Query 038520
Match_columns 322
No_of_seqs 182 out of 1502
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 11:54:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038520.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038520hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 4E-104 9E-109 753.7 23.5 292 26-322 23-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.2E-98 3E-103 713.8 23.7 293 27-321 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 9.8E-71 2.1E-75 506.3 12.2 227 44-286 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 5.2E-68 1.1E-72 499.4 22.4 230 42-319 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.4E-67 2.9E-72 491.0 21.1 230 39-307 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 5.2E-64 1.1E-68 465.5 21.1 229 31-307 4-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 3.3E-62 7.1E-67 453.0 20.7 218 42-307 18-248 (251)
8 cd00692 ligninase Ligninase an 100.0 5.5E-62 1.2E-66 466.0 22.3 234 40-322 16-287 (328)
9 cd00314 plant_peroxidase_like 100.0 7.6E-59 1.6E-63 432.8 19.3 222 43-303 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 3.9E-56 8.5E-61 432.3 18.5 256 42-312 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 2.7E-53 5.8E-58 435.7 19.2 251 42-308 55-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.3E-49 2.7E-54 406.7 18.8 252 42-309 57-411 (726)
13 cd08201 plant_peroxidase_like_ 100.0 8E-49 1.7E-53 363.6 11.3 213 48-303 31-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.3E-38 2.7E-43 298.9 18.2 219 46-305 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 2.4E-33 5.2E-38 288.7 17.4 219 43-306 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.8E-33 1.5E-37 284.0 18.7 219 46-306 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 5.5E-31 1.2E-35 259.3 16.1 250 43-305 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.3 4.4E-11 9.5E-16 119.4 12.5 215 46-305 452-725 (730)
19 PTZ00411 transaldolase-like pr 74.2 16 0.00035 35.9 8.3 60 136-195 180-252 (333)
20 TIGR00874 talAB transaldolase. 54.9 99 0.0021 30.2 9.5 129 134-292 166-311 (317)
21 PRK12346 transaldolase A; Prov 54.5 70 0.0015 31.2 8.4 77 118-195 149-241 (316)
22 PRK12309 transaldolase/EF-hand 52.5 1.2E+02 0.0026 30.5 10.0 58 136-194 174-245 (391)
23 cd00957 Transaldolase_TalAB Tr 47.5 65 0.0014 31.4 7.0 47 136-183 168-218 (313)
24 PF11895 DUF3415: Domain of un 46.9 17 0.00036 28.4 2.3 18 289-306 2-19 (80)
25 PRK05269 transaldolase B; Prov 46.4 1.1E+02 0.0024 29.8 8.5 50 135-184 169-221 (318)
26 KOG0400 40S ribosomal protein 25.4 39 0.00084 29.0 1.3 33 167-199 31-64 (151)
27 PF04225 OapA: Opacity-associa 23.0 66 0.0014 25.1 2.1 26 169-194 10-35 (85)
28 COG3763 Uncharacterized protei 21.0 1E+02 0.0022 23.6 2.6 28 43-70 24-51 (71)
29 PF00043 GST_C: Glutathione S- 20.7 1.5E+02 0.0032 22.1 3.7 23 115-137 51-73 (95)
30 cd00439 Transaldolase Transald 20.4 74 0.0016 29.9 2.3 76 99-183 127-209 (252)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=4e-104 Score=753.72 Aligned_cols=292 Identities=41% Similarity=0.706 Sum_probs=277.9
Q ss_pred ccccccchhccChhHHHHHHHHHHHHHHhCchhHHHHHHHHhccCC--CCCCcccccCCCCCCCccCCCCCCCcchhHHH
Q 038520 26 FELQFNIYNDSCPEAEAIIFSWVENAVMEDSRMAASLLRLHFHDCF--GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEV 103 (322)
Q Consensus 26 ~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcf--GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~ 103 (322)
++|+++||++|||++|+||++.|++++.+|++++|++|||+||||| ||||||||+++ ..||++++|. +++||++
T Consensus 23 ~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf~~ 98 (324)
T PLN03030 23 QGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGYDV 98 (324)
T ss_pred ccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchHHH
Confidence 5699999999999999999999999999999999999999999999 99999999864 3699999997 8899999
Q ss_pred HHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCh
Q 038520 104 IDAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTL 183 (322)
Q Consensus 104 I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 183 (322)
|+.||++||++||++|||||||+|||||||+++|||.|+|++||||+++|.++++. +||+|+.++++|++.|+++||+.
