ALS CAD+ L+
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 437 QGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYS 496
G+ +H + K G+ V +L+ MY K G + A +F ++ D+ WN ++ GYS
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 497 HYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGK-ILWNQMKEHSLIPGH 555
+G E A FE + GL+PD+ T +++LSACSH+GLV++G+ + +++ ++P
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 556 KHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVL 615
+HY+CMV LL RAGLL++A NL+ P+ E +W TLL N+ + AA+++
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPF-EPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 616 RLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGD 675
++PE+ ++LLSNLYA++GRW V K+R +M+ + K PG SWIE +N H FS GD
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 676 QSHPKIDDAQAELHRLRGNMRK 697
+ HP+ D+ A L L M+K
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKK 687
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 308/581 (53%), Gaps = 58/581 (9%)
Query: 155 SLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGV-- 212
+LL YS G + F + D+D V WN +I EG SL G +VG+ V
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLI----------EGYSLSG-LVGAAVKA 125
Query: 213 ----------NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYS 262
N T+ + +L S G+ GK IH +VI + L + + LL MY+
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 263 K-------------------------------CSDTQTAFSVFTRIENPDLVSWNSMIAG 291
C + A +F +E D VSW +MI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKG 244
Query: 292 YMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDS 351
+NG ++A++ F ++ + LK D+Y F +++ A L A GK +HA +I+T +
Sbjct: 245 LAQNGLAKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 352 SVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMC 411
++VG+ L++MY K + VF + +K++V WT M++G+ + G E A+K+F M
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 412 REGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLR 471
R G+ D++ L A+SACA+++ L++G H +A +G ++V SLV +Y K GD+
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 472 AAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACS 531
+ +F+++ D W A++ Y+ +G A E +F+ +++HGL+PD +T ++SACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 532 HSGLVERGKILWNQM-KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIEL 590
+GLVE+G+ + M E+ ++P HYSCM+ L SR+G L+EA I P+ I
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG- 542
Query: 591 WRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKG 650
W TLLS C K N + AAE ++ LDP + LLS++YA+ G+WD VA++RR M+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 651 SMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRL 691
+ KEPG SWI+ K +H FS+ D+S P +D A+L L
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 177/637 (27%), Positives = 286/637 (44%), Gaps = 125/637 (19%)
Query: 16 IQICASITSLKRAR---QIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFD 72
I+ C + + ++R IH ++ P ++YNN++ Y S AR+VFD
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYP----ETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 73 EIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQME--FECLRP-NGLTFTSLAQAVSL-- 127
IP+ +L S+N L+ AYS+ LI +ME FE L +G+T+ L + SL
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAG--------LISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 128 ------------LED--------QLM--------------GSLLHAQVIKYGSSEDTCVQ 153
+ D LM G +H QVIK G V
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 154 TSLLGMYSNCGDFESAKRIF---------------------GLIGD---------KDAVA 183
+ LL MY+N G AK++F G+I D KD+V+
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237
Query: 184 WNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVI 243
W ++I G +N KE + F M G+ Q+ + +L AC +G GK IHA +I
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 244 ISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVD 303
+N Q + + +AL+DMY KC A +VF R++ ++VSW +M+ GY + G E+AV
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 304 MFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMY 363
+F+ ++R S + PD YT ISA + + + G H I +G V V +L+ +Y
Sbjct: 358 IFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 364 FKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALS 423
K GD + ++F + +D V WT M+ +++ G I+LF KM + GLK D L+
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 424 GALSACADLAILKQGEMIHSQAEKTGHGVEMSV--CGSLVDMYAKNGDLRAAESIFSQVL 481
G +SAC+ ++++G+ + + + +G+ S+ ++D+++++G L A + +
Sbjct: 477 GVISACSRAGLVEKGQR-YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 482 HPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKI 541
P PD I + +LLSAC + G +E GK
Sbjct: 536 FP----------------------------------PDAIGWTTLLSACRNKGNLEIGK- 560
Query: 542 LWNQMKEHSLIPGHKH-YSCMVSLLSRAGLLDEAENL 577
W L P H Y+ + S+ + G D L
Sbjct: 561 -WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 214/473 (45%), Gaps = 52/473 (10%)
Query: 214 PTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSV 273
P F Y+ +++A + M + + + R+ Q +L N LL YSK S
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 274 FTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPA 333
F ++ + D V+WN +I GY +G AV + + R T ++ +S+
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 334 SAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFM---------------- 377
+ GK +H VIK G++S + VG+ LL MY G +KVF
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 378 LIA--------------EKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALS 423
L+A EKD V W MI G ++ G + AI+ F +M +GLK D +
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 424 GALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHP 483
L AC L + +G+ IH+ +T + V +L+DMY K L A+++F ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 484 DLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILW 543
++ W A++ GY G AEEA +F + G+ PD T +SAC++ +E G
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG---- 390
Query: 544 NQMKEHSLIPGHKHY----SCMVSLLSRAGLLDEAENLIAESPYSEIRIEL-WRTLLSTC 598
+Q ++ G HY + +V+L + G +D++ L E +R + W ++S
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE---MNVRDAVSWTAMVSAY 447
Query: 599 VAKRNSRMVIQAAEQVLR--LDPEDGTTHILLSNLYAATGRWDCVAKMRRKMK 649
+ IQ +++++ L P DG T L+ + +A R V K +R K
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKP-DGVT---LTGVISACSRAGLVEKGQRYFK 496
