Query 038518
Match_columns 131
No_of_seqs 141 out of 1593
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 11:53:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 2.1E-21 4.6E-26 158.7 7.4 64 37-100 3-75 (371)
2 KOG0713 Molecular chaperone (D 99.8 5.3E-20 1.1E-24 148.0 6.8 67 36-102 14-89 (336)
3 KOG0712 Molecular chaperone (D 99.7 5.8E-18 1.2E-22 137.0 6.3 64 37-100 3-72 (337)
4 PRK14288 chaperone protein Dna 99.7 1.1E-17 2.4E-22 137.3 6.1 61 37-97 2-71 (369)
5 PRK14296 chaperone protein Dna 99.7 2.2E-17 4.8E-22 135.7 6.1 61 37-97 3-71 (372)
6 PTZ00037 DnaJ_C chaperone prot 99.7 2.4E-17 5.2E-22 137.5 5.9 62 37-98 27-93 (421)
7 PRK14286 chaperone protein Dna 99.7 9E-17 2E-21 132.1 7.4 62 37-98 3-73 (372)
8 PRK14279 chaperone protein Dna 99.7 9.5E-17 2E-21 132.8 5.6 60 37-96 8-76 (392)
9 PRK14298 chaperone protein Dna 99.6 1.8E-16 3.9E-21 130.5 5.7 62 37-98 4-73 (377)
10 PRK14282 chaperone protein Dna 99.6 3.7E-16 8E-21 128.3 7.5 62 37-98 3-74 (369)
11 PRK14287 chaperone protein Dna 99.6 3.2E-16 7E-21 128.8 6.2 62 37-98 3-72 (371)
12 PRK14276 chaperone protein Dna 99.6 3.2E-16 7E-21 129.1 6.1 62 37-98 3-72 (380)
13 PRK14283 chaperone protein Dna 99.6 3.8E-16 8.3E-21 128.5 6.4 62 37-98 4-73 (378)
14 PRK14277 chaperone protein Dna 99.6 5.9E-16 1.3E-20 127.8 6.4 62 37-98 4-74 (386)
15 PRK14291 chaperone protein Dna 99.6 6.5E-16 1.4E-20 127.4 6.2 62 37-98 2-71 (382)
16 PRK14285 chaperone protein Dna 99.6 5.5E-16 1.2E-20 127.2 5.7 60 38-97 3-71 (365)
17 PF00226 DnaJ: DnaJ domain; I 99.6 5.6E-16 1.2E-20 97.2 4.4 54 39-92 1-64 (64)
18 PRK14280 chaperone protein Dna 99.6 7.1E-16 1.5E-20 126.9 6.2 62 37-98 3-72 (376)
19 PRK14299 chaperone protein Dna 99.6 7.6E-16 1.6E-20 122.9 6.1 61 37-97 3-71 (291)
20 PRK14284 chaperone protein Dna 99.6 1.4E-15 2.9E-20 125.8 7.3 61 38-98 1-70 (391)
21 PRK14297 chaperone protein Dna 99.6 6.7E-16 1.4E-20 127.2 5.2 62 37-98 3-73 (380)
22 PRK14294 chaperone protein Dna 99.6 1E-15 2.2E-20 125.6 6.2 62 37-98 3-73 (366)
23 PRK14278 chaperone protein Dna 99.6 9.6E-16 2.1E-20 126.3 5.7 60 38-97 3-70 (378)
24 PRK14295 chaperone protein Dna 99.6 1.2E-15 2.6E-20 126.2 5.9 61 37-97 8-81 (389)
25 PRK14301 chaperone protein Dna 99.6 1E-15 2.2E-20 125.9 5.5 62 37-98 3-73 (373)
26 KOG0715 Molecular chaperone (D 99.6 1.4E-15 3.1E-20 121.4 6.0 61 38-98 43-111 (288)
27 KOG0691 Molecular chaperone (D 99.6 2E-15 4.4E-20 120.7 6.2 65 37-101 4-77 (296)
28 PRK14281 chaperone protein Dna 99.6 1.8E-15 4E-20 125.3 5.6 61 38-98 3-72 (397)
29 PRK10767 chaperone protein Dna 99.6 2.4E-15 5.2E-20 123.5 6.0 62 37-98 3-73 (371)
30 KOG0716 Molecular chaperone (D 99.6 2.3E-15 5E-20 118.3 5.0 63 37-99 30-101 (279)
31 KOG0717 Molecular chaperone (D 99.6 3.3E-15 7.1E-20 124.4 5.3 63 35-97 5-77 (508)
32 TIGR02349 DnaJ_bact chaperone 99.6 4.4E-15 9.5E-20 121.1 5.8 60 39-98 1-68 (354)
33 PRK14292 chaperone protein Dna 99.6 4.6E-15 9.9E-20 121.8 5.6 61 38-98 2-70 (371)
34 PRK14290 chaperone protein Dna 99.6 5.3E-15 1.1E-19 121.3 5.9 60 38-97 3-72 (365)
35 PRK14300 chaperone protein Dna 99.5 5.1E-15 1.1E-19 121.7 5.5 61 38-98 3-71 (372)
36 PRK14289 chaperone protein Dna 99.5 1.1E-14 2.3E-19 120.2 6.7 61 37-97 4-73 (386)
37 PRK14293 chaperone protein Dna 99.5 8.5E-15 1.8E-19 120.4 6.0 60 38-97 3-70 (374)
38 PRK10266 curved DNA-binding pr 99.5 1.3E-14 2.8E-19 116.5 5.9 59 38-96 4-70 (306)
39 KOG0718 Molecular chaperone (D 99.5 2.1E-14 4.6E-19 119.9 4.7 65 36-100 7-83 (546)
40 PTZ00341 Ring-infected erythro 99.5 4.2E-14 9.1E-19 126.3 6.3 64 36-99 571-642 (1136)
41 smart00271 DnaJ DnaJ molecular 99.5 6.6E-14 1.4E-18 86.3 4.5 49 38-86 1-59 (60)
