Your job contains 1 sequence.
>038519
MEKRKRSNSDILNSNSKGHFVYEDLGRRGIIEHQVSKLDTLAGIAIKYGVDVADIRKLNG
LSTDLQMFALKTLQIPLPGKHPPSPCLSNGYETRGQANHERTPDHHVQHDLFDSFRSLRL
KSKPQWKVSPAMNSLQGYYGLKPTGQRPPSEGCEMAVFRKREAQCSEDCPLLKPSRLYKD
SQRKTRSLANFLQADNSKEPDNIISSDFRERESESGEWKDKLVRRRQKSEDDSSTSVPEM
LLKEDNSNTGGVPSITGKGLALRPAAASRTAVGADTQGCDDRISGVRKSSSTPSFEDQDA
SSPSPIWHGLPKPISRWKNKAALD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038519
(324 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181539 - symbol:AT5G08200 "AT5G08200" species... 609 3.7e-64 2
TAIR|locus:2178272 - symbol:AT5G23130 "AT5G23130" species... 581 2.0e-56 1
ZFIN|ZDB-GENE-040426-1895 - symbol:lysmd4 "LysM, putative... 126 1.4e-05 1
UNIPROTKB|E2RD13 - symbol:LYSMD1 "Uncharacterized protein... 122 2.5e-05 1
UNIPROTKB|F1SSY1 - symbol:LYSMD1 "Uncharacterized protein... 121 3.3e-05 1
UNIPROTKB|F1RYP8 - symbol:LYSMD2 "Uncharacterized protein... 120 4.0e-05 1
RGD|1561865 - symbol:Lysmd1 "LysM, putative peptidoglycan... 119 5.7e-05 1
UNIPROTKB|Q1JQA8 - symbol:LYSMD2 "LysM and putative pepti... 118 6.2e-05 1
UNIPROTKB|E1BT57 - symbol:LYSMD2 "Uncharacterized protein... 116 6.9e-05 1
MGI|MGI:1917332 - symbol:Lysmd2 "LysM, putative peptidogl... 117 8.2e-05 1
UNIPROTKB|A0JNI1 - symbol:LYSMD1 "LysM and putative pepti... 117 9.6e-05 1
UNIPROTKB|Q8IV50 - symbol:LYSMD2 "LysM and putative pepti... 116 0.00011 1
UNIPROTKB|F1MNB9 - symbol:LYSMD1 "LysM and putative pepti... 116 0.00013 1
UNIPROTKB|Q96S90 - symbol:LYSMD1 "LysM and putative pepti... 115 0.00017 1
RGD|1304585 - symbol:Lysmd2 "LysM, putative peptidoglycan... 114 0.00019 1
>TAIR|locus:2181539 [details] [associations]
symbol:AT5G08200 "AT5G08200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0016998 "cell wall macromolecule
catabolic process" evidence=ISS] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AY140035 EMBL:BT008509
IPI:IPI00536867 RefSeq:NP_196437.2 UniGene:At.32612
UniGene:At.69044 ProteinModelPortal:Q8L708 PaxDb:Q8L708
PRIDE:Q8L708 EnsemblPlants:AT5G08200.1 GeneID:830716
KEGG:ath:AT5G08200 TAIR:At5g08200 eggNOG:NOG318163
HOGENOM:HOG000242090 InParanoid:Q8L708 OMA:MSSCGQY PhylomeDB:Q8L708
ProtClustDB:CLSN2690192 ArrayExpress:Q8L708 Genevestigator:Q8L708
Uniprot:Q8L708
Length = 409
Score = 609 (219.4 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 151/323 (46%), Positives = 197/323 (60%)
Query: 28 RGIIEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCL 87
RG IEH++SK DTLAG+AIKYGV+VAD++K+N L TDLQMFALK+LQIPLPG+HPPSPCL
Sbjct: 75 RGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPLPGRHPPSPCL 134
Query: 88 SNGYETRGQ--ANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSPAMNSLQGYYGLKPTG 145
SNG G+ + HE +H + ++FDSF+SLRLKS + KVSPAM SLQGYYGLKP