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 150/325 (46%), Gaps = 15/325 (4%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTN---HIPINAQSPYMYNNVLSMYGRCGSIRDAR 68
+++ C + ++ +QIHA ++ TN HI Y+ + ++ MY +C + A+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHI-------YVGSALIDMYCKCKCLHYAK 325
Query: 69 QVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
VFD + ++++VS+ A++ Y + A ++ M+ + P+ T A + +
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQT-GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 129 EDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
GS H + I G V SL+ +Y CGD + + R+F + +DAV+W +++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 189 LGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQ 248
+ + E + LF MV G+ P + + +++ACSR G G+ + +++ S
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR-YFKLMTSEYG 503
Query: 249 V--DLPLENALLDMYSKCSDTQTAFSVFTRIE-NPDLVSWNSMIAGYMENGNGEKAVDMF 305
+ + + ++D++S+ + A + PD + W ++++ GN E
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 306 VALRRMSLLKPDEYTFAAIISATSA 330
+L + P YT + I A+
Sbjct: 564 ESLIELDPHHPAGYTLLSSIYASKG 588
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 37/278 (13%)
Query: 334 SAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIG 393
S Y K +H +I+ F+ +++ Y + ++VF I + ++ W +++
Sbjct: 22 SRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 394 HSRMGDGECAIKLFCKMC-REGLK----CDNFALSGALSACAD----------------- 431
+S+ G F K+ R+G+ + ++LSG + A
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 432 -LAILK---------QGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVL 481
+ +LK G+ IH Q K G + V L+ MYA G + A+ +F +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 482 HPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKI 541
+ +N+L+GG GM E+A +F G+ D +++ +++ + +GL +
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 542 LWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIA 579
+ +MK L + ++ G ++E + + A
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 277/478 (57%), Gaps = 3/478 (0%)
Query: 222 LLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPD 281
+L C+R G + K H ++I + + D+ L N L++ YSKC + A VF +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 282 LVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLH 341
LVSWN+MI Y N +A+D+F+ +R K E+T ++++SA + K LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVLSACGVNCDALECKKLH 185
Query: 342 ALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGE 401
L +KT D +++VGT LL++Y K G + +VF + +K V W+ M+ G+ + + E
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 402 CAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLV 461
A+ L+ + R L+ + F LS + AC++LA L +G+ +H+ K+G G + V S V
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 462 DMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEI 521
DMYAK G LR + IFS+V +L+ WN ++ G++ + +E ++FE + + G+ P+E+
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 522 TFLSLLSACSHSGLVERGKILWNQMK-EHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAE 580
TF SLLS C H+GLVE G+ + M+ + L P HYSCMV +L RAGLL EA LI
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 581 SPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDC 640
P+ +W +LL++C +N + AAE++ L+PE+ H+LLSN+YAA +W+
Sbjct: 426 IPFDPT-ASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 641 VAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRKL 698
+AK R+ ++ + K G SWI+ K+ VH FS G+ HP+I + + L L RK
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKF 542
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 179/342 (52%), Gaps = 10/342 (2%)
Query: 10 RNIA-TLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVL-SMYGRCGSIRDA 67
RN+ ++Q+CA ++ A+ H + I I+ + NVL + Y +CG + A
Sbjct: 61 RNLVHEILQLCARNGAVMEAKACHGKI-----IRIDLEGDVTLLNVLINAYSKCGFVELA 115
Query: 68 RQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSL 127
RQVFD + +RSLVS+N +I Y+R+ + + +M E + + T +S+ A +
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESE-ALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 128 LEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSI 187
D L LH +K + V T+LL +Y+ CG + A ++F + DK +V W+S+
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 188 ILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNT 247
+ G +N +E L L+ + QF+ S ++ ACS + + GK +HA + S
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
++ + ++ +DMY+KC + ++ +F+ ++ +L WN++I+G+ ++ ++ + +F
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 308 LRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGY 349
+++ + P+E TF++++S G+ L ++T Y
Sbjct: 355 MQQDG-MHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTY 394
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 345/677 (50%), Gaps = 31/677 (4%)
Query: 25 LKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNA 84
LKR QIH T+ S N V+ MY + G +A +F+ + +VS+N
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVS----NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147
Query: 85 LIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKY 144
+++ + D + + +M+ + + T+++ E L+G L + V+K
Sbjct: 148 ILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 145 GSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMK-EGLSL 203
G D V S + MYS G F A+R+F + KD ++WNS++ G + E + +
Sbjct: 204 GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVI 263
Query: 204 FGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSK 263
F M+ GV S++ ++ C + + IH I + L + N L+ YSK
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSK 323
Query: 264 CSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAA 323
C + SVF ++ ++VSW +MI+ N + AV +F+ +R + P+E TF
Sbjct: 324 CGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMR-FDGVYPNEVTFVG 377
Query: 324 IISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKD 383
+I+A G +H L IKTG+ S VG + + +Y K E +K F I ++
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 384 IVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACA---DLAILKQGEM 440
I+ W MI G ++ G A+K+F E + + + L+A A D+++ KQG+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISV-KQGQR 495
Query: 441 IHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGM 500
H+ K G V +L+DMYAK G++ +E +F+++ + W +++ YS +G
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 501 AEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYS 559
