BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038518
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 38 GSLYEVLRVEPKATISEIKTA-----KVYHPDLSGNGR-------DFTEIHNTYETLLDP 85
SLY+VL V AT +IK+A ++ HPD++G R +F +IH Y TL DP
Sbjct: 64 ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123
Query: 86 KAKAVYDMSLVSRRRTRTTSFGCSGRSGFHPTRRWETDQCW 126
+ ++VYD ++ RR+R + G SG G + R WETDQCW
Sbjct: 124 EKRSVYDRRML--RRSRPLTVGTSGL-GSYVGRNWETDQCW 161
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 39 SLYEVLRVEPKATISEIKT-----AKVYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
+LY++L + AT+ EIKT AK YHPD++ G D F +I+N Y L D KA YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 93 MSL 95
L
Sbjct: 62 AML 64
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 39 SLYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD----FTEIHNTYETLLDPKAKA 89
LYE+L V+ A+ EIK A K YHPDL+ ++ F EI+ YE L DP+ +A
Sbjct: 5 DLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 64
Query: 90 VYDM 93
YD
Sbjct: 65 QYDQ 68
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 39 SLYEVLRVEPKATISEIKTA-----KVYHPDLSGNG-RDFTEIHNTYETLLDPKAKAVYD 92
+LY++L + A+I EIK A K YHPD++ G + F EI+N Y L DP K YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 93 -MSLVSRRRTRTTSFGCSGR 111
M V+ + R + S R
Sbjct: 62 SMLKVNDFQNRIKNLDISVR 81
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 39 SLYEVLRVEPKATISEIKT-----AKVYHPDLSGNGRD----FTEIHNTYETLLDPKAKA 89
+LYE+L V AT EIK AK YHPD++ + F EI+ YE L D + +
Sbjct: 3 NLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKRK 62
Query: 90 VYDM 93
YDM
Sbjct: 63 KYDM 66
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL + A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL + A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL + A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL + A+ EIK A K YHPD++ G F EI YE L DP+ +A YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 36 TRGSLYEVLRVEPKATISEIKTA-----KVYHPDLSGN---GRDFTEIHNTYETLLDPKA 87
T+ YE+L V AT EIK A + YHPDL+ + F EI+ YE L DP+
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62
Query: 88 KAVYDM 93
+A YD
Sbjct: 63 RAQYDQ 68
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=psi1 PE=2 SV=2
Length = 379
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 40 LYEVLRVEPKATISEIKTAK-----VYHPDLSGNG-RDFTEIHNTYETLLDPKAKAVYDM 93
LY+ L V P+A+ +E+K A YHPD + NG + F EI YE L DP+ + +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQ 66
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVY 91
LY+VL VE A+ EIK A K YHPDL+ G F ++ YETL D + +A Y
Sbjct: 6 LYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRAQY 65
Query: 92 DM 93
D
Sbjct: 66 DQ 67
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
LY++L V P A+ +E+K A K YHPD + N D F EI YE L +P+ + +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
LY++L V P A+ +E+K A K YHPD + N D F EI YE L +P+ + +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
LY++L V P A+ +E+K A K YHPD + N D F EI YE L +P+ + +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
LY++L V P A+ +E+K A K YHPD + N D F EI YE L +P+ + +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1
PE=2 SV=1
Length = 397
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1
SV=1
Length = 397
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2
SV=1
Length = 396
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1
SV=2
Length = 397
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2
SV=2
Length = 397
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops
GN=DNAJA1 PE=2 SV=1
Length = 397
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 39 SLYEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
+ Y+VL V+P AT E+K A YHPD + N G F +I YE L D K + +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 34 LGTRGSLYEVLRVEPKATISEIKTA-----KVYHPDLSGNG---RDFTEIHNTYETLLDP 85
+ T+ YEVL + A+ EIK A K YHPD++ F E+ YE L DP