T Consensus 99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~ 177 (324)
T PLN03030 99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT 177 (324)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999877775 89999999999999999999999
Q ss_pred hhhhhhhccccccccccccccccccCCCC---CCCCCCCHHHHHHHhhhCCCCCC-CccccCCCCCCCccChHHHHHHhc
Q 038520 184 QDMVALSGAHTMGKARCLTFSSRLQSSSN---TNGPDNNPDFLQSLQQLCSGSDI-DALAQLDLVTPATFDNQYYINLLS 259 (322)
Q Consensus 184 ~dlVaLsGaHTiG~ahc~~f~~Rl~~~~~---~~dp~~d~~~~~~L~~~Cp~~~~-~~~~~lD~~Tp~~FDN~Yy~~l~~ 259 (322)
+|||+||||||||++||.+|.+|||||++ .+||+||+.|+.+|++.||..++ .+.+++|+.||.+|||+||+||+.
T Consensus 178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~ 257 (324)
T PLN03030 178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKN 257 (324)
T ss_pred HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHh
Confidence 99999999999999999999999999873 37999999999999999996333 346789999999999999999999
Q ss_pred CCCCchhhhhcccChhhHHHHHhhccCh----hhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 038520 260 GEGLLPSDQILVSQDQTREIINSYAEDT----SVFFEDFKISMLKMGSLGPASGNDGQIRRNCRVVN 322 (322)
Q Consensus 260 ~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 322 (322)
++|+|+|||+|++|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+||||++|+++|
T Consensus 258 ~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 258 GRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred cCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.2e-98 Score=713.82 Aligned_cols=293 Identities=54% Similarity=0.924 Sum_probs=281.7
Q ss_pred cccccchhccChhHHHHHHHHHHHHHHhCchhHHHHHHHHhccCC--CCCCcccccCCCCCCCccCCCCCCCcchhHHHH
Q 038520 27 ELQFNIYNDSCPEAEAIIFSWVENAVMEDSRMAASLLRLHFHDCF--GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVI 104 (322)
Q Consensus 27 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcf--GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I 104 (322)
||+++||+++||++|+||+++|++.+.+|++++|+||||+||||| ||||||||+++.++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 599999999999999999999999999999999999999999999 999999999887788999999998 78999999
Q ss_pred HHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChh
Q 038520 105 DAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQ 184 (322)
Q Consensus 105 ~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 184 (322)
+.||++||++||++|||||||+||||+||+++|||.|+|++||+|++++.+.++ .+||+|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877665 7899999999999999999999999
Q ss_pred hhhhhhccccccccccccccccccCCC--CCCCCCCCHHHHHHHhhhCCCCCC-CccccCCCCCCCccChHHHHHHhcCC
Q 038520 185 DMVALSGAHTMGKARCLTFSSRLQSSS--NTNGPDNNPDFLQSLQQLCSGSDI-DALAQLDLVTPATFDNQYYINLLSGE 261 (322)
Q Consensus 185 dlVaLsGaHTiG~ahc~~f~~Rl~~~~--~~~dp~~d~~~~~~L~~~Cp~~~~-~~~~~lD~~Tp~~FDN~Yy~~l~~~~ 261 (322)
|||+|+||||||++||.+|.+|||||+ +.+||+||+.|+..|++.||+.++ .+.+++|+.||.+|||+||++|+.++
T Consensus 159 d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 159 DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 999999999999999999999999987 468999999999999999997543 56789999999999999999999999
Q ss_pred CCchhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCCCCCCCcccccCccC
Q 038520 262 GLLPSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPASGNDGQIRRNCRVV 321 (322)
Q Consensus 262 glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 321 (322)
|+|+|||+|+.|++|+++|++||.||+.|+++|+.||+||++|+|+||.+||||++|+++
T Consensus 239 glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=9.8e-71 Score=506.29 Aligned_cols=227 Identities=51% Similarity=0.846 Sum_probs=207.4
Q ss_pred HHHHHHHHHHhCchhHHHHHHHHhccCC---CCCCcccccCCCCCCCccCCCCCCCcchhHHHHHHHHHHhhhcCCCCCC