E +F +++ + PD +TFLS+L+AC+ G+V++G ++N M E ++L P H+HYS
Sbjct: 556 FETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYS 615
Query: 560 CMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDP 619
CMV +L RAG L EAE L++E P + +++L +C N +M + AE + + P
Sbjct: 616 CMVDMLGRAGRLKEAEELMSEVPGGPGE-SMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 674
Query: 620 EDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKN-----NVHVFSSG 674
E +++ + N+YA WD A++R+ M+ + KE G SWI+ + + FSSG
Sbjct: 675 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 734
Query: 675 DQSHPKIDDAQAELHRL 691
D+SHPK D E++R+
Sbjct: 735 DKSHPKSD----EIYRM 747
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 16/320 (5%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVL-SMYGRCGSIRDARQ 69
+ ++I C T LK ARQIH L + + +S N+L S Y +CG + +
Sbjct: 278 SFTSVITTCCHETDLKLARQIHGLCIKRGY-----ESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 70 VFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLE 129
VF ++ +R++VS+ +I++ D L R F+ + PN +TF L AV E
Sbjct: 333 VFHQMSERNVVSWTTMISSNKDDAVSIFLNMR------FDGVYPNEVTFVGLINAVKCNE 386
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
G +H IK G + V S + +Y+ E AK+ F I ++ ++WN++I
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVC--GKVIHARVIISNT 247
G +N E L +F + + P ++++ +LNA + + G+ HA ++
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
+ +ALLDMY+K + + VF + + W S+I+ Y +G+ E +++F
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 308 LRRMSLLKPDEYTFAAIISA 327
+ + + + PD TF ++++A
Sbjct: 566 MIKEN-VAPDLVTFLSVLTA 584
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 346/715 (48%), Gaps = 60/715 (8%)
Query: 15 LIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEI 74
I C +I+ +K IH +L+ + +N S +++S Y G + A +
Sbjct: 34 FIHKCKTISQVK---LIHQKLLSFGILTLNLTS-----HLISTYISVGCLSHAVSLLRRF 85
Query: 75 PKR--SLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQL 132
P + +N+LI +Y D+ A+ L M P+ TF + +A +
Sbjct: 86 PPSDAGVYHWNSLIRSYG-DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 133 MGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNF 192
G HA + G + V +L+ MYS C A+++F + D V+WNSII
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 193 KNDKMKEGLSLFGAMVGS-GVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
K K K L +F M G P + +L C+ +G GK +H + S ++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVAL--- 308
+ N L+DMY+KC A +VF+ + D+VSWN+M+AGY + G E AV +F +
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 309 -----------------------------RRM--SLLKPDEYTFAAIISATSALPASAYG 337
R+M S +KP+E T +++S +++ A +G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 338 KPLHALVIK-------TGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIA--EKDIVLWT 388
K +H IK G+ V L++MY K ++ + +F ++ E+D+V WT
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 389 EMIIGHSRMGDGECAIKLFCKMCREGLKC--DNFALSGALSACADLAILKQGEMIHSQAE 446
MI G+S+ GD A++L +M E + + F +S AL ACA LA L+ G+ IH+ A
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 447 KTG-HGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAF 505
+ + V + V L+DMYAK G + A +F ++ + W +L+ GY +G EEA
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 506 MVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYSCMVSL 564
+F+ + G + D +T L +L ACSHSG++++G +N+MK + PG +HY+C+V L
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 565 LSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTT 624
L RAG L+ A LI E P + +W LS C + AAE++ L +
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS 683
Query: 625 HILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHP 679
+ LLSNLYA GRW V ++R M+ + K PG SW+E F GD++HP
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHP 738
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
I+ + CAS+ +L+ +QIHA L NA ++ N ++ MY +CGSI DAR V
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQ---NAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
FD + ++ V++ +L+ Y H + + D+M + +G+T + A S
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGM-HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/700 (28%), Positives = 366/700 (52%), Gaps = 25/700 (3%)
Query: 13 ATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRD------ 66
++ ++ CA +LK + +H ++ + S ++N++++MY C + D
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRC----LQNSSRVVHNSLMNMYVSCLNAPDCFEYDV 166
Query: 67 ARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVS 126
R+VFD + ++++V++N LI+ Y + +A + M E ++P+ ++F ++ AVS
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVS 225
Query: 127 LLEDQLMGSLLHAQVIKYGSS--EDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAW 184
+ ++ + ++K G +D V +S + MY+ GD ES++R+F +++ W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 185 NSIILGNFKNDKMKEGLSLFGAMVGSG-VNPTQFSYSMLLNACSRMGNFVCGKVIHARVI 243
N++I +ND + E + LF +GS + + +Y + +A S + G+ H V
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 244 ISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVD 303
+ ++ + + N+L+ MYS+C +F VF + D+VSWN+MI+ +++NG ++ +
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 304 MFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVG--TTLLN 361
+ +++ K D T A++SA S L GK HA +I+ G F G + L++
Sbjct: 406 LVYEMQKQGF-KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLID 461
Query: 362 MYFKNGDAESPQKVF--MLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDN 419
MY K+G QK+F AE+D W MI G+++ G E +F KM + ++ +
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 420 FALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQ 479
++ L AC+ + + G+ +H + + + V +LVDMY+K G ++ AE +FSQ
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 480 VLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERG 539
+ + ++ GY +GM E A +F + E G++PD ITF+++LSACS+SGL++ G
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Query: 540 KILWNQMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTC 598
++ +M+E +++ P +HY C+ +L R G ++EA + ELW +LL +C
Sbjct: 642 LKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 599 VAKRNSRMVIQAAEQVLRLDPEDGTT--HILLSNLYAATGRWDCVAKMRRKMKGSMLGKE 656
+ +E++ + D + +LLSN+YA +W V K+RR M+ L KE
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKE 761
Query: 657 PGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMR 696
G S IE V+ F S DQ HP + + L +MR