Sbjct: 1 MATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDP 60
Query: 86 KAKAVYDM 93
+ KA YD
Sbjct: 61 QKKAAYDQ 68
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 41 YEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
Y++L V+P A+ EIK A YHPD + + G F I YE L DPK + VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLSGNGR----DFTEIHNTYETLLDPKAKAVY 91
YE+L V+ A+ +EIK A K YHPD++ + F EI+ YE L DP+ +A Y
Sbjct: 8 YEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARY 67
Query: 92 DM 93
D
Sbjct: 68 DQ 69
>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana
GN=ATJ1 PE=2 SV=2
Length = 408
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 25/95 (26%)
Query: 8 LFD-FIAASGRNKRSPRAVSVEMPVMALGTRGSLYEVLRVEPKATISEIKT-----AKVY 61
LF+ +I A+G N S R + Y+VL V PKAT EIK AK +
Sbjct: 31 LFERYIHATGINNSSAR---------------NYYDVLGVSPKATREEIKKSFHELAKKF 75
Query: 62 HPDLSGNG----RDFTEIHNTYETLLDPKAKAVYD 92
HPD + N R F EI YETL + + + YD
Sbjct: 76 HPDTNRNNPSAKRKFQEIREAYETLGNSERREEYD 110
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain Massachusetts
/ E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 39 SLYEVLRVEPKATISEIKTA--KV---YHPDLSGNGRD----FTEIHNTYETLLDPKAKA 89
YEVL VE A +EIK A K+ YHPD + ++ F EI+ Y+ L DP+ +A
Sbjct: 5 DFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRA 64
Query: 90 VYDMSLVSRRRTRTTSFGCSGRSGFH 115
YD + T + G +G SGF
Sbjct: 65 QYD-----QFGTADFNGGGAGFSGFE 85
>sp|Q92T07|DNAJ_RHIME Chaperone protein DnaJ OS=Rhizobium meliloti (strain 1021)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD----FTEIHNTYETLLDPKAKAV 90
LYE L V+ A E+K+A YHPD + ++ F EI+ YETL DP+ +A
Sbjct: 5 LYETLGVQKNADEKELKSAFRKLAMKYHPDRNPGDQESEKSFKEINEAYETLKDPQKRAA 64
Query: 91 YD 92
YD
Sbjct: 65 YD 66
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD++ G+ F E+ YETL D + +A YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|Q0K758|DNAJ_CUPNH Chaperone protein DnaJ OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1
Length = 381
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-------FTEIHNTYETLLDPKAK 88
YEVL V A+ EIK A YHPD + G+D F E+ YE L DP+ K
Sbjct: 7 YEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKK 66
Query: 89 AVYDM 93
A YD
Sbjct: 67 AAYDQ 71
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 40 LYEVLRVEPKATISEIK-----TAKVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVY 91
YE+L V A E+K A+ YHPD++ G F EI+ YE L DP+A+A Y
Sbjct: 5 FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANY 64
Query: 92 D 92
D
Sbjct: 65 D 65
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 32 MALGTRGSLYEVLRVEPKATISEIKTA-----KVYHPDLSGN---GRDFTEIHNTYETLL 83
MA T+ YE+L V A+ EIK A + YHPD+ F EI+ Y+ L
Sbjct: 1 MASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLS 60
Query: 84 DPKAKAVYDM 93
DP+ + +YDM
Sbjct: 61 DPEKRKLYDM 70
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLSGNGR---DFTEIHNTYETLLDPKAKAVYD 92
YEVL V+ A++ E+K A + YHPD++ F E+ Y+TL DP+ KA YD
Sbjct: 7 YEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYD 66
Query: 93 MSLVSRRRTRTTSFGCSGRSG 113
+ FG +G SG
Sbjct: 67 QFGHA---DPNQGFGGAGASG 84
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD++ G+ F E+ YETL D + ++ YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|A6UEY1|DNAJ_SINMW Chaperone protein DnaJ OS=Sinorhizobium medicae (strain WSM419)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLS-GNG---RDFTEIHNTYETLLDPKAKAV 90
LYE L V+ A E+K+A YHPD + G+ + F EI+ YETL DP+ +A
Sbjct: 5 LYETLGVQKSADEKELKSAFRKLAMKYHPDRNPGDNEAEKSFKEINEAYETLKDPQKRAA 64
Query: 91 YD 92
YD
Sbjct: 65 YD 66
>sp|B1HUD0|DNAJ_LYSSC Chaperone protein DnaJ OS=Lysinibacillus sphaericus (strain
C3-41) GN=dnaJ PE=3 SV=1
Length = 372
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL + AT EIK A K YHPDL+ G F EI YE L D + KA YD
Sbjct: 7 YEVLGLTKSATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 41 YEVLRVEPKATISEIKTAK-----VYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYD 92