Q 038520 44 IFSWVENAVMEDSRMAASLLRLHFHDCF---GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVIDAIKSDLESVCPETVS 120 (322)
Q Consensus 44 V~~~v~~~~~~d~~~aa~llRL~FHDcf---GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le~~cp~~VS 120 (322)
||++|++.+.++++++|+||||+||||| |||||||+. .+|+++++|.++.+|+++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 7999999999999999999999999998 999999983 57999999985545999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhcccccccccc
Q 038520 121 CADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSGAHTMGKARC 200 (322)
Q Consensus 121 cADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~ahc 200 (322)
|||||+||||+||+.+|||.|+|++||+|++++...++ .+||.|..++++|++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998777 68999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcCCCCchhhhhcccChhhHHHH
Q 038520 201 LTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSGEGLLPSDQILVSQDQTREII 280 (322)
Q Consensus 201 ~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V 280 (322)
.+|. ||| + .+||+||+.|+.. .| ..++++.+++| ||.+|||+||++|+.++|+|+||++|++|++|+++|
T Consensus 155 ~~f~-rl~-~--~~dp~~d~~~~~~---~C-~~~~~~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V 224 (230)
T PF00141_consen 155 SSFS-RLY-F--PPDPTMDPGYAGQ---NC-NSGGDNGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIV 224 (230)
T ss_dssp GCTG-GTS-C--SSGTTSTHHHHHH---SS-STSGCTCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHH
T ss_pred cccc-ccc-c--cccccccccccee---cc-CCCcccccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHH
Confidence 9999 999 4 6799999999988 99 44444477888 999999999999999999999999999999999999
Q ss_pred HhhccC
Q 038520 281 NSYAED 286 (322)
Q Consensus 281 ~~yA~d 286 (322)
++||+|
T Consensus 225 ~~yA~d 230 (230)
T PF00141_consen 225 ERYAQD 230 (230)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=5.2e-68 Score=499.40 Aligned_cols=230 Identities=29% Similarity=0.462 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHhCchhHHHHHHHHhccCC---------CCCCcccccCCCCCCCccCCCCCCCcchhHHHHHHHHHHhh
Q 038520 42 AIIFSWVENAVMEDSRMAASLLRLHFHDCF---------GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVIDAIKSDLE 112 (322)
Q Consensus 42 ~iV~~~v~~~~~~d~~~aa~llRL~FHDcf---------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le 112 (322)
+.+++++ ..+.+||.++|.||||+||||| ||||||+++ +|+++++|.++.+||++|+.||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 3466666 4477899999999999999998 999999984 5999999984447999999999987
Q ss_pred hcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhcc
Q 038520 113 SVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSGA 192 (322)
Q Consensus 113 ~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 192 (322)
++|||||||+||||+||+.+|||.|+|++||+|++++.+ +.+||+|+.+++++++.|+++||+++|||+|+||
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 389999999999999999999999999999999999863 4689999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcC--CCC--chhhh
Q 038520 193 HTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSG--EGL--LPSDQ 268 (322)
Q Consensus 193 HTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl--L~SD~ 268 (322)
||||++||. |+ +|. + +++ .||.+|||+||++|+.+ +|+ |+|||
T Consensus 160 HTiG~ahc~----r~-g~~---g------------------------~~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~ 206 (289)
T PLN02608 160 HTLGRAHPE----RS-GFD---G------------------------PWT-KEPLKFDNSYFVELLKGESEGLLKLPTDK 206 (289)
T ss_pred ccccccccc----CC-CCC---C------------------------CCC-CCCCccChHHHHHHHcCCcCCccccccCH
Confidence 999999995 54 221 0 122 69999999999999999 798 79999
Q ss_pred hcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCCCCCCCcccccCc
Q 038520 269 ILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPASGNDGQIRRNCR 319 (322)
Q Consensus 269 ~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 319 (322)
+|+.|++|+.+|++||.|++.|+++|+.||+||++|+|+||.+||+.+.-+
T Consensus 207 ~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 207 ALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred hhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 999999999999999999999999999999999999999999999987543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.4e-67 Score=490.96 Aligned_cols=230 Identities=26% Similarity=0.373 Sum_probs=209.4
Q ss_pred hHHHHHHHHHHHHHHhCchhHHHHHHHHhccCCCCCCcccccC---CCCCCCccCCCCCCCcchhHHHHHHHHHHhhhcC
Q 038520 39 EAEAIIFSWVENAVMEDSRMAASLLRLHFHDCFGCDASVLLDD---TGDFVGEKTAPPNLNSLRGFEVIDAIKSDLESVC 115 (322)
Q Consensus 39 ~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcfGcDgSill~~---~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le~~c 115 (322)
..++||+++|++.++ +++++|+||||+|||||+||+|+++++ +..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~---- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY---- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc----
Confidence 457899999999999 999999999999999999999998854 333467999999985559999999999987
Q ss_pred CCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhccccc
Q 038520 116 PETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSGAHTM 195 (322)
Q Consensus 116 p~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTi 195 (322)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.++++|++.|+++||+++|||+|+|||||
T Consensus 86 ~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaHTi 164 (253)
T cd00691 86 P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAHTL 164 (253)
T ss_pred C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccccee
Confidence 3 899999999999999999999999999999999999877777889999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcCCC--------Cchhh
Q 038520 196 GKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSGEG--------LLPSD 267 (322)
Q Consensus 196 G~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g--------lL~SD 267 (322)
|++||.. +++. + ++ ..||.+|||+||++|+.++| +|+||
T Consensus 165 G~a~c~~-----~~~~-----------------------g----~~-~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD 211 (253)
T cd00691 165 GRCHKER-----SGYD-----------------------G----PW-TKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTD 211 (253)
T ss_pred ecccccC-----CCCC-----------------------C----CC-CCCCCcccHHHHHHHhcCCCccCcCcceechhh
Confidence 9999953 2221 0 01 25999999999999999999 99999
Q ss_pred hhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCC
Q 038520 268 QILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPA 307 (322)
Q Consensus 268 ~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 307 (322)
++|+.|++|+.+|++||.|+++|+++|++||+||++|+|.
T Consensus 212 ~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 212 KALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred HHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=5.2e-64 Score=465.53 Aligned_cols=229 Identities=30% Similarity=0.458 Sum_probs=204.9
Q ss_pred cchh--ccChhHHHHHHHHHHHHHHhCchhHHHHHHHHhc-----cCC----CCCCcccccCCCCCCCccCCCCCCCcch
Q 038520 31 NIYN--DSCPEAEAIIFSWVENAVMEDSRMAASLLRLHFH-----DCF----GCDASVLLDDTGDFVGEKTAPPNLNSLR 99 (322)
Q Consensus 31 ~fY~--~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FH-----Dcf----GcDgSill~~~~~~~~E~~~~~N~~~~r 99 (322)
+||. +-|+.+++.+++.+++.+ .|++++|.||||+|| ||+ ||||||.. .+|+++++|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 5665 348899999999999987 788999999999999 777 89999943 46999999986569
Q ss_pred hHHHHHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHH-
Q 038520 100 GFEVIDAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQN- 178 (322)