Sbjct: 762 VGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 269/553 (48%), Gaps = 19/553 (3%)
Query: 43 INAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAY-SRDHDHAHLTF- 100
+ Q+P + + LS + G+ + ARQ+FD IPK + V +N +I + + H L F
Sbjct: 35 LTPQTPSIRSR-LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 101 -RLIDQMEF-ECLRPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLG 158
R+ F C + T++S +A + ++ G +H +I+ + V SL+
Sbjct: 94 SRMKKTAPFTNC---DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 159 MY------SNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGV 212
MY +C +++ +++F + K+ VAWN++I K + E FG M+ V
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 213 NPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV--DLPLENALLDMYSKCSDTQTA 270
P+ S+ + A S + V + ++ + DL + ++ + MY++ D +++
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 271 FSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSA 330
VF ++ WN+MI Y++N +++++F+ + DE T+ SA SA
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 331 LPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEM 390
L G+ H V K + + + +L+ MY + G VF+ + E+D+V W M
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 391 IIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGH 450
I + G + + L +M ++G K D ++ LSA ++L + G+ H+ + G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 451 GVEMSVCGSLVDMYAKNGDLRAAESIF--SQVLHPDLKCWNALLGGYSHYGMAEEAFMVF 508
E + L+DMY+K+G +R ++ +F S D WN+++ GY+ G E+ F+VF
Sbjct: 451 QFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 509 EVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRA 568
+LE +RP+ +T S+L ACS G V+ GK L L S +V + S+A
Sbjct: 510 RKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKA 569
Query: 569 GLLDEAENLIAES 581
G + AE++ +++
Sbjct: 570 GAIKYAEDMFSQT 582
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 211/448 (47%), Gaps = 21/448 (4%)
Query: 164 GDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSG--VNPTQFSYSM 221
G+ + A+++F I V WN+II+G N+ E L + M + N ++YS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 222 LLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAF------SVFT 275
L AC+ N GK +H +I + N+L++MY C + F VF
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 276 RIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASA 335
+ ++V+WN++I+ Y++ G +A F + RM +KP +F + A S +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSISRSIK 231
Query: 336 YGKPLHALVIKTG--YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIG 393
+ L++K G Y +FV ++ ++MY + GD ES ++VF E++I +W MI
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 394 HSRMGDGEC---AIKLFCK-MCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTG 449
+ + +C +I+LF + + + + D A SA + L ++ G H K
Sbjct: 292 YVQ---NDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 450 HGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFE 509
+ + + SL+ MY++ G + + +F + D+ WN ++ + G+ +E M+
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 510 VILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSL-IPGHKHYSCMVSLLSRA 568
+ + G + D IT +LLSA S+ E GK + + G Y ++ + S++
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKS 466
Query: 569 GLLDEAENLIAESPYSEIRIELWRTLLS 596
GL+ ++ L S Y+E W +++S
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMIS 494
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 295/531 (55%), Gaps = 5/531 (0%)
Query: 163 CGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSML 222
CGD + A+++F + ++ V WNS+I K+ + KE + ++ M+ + V P +++ S +
Sbjct: 112 CGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSV 171
Query: 223 LNACSRMGNFVCGKVIHARVIISNTQV-DLPLENALLDMYSKCSDTQTAFSVFTRIENPD 281
A S + + H +I +V ++ + +AL+DMY K T+ A V R+E D
Sbjct: 172 FKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKD 231
Query: 282 LVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLH 341
+V ++I GY + G +AV F ++ + ++P+EYT+A+++ + L GK +H
Sbjct: 232 VVLITALIVGYSQKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 342 ALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGE 401
L++K+G++S++ T+LL MY + + +VF I + V WT +I G + G E
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 402 CAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLV 461
A+ F KM R+ +K ++F LS AL C++LA+ ++G IH K G + L+
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 462 DMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEI 521
D+Y K G A +F + D+ N ++ Y+ G EA +FE ++ GL+P+++
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 522 TFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAES 581
T LS+L AC++S LVE G L++ ++ ++ + HY+CMV LL RAG L+EAE L E
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 582 PYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCV 641
+ + LWRTLLS C R M + ++L ++P D T IL+SNLYA+TG+W+ V
Sbjct: 531 INPD--LVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 642 AKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQ-SHPKIDDAQAELHRL 691
+M+ KMK L K P +SW+E H F +GD SHP + L L
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 268/543 (49%), Gaps = 11/543 (2%)
Query: 11 NIATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQV 70
N + L++ C S+ + I A +L + P + + L +CG I ARQV
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEISGSKLVDASL----KCGDIDYARQV 121
Query: 71 FDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLED 130
FD + +R +V++N+LI AY H + + M + P+ T +S+ +A S L
Sbjct: 122 FDGMSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL 180
Query: 131 QLMGSLLHAQVIKYG-SSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
+ H + G + V ++L+ MY G AK + + +KD V ++I+
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
G + + E + F +M+ V P +++Y+ +L +C + + GK+IH ++ S +
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
L + +LL MY +CS + VF IE P+ VSW S+I+G ++NG E A+ F +
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
R S +KP+ +T ++ + S L G+ +H +V K G+D + G+ L+++Y K G +
Sbjct: 361 RDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSAC 429
+ + VF ++E D++ MI +++ G G A+ LF +M GL+ ++ + L AC
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC 479
Query: 430 ADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWN 489
+ ++++G + K + +VD+ + G L AE + ++V++PDL W
Sbjct: 480 NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 490 ALLGGYSHYGMAEEAFMVFEVILEHGLRP-DEITFLSLLSACSHSGLVERGKILWNQMKE 548