42 KOG0719 Molecular chaperone (D 99.5 7.4E-14 1.6E-18 108.0 4.9 64 35-98 11-85 (264)
43 KOG0624 dsRNA-activated protei 99.5 1.1E-13 2.3E-18 113.1 6.1 64 32-95 388-463 (504)
44 PHA03102 Small T antigen; Revi 99.4 7.7E-14 1.7E-18 102.3 4.6 64 38-101 5-75 (153)
45 cd06257 DnaJ DnaJ domain or J- 99.4 3.4E-13 7.3E-18 81.7 4.7 46 39-84 1-55 (55)
46 COG2214 CbpA DnaJ-class molecu 99.4 6.7E-13 1.4E-17 98.1 5.4 60 36-95 4-73 (237)
47 KOG0721 Molecular chaperone (D 99.3 1.7E-12 3.8E-17 99.4 5.9 64 36-99 97-169 (230)
48 TIGR03835 termin_org_DnaJ term 99.3 1.6E-12 3.4E-17 114.2 6.3 62 38-99 2-71 (871)
49 PRK01356 hscB co-chaperone Hsc 99.3 3.4E-12 7.4E-17 94.7 6.6 60 38-97 2-75 (166)
50 PRK05014 hscB co-chaperone Hsc 99.3 4.8E-12 1E-16 94.3 5.9 60 38-97 1-76 (171)
51 PRK00294 hscB co-chaperone Hsc 99.2 2.1E-11 4.5E-16 91.1 6.4 62 36-97 2-79 (173)
52 PRK03578 hscB co-chaperone Hsc 99.2 2.3E-11 4.9E-16 91.2 6.4 61 37-97 5-81 (176)
53 KOG0720 Molecular chaperone (D 99.1 4.4E-11 9.6E-16 99.9 4.4 61 37-97 234-302 (490)
54 PTZ00100 DnaJ chaperone protei 99.1 1.5E-10 3.2E-15 81.4 4.4 47 37-83 64-115 (116)
55 KOG0722 Molecular chaperone (D 99.1 4.2E-11 9.1E-16 94.1 1.7 68 34-101 29-104 (329)
56 KOG0714 Molecular chaperone (D 99.0 4.5E-10 9.7E-15 86.7 4.7 64 37-100 2-75 (306)
57 PHA02624 large T antigen; Prov 99.0 4.8E-10 1E-14 97.2 3.7 55 37-91 10-71 (647)
58 PRK01773 hscB co-chaperone Hsc 98.9 1.7E-09 3.6E-14 80.9 5.8 60 37-96 1-76 (173)
59 KOG0550 Molecular chaperone (D 98.9 9.8E-10 2.1E-14 91.4 4.0 65 32-96 367-441 (486)
60 COG5407 SEC63 Preprotein trans 98.7 7.2E-09 1.6E-13 87.0 4.0 61 37-97 97-171 (610)
61 PRK09430 djlA Dna-J like membr 98.7 4.7E-09 1E-13 83.2 2.5 48 37-84 199-262 (267)
62 COG5269 ZUO1 Ribosome-associat 98.6 2.6E-08 5.6E-13 79.3 4.2 66 36-101 41-120 (379)
63 TIGR00714 hscB Fe-S protein as 98.5 2.7E-07 5.9E-12 67.9 5.9 48 50-97 3-64 (157)
64 KOG1150 Predicted molecular ch 98.4 2.9E-07 6.2E-12 70.4 4.9 60 34-93 49-118 (250)
65 KOG0568 Molecular chaperone (D 97.9 1.7E-05 3.6E-10 62.2 4.4 80 37-116 46-149 (342)
66 KOG0723 Molecular chaperone (D 97.7 7.2E-05 1.6E-09 51.8 4.3 44 41-84 59-107 (112)
67 KOG3192 Mitochondrial J-type c 97.6 4.8E-05 1.1E-09 56.0 3.0 63 35-97 5-83 (168)
68 KOG1789 Endocytosis protein RM 97.5 0.00013 2.7E-09 67.4 4.1 47 37-83 1280-1336(2235)
69 COG1076 DjlA DnaJ-domain-conta 93.7 0.042 9.1E-07 40.8 1.9 39 58-96 28-75 (174)
70 PF03656 Pam16: Pam16; InterP 90.7 0.42 9.2E-06 34.1 3.9 47 40-86 60-111 (127)
71 COG1076 DjlA DnaJ-domain-conta 89.7 0.15 3.2E-06 37.9 0.9 45 38-82 113-173 (174)
72 PF07709 SRR: Seven Residue Re 63.1 6.8 0.00015 17.1 1.5 13 71-83 2-14 (14)
73 KOG0431 Auxilin-like protein a 58.3 9.5 0.00021 32.7 2.8 18 50-67 400-422 (453)
74 PF13446 RPT: A repeated domai 57.8 16 0.00035 22.1 3.1 39 39-83 6-48 (62)
75 KOG0724 Zuotin and related mol 47.0 18 0.00038 29.2 2.6 35 58-92 17-59 (335)
76 PF11833 DUF3353: Protein of u 34.7 79 0.0017 24.0 4.3 38 47-84 1-40 (194)
77 PF10041 DUF2277: Uncharacteri 30.5 61 0.0013 21.2 2.6 25 37-61 2-27 (78)
78 PF14687 DUF4460: Domain of un 23.0 1E+02 0.0022 21.3 2.8 12 58-69 19-30 (112)
79 PRK13798 putative OHCU decarbo 20.8 1.8E+02 0.0039 21.4 3.9 32 49-80 58-109 (166)
80 PF12725 DUF3810: Protein of u 20.5 1.3E+02 0.0028 24.5 3.4 48 37-84 81-148 (318)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=2.1e-21 Score=158.69 Aligned_cols=64 Identities=39% Similarity=0.591 Sum_probs=59.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC----ChHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG----NGRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
.+|||+||||+++|+.+|||+ |++||||+|+ ++++|++|++||+||+||++|+.||+++.....