Q Consensus 100 g~~~I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 178 (322)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ ..+||.|..++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 489999999999999999999999999999999999864 46799999999999999997
Q ss_pred cCCChhhhhhhhccccccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHh
Q 038520 179 VGLTLQDMVALSGAHTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLL 258 (322)
Q Consensus 179 ~Gl~~~dlVaLsGaHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~ 258 (322)
+||+++|||+|+||||||++|| .|+ ++. + +++ .||.+|||+||++|+
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~-----------------------g----~~~-~tp~~fDn~Yy~~ll 195 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHK----DRS-GFE-----------------------G----AWT-SNPLIFDNSYFKELL 195 (250)
T ss_pred cCCCHHHheeeecceeeccccC----CCC-CCC-----------------------C----CCC-CCCCccchHHHHHHh
Confidence 6999999999999999999999 343 221 0 123 699999999999999
Q ss_pred cC--CCCch--hhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCC
Q 038520 259 SG--EGLLP--SDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPA 307 (322)
Q Consensus 259 ~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 307 (322)
.+ +|+|. |||+|+.|++|+.+|+.||.|++.|+++|++||+||++|++-
T Consensus 196 ~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 196 SGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred cCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 99 89865 999999999999999999999999999999999999999973
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.3e-62 Score=452.98 Aligned_cols=218 Identities=29% Similarity=0.427 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhCchhHHHHHHHHhccCC---------CCCCcccccCCCCCCCccCCCCCCCcchhHHHHHHHHHHhh
Q 038520 42 AIIFSWVENAVMEDSRMAASLLRLHFHDCF---------GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVIDAIKSDLE 112 (322)
Q Consensus 42 ~iV~~~v~~~~~~d~~~aa~llRL~FHDcf---------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le 112 (322)
+-++..+.+.+ .+...+|.+|||+||||. ||||||.+. .|+++++|.++..++++|++||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc-
Confidence 34566777766 457899999999999996 999999753 5999999996655999999999998
Q ss_pred hcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhcc
Q 038520 113 SVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSGA 192 (322)
Q Consensus 113 ~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 192 (322)
++|||||||+||||+||+.+|||.|+|++||+|+.++.+ +++||+|+.++++|++.|+++||+++||||||||
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGa 162 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGG 162 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecc
Confidence 489999999999999999999999999999999998753 5689999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcC--CCC--chhhh
Q 038520 193 HTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSG--EGL--LPSDQ 268 (322)
Q Consensus 193 HTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl--L~SD~ 268 (322)
||||++||. | +++. + .|| .||.+|||+||++|+.+ +|+ |+||+
T Consensus 163 HTiG~ah~~----r-~g~~-----------------------g----~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~ 209 (251)
T PLN02879 163 HTLGRCHKE----R-SGFE-----------------------G----AWT-PNPLIFDNSYFKEILSGEKEGLLQLPTDK 209 (251)
T ss_pred ccccccccc----c-ccCC-----------------------C----CCC-CCccceeHHHHHHHHcCCcCCCccchhhH
Confidence 999999995 3 2321 0 145 69999999999999999 898 68999
Q ss_pred hcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCC
Q 038520 269 ILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPA 307 (322)
Q Consensus 269 ~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 307 (322)
+|+.|++|+++|++||.||+.|+++|+.||+||++||+.