LL + E A + ILE + P DE T + + + + +G R + ++MK+
Sbjct: 540 TLLSACKVHRKVEMAERITRKILE--IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKD 597
Query: 549 HSL 551
L
Sbjct: 598 MKL 600
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 198/413 (47%), Gaps = 7/413 (1%)
Query: 215 TQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVF 274
T ++S LL C + K I A ++ S ++ + L+D KC D A VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVF 122
Query: 275 TRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPAS 334
+ +V+WNS+IA +++ ++AV+M+ + ++L PDEYT +++ A S L
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL-PDEYTLSSVFKAFSDLSLE 181
Query: 335 AYGKPLHALVIKTGYD-SSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIG 393
+ H L + G + S+VFVG+ L++MY K G + V + EKD+VL T +I+G
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 394 HSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVE 453
+S+ G+ A+K F M E ++ + + + L +C +L + G++IH K+G
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 454 MSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILE 513
++ SL+ MY + + + +F + +P+ W +L+ G G E A + F ++
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 514 HGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDE 573
++P+ T S L CS+ + E G+ + + ++ S ++ L + G D
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 574 AENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQV--LRLDPEDGTT 624
A + SE+ + T++ + R + E++ L L P D T
Sbjct: 422 AR--LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTV 472
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 404 IKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGS-LVD 462
+L C C NF S L C D + + I + K+G E+S GS LVD
Sbjct: 52 FRLLCITCDTLTTTHNF--SQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS--GSKLVD 107
Query: 463 MYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEIT 522
K GD+ A +F + + WN+L+ + ++EA ++ +++ + + PDE T
Sbjct: 108 ASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYT 167
Query: 523 FLSLLSACS 531
S+ A S
Sbjct: 168 LSSVFKAFS 176
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 344/662 (51%), Gaps = 20/662 (3%)
Query: 49 YMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEF 108
++ + ++S + + GS+ AR+VF+++ R+ V+ N L+ R T +D
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 109 ECLRPNGLTFT-------SLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTC-VQTSLLGMY 160
+ P SLA+ V L + G +H VI G + + L+ MY
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKK----GREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 161 SNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYS 220
+ CG A+R+F + DKD+V+WNS+I G +N E + + +M + P F+
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 221 MLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENP 280
L++C+ + G+ IH + +++ + NAL+ +Y++ +F+ +
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 281 DLVSWNSMIAGYMENGNG-EKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKP 339
D VSWNS+I + +AV F+ +R K + TF++++SA S+L GK
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 340 LHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEK-DIVLWTEMIIGHSRMG 398
+H L +K L+ Y K G+ + +K+F +AE+ D V W MI G+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 399 DGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCG 458
A+ L M + G + D+F + LSA A +A L++G +H+ + + ++ V
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 459 SLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVI-LEHGLR 517
+LVDMY+K G L A F+ + + WN+++ GY+ +G EEA +FE + L+
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718
Query: 518 PDEITFLSLLSACSHSGLVERGKILWNQMKE-HSLIPGHKHYSCMVSLLSRAGLLDEAEN 576
PD +TF+ +LSACSH+GL+E G + M + + L P +H+SCM +L RAG LD+ E+
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778
Query: 577 LIAESPYSEIRIELWRTLLSTCVAK--RNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAA 634
I + P + +WRT+L C R + + +AAE + +L+PE+ ++LL N+YAA
Sbjct: 779 FIEKMPMKP-NVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837
Query: 635 TGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGN 694
GRW+ + K R+KMK + + KE G SW+ K+ VH+F +GD+SHP D +L L
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRK 897
Query: 695 MR 696
MR
Sbjct: 898 MR 899
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 269/564 (47%), Gaps = 24/564 (4%)
Query: 49 YMYNNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEF 108
Y+ NN+++ Y G AR+VFDE+P R+ VS+ +++ YSR+ +H L D ++
Sbjct: 37 YLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVK- 95
Query: 109 ECLRPNGLTFTSLAQAVSLLEDQ--LMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNC-GD 165
E + N F S+ +A + L G +H + K + D V L+ MY C G
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGS 155
Query: 166 FESAKRIFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSY-SMLLN 224
A FG I K++V+WNSII + + +F +M G PT++++ S++
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 225 ACSRMGNFV-CGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLV 283
ACS V + I + S DL + + L+ ++K A VF ++E + V
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAV 275
Query: 284 SWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAY------- 336
+ N ++ G + GE+A +F+ + M + P+ Y + S+ P +
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY-----VILLSSFPEYSLAEEVGLK 330
Query: 337 -GKPLHALVIKTG-YDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGH 394
G+ +H VI TG D V +G L+NMY K G ++VF + +KD V W MI G
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 395 SRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEM 454
+ G A++ + M R + +F L +LS+CA L K G+ IH ++ K G + +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 455 SVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMA-EEAFMVFEVILE 513
SV +L+ +YA+ G L IFS + D WN+++G + + EA + F
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 514 HGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDE 573
G + + ITF S+LSA S E GK + ++++ + +++ + G +D
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDG 570
Query: 574 AENLIAESPYSEIRIEL-WRTLLS 596
E + S +E R + W +++S
Sbjct: 571 CEKIF--SRMAERRDNVTWNSMIS 592
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 234/481 (48%), Gaps = 14/481 (2%)
Query: 20 ASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRSL 79
