Query 038518
Match_columns 131
No_of_seqs 141 out of 1593
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 20:42:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o37_A Protein SIS1; HSP40, J- 99.8 2.3E-19 8E-24 119.9 6.1 67 36-102 6-78 (92)
2 2och_A Hypothetical protein DN 99.8 8.9E-19 3.1E-23 112.2 6.5 62 35-96 5-72 (73)
3 2dn9_A DNAJ homolog subfamily 99.8 1.5E-18 5.1E-23 112.5 6.5 64 35-98 4-76 (79)
4 2ctr_A DNAJ homolog subfamily 99.7 3.1E-18 1.1E-22 113.4 6.9 64 36-99 5-76 (88)
5 1hdj_A Human HSP40, HDJ-1; mol 99.7 3.3E-18 1.1E-22 110.5 6.7 63 37-99 2-72 (77)
6 2ej7_A HCG3 gene; HCG3 protein 99.7 3.2E-18 1.1E-22 111.7 6.2 63 36-98 7-79 (82)
7 2dmx_A DNAJ homolog subfamily 99.7 4.3E-18 1.5E-22 113.4 6.7 64 36-99 7-80 (92)
8 2ctp_A DNAJ homolog subfamily 99.7 2E-18 6.9E-23 111.7 4.9 64 35-98 4-75 (78)
9 2lgw_A DNAJ homolog subfamily 99.7 3.7E-18 1.3E-22 115.7 5.4 63 38-100 2-74 (99)
10 2yua_A Williams-beuren syndrom 99.7 6.7E-18 2.3E-22 114.2 5.7 62 36-97 15-85 (99)
11 2cug_A Mkiaa0962 protein; DNAJ 99.7 7.4E-18 2.5E-22 111.6 5.6 62 36-97 15-84 (88)
12 2ctq_A DNAJ homolog subfamily 99.7 7.6E-18 2.6E-22 116.3 5.4 66 35-100 17-91 (112)
13 1wjz_A 1700030A21RIK protein; 99.7 4.7E-18 1.6E-22 113.4 4.2 62 36-97 14-90 (94)
14 2ctw_A DNAJ homolog subfamily 99.7 2E-17 7E-22 113.7 7.5 63 36-98 15-86 (109)
15 1bq0_A DNAJ, HSP40; chaperone, 99.7 1.5E-17 5.2E-22 113.1 3.4 64 37-100 2-74 (103)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 2.8E-17 9.7E-22 112.6 4.3 64 35-98 12-88 (109)
17 2l6l_A DNAJ homolog subfamily 99.7 9.3E-17 3.2E-21 116.2 5.4 63 35-97 7-84 (155)
18 3apq_A DNAJ homolog subfamily 99.6 6E-16 2E-20 115.0 5.8 63 38-100 2-73 (210)
19 1gh6_A Large T antigen; tumor 99.6 3.1E-17 1.1E-21 114.0 -1.4 60 37-96 7-73 (114)
20 3hho_A CO-chaperone protein HS 99.6 1.3E-15 4.4E-20 112.5 4.2 61 37-97 3-79 (174)
21 2pf4_E Small T antigen; PP2A, 99.6 1.5E-16 5E-21 117.9 -1.3 60 37-96 10-76 (174)
22 2ys8_A RAB-related GTP-binding 99.6 1.2E-15 4.1E-20 101.5 2.7 55 35-89 24-86 (90)
23 1fpo_A HSC20, chaperone protei 99.5 2.5E-15 8.4E-20 110.8 3.9 59 39-97 2-76 (171)
24 1faf_A Large T antigen; J doma 99.5 1.3E-15 4.3E-20 99.3 1.6 54 38-91 11-71 (79)
25 3bvo_A CO-chaperone protein HS 99.5 5.3E-15 1.8E-19 112.1 5.1 61 36-96 41-117 (207)
26 3lz8_A Putative chaperone DNAJ 99.5 1.4E-15 4.9E-20 122.1 0.0 61 37-97 27-95 (329)
27 3uo3_A J-type CO-chaperone JAC 99.5 1.6E-14 5.5E-19 107.4 3.7 61 35-95 8-81 (181)
28 2guz_A Mitochondrial import in 99.4 1.9E-14 6.6E-19 91.7 1.4 51 38-88 14-70 (71)
29 1iur_A KIAA0730 protein; DNAJ 99.4 3.5E-14 1.2E-18 94.3 0.7 53 36-88 14-76 (88)
30 3apo_A DNAJ homolog subfamily 99.4 7E-14 2.4E-18 121.0 1.3 66 35-100 18-92 (780)
31 1n4c_A Auxilin; four helix bun 99.4 5.9E-14 2E-18 104.5 -0.1 54 38-91 117-182 (182)
32 3ag7_A Putative uncharacterize 99.3 4.8E-13 1.7E-17 91.6 1.8 49 37-86 40-104 (106)
33 2qwo_B Putative tyrosine-prote 99.2 1.3E-12 4.4E-17 87.5 0.6 47 38-84 33-91 (92)
34 2y4t_A DNAJ homolog subfamily 98.8 3.4E-09 1.2E-13 83.1 3.8 57 37-93 381-449 (450)
35 2guz_B Mitochondrial import in 98.4 2.8E-07 9.7E-12 57.7 3.4 45 40-84 6-58 (65)
36 1cf7_A Protein (transcription 23.0 47 0.0016 20.4 2.0 19 75-93 33-51 (76)
No 1
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.3e-19 Score=119.88 Aligned_cols=67 Identities=34% Similarity=0.596 Sum_probs=60.7
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCC-ChHHHHHHHHHHHHcCChhHHHHHHhhcccccCCC
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG-NGRDFTEIHNTYETLLDPKAKAVYDMSLVSRRRTR 102 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~-~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~~ 102 (131)
...|||+||||+++++.++||+ ++++|||+++ +.++|++|++||++|+||.+|..||..+.......