T Consensus 210 aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 210 ALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999999984
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=5.5e-62 Score=466.01 Aligned_cols=234 Identities=27% Similarity=0.413 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHhCc---hhHHHHHHHHhccCC--------------CCCCcccccCCCCCCCccCCCCCCCcchhHH
Q 038520 40 AEAIIFSWVENAVMEDS---RMAASLLRLHFHDCF--------------GCDASVLLDDTGDFVGEKTAPPNLNSLRGFE 102 (322)
Q Consensus 40 ~e~iV~~~v~~~~~~d~---~~aa~llRL~FHDcf--------------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~ 102 (322)
+|..|++++++.+..+. ..|+.+|||+||||+ ||||||||+.+ .|+++++|. +++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 47889999999998554 467889999999996 99999999743 699999997 555 8
Q ss_pred HHHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhh-cCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCC
Q 038520 103 VIDAIKSDLESVCPETVSCADILAVAARDSVVL-TAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGL 181 (322)
Q Consensus 103 ~I~~iK~~le~~cp~~VScADilalAardAV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 181 (322)
+|+.||..+|+.| |||||||+||||+||+. +|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 69999999999999999864 45899999999999999999999
Q ss_pred ChhhhhhhhccccccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHh-cC
Q 038520 182 TLQDMVALSGAHTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLL-SG 260 (322)
Q Consensus 182 ~~~dlVaLsGaHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~-~~ 260 (322)
+.+|||+|+||||||++|. +||+++ ..+|| .||.+|||+||+|++ .+
T Consensus 163 ~~~E~VaLsGAHTiG~a~~-------------~Dps~~------------------g~p~D-~TP~~FDn~Yf~~ll~~~ 210 (328)
T cd00692 163 SPDELVALLAAHSVAAQDF-------------VDPSIA------------------GTPFD-STPGVFDTQFFIETLLKG 210 (328)
T ss_pred CHHHHhhhcccccccccCC-------------CCCCCC------------------CCCCC-CCcchhcHHHHHHHHHcC
Confidence 9999999999999999981 367664 14588 599999999999987 55
Q ss_pred CC-------------------CchhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCCCCCCCCCcccccCccC
Q 038520 261 EG-------------------LLPSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLGPASGNDGQIRRNCRVV 321 (322)
Q Consensus 261 ~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 321 (322)
++ +|+||++|+.|++|+.+|++||.||++|+++|+.||+||++|||. ...+.+|+.|
T Consensus 211 ~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v 286 (328)
T cd00692 211 TAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDV 286 (328)
T ss_pred CCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCccc
Confidence 55 499999999999999999999999999999999999999999986 3478899987
Q ss_pred C
Q 038520 322 N 322 (322)
Q Consensus 322 n 322 (322)
+
T Consensus 287 ~ 287 (328)
T cd00692 287 I 287 (328)
T ss_pred C
Confidence 5
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=7.6e-59 Score=432.83 Aligned_cols=222 Identities=37% Similarity=0.536 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHhCchhHHHHHHHHhccCC----------CCCCcccccCCCCCCCccCCCCCCCcchhHHHHHHHHHHhh
Q 038520 43 IIFSWVENAVMEDSRMAASLLRLHFHDCF----------GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVIDAIKSDLE 112 (322)
Q Consensus 43 iV~~~v~~~~~~d~~~aa~llRL~FHDcf----------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le 112 (322)
.|++.|++.+.+++.+++++|||+||||| ||||||+++. |+++++|.++.+++++|++||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 57889999999999999999999999999 7999999973 9999999876799999999999999
Q ss_pred hcCCCCCCHHHHHHHhhhhhhhhc--CCCCcCCCCCCCCCCCcc--cccccCCCCCCCCCHHHHHHHHHHcCCChhhhhh
Q 038520 113 SVCPETVSCADILAVAARDSVVLT--AGPSWEVPMGRRDSFSAN--KAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVA 188 (322)
Q Consensus 113 ~~cp~~VScADilalAardAV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 188 (322)
. |++|||||||+||+++||+.+ |||.|+|++||+|++.+. ...+..++|.|..+++++++.|.++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 999999999999999999999 999999999999999774 3445667888889999999999999999999999
Q ss_pred hh-ccccc-cccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcCC-----
Q 038520 189 LS-GAHTM-GKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSGE----- 261 (322)
Q Consensus 189 Ls-GaHTi-G~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~----- 261 (322)
|+ ||||| |++||..+..|+ |+ +|+.||.+|||+||++|+.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~----------------------~~---------~~~~tp~~fDN~yy~~l~~~~~~~~~ 202 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG----------------------SG---------LWTSTPFTFDNAYFKNLLDMNWEWRV 202 (255)
T ss_pred hccCCeeccCcccCCCCCccc----------------------CC---------CCCCCCCccchHHHHHHhcCCccccc
Confidence 99 99999 999998887664 11 345799999999999999988
Q ss_pred -----------CCchhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhc
Q 038520 262 -----------GLLPSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGS 303 (322)
Q Consensus 262 -----------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 303 (322)
++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 203 ~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 203 GSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3.9e-56 Score=432.29 Aligned_cols=256 Identities=21% Similarity=0.330 Sum_probs=224.0
Q ss_pred HHHHHHHHHHHHhC--------chhHHHHHHHHhccCC---------CCC-CcccccCCCCCCCccCCCCCCCcchhHHH
Q 038520 42 AIIFSWVENAVMED--------SRMAASLLRLHFHDCF---------GCD-ASVLLDDTGDFVGEKTAPPNLNSLRGFEV 103 (322)
Q Consensus 42 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcf---------GcD-gSill~~~~~~~~E~~~~~N~~~~rg~~~ 103 (322)
+.|+++|++.+... ...+|.+|||+|||+. |++ |+|. +.+|++++.|.++.+++.+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iR------f~pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQR------FAPLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccc------cccccCcHhhhhHHHHHHH
Confidence 57889999988754 4789999999999998 664 5554 4579999999988899999
Q ss_pred HHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCccc----------------------------
Q 038520 104 IDAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANK---------------------------- 155 (322)
Q Consensus 104 I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---------------------------- 155 (322)
++.||+++. ..||+||+|+||+..|||.+|||.|+|.+||.|...+..