A LK+ R++H V+TT + + N +++MY +CGSI DAR+VF + +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVG---IGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 80 VSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLHA 139
VS+N++I ++ R + L P T S + + L+ +G +H
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 140 QVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDK-MK 198
+ +K G + V +L+ +Y+ G ++IF + + D V+WNSII ++++ +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 199 EGLSLF--GAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENA 256
E + F G +N FS + + G GK IH + +N + ENA
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENA 557
Query: 257 LLDMYSKCSDTQTAFSVFTRI-ENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLK 315
L+ Y KC + +F+R+ E D V+WNSMI+GY+ N KA+D+ V + +
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL-VWFMLQTGQR 616
Query: 316 PDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKV 375
D + +A ++SA +++ G +HA ++ +S V VG+ L++MY K G + +
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 376 FMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREG-LKCDNFALSGALSACADLAI 434
F + ++ W MI G++R G GE A+KLF M +G D+ G LSAC+ +
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 435 LKQG-EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQV-LHPDLKCWNALL 492
L++G + S ++ G + + D+ + G+L E ++ + P++ W +L
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 493 G 493
G
Sbjct: 797 G 797
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 219/457 (47%), Gaps = 11/457 (2%)
Query: 136 LLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKND 195
H+++ K +D + +L+ Y GD SA+++F + ++ V+W I+ G +N
Sbjct: 22 FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 196 KMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGN--FVCGKVIHARVIISNTQVDLPL 253
+ KE L MV G+ Q+++ +L AC +G+ + G+ IH + + VD +
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 254 ENALLDMYSKC-SDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMS 312
N L+ MY KC A F IE + VSWNS+I+ Y + G+ A +F ++ +
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QYD 200
Query: 313 LLKPDEYTFAAIISATSAL--PASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAE 370
+P EYTF ++++ +L P + + + K+G + +FVG+ L++ + K+G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 371 SPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKM-CREGLKCDNFAL---SGAL 426
+KVF + ++ V +++G R GE A KLF M + +++ + S
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 427 SACADLAILKQGEMIHSQAEKTGHGVEMSVCGS-LVDMYAKNGDLRAAESIFSQVLHPDL 485
+ A+ LK+G +H TG M G+ LV+MYAK G + A +F + D
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 486 KCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQ 545
WN+++ G G EA ++ + H + P T +S LS+C+ + G+ + +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 546 MKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESP 582
+ + + +++L + G L+E + + P
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 19 CASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVFDEIPKRS 78
CAS+ K +QIH L I +N + N ++++Y G + + R++F +P+
Sbjct: 425 CASLKWAKLGQQIHGESLKLG-IDLNVS---VSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 79 LVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLLEDQLMGSLLH 138
VS+N++I A +R + + N +TF+S+ AVS L +G +H
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 139 AQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDK-DAVAWNSIILGNFKNDKM 197
+K +++ + +L+ Y CG+ + ++IF + ++ D V WNS+I G N+ +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 198 KEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENAL 257
+ L L M+ +G F Y+ +L+A + + G +HA + + + D+ + +AL
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 660
Query: 258 LDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPD 317
+DMYSKC A F + + SWNSMI+GY +G GE+A+ +F ++ PD
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 318 EYTFAAIISATS 329
TF ++SA S
Sbjct: 721 HVTFVGVLSACS 732
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 229 MGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSM 288
+G+ + H+R+ + D+ L N L++ Y + D+ +A VF + + VSW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 289 IAGYMENGNGEKAVDMFVALRRM--SLLKPDEYTFAAIISATSALPASA--YGKPLHALV 344
++GY NG ++A+ V LR M + ++Y F +++ A + + +G+ +H L+
Sbjct: 74 VSGYSRNGEHKEAL---VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130
Query: 345 IKTGYDSSVFVGTTLLNMYFKN-GDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECA 403
K Y V L++MY+K G F I K+ V W +I +S+ GD A
Sbjct: 131 FKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSA 190
Query: 404 IKLFCKMCREGLKCDNFAL-SGALSACA----DLAILKQGEMIHSQAEKTGHGVEMSVCG 458
++F M +G + + S +AC+ D+ +L+Q I +K+G ++ V
Sbjct: 191 FRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTDLFVGS 247
Query: 459 SLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVF 508
LV +AK+G L A +F+Q+ + N L+ G EEA +F
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 13 ATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVL-SMYGRCGSIRDARQVF 71
AT++ AS+ +L+R ++HA + +S + + L MY +CG + A + F
Sbjct: 623 ATVLSAFASVATLERGMEVHAC-----SVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFEC-LRPNGLTFTSLAQAVS---L 127
+ +P R+ S+N++I+ Y+R H +L + M+ + P+ +TF + A S L
Sbjct: 678 NTMPVRNSYSWNSMISGYAR-HGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 128 LED 130
LE+
Sbjct: 737 LEE 739
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 210/688 (30%), Positives = 341/688 (49%), Gaps = 47/688 (6%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
IA ++ C + + KR I A V+ +Q+ ++ NNV+SMY + DA +VF
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGI----SQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 72 DEIPKRSLVSYNALIAAYSRD---HDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSLL 128
DE+ +R++V++ +++ Y+ D + L R++D E N ++++ +A L+
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEA---ANEFMYSAVLKACGLV 120
Query: 129 EDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSII 188
D +G L++ ++ K D + S++ MY G A F I + +WN++I
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 189 LGNFKNDKMKEGLSLFGAMV-----------------GS-------------GVNPTQFS 218
G K M E ++LF M GS G+ F+
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240
Query: 219 YSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIE 278
L ACS G GK +H V+ S + +AL+DMYS C A VF + +
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 279 ---NPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASA 335