Sbjct: 135 SNGSLNHGEGCSCHEPESPNHSEQEVFDSFQSLRLKSSEK-KVSPAMYSLQGYYGLKPAD 193
Query: 146 QRPPSEGC-EMAVFRKREAQC---SEDCPLLKP---SRLYKDSQRKTRSLANFLQADNSK 198
+ GC EM ++ + + D L+P + + RK+RSL N L + ++
Sbjct: 194 RTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLVNALIEEVNQ 253
Query: 199 EPDNIISSDFRERESESGEWKDKLVRRRQKSEDDSSTSVPEMLLKEDN-SNTGGVPSITG 257
PDN +E S DK +RRRQKSE D S+ PE++LKE+N S+ GG SI G
Sbjct: 254 SPDN------NTQEPTS----DKFMRRRQKSEADFSSRTPELVLKEENGSSNGGFLSIAG 303
Query: 258 KGLALRPAAASRTAVGADTQG--------------CDDRISGVRKSSSTPSFEDQDASSP 303
KGLALR A+SRT + A+++ D S VRKSSS S +D D +S
Sbjct: 304 KGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSSVRKSSSASSLQDPDGNSN 363
Query: 304 S---PIWHGLPKPISRWKNKAAL 323
+ +W P S+W K L
Sbjct: 364 NGSLSLW-----PTSKWSLKPDL 381
Score = 63 (27.2 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 300 ASSPSPIWHGLPKPISRWKNKAALD 324
A+ S I+ GLPKP++ +NK ALD
Sbjct: 385 AAITSSIFDGLPKPLTGRRNKTALD 409
>TAIR|locus:2178272 [details] [associations]
symbol:AT5G23130 "AT5G23130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0016998 "cell wall macromolecule
catabolic process" evidence=IEA;ISS] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 EMBL:CP002688
UniGene:At.28379 GO:GO:0016998 ProtClustDB:CLSN2690192
EMBL:AY070377 EMBL:AY113945 IPI:IPI00522200 RefSeq:NP_197704.2
ProteinModelPortal:Q8VYP8 SMR:Q8VYP8 IntAct:Q8VYP8 PaxDb:Q8VYP8
PRIDE:Q8VYP8 ProMEX:Q8VYP8 EnsemblPlants:AT5G23130.1 GeneID:832377
KEGG:ath:AT5G23130 TAIR:At5g23130 eggNOG:KOG2850 InParanoid:Q8VYP8
OMA:MASSIFD PhylomeDB:Q8VYP8 ArrayExpress:Q8VYP8
Genevestigator:Q8VYP8 Uniprot:Q8VYP8
Length = 397
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 149/317 (47%), Positives = 194/317 (61%)
Query: 29 GIIEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLS 88
G IEH+VSK DTLAGIAIKYGV+VADI KLNGL TDLQMFAL++L+IPLPG+HPPSPCLS
Sbjct: 68 GYIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPLPGRHPPSPCLS 127
Query: 89 NGYETRG-----QANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSPAMNSLQGYYGLKP 143
NG G QA+ + +H D+FDSF+SLRL + K+SPAMNSLQGYYGLKP
Sbjct: 128 NGSLNHGEDWSEQASSSASNGNH--QDVFDSFQSLRLNHSEK-KISPAMNSLQGYYGLKP 184
Query: 144 TGQRPPSEGCEMAVFRKREAQCSEDCPLLKP---SRLYKDSQRKTRSLANFLQADNSKEP 200
+R SEG MAV++ +Q ++ L P + RK+RSL + + A+ ++ P
Sbjct: 185 KNRRA-SEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSLVDAVIAEVNQSP 243
Query: 201 DNIISSDFRERESESGEWKDKLVRRRQKSEDDSSTSVPEMLLKEDN-SNTGGVPSITGKG 259
+ S E S DK +RRRQKSE D S+ PE+LLKE+N S++G +I GK
Sbjct: 244 N---PSKAGGGEVNS---TDKPMRRRQKSEADFSSRAPELLLKEENRSSSGAFSAIAGKN 297
Query: 260 LALRPAAASRTAVGADTQGCD------------DRISGVRKSSSTPSFEDQDASSP-SPI 306
LALR A+SR + A+T+ + D S VRKS S S ++ + +S S +
Sbjct: 298 LALRSKASSRANLSAETRHLNSIPINLMDAPVGDSFSSVRKSVSASSLQEPNCNSNGSSL 357