T Consensus 119 L~pik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 999999874 479999999999999999999999999999999975431
Q ss_pred ---------ccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhh-hccccccccccccccccccCCCCCCCCCCCHHHHHH
Q 038520 156 ---------AAATNGIPAPNSSLADLVAKFQNVGLTLQDMVAL-SGAHTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQS 225 (322)
Q Consensus 156 ---------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~ 225 (322)
.+.+..||+|..++.+|++.|++||||++||||| +||||||++||..|.+||. +||++++.|++.
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-----~dP~~~~~~~~g 269 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-----PEPEAAPIEQQG 269 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-----CCCCcCHHHHHh
Confidence 0112269999999999999999999999999999 5999999999999999984 599999999999
Q ss_pred Hh--hhCCCCCC--CccccCC---CCCCCccChHHHHHHhc------------------------------------CCC
Q 038520 226 LQ--QLCSGSDI--DALAQLD---LVTPATFDNQYYINLLS------------------------------------GEG 262 (322)
Q Consensus 226 L~--~~Cp~~~~--~~~~~lD---~~Tp~~FDN~Yy~~l~~------------------------------------~~g 262 (322)
|+ .+||.+.+ .....+| +.||.+|||+||++|+. +++
T Consensus 270 Lgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~g 349 (409)
T cd00649 270 LGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPM 349 (409)
T ss_pred hcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcc
Confidence 95 88997533 2344677 47999999999999998 568
Q ss_pred CchhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHh--hcCCCCCCCCC
Q 038520 263 LLPSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKM--GSLGPASGNDG 312 (322)
Q Consensus 263 lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 312 (322)
||+||++|+.|++|+++|++||.|++.||++|++||+|| +.+|+++--.|
T Consensus 350 mL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 350 MLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 999999999999999999999999999999999999999 68999886554
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.7e-53 Score=435.73 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHhC--------chhHHHHHHHHhccCC---------CC-CCcccccCCCCCCCccCCCCCCCcchhHHH
Q 038520 42 AIIFSWVENAVMED--------SRMAASLLRLHFHDCF---------GC-DASVLLDDTGDFVGEKTAPPNLNSLRGFEV 103 (322)
Q Consensus 42 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcf---------Gc-DgSill~~~~~~~~E~~~~~N~~~~rg~~~ 103 (322)
+.|++++++.+... ...+|.+|||+||++. || .|+|. +.+|++++.|.++.+++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iR------f~P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQR------FAPLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCcee------cccccCchhhhhHHHHHHH
Confidence 35889999998764 4789999999999998 54 34454 5579999999988889999
Q ss_pred HHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcc-----------------------------
Q 038520 104 IDAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSAN----------------------------- 154 (322)
Q Consensus 104 I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~----------------------------- 154 (322)
++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 999986 58899999999999999999999999999999999994321
Q ss_pred --------cccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhh-ccccccccccccccccccCCCCCCCCCCCHHHHHH
Q 038520 155 --------KAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALS-GAHTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQS 225 (322)
Q Consensus 155 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~ 225 (322)
++. ...+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|| ++||++++.|++.