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 4679999999999999999999 9999999986 56799999999999999999999999988765543
No 2
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.76 E-value=8.9e-19 Score=112.18 Aligned_cols=62 Identities=34% Similarity=0.567 Sum_probs=56.7
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-hHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-GRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
....|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 35679999999999999999999 99999999885 5899999999999999999999999875
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.5e-18 Score=112.51 Aligned_cols=64 Identities=34% Similarity=0.578 Sum_probs=58.3
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
....|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..+..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 34679999999999999999999 99999999874 479999999999999999999999988653
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=3.1e-18 Score=113.45 Aligned_cols=64 Identities=38% Similarity=0.524 Sum_probs=58.8
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
...|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..+..+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 4679999999999999999999 99999999985 4699999999999999999999999887644
No 5
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=3.3e-18 Score=110.46 Aligned_cols=63 Identities=30% Similarity=0.476 Sum_probs=57.6
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
..|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..+.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 368999999999999999999 99999999863 5799999999999999999999999987654
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=3.2e-18 Score=111.66 Aligned_cols=63 Identities=33% Similarity=0.488 Sum_probs=57.6
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-----HHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-----RDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-----~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
...|||+||||+++++.++||+ ++++|||+++.. +.|++|++||++|+||.+|..||..+..+
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4679999999999999999999 999999998753 59999999999999999999999988654
No 7
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.3e-18 Score=113.45 Aligned_cols=64 Identities=31% Similarity=0.509 Sum_probs=58.2
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhccccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRR 99 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 99 (131)
...|||+||||+++++.++||+ ++++|||+++. .++|++|++||++|+||.+|..||..+...-
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 4679999999999999999999 99999999875 3699999999999999999999999886543
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2e-18 Score=111.75 Aligned_cols=64 Identities=30% Similarity=0.501 Sum_probs=58.2
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
....|||+||||+++++.++||+ ++++|||++.. .+.|++|++||++|+||.+|..||..+..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34679999999999999999999 99999999864 479999999999999999999999988653
No 9
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=3.7e-18 Score=115.74 Aligned_cols=63 Identities=32% Similarity=0.513 Sum_probs=56.3
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
.|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..+..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 58999999999999999999 99999999875 36999999999999999999999999876543
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=6.7e-18 Score=114.15 Aligned_cols=62 Identities=35% Similarity=0.578 Sum_probs=56.9
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
...|||+||||+++++.++||+ ++++|||+++. .++|++|++||+||+||.+|..||..+..