Query: 307 WHGLPKPISRWKNKAAL 323
W P S+W K L
Sbjct: 358 W-----PTSKWTLKPEL 369
>ZFIN|ZDB-GENE-040426-1895 [details] [associations]
symbol:lysmd4 "LysM, putative
peptidoglycan-binding, domain containing 4" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-040426-1895 GO:GO:0016021
HOGENOM:HOG000237338 GeneTree:ENSGT00530000063803 EMBL:BX649426
EMBL:CR925803 EMBL:CU570785 EMBL:BC062528 IPI:IPI00493611
RefSeq:NP_957144.2 UniGene:Dr.154406 UniGene:Dr.77739
Ensembl:ENSDART00000099463 GeneID:100149102 KEGG:dre:100149102
CTD:145748 eggNOG:NOG329041 HOVERGEN:HBG108111 InParanoid:Q6P606
OMA:IKRVNNF OrthoDB:EOG4RNB94 NextBio:20792727 Bgee:Q6P606
Uniprot:Q6P606
Length = 267
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 1 MEKRKRSNSDILNSNSKGHFVYEDLGRRGIIEHQVSKLDTLAGIAIKYGVDVADIRKLNG 60
ME R RS +S+SK E +G ++E +S D L+ +A++YG VADI+++N
Sbjct: 47 MELRPRSR----DSSSKEK---EGVGEMLLLERDISHEDNLSKLALQYGCKVADIKRVNN 99
Query: 61 LSTDLQMFALKTLQIPLPGKHPPSPCLSNGYETRGQANHERTPDHHVQHDLFDSFRSLR- 119
L + M+ALK+++IP+ KH G T + RTP HD S ++
Sbjct: 100 LFQEQDMYALKSIKIPVR-KH--------GLLTEA-ISELRTPQQRPSHDAAPSNSAMAS 149
Query: 120 LKSKPQ 125
+ +PQ
Sbjct: 150 VSGRPQ 155
>UNIPROTKB|E2RD13 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:AAEX03011056 RefSeq:XP_851253.1
ProteinModelPortal:E2RD13 Ensembl:ENSCAFT00000019829 GeneID:608985
KEGG:cfa:608985 NextBio:20894605 Uniprot:E2RD13
Length = 227
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/120 (32%), Positives = 61/120 (50%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EHQ++ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPILTE-PRD--LFNG 96
Query: 91 YETRGQANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSPAMNSLQGYYGLKPTGQRPPS 150
++ + N E + ++D +R S + K P G L G+ PP+
Sbjct: 97 LDSEEEKNGEE--EVQSRND------EVRPHSADRKKQEPGSEHANGEV-LPTPGREPPT 147
>UNIPROTKB|F1SSY1 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:CU138569 RefSeq:NP_001230430.1
UniGene:Ssc.3652 Ensembl:ENSSSCT00000029303 GeneID:100154705
KEGG:ssc:100154705 Uniprot:F1SSY1
Length = 227
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/121 (34%), Positives = 63/121 (52%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EHQ++ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPILTE-PRD--LFNG 96
Query: 91 YETRGQANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSPAMNSLQGYYGLKPT-GQRPP 149
E+ E+ + VQ D S + K Q + P + + + PT GQ PP
Sbjct: 97 LESE----EEKDGEEEVQPSK-DEVWSHSAERKKQ-ETGPGRANGE----VLPTPGQEPP 146
Query: 150 S 150
+
Sbjct: 147 T 147
>UNIPROTKB|F1RYP8 [details] [associations]
symbol:LYSMD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 GeneTree:ENSGT00520000055632 CTD:256586
OMA:QDIEGPS EMBL:CU019579 RefSeq:XP_001925770.1 UniGene:Ssc.62894
Ensembl:ENSSSCT00000005112 GeneID:100155966 KEGG:ssc:100155966