Y++L V+P A+ EIK A YHPD + + G F I YE L DPK + +YD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 65
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD-----FTEIHNTYETLLDPKAKAV 90
Y++L V+ AT EIK A K +HPDL + F EI YE L DP+ + +
Sbjct: 6 YKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQEAEEKFKEISEAYEVLSDPQKRRM 65
Query: 91 YDMSLVSRRRTRTTSFGCSGRS 112
YD +T T FG G++
Sbjct: 66 YD-------QTGTVDFGAGGQN 80
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 40 LYEVLRVEPKATISEIKTAK-----VYHPDLSGNGRD-FTEIHNTYETLLDPKAKAVYD 92
LYEVL V+ A+ +E+K A YHPD + N D F EI YE L D + +A YD
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYD 65
>sp|C3MC05|DNAJ_RHISN Chaperone protein DnaJ OS=Rhizobium sp. (strain NGR234) GN=dnaJ
PE=3 SV=1
Length = 379
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 40 LYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD----FTEIHNTYETLLDPKAKAV 90
LYE L V+ A E+K+A YHPD + ++ F EI+ YETL DP+ +A
Sbjct: 5 LYETLGVKKNADEKELKSAFRKLAMKYHPDRNPGDQEAEKSFKEINEAYETLKDPQKRAA 64
Query: 91 YD 92
YD
Sbjct: 65 YD 66
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD++ G F E+ YETL D + +A YD
Sbjct: 7 YEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 39 SLYEVLRVEPKATISEIKTA-----KVYHPDLSGNGR------DFTEIHNTYETLLDPKA 87
S Y++L V T+ EIK A + YHPD+S R F + YETL DP+
Sbjct: 66 SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125
Query: 88 KAVYDMSLVSRRRTRTTSFGCSGR 111
+ +YD L + SF SGR
Sbjct: 126 RVLYDRDL-----SMGFSFSFSGR 144
>sp|Q6A997|DNAJ1_PROAC Chaperone protein DnaJ 1 OS=Propionibacterium acnes (strain
KPA171202 / DSM 16379) GN=dnaJ1 PE=3 SV=1
Length = 392
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLSGNG--RDFTEIHNTYETLLDPKAKAVYD 92
YE+L V A+ EIK A HPD++G G +F ++ YE L DP+ +AV+D
Sbjct: 6 YEILGVSHDASADEIKKAYRRKAMKLHPDVAGPGSEEEFKKVQEAYEILQDPQKRAVFD 64
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 34 LGTRGSLYEVLRVEPKATISEIK-----TAKVYHPDLSGNGRD----FTEIHNTYETLLD 84
+ + YE+L V AT EIK AK YHPD + ++ F EI+ YE L D
Sbjct: 1 MAQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSD 60
Query: 85 PKAKAVYDM 93
P+ + +YD
Sbjct: 61 PEKRKLYDQ 69
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ
PE=2 SV=1
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 39 SLYEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAV 90
YE+L V AT +EIK A K YHPD++ G F E+ YE L D + +A
Sbjct: 6 DFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRAN 65
Query: 91 YDM 93
YD
Sbjct: 66 YDQ 68
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain
FZB42) GN=dnaJ PE=3 SV=1
Length = 375
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDL---SGNGRDFTEIHNTYETLLDPKAKAVYD 92
YEVL V A+ EIK A K YHPD+ SG F E+ YE L D + +A YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|P35514|DNAJ_LACLA Chaperone protein DnaJ OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=dnaJ PE=3 SV=2
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 YEVLRVEPKATISEIKTA-----KVYHPDLS---GNGRDFTEIHNTYETLLDPKAKAVYD 92
YE L V+ A+ EIK A K YHPDL+ G + E+ YETL D + +A YD
Sbjct: 7 YERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEEKYKEVQEAYETLSDEQKRAAYD 66
Query: 93 M 93
Sbjct: 67 Q 67
>sp|Q6RSN5|DNAJ_RHIRD Chaperone protein DnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 37 RGSLYEVLRVEPKATISEIKTA-----KVYHPDLSGNGRD----FTEIHNTYETLLDPKA 87
+ YE L V A E+K+A YHPD + + D F EI+ YETL DP+
Sbjct: 3 KADFYETLGVSKTADEKELKSAFRKLAMKYHPDKNPDDADSERKFKEINEAYETLKDPQK 62
Query: 88 KAVYD 92
+A YD
Sbjct: 63 RAAYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,681,887
Number of Sequences: 539616
Number of extensions: 1605362
Number of successful extensions: 4245
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 650
Number of HSP's that attempted gapping in prelim test: 3998
Number of HSP's gapped (non-prelim): 725
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)