N + WNSM++G++ N E A+ + + + + S L D YT + +
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ-SDLCFDSYTLSGALKICINYVNLR 359
Query: 336 YGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHS 395
G +H+LV+ +GY+ VG+ L++++ G+ + K+F + KDI+ ++ +I G
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 396 RMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMS 455
+ G A LF ++ + GL D F +S L C+ LA L G+ IH K G+ E
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 456 VCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHG 515
+LVDMY K G++ +F +L D+ W ++ G+ G EEAF F ++ G
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG 539
Query: 516 LRPDEITFLSLLSACSHSGLVERGKILWNQMK-EHSLIPGHKHYSCMVSLLSRAGLLDEA 574
+ P+++TFL LLSAC HSGL+E + MK E+ L P +HY C+V LL +AGL EA
Sbjct: 540 IEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEA 599
Query: 575 ENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAA 634
LI + P E +W +LL+ C +N+ +V AE++L+ P+D + + LSN YA
Sbjct: 600 NELINKMPL-EPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 635 TGRWDCVAKMRRKMKGSMLGKEPGLSWI 662
G WD ++K+R K + KE G+SWI
Sbjct: 659 LGMWDQLSKVREAAK-KLGAKESGMSWI 685
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 297/567 (52%), Gaps = 6/567 (1%)
Query: 133 MGSLLHAQVIK-YGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGN 191
+G ++HA+++K S + L+ MYS ESA+ + L ++ V+W S+I G
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 192 FKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDL 251
+N L F M GV P F++ A + + V GK IHA + +D+
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 252 PLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRM 311
+ + DMY K A +F I +L +WN+ I+ + +G +A++ F+ RR+
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 312 SLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAES 371
P+ TF A ++A S G LH LV+++G+D+ V V L++ Y K S
Sbjct: 204 DG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 372 PQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACAD 431
+ +F + K+ V W ++ + + + E A L+ + ++ ++ +F +S LSACA
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 432 LAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNAL 491
+A L+ G IH+ A K + V +LVDMY K G + +E F ++ +L N+L
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 492 LGGYSHYGMAEEAFMVFEVILEHGL--RPDEITFLSLLSACSHSGLVERGKILWNQMKE- 548
+GGY+H G + A +FE + G P+ +TF+SLLSACS +G VE G +++ M+
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 549 HSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLSTCVAKRNSRMVI 608
+ + PG +HYSC+V +L RAG+++ A I + P I +W L + C ++ +
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT-ISVWGALQNACRMHGKPQLGL 501
Query: 609 QAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKEPGLSWIEAKNNV 668
AAE + +LDP+D H+LLSN +AA GRW +R ++KG + K G SWI KN V
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 669 HVFSSGDQSHPKIDDAQAELHRLRGNM 695
H F + D+SH + Q L +LR M
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEM 588
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 246/509 (48%), Gaps = 15/509 (2%)
Query: 12 IATLIQICASITSLKRARQIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDARQVF 71
+ L++ S +S++ R +HA ++ T P P++ N +++MY + AR V
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSP---PPPFLANYLINMYSKLDHPESARLVL 65
Query: 72 DEIPKRSLVSYNALIAAYSRDHDHAHLTFRLID--QMEFECLRPNGLTFTSLAQAVSLLE 129
P R++VS+ +LI+ +++ H + L++ +M E + PN TF +AV+ L
Sbjct: 66 RLTPARNVVSWTSLISGLAQN---GHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLR 122
Query: 130 DQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIIL 189
+ G +HA +K G D V S MY + A+++F I +++ WN+ I
Sbjct: 123 LPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 190 GNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQV 249
+ + + +E + F +P ++ LNACS + G +H V+ S
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 250 DLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALR 309
D+ + N L+D Y KC +++ +FT + + VSW S++A Y++N EKA +++ R
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 310 RMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDA 369
+ +++ ++ ++++SA + + G+ +HA +K + ++FVG+ L++MY K G
Sbjct: 303 K-DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 370 ESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGL--KCDNFALSGALS 427
E ++ F + EK++V +I G++ G + A+ LF +M G + LS
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 428 ACADLAILKQGEMIHSQAEKTGHGVEMSV--CGSLVDMYAKNGDL-RAAESIFSQVLHPD 484
AC+ ++ G I T +G+E +VDM + G + RA E I + P
Sbjct: 422 ACSRAGAVENGMKIFDSMRST-YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 485 LKCWNALLGGYSHYGMAEEAFMVFEVILE 513
+ W AL +G + + E + +
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFK 509
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 318/641 (49%), Gaps = 13/641 (2%)
Query: 62 GSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFEC-LRPNGLTFTS 120
G+I AR +F + + + +N L+ +S + + H + + + L+PN T+
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVN-ESPHSSLSVFAHLRKSTDLKPNSSTYAF 124
Query: 121 LAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKD 180
A S D G ++H Q + G + + ++++ MY E A+++F + +KD
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD 184
Query: 181 AVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLN---ACSRMGNFVCGKV 237
+ WN++I G KN+ E + +F ++ T+ + LL+ A + + G
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESC--TRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 238 IHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGN 297
IH+ + + + +YSKC + ++F PD+V++N+MI GY NG
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 298 GEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGT 357
E ++ +F L +S + T +++ + L +H +K+ + S V T
Sbjct: 303 TELSLSLFKELM-LSGARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVST 358
Query: 358 TLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKC 417
L +Y K + ES +K+F EK + W MI G+++ G E AI LF +M +
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP 418
Query: 418 DNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIF 477
+ ++ LSACA L L G+ +H T + V +L+ MYAK G + A +F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 478 SQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVE 537
+ + WN ++ GY +G +EA +F +L G+ P +TFL +L ACSH+GLV+