Uniprot:F1RYP8
Length = 221
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EH+V DTL GIA+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 77 VEHRVRAGDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIPVISE---KPLLFNG 133
Query: 91 YETRGQANHERTPDHHVQHD 110
+ +E T D H+
Sbjct: 134 LNSIDSPENE-TVDSGFPHE 152
>RGD|1561865 [details] [associations]
symbol:Lysmd1 "LysM, putative peptidoglycan-binding, domain
containing 1" species:10116 "Rattus norvegicus" [GO:0016998 "cell
wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
RGD:1561865 GO:GO:0016998 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 OrthoDB:EOG43N7DW
OMA:RMQQRAV EMBL:BC089113 EMBL:BC092612 IPI:IPI00208008
RefSeq:NP_001019473.1 UniGene:Rn.160047 ProteinModelPortal:Q5HZA4
SMR:Q5HZA4 PhosphoSite:Q5HZA4 Ensembl:ENSRNOT00000028640
GeneID:499671 KEGG:rno:499671 UCSC:RGD:1561865
GeneTree:ENSGT00520000055632 InParanoid:Q5HZA4 NextBio:703646
Genevestigator:Q5HZA4 GermOnline:ENSRNOG00000021099 Uniprot:Q5HZA4
Length = 227
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 46/138 (33%), Positives = 68/138 (49%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EHQ+ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 40 LEHQLEPGDTLAGLALKYGVTMEQIKRTNRLYTNDSIFLKKTLYIPILTE-PRD--LFNG 96
Query: 91 YETRGQANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSPAMNSLQGYYGLKP-TGQRPP 149
++ + N + V+ D S K K Q S + +G GL P G P
Sbjct: 97 LDSEEEENDG---EEEVRPSK-DEIGSSSGKRKNQGSAS---SQPKGT-GLPPHQGTSTP 148
Query: 150 SEGCEMAVFRKR-EAQCS 166
S + F K+ ++Q S
Sbjct: 149 SHDLSASDFLKKLDSQIS 166
>UNIPROTKB|Q1JQA8 [details] [associations]
symbol:LYSMD2 "LysM and putative peptidoglycan-binding
domain-containing protein 2" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 HOGENOM:HOG000290644 HOVERGEN:HBG079723
GeneTree:ENSGT00520000055632 EMBL:BC116100 IPI:IPI00707636
RefSeq:NP_001068953.1 UniGene:Bt.18507 ProteinModelPortal:Q1JQA8
SMR:Q1JQA8 PRIDE:Q1JQA8 Ensembl:ENSBTAT00000023518 GeneID:511013
KEGG:bta:511013 CTD:256586 eggNOG:NOG25663 InParanoid:Q1JQA8
OMA:QDIEGPS OrthoDB:EOG4F4SC5 NextBio:20869727 Uniprot:Q1JQA8
Length = 215
Score = 118 (46.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EH+V DTL GIA+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 72 VEHRVRAGDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIPVISE---KPLLFNG 128
Query: 91 YETRGQANHERTPDHHVQHDLFDSFRSLRLKSKPQWKVSP 130
+ +E + +L + + S + V P
Sbjct: 129 LNSVDSPENETVDSFSHEEELVAAGEDVSPLSPQELDVQP 168
>UNIPROTKB|E1BT57 [details] [associations]
symbol:LYSMD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0016998
GeneTree:ENSGT00520000055632 CTD:256586 OMA:QDIEGPS
EMBL:AADN02045354 EMBL:AADN02045355 EMBL:AADN02045356
EMBL:AADN02045357 IPI:IPI00576281 RefSeq:XP_413806.1