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 3679999999999999999999 99999999874 57999999999999999999999997654
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=7.4e-18 Score=111.61 Aligned_cols=62 Identities=29% Similarity=0.431 Sum_probs=57.2
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
...|||+||||+++++.++||+ ++++|||+++. .+.|++|++||++|+||.+|..||..+..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3679999999999999999999 99999999873 47999999999999999999999998865
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=7.6e-18 Score=116.27 Aligned_cols=66 Identities=21% Similarity=0.312 Sum_probs=60.1
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
....|||+||||+++++.++||+ ++++|||+++. .++|++|++||+||+||.+|..||..+..+..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 34689999999999999999999 99999999884 57999999999999999999999999877553
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.71 E-value=4.7e-18 Score=113.40 Aligned_cols=62 Identities=27% Similarity=0.538 Sum_probs=56.9
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
...|||+||||+++++.++||+ ++++|||+++. .+.|++|++||+||+||.+|..||..+..
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 4679999999999999999999 99999999762 36999999999999999999999998865
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=2e-17 Score=113.66 Aligned_cols=63 Identities=35% Similarity=0.502 Sum_probs=58.0
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
...|||+||||+++++.++||+ ++++|||+++. .++|++|++||+||+||.+|..||..+..+
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 3579999999999999999999 99999999985 479999999999999999999999988764
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.68 E-value=1.5e-17 Score=113.06 Aligned_cols=64 Identities=34% Similarity=0.513 Sum_probs=58.2
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
..|||+||||+++++.++||+ ++++|||+++. .++|++|++||++|+||.+|..||..+.....
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 469999999999999999999 99999999874 46999999999999999999999999877544
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.67 E-value=2.8e-17 Score=112.64 Aligned_cols=64 Identities=33% Similarity=0.422 Sum_probs=58.3
Q ss_pred CCccCcccccccCCCC-CHHHHHH-----HHHhCCCCCCC-------hHHHHHHHHHHHHcCChhHHHHHHhhcccc
Q 038518 35 GTRGSLYEVLRVEPKA-TISEIKT-----AKVYHPDLSGN-------GRDFTEIHNTYETLLDPKAKAVYDMSLVSR 98 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a-~~~eIk~-----a~~~HPDk~~~-------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 98 (131)
....|||+||||++++ +.++||+ ++++|||++++ .+.|++|++||++|+||.+|..||..+...
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 3477999999999999 9999999 99999999875 469999999999999999999999988653
No 17
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.65 E-value=9.3e-17 Score=116.17 Aligned_cols=63 Identities=29% Similarity=0.551 Sum_probs=57.3
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh----------HHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG----------RDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~----------~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
....|||+||||+++++.++||+ ++++|||+++.. +.|++|++||+||+||.+|+.||..+..
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 34679999999999999999999 999999998743 6999999999999999999999987765
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.61 E-value=6e-16 Score=114.95 Aligned_cols=63 Identities=32% Similarity=0.429 Sum_probs=57.5
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
.|||+||||+++++.++||+ ++++|||+++. .++|++|++||++|+||.+|+.||..+..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 58999999999999999999 99999999863 46999999999999999999999999876543
No 19
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.60 E-value=3.1e-17 Score=113.99 Aligned_cols=60 Identities=20% Similarity=0.221 Sum_probs=56.2
Q ss_pred ccCcccccccCCCCCH--HHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 37 RGSLYEVLRVEPKATI--SEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~--~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
..++|+||||+++++. ++||+ ++++|||+++..++|++|++||+||+||.+|+.||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4589999999999999 99999 999999999999999999999999999999999997654
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.56 E-value=1.3e-15 Score=112.52 Aligned_cols=61 Identities=26% Similarity=0.386 Sum_probs=54.7
Q ss_pred ccCcccccccCCCCC--HHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKAT--ISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~--~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++++ .++||+ ++++|||++++ .+.|..|++||+||+||.+|..||..+.+
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g 79 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQG 79 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHccC