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~ 75 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK 75 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence 679999999999999999999 9999999999 357999999999999999999999999988654
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=5.3e-20 Score=147.98 Aligned_cols=67 Identities=34% Similarity=0.515 Sum_probs=61.6
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh----HHHHHHHHHHHHcCChhHHHHHHhhcccccCCC
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG----RDFTEIHNTYETLLDPKAKAVYDMSLVSRRRTR 102 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~----~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~~ 102 (131)
..+|||+||||+++|+..|||+ |+++|||+|+++ +.|++|+.||+||+||++|+.||.+|.++....
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~ 89 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDE 89 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccc
Confidence 4689999999999999999999 999999999954 699999999999999999999999998766543
No 3
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=5.8e-18 Score=137.05 Aligned_cols=64 Identities=38% Similarity=0.621 Sum_probs=59.9
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-HHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-RDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
+..||+||||+++|+.+|||+ ++++|||||++. ++|++|+.||+||+||++|++||+++.++.+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~ 72 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQ 72 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhc
Confidence 568999999999999999999 999999999965 7999999999999999999999999988663
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=1.1e-17 Score=137.31 Aligned_cols=61 Identities=36% Similarity=0.501 Sum_probs=56.7
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC----ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG----NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++|+.+|||+ |+++|||+++ ++++|++|++||+||+||++|+.||+++..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~ 71 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence 369999999999999999999 9999999987 347999999999999999999999998865
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.2e-17 Score=135.71 Aligned_cols=61 Identities=36% Similarity=0.525 Sum_probs=56.6
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++|+.+|||+ |+++|||+++ ++++|++|++||+||+||++|+.||.++..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 469999999999999999999 9999999986 347999999999999999999999998865
No 6
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.69 E-value=2.4e-17 Score=137.50 Aligned_cols=62 Identities=40% Similarity=0.591 Sum_probs=58.5
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ |+++|||++++.++|++|++||+||+||.+|+.||.++..+
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~ 93 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEG 93 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchh
Confidence 469999999999999999999 99999999988899999999999999999999999988653
No 7
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=9e-17 Score=132.09 Aligned_cols=62 Identities=37% Similarity=0.538 Sum_probs=57.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||+||+||.+|+.||+++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchh
Confidence 469999999999999999999 99999999873 479999999999999999999999988653
No 8
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=9.5e-17 Score=132.79 Aligned_cols=60 Identities=28% Similarity=0.465 Sum_probs=56.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||+||+||++|+.||+++.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 469999999999999999999 99999999873 4799999999999999999999999874
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.8e-16 Score=130.54 Aligned_cols=62 Identities=32% Similarity=0.521 Sum_probs=57.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||+++..+
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAG 73 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccc
Confidence 569999999999999999999 99999999863 469999999999999999999999988653
No 10
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=3.7e-16 Score=128.28 Aligned_cols=62 Identities=39% Similarity=0.592 Sum_probs=56.9
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 469999999999999999999 99999999873 369999999999999999999999988654
No 11
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.2e-16 Score=128.77 Aligned_cols=62 Identities=39% Similarity=0.672 Sum_probs=56.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~ 72 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTD 72 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcc
Confidence 469999999999999999999 99999999863 469999999999999999999999988653
No 12
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.2e-16 Score=129.10 Aligned_cols=62 Identities=35% Similarity=0.616 Sum_probs=57.1
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||++++ +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~ 72 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcc
Confidence 469999999999999999999 99999999863 579999999999999999999999988653
No 13
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.8e-16 Score=128.52 Aligned_cols=62 Identities=37% Similarity=0.555 Sum_probs=57.2
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++ ++++|++|++||+||+||.+|+.||.++..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 579999999999999999999 9999999986 4579999999999999999999999987653
No 14
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=5.9e-16 Score=127.76 Aligned_cols=62 Identities=44% Similarity=0.665 Sum_probs=56.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 469999999999999999999 99999999873 369999999999999999999999988653
No 15
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=6.5e-16 Score=127.39 Aligned_cols=62 Identities=39% Similarity=0.652 Sum_probs=57.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.++||+ ++++|||++++ .++|++|++||+||+||.+|+.||.++..+
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 469999999999999999999 99999999863 579999999999999999999999988653
No 16
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=5.5e-16 Score=127.20 Aligned_cols=60 Identities=35% Similarity=0.495 Sum_probs=56.0
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||+||+||.+|..||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~ 71 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT 71 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence 69999999999999999999 99999999873 36999999999999999999999998765
No 17
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.61 E-value=5.6e-16 Score=97.15 Aligned_cols=54 Identities=41% Similarity=0.730 Sum_probs=50.6
Q ss_pred CcccccccCCCCCHHHHHH-----HHHhCCCCCCC-h----HHHHHHHHHHHHcCChhHHHHHH
Q 038518 39 SLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-G----RDFTEIHNTYETLLDPKAKAVYD 92 (131)
Q Consensus 39 ~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-~----~~f~~i~~Ay~vL~dp~~R~~YD 92 (131)
|||+||||+++++.++||+ ++++|||++.. . +.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999 99999999664 3 59999999999999999999998
No 18
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.1e-16 Score=126.92 Aligned_cols=62 Identities=39% Similarity=0.585 Sum_probs=57.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++ ++++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 369999999999999999999 9999999986 3579999999999999999999999988653
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.6e-16 Score=122.89 Aligned_cols=61 Identities=34% Similarity=0.609 Sum_probs=56.6
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++|+.+|||+ ++++|||+++ ++++|++|++||++|+||.+|+.||.++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 469999999999999999999 9999999986 347999999999999999999999998865
No 20
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=1.4e-15 Score=125.82 Aligned_cols=61 Identities=33% Similarity=0.488 Sum_probs=56.2
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