UniGene:Gga.15785 Ensembl:ENSGALT00000007573 GeneID:415423
KEGG:gga:415423 NextBio:20819035 ArrayExpress:E1BT57 Uniprot:E1BT57
Length = 195
Score = 116 (45.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EH++S DTL GIA+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 46 VEHRLSAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLRKTLNIPVISE---KPLLFNG 102
Query: 91 YETRGQANHE 100
+ +E
Sbjct: 103 LNSLESPENE 112
>MGI|MGI:1917332 [details] [associations]
symbol:Lysmd2 "LysM, putative peptidoglycan-binding, domain
containing 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 MGI:MGI:1917332 GO:GO:0016998 HOGENOM:HOG000290644
HOVERGEN:HBG079723 eggNOG:NOG25663 OrthoDB:EOG4F4SC5 EMBL:AK008800
EMBL:BC048545 IPI:IPI00110862 IPI:IPI00785357 UniGene:Mm.19119
ProteinModelPortal:Q9D7V2 SMR:Q9D7V2 PhosphoSite:Q9D7V2
PaxDb:Q9D7V2 PRIDE:Q9D7V2 UCSC:uc009qsq.1 UCSC:uc009qsr.1
InParanoid:Q9D7V2 Genevestigator:Q9D7V2
GermOnline:ENSMUSG00000032184 Uniprot:Q9D7V2
Length = 215
Score = 117 (46.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 33/89 (37%), Positives = 45/89 (50%)
Query: 25 LGRRGI---IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKH 81
LG R I +EH+V DTL GIA+KYGV + I++ N L T+ +F KTL IP+ +
Sbjct: 62 LGARVIERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPILSE- 120
Query: 82 PPSPCLSNGYETRGQANHERTPDHHVQHD 110
P L NG + E Q +
Sbjct: 121 --KPLLFNGLNSIDSPESETVDSSFCQEE 147
>UNIPROTKB|A0JNI1 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 EMBL:BC126694 IPI:IPI00824412 RefSeq:NP_001071366.1
UniGene:Bt.58596 ProteinModelPortal:A0JNI1 SMR:A0JNI1 PRIDE:A0JNI1
GeneID:510653 KEGG:bta:510653 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 InParanoid:A0JNI1
OrthoDB:EOG43N7DW NextBio:20869551 Uniprot:A0JNI1
Length = 225
Score = 117 (46.2 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPL 77
+EHQ++ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86
>UNIPROTKB|Q8IV50 [details] [associations]
symbol:LYSMD2 "LysM and putative peptidoglycan-binding
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 HOGENOM:HOG000290644 HOVERGEN:HBG079723
CTD:256586 eggNOG:NOG25663 OMA:QDIEGPS OrthoDB:EOG4F4SC5
EMBL:AY125955 EMBL:BC022075 EMBL:BC033515 EMBL:CR936638
IPI:IPI00216874 IPI:IPI00784740 RefSeq:NP_001137389.1
RefSeq:NP_699205.1 UniGene:Hs.603629 ProteinModelPortal:Q8IV50
SMR:Q8IV50 PhosphoSite:Q8IV50 DMDM:74728034 PRIDE:Q8IV50
DNASU:256586 Ensembl:ENST00000267838 Ensembl:ENST00000454181
Ensembl:ENST00000560491 GeneID:256586 KEGG:hsa:256586
UCSC:uc002abi.3 GeneCards:GC15M052015 HGNC:HGNC:28571 HPA:HPA040460
neXtProt:NX_Q8IV50 PharmGKB:PA142671494 InParanoid:Q8IV50
PhylomeDB:Q8IV50 GenomeRNAi:256586 NextBio:92836 Bgee:Q8IV50
CleanEx:HS_LYSMD2 Genevestigator:Q8IV50 GermOnline:ENSG00000140280