Confidence 579999999999988 999999 99999999873 25899999999999999999999987753
No 21
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.56 E-value=1.5e-16 Score=117.86 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=53.9
Q ss_pred ccCcccccccCCCCC--HHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 37 RGSLYEVLRVEPKAT--ISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~--~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
..|+|+||||+++++ .++||+ ++++|||+++++++|++|++||++|+||.+|+.||.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 699999 999999999999999999999999999999999999886
No 22
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.2e-15 Score=101.46 Aligned_cols=55 Identities=24% Similarity=0.369 Sum_probs=49.8
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCC---ChHHHHHHHHHHHHcCChhHHH
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSG---NGRDFTEIHNTYETLLDPKAKA 89 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~---~~~~f~~i~~Ay~vL~dp~~R~ 89 (131)
....|||+||||+++++.++||+ ++++|||+++ +.++|++|++||++|+||.+|.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCccccc
Confidence 34689999999999999999999 9999999985 4579999999999999998764
No 23
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.54 E-value=2.5e-15 Score=110.79 Aligned_cols=59 Identities=22% Similarity=0.442 Sum_probs=54.2
Q ss_pred CcccccccCCCC--CHHHHHH-----HHHhCCCCCCCh---------HHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 39 SLYEVLRVEPKA--TISEIKT-----AKVYHPDLSGNG---------RDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 39 ~~Y~iLgv~~~a--~~~eIk~-----a~~~HPDk~~~~---------~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
|||+||||++++ +..+||+ ++++|||++++. +.|..|++||+||+||.+|..||..+.+
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g 76 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHG 76 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcC
Confidence 799999999999 9999999 999999998742 4899999999999999999999998753
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.53 E-value=1.3e-15 Score=99.29 Aligned_cols=54 Identities=17% Similarity=0.308 Sum_probs=51.0
Q ss_pred cCcccccccCCC--CCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHHHHH
Q 038518 38 GSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAKAVY 91 (131)
Q Consensus 38 ~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R~~Y 91 (131)
.++|+||||+++ ++.++||+ ++++|||++++.++|++|++||++|+|+.+|..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 578999999999 99999999 9999999999999999999999999999988873
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.53 E-value=5.3e-15 Score=112.07 Aligned_cols=61 Identities=18% Similarity=0.452 Sum_probs=54.2
Q ss_pred CccCcccccccCCC--CCHHHHHH-----HHHhCCCCCCC---------hHHHHHHHHHHHHcCChhHHHHHHhhcc
Q 038518 36 TRGSLYEVLRVEPK--ATISEIKT-----AKVYHPDLSGN---------GRDFTEIHNTYETLLDPKAKAVYDMSLV 96 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~--a~~~eIk~-----a~~~HPDk~~~---------~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 96 (131)
...|||+||||+++ ++..+||+ ++++|||++++ .++|++|++||+||+||.+|+.||..+.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 46799999999986 78999999 99999999873 2479999999999999999999997654
No 26
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.50 E-value=1.4e-15 Score=122.15 Aligned_cols=61 Identities=33% Similarity=0.584 Sum_probs=0.0
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC---hHHHHHHHHHHHHcCChhHHHHHHhhccc
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN---GRDFTEIHNTYETLLDPKAKAVYDMSLVS 97 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~---~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 97 (131)
..|||+||||+++|+.+|||+ ++++|||+++. .++|++|++||++|+||.+|+.||.++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 469999999999999999999 99999999874 57999999999999999999999998543
No 27
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.47 E-value=1.6e-14 Score=107.38 Aligned_cols=61 Identities=21% Similarity=0.448 Sum_probs=55.2
Q ss_pred CCccCccccc------ccCC-CCCHHHHHH-----HHHhCCCCCC-ChHHHHHHHHHHHHcCChhHHHHHHhhc
Q 038518 35 GTRGSLYEVL------RVEP-KATISEIKT-----AKVYHPDLSG-NGRDFTEIHNTYETLLDPKAKAVYDMSL 95 (131)
Q Consensus 35 ~~~~~~Y~iL------gv~~-~a~~~eIk~-----a~~~HPDk~~-~~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 95 (131)
....|||+|| |+++ +++..+||+ ++++|||+++ +.+.|++|++||+||+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3467999999 4665 899999999 9999999988 6789999999999999999999999977
No 28
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.9e-14 Score=91.75 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=47.2
Q ss_pred cCcccccccCC-CCCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCChhHH
Q 038518 38 GSLYEVLRVEP-KATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLDPKAK 88 (131)