.|||+||||+++|+.+|||+ ++++|||++++ +++|++|++||+||+||.+|+.||+++..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 38999999999999999999 99999999873 469999999999999999999999988653
No 21
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=6.7e-16 Score=127.20 Aligned_cols=62 Identities=40% Similarity=0.573 Sum_probs=56.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 369999999999999999999 99999999873 469999999999999999999999988653
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1e-15 Score=125.57 Aligned_cols=62 Identities=37% Similarity=0.544 Sum_probs=57.2
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g 73 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEG 73 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccc
Confidence 469999999999999999999 99999999873 469999999999999999999999988653
No 23
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.6e-16 Score=126.26 Aligned_cols=60 Identities=33% Similarity=0.532 Sum_probs=55.9
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||+++|+.+|||+ ++++|||++++ +++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 69999999999999999999 99999999874 36999999999999999999999998754
No 24
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1.2e-15 Score=126.18 Aligned_cols=61 Identities=38% Similarity=0.531 Sum_probs=55.7
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHh----hccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDM----SLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~----~~~~ 97 (131)
..|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||+ ++..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 469999999999999999999 99999999873 4799999999999999999999998 6643
No 25
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1e-15 Score=125.90 Aligned_cols=62 Identities=37% Similarity=0.508 Sum_probs=56.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.++||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g 73 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAG 73 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccc
Confidence 469999999999999999999 99999999873 369999999999999999999999988653
No 26
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.4e-15 Score=121.41 Aligned_cols=61 Identities=41% Similarity=0.677 Sum_probs=57.7
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
.|||+||||+++|+..|||+ ++++|||.+.+ +++|++|.+||+||+|+++|..||..+..+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 39999999999999999999 99999999884 469999999999999999999999999886
No 27
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=2e-15 Score=120.74 Aligned_cols=65 Identities=34% Similarity=0.516 Sum_probs=60.3
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh----HHHHHHHHHHHHcCChhHHHHHHhhcccccCC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG----RDFTEIHNTYETLLDPKAKAVYDMSLVSRRRT 101 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~----~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~ 101 (131)
..|||+||||+.+++..+|++ ++++|||||+++ ++|+.|.+||+||+|+..|..||..+..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 679999999999999999999 999999999954 69999999999999999999999999876544
No 28
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.8e-15 Score=125.31 Aligned_cols=61 Identities=34% Similarity=0.492 Sum_probs=56.4
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
.|||+||||+++|+.+|||+ ++++|||+++. +++|++|++||+||+||.+|+.||.++..+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~ 72 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG 72 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence 69999999999999999999 99999999874 479999999999999999999999987653
No 29
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=2.4e-15 Score=123.48 Aligned_cols=62 Identities=40% Similarity=0.600 Sum_probs=56.7
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||++|+||.+|+.||.++..+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 469999999999999999999 99999999873 369999999999999999999999987653
No 30
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.3e-15 Score=118.26 Aligned_cols=63 Identities=41% Similarity=0.585 Sum_probs=57.7
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh----HHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG----RDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~----~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
..|+|+||||+++++.++||+ ++++|||+++++ ++|++||+||+||+||.+|..||.+|..+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 568999999999999999999 999999998863 699999999999999999999999977643
No 31
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=3.3e-15 Score=124.37 Aligned_cols=63 Identities=40% Similarity=0.546 Sum_probs=58.1
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..++.||+||||.++++..+||+ |+++|||+++. +++|+.|+.||+|||||..|+.||.+...
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 45779999999999999999999 99999999884 47999999999999999999999988774
No 32
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.56 E-value=4.4e-15 Score=121.13 Aligned_cols=60 Identities=42% Similarity=0.617 Sum_probs=55.6
Q ss_pred CcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 39 SLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 39 ~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
|||+||||+++|+.++||+ ++++|||+++ ++++|++|++||+||+|+.+|..||.++..+
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~ 68 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAG 68 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccc
Confidence 7999999999999999999 9999999986 3479999999999999999999999988664
No 33
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.6e-15 Score=121.81 Aligned_cols=61 Identities=34% Similarity=0.519 Sum_probs=56.3
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
.|||+||||+++|+.++||+ ++++|||++++ +++|++|++||+||+||.+|+.||.++..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 58999999999999999998 99999999973 479999999999999999999999988653
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.3e-15 Score=121.31 Aligned_cols=60 Identities=37% Similarity=0.626 Sum_probs=55.7
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 59999999999999999999 99999999863 36999999999999999999999998764
No 35
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.1e-15 Score=121.71 Aligned_cols=61 Identities=33% Similarity=0.565 Sum_probs=56.1
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
.|||+||||+++|+.+|||+ ++++|||+++ ++++|++|++||++|+|+.+|..||.++..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 59999999999999999999 9999999986 3469999999999999999999999987653
No 36
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=1.1e-14 Score=120.20 Aligned_cols=61 Identities=38% Similarity=0.578 Sum_probs=56.4
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||++|+||.+|+.||.++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 469999999999999999999 99999999873 36999999999999999999999998764
No 37
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=8.5e-15 Score=120.44 Aligned_cols=60 Identities=38% Similarity=0.623 Sum_probs=55.8
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||+++++.+|||+ ++++|||+++ ++++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 59999999999999999999 9999999986 347999999999999999999999998764
No 38
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.52 E-value=1.3e-14 Score=116.47 Aligned_cols=59 Identities=34% Similarity=0.603 Sum_probs=55.1
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
.|||+||||+++++.+|||+ ++++|||+++ ++++|++|++||++|+||.+|+.||.++.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 69999999999999999999 9999999986 45799999999999999999999999764
No 39
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=2.1e-14 Score=119.87 Aligned_cols=65 Identities=32% Similarity=0.529 Sum_probs=59.1
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCC-------ChHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG-------NGRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~-------~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
.+.+||.+|+|+++|+.+|||+ ++.+||||.. +++.|+.|++|||||+||.+|++||.+|..+-.