Uniprot:Q8IV50
Length = 215
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EH+V DTL GIA+KYGV + I++ N L T+ +F KTL IP+ + P L NG
Sbjct: 71 VEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPVISE---KPLLFNG 127
Query: 91 YETRGQANHERTPDH 105
+ +E T D+
Sbjct: 128 LNSIDSPENE-TADN 141
>UNIPROTKB|F1MNB9 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 IPI:IPI00824412 UniGene:Bt.58596 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:DAAA02007252
Ensembl:ENSBTAT00000027183 Uniprot:F1MNB9
Length = 225
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPL 77
+EHQ++ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>UNIPROTKB|Q96S90 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 EMBL:AL592424 CTD:388695
eggNOG:NOG44631 HOGENOM:HOG000290644 HOVERGEN:HBG079723
OrthoDB:EOG43N7DW EMBL:AY037156 EMBL:AK298706 EMBL:AL122088
EMBL:BX647911 EMBL:BC031649 IPI:IPI00045531 IPI:IPI00909116
RefSeq:NP_001130015.1 RefSeq:NP_997716.1 UniGene:Hs.591482 PDB:2DJP
PDBsum:2DJP ProteinModelPortal:Q96S90 SMR:Q96S90 PhosphoSite:Q96S90
DMDM:74752122 PRIDE:Q96S90 DNASU:388695 Ensembl:ENST00000368908
Ensembl:ENST00000440902 GeneID:388695 KEGG:hsa:388695
UCSC:uc001ewy.3 UCSC:uc010pcr.2 GeneCards:GC01M151132
HGNC:HGNC:32070 HPA:HPA028055 neXtProt:NX_Q96S90
PharmGKB:PA142671493 InParanoid:Q96S90 OMA:RMQQRAV PhylomeDB:Q96S90
EvolutionaryTrace:Q96S90 GenomeRNAi:388695 NextBio:102288
Bgee:Q96S90 CleanEx:HS_LYSMD1 Genevestigator:Q96S90
GermOnline:ENSG00000163155 Uniprot:Q96S90
Length = 227
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPL 77
+EHQ+ DTLAG+A+KYGV + I++ N L T+ +F KTL IP+
Sbjct: 40 LEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>RGD|1304585 [details] [associations]
symbol:Lysmd2 "LysM, putative peptidoglycan-binding, domain
containing 2" species:10116 "Rattus norvegicus" [GO:0016998 "cell
wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
RGD:1304585 EMBL:CH473954 GO:GO:0016998
GeneTree:ENSGT00520000055632 OMA:QDIEGPS UniGene:Rn.7432
Ensembl:ENSRNOT00000014301 Uniprot:G3V7F2
Length = 215
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 31 IEHQVSKLDTLAGIAIKYGVDVADIRKLNGLSTDLQMFALKTLQIPLPGKHPPSPCLSNG 90
+EH+V DTL GIA+KYGV + I++ N L T+ +F KTL IP+ + P + NG
Sbjct: 71 VEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPILSE---KPLVFNG 127
Query: 91 YETRGQANHERTPDHHVQHD 110
+ E T D H+
Sbjct: 128 LNSIDSPESE-TVDSSFCHE 146
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 324 324 0.00086 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 609 (65 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.51u 0.10s 34.61t Elapsed: 00:00:02
Total cpu time: 34.51u 0.10s 34.61t Elapsed: 00:00:02
Start: Sat May 11 10:38:05 2013 End: Sat May 11 10:38:07 2013