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 538 RGKILWNQM-KEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLLS 596
G ++N M + P KHY+CMV +L RAG L A I E+ E +W TLL
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI-EAMSIEPGSSVWETLLG 597
Query: 597 TCVAKRNSRMVIQAAEQVLRLDPEDGTTHILLSNLYAATGRWDCVAKMRRKMKGSMLGKE 656
C +++ + +E++ LDP++ H+LLSN+++A + A +R+ K L K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 657 PGLSWIEAKNNVHVFSSGDQSHPKIDDAQAELHRLRGNMRK 697
PG + IE HVF+SGDQSHP++ + +L +L G MR+
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 235/479 (49%), Gaps = 8/479 (1%)
Query: 52 NNVLSMYGRCGSIRDARQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECL 111
+N++ MY + + DAR+VFD +P++ + +N +I+ Y ++ + D + C
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 112 RPNGLTFTSLAQAVSLLEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKR 171
R + T + AV+ L++ +G +H+ K G V T + +YS CG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 172 IFGLIGDKDAVAWNSIILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGN 231
+F D VA+N++I G N + + LSLF ++ SG + S L++ G+
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLRSSTLVSLVPVSGH 334
Query: 232 FVCGKVIHARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAG 291
+ IH + SN + AL +YSK ++ ++A +F L SWN+MI+G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 292 YMENGNGEKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDS 351
Y +NG E A+ +F +++ S P+ T I+SA + L A + GK +H LV T ++S
Sbjct: 395 YTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 352 SVFVGTTLLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMC 411
S++V T L+ MY K G +++F L+ +K+ V W MI G+ G G+ A+ +F +M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 412 REGLKCDNFALSGALSACADLAILKQG-EMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDL 470
G+ L AC+ ++K+G E+ +S + G + +VD+ + G L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 471 -RAAESIFSQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLS 528
RA + I + + P W LLG + A V E + E L PD + + LLS
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 207/442 (46%), Gaps = 4/442 (0%)
Query: 138 HAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSIILGNFKNDKM 197
HAQ+I +G D + T L S+ G A+ IF + D +N ++ G N+
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 198 KEGLSLFGAMVGS-GVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNTQVDLPLENA 256
LS+F + S + P +Y+ ++A S + G+VIH + ++ +L L +
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 257 LLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVALRRMSLLKP 316
++ MY K + A VF R+ D + WN+MI+GY +N +++ +F L S +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 317 DEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTTLLNMYFKNGDAESPQKVF 376
D T I+ A + L G +H+L KTG S +V T +++Y K G + +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 377 MLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREGLKCDNFALSGALSACADLAILK 436
+ DIV + MI G++ G+ E ++ LF ++ G + + L + L ++
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 437 QGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIFSQVLHPDLKCWNALLGGYS 496
IH K+ SV +L +Y+K ++ +A +F + L WNA++ GY+
Sbjct: 340 A---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 497 HYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVERGKILWNQMKEHSLIPGHK 556
G+ E+A +F + + P+ +T +LSAC+ G + GK + + ++
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 557 HYSCMVSLLSRAGLLDEAENLI 578
+ ++ + ++ G + EA L
Sbjct: 457 VSTALIGMYAKCGSIAEARRLF 478
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 10/361 (2%)
Query: 239 HARVIISNTQVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNG 298
HA++I+ + D+ L L S A +F ++ PD+ +N ++ G+ N +
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 299 EKAVDMFVALRRMSLLKPDEYTFAAIISATSALPASAYGKPLHALVIKTGYDSSVFVGTT 358
++ +F LR+ + LKP+ T+A ISA S G+ +H + G DS + +G+
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 359 LLNMYFKNGDAESPQKVFMLIAEKDIVLWTEMIIGHSRMGDGECAIKLFCKMCREG-LKC 417
++ MYFK E +KVF + EKD +LW MI G+ + +I++F + E +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 418 DNFALSGALSACADLAILKQGEMIHSQAEKTGHGVEMSVCGSLVDMYAKNGDLRAAESIF 477
D L L A A+L L+ G IHS A KTG V + +Y+K G ++ ++F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 478 SQVLHPDLKCWNALLGGYSHYGMAEEAFMVFEVILEHGLRPDEITFLSLLSACSHSGLVE 537
+ PD+ +NA++ GY+ G E + +F+ ++ G R T +SL+ H L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 538 --RGKILWNQMKEHSLIPGHKHYSCMVSLLSRAGLLDEAENLIAESPYSEIRIELWRTLL 595
G L + H+ + + + ++ S+ ++ A L ESP E + W ++
Sbjct: 340 AIHGYCLKSNFLSHASVS-----TALTTVYSKLNEIESARKLFDESP--EKSLPSWNAMI 392
Query: 596 S 596
S
Sbjct: 393 S 393
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 171/347 (49%), Gaps = 13/347 (3%)
Query: 11 NIATLIQICASITSLKRAR---QIHALVLTTNHIPINAQSPYMYNNVLSMYGRCGSIRDA 67
+ TL+ I ++ L+ R QIH+L T Y+ +S+Y +CG I+
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTG----CYSHDYVLTGFISLYSKCGKIKMG 275
Query: 68 RQVFDEIPKRSLVSYNALIAAYSRDHDHAHLTFRLIDQMEFECLRPNGLTFTSLAQAVSL 127
+F E K +V+YNA+I Y+ + + L+ L ++ R T SL
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGE-TELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 128 LEDQLMGSLLHAQVIKYGSSEDTCVQTSLLGMYSNCGDFESAKRIFGLIGDKDAVAWNSI 187
L ++ +H +K V T+L +YS + ESA+++F +K +WN++
Sbjct: 335 L---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 188 ILGNFKNDKMKEGLSLFGAMVGSGVNPTQFSYSMLLNACSRMGNFVCGKVIHARVIISNT 247
I G +N ++ +SLF M S +P + + +L+AC+++G GK +H V ++
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 248 QVDLPLENALLDMYSKCSDTQTAFSVFTRIENPDLVSWNSMIAGYMENGNGEKAVDMFVA 307
+ + + AL+ MY+KC A +F + + V+WN+MI+GY +G G++A+++F
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 308 LRRMSLLKPDEYTFAAIISATSALPASAYGKPL-HALVIKTGYDSSV 353
+ S + P TF ++ A S G + ++++ + G++ SV
Sbjct: 512 MLN-SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,798,342
Number of Sequences: 539616
Number of extensions: 10318414
Number of successful extensions: 31376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 22386
Number of HSP's gapped (non-prelim): 2524
length of query: 708
length of database: 191,569,459
effective HSP length: 125
effective length of query: 583
effective length of database: 124,117,459
effective search space: 72360478597
effective search space used: 72360478597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)