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 3569999999999999999999 9999999976 346999999999999999999999999988664
No 40
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.48 E-value=4.2e-14 Score=126.33 Aligned_cols=64 Identities=25% Similarity=0.341 Sum_probs=58.9
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
...+||+||||+++|+..+||+ |+++|||+++. .++|+.|++||+||+||.+|+.||.+|..+.
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl 642 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI 642 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhcccccc
Confidence 4679999999999999999999 99999999873 4699999999999999999999999988754
No 41
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.47 E-value=6.6e-14 Score=86.34 Aligned_cols=49 Identities=43% Similarity=0.704 Sum_probs=45.3
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCC-----ChHHHHHHHHHHHHcCChh
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSG-----NGRDFTEIHNTYETLLDPK 86 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~-----~~~~f~~i~~Ay~vL~dp~ 86 (131)
.|||+||||+++++.++||+ ++++|||++. +.+.|.+|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999 9999999988 3479999999999999985
No 42
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=7.4e-14 Score=108.04 Aligned_cols=64 Identities=36% Similarity=0.489 Sum_probs=57.6
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCC------ChHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG------NGRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~------~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
+...|+|+||||.++|+..+|++ ++++|||+++ +.++|++|+.||.||+|.++|+.||..|.-.
T Consensus 11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id 85 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID 85 (264)
T ss_pred ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence 44569999999999999999999 9999999996 3469999999999999999999999987543
No 43
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.45 E-value=1.1e-13 Score=113.14 Aligned_cols=64 Identities=27% Similarity=0.443 Sum_probs=57.3
Q ss_pred cccCCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-------HHHHHHHHHHHHcCChhHHHHHHhhc
Q 038518 32 MALGTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-------RDFTEIHNTYETLLDPKAKAVYDMSL 95 (131)
Q Consensus 32 ~~~~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-------~~f~~i~~Ay~vL~dp~~R~~YD~~~ 95 (131)
...+..+|||+||||.++|+..||.+ +.++|||...++ .+|..|..|-+||+||++|+.||+..
T Consensus 388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGe 463 (504)
T KOG0624|consen 388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGE 463 (504)
T ss_pred HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCC
Confidence 34457899999999999999999988 999999998754 49999999999999999999999854
No 44
>PHA03102 Small T antigen; Reviewed
Probab=99.45 E-value=7.7e-14 Score=102.32 Aligned_cols=64 Identities=14% Similarity=0.250 Sum_probs=58.9
Q ss_pred cCcccccccCCCC--CHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHHHhhcccccCC
Q 038518 38 GSLYEVLRVEPKA--TISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVYDMSLVSRRRT 101 (131)
Q Consensus 38 ~~~Y~iLgv~~~a--~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~ 101 (131)
..+|+||||+++| +.++||+ ++++|||+++++++|++|++||++|+|+.+|..||.++......
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~ 75 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSE 75 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccccccCCccccc
Confidence 3569999999999 9999999 99999999999999999999999999999999999998775543
No 45
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.41 E-value=3.4e-13 Score=81.68 Aligned_cols=46 Identities=43% Similarity=0.717 Sum_probs=43.0
Q ss_pred CcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCC
Q 038518 39 SLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLD 84 (131)
Q Consensus 39 ~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~d 84 (131)
|||+||||+++++.++||+ ++++|||++.. .+.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999 99999999884 5799999999999986
No 46
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=6.7e-13 Score=98.06 Aligned_cols=60 Identities=42% Similarity=0.633 Sum_probs=55.2
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSL 95 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 95 (131)
...+||+||||.++++..||++ ++++|||+++. .+.|..|++||++|+|+.+|..||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 3579999999999999999998 99999999883 379999999999999999999999863
No 47
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=1.7e-12 Score=99.42 Aligned_cols=64 Identities=28% Similarity=0.432 Sum_probs=58.0
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCC----ChHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG----NGRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
..-|+||||||+++++..|||+ ++++||||++ +++.|..|.+||+.|+|+..|..|..++..-.
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 3569999999999999999999 9999999975 45699999999999999999999999987644
No 48
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.34 E-value=1.6e-12 Score=114.20 Aligned_cols=62 Identities=37% Similarity=0.507 Sum_probs=56.3
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
.|||+||||+++|+.++||+ ++++|||++++ .++|++|++||++|+||.+|..||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 59999999999999999999 99999999874 3589999999999999999999999876543
No 49
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.33 E-value=3.4e-12 Score=94.75 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=52.6
Q ss_pred cCcccccccCCC--CCHHHHHH-----HHHhCCCCCCCh-------HHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGNG-------RDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~~-------~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||++. ++..+|++ ++++|||+..+. +.+..|++||+||+||.+|+.|+..+.+
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~g 75 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQN 75 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHccC
Confidence 589999999997 68899999 999999998642 2578999999999999999999988753
No 50
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.29 E-value=4.8e-12 Score=94.33 Aligned_cols=60 Identities=22% Similarity=0.401 Sum_probs=52.0
Q ss_pred cCcccccccCCC--CCHHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 38 GSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 38 ~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.|||+||||++. ++..+|++ ++++|||+..+ .+.|..||+||++|+||.+|..|+..+.+
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~g 76 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLHG 76 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhcC
Confidence 389999999996 67889988 99999999653 24789999999999999999999976653
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.23 E-value=2.1e-11 Score=91.14 Aligned_cols=62 Identities=21% Similarity=0.410 Sum_probs=54.1
Q ss_pred CccCcccccccCCC--CCHHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 36 TRGSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
+..|||++|||++. .+..+|++ ++++|||+... .+.+..||+||+||+||.+|+.|+..+.+
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~g 79 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALSG 79 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcC
Confidence 46799999999998 56799999 99999999763 24799999999999999999999987764
No 52
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.23 E-value=2.3e-11 Score=91.15 Aligned_cols=61 Identities=20% Similarity=0.329 Sum_probs=52.4
Q ss_pred ccCcccccccCCC--CCHHHHHH-----HHHhCCCCCCCh---------HHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGNG---------RDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~~---------~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||++. ++..+|++ ++++|||+.... +.+..||+||++|+||.+|..|+..+.+
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G 81 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRG 81 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcC
Confidence 4799999999986 67889988 999999997631 3568999999999999999999976653
No 53
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=4.4e-11 Score=99.89 Aligned_cols=61 Identities=21% Similarity=0.369 Sum_probs=56.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|+|.+|||+.+++.++||+ |...|||||. ++|.|+.|..||++|+|+++|..||..+..