Q Consensus 38 ~~~Y~iLgv~~-~a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~dp~~R 88 (131)
.++|+||||++ +++.++||+ ++++|||++++.+.|++|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence 58899999999 799999999 9999999998999999999999999987654
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.40 E-value=3.5e-14 Score=94.34 Aligned_cols=53 Identities=21% Similarity=0.165 Sum_probs=47.8
Q ss_pred CccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----hHHHHHHHHHHHHcCChhHH
Q 038518 36 TRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----GRDFTEIHNTYETLLDPKAK 88 (131)
Q Consensus 36 ~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----~~~f~~i~~Ay~vL~dp~~R 88 (131)
...++|+||||.++++.++||+ ++++|||+++. .++|++|++||++|+|...|
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 3568999999999999999999 99999999986 46999999999999987655
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.37 E-value=7e-14 Score=121.03 Aligned_cols=66 Identities=30% Similarity=0.401 Sum_probs=36.7
Q ss_pred CCccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC----hHHHHHHHHHHHHcCChhHHHHHHhhcccccC
Q 038518 35 GTRGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN----GRDFTEIHNTYETLLDPKAKAVYDMSLVSRRR 100 (131)
Q Consensus 35 ~~~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~----~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 100 (131)
....|||+||||+++++.++||+ ++++|||+++. .++|++|++||++|+||.+|+.||.++..+..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 34679999999999999999999 99999999863 46999999999999999999999999876543
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.36 E-value=5.9e-14 Score=104.51 Aligned_cols=54 Identities=19% Similarity=0.337 Sum_probs=49.6
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-------hHHHHHHHHHHHHcCChhHHHHH
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-------GRDFTEIHNTYETLLDPKAKAVY 91 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-------~~~f~~i~~Ay~vL~dp~~R~~Y 91 (131)
.|+|+||||+++++.++||+ ++++|||+++. .++|++|++||+||+||.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 59999999999999999999 99999999763 35999999999999999998766
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.30 E-value=4.8e-13 Score=91.61 Aligned_cols=49 Identities=10% Similarity=0.158 Sum_probs=44.2
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-----------hHHHHHHHHHHHHcCChh
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-----------GRDFTEIHNTYETLLDPK 86 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-----------~~~f~~i~~Ay~vL~dp~ 86 (131)
..|||+|||++. ++.++||+ ++++|||++++ +++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 99999999 99999999752 469999999999999975
No 33
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.22 E-value=1.3e-12 Score=87.49 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=42.6
Q ss_pred cCcccccccCCCCCHHHHHH-----HHHhCCCCCCC-------hHHHHHHHHHHHHcCC
Q 038518 38 GSLYEVLRVEPKATISEIKT-----AKVYHPDLSGN-------GRDFTEIHNTYETLLD 84 (131)
Q Consensus 38 ~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~-------~~~f~~i~~Ay~vL~d 84 (131)
.++|++|||++.++.++||+ ++++|||++++ +++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 47899999999999999999 99999999874 3589999999999964
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.77 E-value=3.4e-09 Score=83.10 Aligned_cols=57 Identities=32% Similarity=0.497 Sum_probs=47.1
Q ss_pred ccCcccccccCCCCCHHHHHH-----HHHhCCCCCCCh-------HHHHHHHHHHHHcCChhHHHHHHh
Q 038518 37 RGSLYEVLRVEPKATISEIKT-----AKVYHPDLSGNG-------RDFTEIHNTYETLLDPKAKAVYDM 93 (131)
Q Consensus 37 ~~~~Y~iLgv~~~a~~~eIk~-----a~~~HPDk~~~~-------~~f~~i~~Ay~vL~dp~~R~~YD~ 93 (131)
..++|++||+.+.++.++|++ ++++|||+.+.. +.|++|++||++|+||++|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999887 889999998753 499999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2.8e-07 Score=57.67 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=41.6
Q ss_pred cccccccCCC---CCHHHHHH-----HHHhCCCCCCChHHHHHHHHHHHHcCC
Q 038518 40 LYEVLRVEPK---ATISEIKT-----AKVYHPDLSGNGRDFTEIHNTYETLLD 84 (131)
Q Consensus 40 ~Y~iLgv~~~---a~~~eIk~-----a~~~HPDk~~~~~~f~~i~~Ay~vL~d 84 (131)
-|.||||+++ ++.++|++ ...+|||++++.-...+|++|.++|..
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999999 99999999 999999999999999999999998864
No 36
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=22.95 E-value=47 Score=20.43 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=15.0
Q ss_pred HHHHHHHcCChhHHHHHHh
Q 038518 75 IHNTYETLLDPKAKAVYDM 93 (131)
Q Consensus 75 i~~Ay~vL~dp~~R~~YD~ 93 (131)
|++|.+.|.-.++|+.||-
T Consensus 33 l~~aa~~L~v~~kRRiYDI 51 (76)
T 1cf7_A 33 LKLAADTLAVRQKRRIYDI 51 (76)
T ss_dssp HHHHHHHTTTCCTHHHHHH
T ss_pred HHHHHHHhCCccceehhhH
Confidence 6778888875479999994
Done!