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 779999999999999999999 9999999988 468999999999999999999999987654
No 54
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.07 E-value=1.5e-10 Score=81.41 Aligned_cols=47 Identities=23% Similarity=0.443 Sum_probs=44.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLL 83 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~ 83 (131)
..++|+||||+++++.+||++ ++++|||++++.+.|.+|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999998 99999999888899999999999985
No 55
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=4.2e-11 Score=94.14 Aligned_cols=68 Identities=31% Similarity=0.433 Sum_probs=60.7
Q ss_pred cCCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh---HHHHHHHHHHHHcCChhHHHHHHhhcccccCC
Q 038518 34 LGTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG---RDFTEIHNTYETLLDPKAKAVYDMSLVSRRRT 101 (131)
Q Consensus 34 ~~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~---~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~ 101 (131)
-++..|+|+||||.++++..||.+ ++++|||++.+. +.|+.|.+||++|.|.+.|..||-.+......
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldhpd~~ 104 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDHPDEV 104 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcCchHH
Confidence 356789999999999999999999 999999998854 58999999999999999999999988775543
No 56
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=4.5e-10 Score=86.69 Aligned_cols=64 Identities=33% Similarity=0.524 Sum_probs=57.1
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-----HHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-----RDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-----~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
+.|+|+||+|.++++..+|++ ++++|||+++.. .+|.+|.+||++|+|+.+|..||.++.+...
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~ 75 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLK 75 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccc
Confidence 468999999999999999999 999999997754 3799999999999999999999999985443
No 57
>PHA02624 large T antigen; Provisional
Probab=98.95 E-value=4.8e-10 Score=97.21 Aligned_cols=55 Identities=22% Similarity=0.410 Sum_probs=52.5
Q ss_pred ccCcccccccCCCC--CHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHH
Q 038518 37 RGSLYEVLRVEPKA--TISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVY 91 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a--~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~Y 91 (131)
..++|+||||++++ +.++||+ ++++|||++++.++|++|++||++|+|+.++..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhc
Confidence 45889999999999 9999999 9999999999999999999999999999999998
No 58
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.94 E-value=1.7e-09 Score=80.92 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=52.3
Q ss_pred ccCcccccccCCC--CCHHHHHH-----HHHhCCCCCCCh---------HHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 37 RGSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGNG---------RDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 37 ~~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~~---------~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
+.|||++|||++. .+..++++ .+++|||+.... +....||+||.+|+||.+|+.|-..+.
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 3599999999987 78888887 999999997532 378999999999999999999998776
No 59
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=9.8e-10 Score=91.36 Aligned_cols=65 Identities=29% Similarity=0.474 Sum_probs=57.5
Q ss_pred cccCCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-----HHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 32 MALGTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-----RDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 32 ~~~~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-----~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
...+.-+|||.||||.++++..|||+ ++.+|||++..+ .+|+++.+||.+|+||.+|..||..-.
T Consensus 367 LkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~d 441 (486)
T KOG0550|consen 367 LKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQD 441 (486)
T ss_pred HHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccc
Confidence 34456789999999999999999999 999999998854 499999999999999999999997543
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.75 E-value=7.2e-09 Score=87.05 Aligned_cols=61 Identities=23% Similarity=0.353 Sum_probs=55.7
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.-|+||||||+.+++..+||+ +.++||||.+. ++.+++|++||+.|+|...|+.|-.+|.-
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 459999999999999999999 89999999874 36999999999999999999999998764
No 61
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.74 E-value=4.7e-09 Score=83.16 Aligned_cols=48 Identities=29% Similarity=0.316 Sum_probs=43.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCC-----------ChHHHHHHHHHHHHcCC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG-----------NGRDFTEIHNTYETLLD 84 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~-----------~~~~f~~i~~Ay~vL~d 84 (131)
..++|+||||+++++.++||+ ++++|||+.. ++++|++|++||++|+.
T Consensus 199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999 9999999953 23699999999999985
No 62
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=2.6e-08 Score=79.27 Aligned_cols=66 Identities=27% Similarity=0.329 Sum_probs=54.8
Q ss_pred CccCcccccccCC---CCCHHHHHH-----HHHhCCCCCC------ChHHHHHHHHHHHHcCChhHHHHHHhhcccccCC
Q 038518 36 TRGSLYEVLRVEP---KATISEIKT-----AKVYHPDLSG------NGRDFTEIHNTYETLLDPKAKAVYDMSLVSRRRT 101 (131)
Q Consensus 36 ~~~~~Y~iLgv~~---~a~~~eIk~-----a~~~HPDk~~------~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~ 101 (131)
+..|+|.+|||+. .++..+|.+ +.++|||+.. .++.|..|+.||+||+|+.+|..||........+
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~advp 120 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDADVP 120 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccccCCC
Confidence 3579999999985 467777777 8999999974 3579999999999999999999999877665433
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.50 E-value=2.7e-07 Score=67.90 Aligned_cols=48 Identities=29% Similarity=0.462 Sum_probs=40.5
Q ss_pred CCHHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 50 ATISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 50 a~~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
.+..+|++ ++++|||+..+ .+.+..||+||++|+||.+|+.|+..+.+
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~g 64 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLHG 64 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcC
Confidence 45677877 99999998542 25899999999999999999999988864
No 64
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.44 E-value=2.9e-07 Score=70.44 Aligned_cols=60 Identities=23% Similarity=0.352 Sum_probs=52.6
Q ss_pred cCCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-----HHHHHHHHHHHHcCChhHHHHHHh
Q 038518 34 LGTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-----RDFTEIHNTYETLLDPKAKAVYDM 93 (131)
Q Consensus 34 ~~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-----~~f~~i~~Ay~vL~dp~~R~~YD~ 93 (131)
.+-+.|+|+||.|.|..+.++||+ ++..|||+|+++ ..|.-|.+||.+|-|+..|...+.
T Consensus 49 tyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~ 118 (250)
T KOG1150|consen 49 TYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLD 118 (250)
T ss_pred cccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 445789999999999999999999 889999999965 489999999999999987766543
No 65
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=1.7e-05 Score=62.25 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=60.8
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHH-HcCC--------------hhHHHHHHh
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYE-TLLD--------------PKAKAVYDM 93 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~-vL~d--------------p~~R~~YD~ 93 (131)
-..||.||||..+|+..+++. ++++|||.+.. .+.|.+|.+||. ||+. ++--..||-
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~~~ktn~~qn~~edee~~~efdi 125 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEKFAKTNARQNIGEDEEDAEEFDI 125 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHhhh
Confidence 457899999999999999999 99999999773 469999999998 7754 223344665
Q ss_pred hcccccCCCccCCCCCCCC-CCCC
Q 038518 94 SLVSRRRTRTTSFGCSGRS-GFHP 116 (131)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~ 116 (131)
.....+.+.+-++.+-|+| .++.
T Consensus 126 k~kapqhrhyls~egig~gtp~qr 149 (342)
T KOG0568|consen 126 KHKAPQHRHYLSFEGIGFGTPFQR 149 (342)
T ss_pred ccCCchhhhhhcccCcccCCchHH
Confidence 5556667777777776665 4444
No 66
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=7.2e-05 Score=51.83 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=40.8
Q ss_pred ccccccCCCCCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCC
Q 038518 41 YEVLRVEPKATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLD 84 (131)
Q Consensus 41 Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~d 84 (131)
-.||||+++++.+.||+ ....|||+..+.-.-.+||||+++|..
T Consensus 59 ~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAsKINEAKdlLe~ 107 (112)
T KOG0723|consen 59 ALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLASKINEAKDLLEG 107 (112)
T ss_pred HHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHhc
Confidence 47999999999999999 889999999999999999999999875
No 67
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.61 E-value=4.8e-05 Score=56.02 Aligned_cols=63 Identities=29% Similarity=0.544 Sum_probs=48.2
Q ss_pred CCccCcccccccCCC--CCHHHHH-H----HHHhCCCCCC---------ChHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 35 GTRGSLYEVLRVEPK--ATISEIK-T----AKVYHPDLSG---------NGRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~--a~~~eIk-~----a~~~HPDk~~---------~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
....+||.++|.... ..+..++ . .+++|||+.. +.+...+|++||.+|+||-.|+.|=..+..
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g 83 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKG 83 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 346789999986543 3444444 2 9999999954 346899999999999999999999866544
No 68
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.46 E-value=0.00013 Score=67.37 Aligned_cols=47 Identities=28% Similarity=0.418 Sum_probs=39.6
Q ss_pred ccCcccccccCCC----CCHHHHHH-----HHHhCCCCCC-ChHHHHHHHHHHHHcC
Q 038518 37 RGSLYEVLRVEPK----ATISEIKT-----AKVYHPDLSG-NGRDFTEIHNTYETLL 83 (131)
Q Consensus 37 ~~~~Y~iLgv~~~----a~~~eIk~-----a~~~HPDk~~-~~~~f~~i~~Ay~vL~ 83 (131)
..+-|+||.|+-+ -..++||+ +.+||||||+ ..++|..+++||+.|+
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLS 1336 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Confidence 3467999999843 34477888 9999999999 5689999999999998
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=93.69 E-value=0.042 Score=40.82 Aligned_cols=39 Identities=36% Similarity=0.661 Sum_probs=33.8
Q ss_pred HHHhCCCCCCCh---------HHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 58 AKVYHPDLSGNG---------RDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 58 a~~~HPDk~~~~---------~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
.+.+|||+.... +.+..++.||.+|.||..|..|=....
T Consensus 28 ~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 28 QRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred HHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 999999997732 488999999999999999999976665
No 70
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=90.73 E-value=0.42 Score=34.11 Aligned_cols=47 Identities=19% Similarity=0.189 Sum_probs=34.8
Q ss_pred cccccccCCCCCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChh
Q 038518 40 LYEVLRVEPKATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPK 86 (131)
Q Consensus 40 ~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~ 86 (131)
-.+||||++..+.++|.+ -...+|+++++.-.-.+|..|.+.|....
T Consensus 60 A~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 60 ARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 369999999999999999 77888999988888888999999887544
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=89.75 E-value=0.15 Score=37.88 Aligned_cols=45 Identities=33% Similarity=0.454 Sum_probs=37.7
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----------hHHHHHHHHHHHHc
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----------GRDFTEIHNTYETL 82 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----------~~~f~~i~~Ay~vL 82 (131)
.+.|.+||+.......+|++ ....|||+..+ .+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999 78889998542 35888899998753
No 72
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=63.14 E-value=6.8 Score=17.13 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHcC
Q 038518 71 DFTEIHNTYETLL 83 (131)
Q Consensus 71 ~f~~i~~Ay~vL~ 83 (131)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788999998874
No 73
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=58.29 E-value=9.5 Score=32.68 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=15.7
Q ss_pred CCHHHHHH-----HHHhCCCCCC
Q 038518 50 ATISEIKT-----AKVYHPDLSG 67 (131)
Q Consensus 50 a~~~eIk~-----a~~~HPDk~~ 67 (131)
.+.++||+ .+..||||..
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlq 422 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQ 422 (453)
T ss_pred cCHHHHHHHHHhhhheeCccccc
Confidence 57888998 8999999966
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=57.78 E-value=16 Score=22.07 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=25.5
Q ss_pred CcccccccCCCCCHHHHHH----HHHhCCCCCCChHHHHHHHHHHHHcC
Q 038518 39 SLYEVLRVEPKATISEIKT----AKVYHPDLSGNGRDFTEIHNTYETLL 83 (131)
Q Consensus 39 ~~Y~iLgv~~~a~~~eIk~----a~~~HPDk~~~~~~f~~i~~Ay~vL~ 83 (131)
+-|++|||+++.+.+.|.. .....| .....+.+|..++.
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~~~P------~~~~~~r~AL~~Ia 48 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVNDDP------SQKDTLREALRVIA 48 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHHcCh------HhHHHHHHHHHHHH
Confidence 4599999999999988887 222222 23444566666554
No 75
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=47.03 E-value=18 Score=29.19 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=24.0
Q ss_pred HHHhCCCCCC--------ChHHHHHHHHHHHHcCChhHHHHHH
Q 038518 58 AKVYHPDLSG--------NGRDFTEIHNTYETLLDPKAKAVYD 92 (131)
Q Consensus 58 a~~~HPDk~~--------~~~~f~~i~~Ay~vL~dp~~R~~YD 92 (131)
++..||++.. .++.+++|.+||.||++...|...|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~ 59 (335)
T KOG0724|consen 17 ALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPD 59 (335)
T ss_pred hhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchh
Confidence 6677777652 3457899999999998754443433
No 76
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=34.69 E-value=79 Score=23.97 Aligned_cols=38 Identities=21% Similarity=0.390 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHHHHhCCCC-CCChHHHHHHHHHHHH-cCC
Q 038518 47 EPKATISEIKTAKVYHPDL-SGNGRDFTEIHNTYET-LLD 84 (131)
Q Consensus 47 ~~~a~~~eIk~a~~~HPDk-~~~~~~f~~i~~Ay~v-L~d 84 (131)
+++|+.+||.+|+..-=.. ..+++.-.+|..||+. |++
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDEKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4689999999933332222 4456688889999984 443
No 77
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=30.53 E-value=61 Score=21.19 Aligned_cols=25 Identities=32% Similarity=0.371 Sum_probs=19.6
Q ss_pred ccCcccccccCCCCCHHHHHH-HHHh
Q 038518 37 RGSLYEVLRVEPKATISEIKT-AKVY 61 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-a~~~ 61 (131)
++|--.+.|+.|-++.+||.. +++|
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQy 27 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQY 27 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHH
Confidence 455567788999999999999 5554
No 78
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=22.98 E-value=1e+02 Score=21.30 Aligned_cols=12 Identities=42% Similarity=0.526 Sum_probs=9.6
Q ss_pred HHHhCCCCCCCh
Q 038518 58 AKVYHPDLSGNG 69 (131)
Q Consensus 58 a~~~HPDk~~~~ 69 (131)
-++.|||...+.
T Consensus 19 y~~VHPDlF~~~ 30 (112)
T PF14687_consen 19 YFAVHPDLFGQH 30 (112)
T ss_pred HHHhCCcccccC
Confidence 889999986644
No 79
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=20.81 E-value=1.8e+02 Score=21.43 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=23.0
Q ss_pred CCCHHHHHHHHHhCCCCCCC--------------------hHHHHHHHHHHH
Q 038518 49 KATISEIKTAKVYHPDLSGN--------------------GRDFTEIHNTYE 80 (131)
Q Consensus 49 ~a~~~eIk~a~~~HPDk~~~--------------------~~~f~~i~~Ay~ 80 (131)
.++.+++..++..|||-... .+.|..+|.+|+
T Consensus 58 ~~~~~~~~~~l~~HP~lg~~~~~~~S~~EQ~gl~~l~~~~~~~l~~lN~~Y~ 109 (166)
T PRK13798 58 GLSEADIDEALAGHPRIGERPASKASAREQAGVADADEAVMAALAAGNRAYE 109 (166)
T ss_pred cCCHHHHHHHHHhCCcccCccccccCHHHhcccccCCHHHHHHHHHHHHHHH
Confidence 45666666699999998751 137888888886
No 80
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=20.50 E-value=1.3e+02 Score=24.45 Aligned_cols=48 Identities=29% Similarity=0.385 Sum_probs=34.3
Q ss_pred ccCcccccccCC-CCCHHHHHH------------HHHhCCCCCC-------ChHHHHHHHHHHHHcCC
Q 038518 37 RGSLYEVLRVEP-KATISEIKT------------AKVYHPDLSG-------NGRDFTEIHNTYETLLD 84 (131)
Q Consensus 37 ~~~~Y~iLgv~~-~a~~~eIk~------------a~~~HPDk~~-------~~~~f~~i~~Ay~vL~d 84 (131)
..++++-||++. ..+.+|+++ ..+.++|... ..+.++++.++|+.|.+
T Consensus 81 R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~~l~~ 148 (318)
T PF12725_consen 81 RPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYENLAE 148 (318)
T ss_pred CcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 446678899987 788888777 3444454432 24689999999998875
Done!