T Consensus 205 ~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-----g~dP~~~~~~~~g 278 (716)
T TIGR00198 205 EMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-----GPDPEGAPIEEQG 278 (716)
T ss_pred hccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-----CCCCCcCHHHHHH
Confidence 112 22699999999999999999999999999995 99999999999999998 2699999999999
Q ss_pred HhhhCCCCCC----CccccCC---CCCCCccChHHHHHHhcC----------------------------------CCCc
Q 038520 226 LQQLCSGSDI----DALAQLD---LVTPATFDNQYYINLLSG----------------------------------EGLL 264 (322)
Q Consensus 226 L~~~Cp~~~~----~~~~~lD---~~Tp~~FDN~Yy~~l~~~----------------------------------~glL 264 (322)
|+.+||.+.+ .....+| +.||.+|||+||+||+.. .++|
T Consensus 279 Lg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL 358 (716)
T TIGR00198 279 LGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIML 358 (716)
T ss_pred hcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCcc
Confidence 9999985321 2245677 579999999999999975 6899
Q ss_pred hhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhh--cCCCCC
Q 038520 265 PSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMG--SLGPAS 308 (322)
Q Consensus 265 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~t 308 (322)
+||++|..|++++++|+.||.|++.|+++|++||+||+ .+|++.
T Consensus 359 ~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 359 DADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred chhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 99999999999999999999999999999999999999 566544
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.3e-49 Score=406.69 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHhC--------chhHHHHHHHHhccCC---------CCC-CcccccCCCCCCCccCCCCCCCcchhHHH
Q 038520 42 AIIFSWVENAVMED--------SRMAASLLRLHFHDCF---------GCD-ASVLLDDTGDFVGEKTAPPNLNSLRGFEV 103 (322)
Q Consensus 42 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcf---------GcD-gSill~~~~~~~~E~~~~~N~~~~rg~~~ 103 (322)
+.|+++|++.+... ...+|.+|||+||++. ||+ |+| ++.+|++++.|.++.+++.+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~i------Rf~pe~~w~~N~gL~ka~~~ 130 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQ------RFAPLNSWPDNVNLDKARRL 130 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcc------cCcccccchhhhhHHHHHHH
Confidence 46889999988754 4789999999999998 554 445 45579999999988899999
Q ss_pred HHHHHHHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCccc----------------------------
Q 038520 104 IDAIKSDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANK---------------------------- 155 (322)
Q Consensus 104 I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---------------------------- 155 (322)
+++||+++. ..||+||+|+||+..|||.+|||.|+|.+||.|...+..
T Consensus 131 L~pik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~ 206 (726)
T PRK15061 131 LWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLA 206 (726)
T ss_pred HHHHHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchh
Confidence 999999874 479999999999999999999999999999999865332
Q ss_pred -----------ccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhh-ccccccccccccccccccCCCCCCCCCCCHHHH
Q 038520 156 -----------AAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALS-GAHTMGKARCLTFSSRLQSSSNTNGPDNNPDFL 223 (322)
Q Consensus 156 -----------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~ 223 (322)
++ +..+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+||- +||.+++.|+
T Consensus 207 a~~mgliyvnpeg-p~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlg-----pdP~~a~~~~ 280 (726)
T PRK15061 207 AVQMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHVG-----PEPEAAPIEE 280 (726)
T ss_pred hhhccceecCCCC-CCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCcccccC-----CCCCcCHHHH
Confidence 11 22489999999999999999999999999995 999999999999999982 6999999999
Q ss_pred HHHh--hhCCCCCC--CccccCC---CCCCCccChHHHHHHhcC------------------------------------
Q 038520 224 QSLQ--QLCSGSDI--DALAQLD---LVTPATFDNQYYINLLSG------------------------------------ 260 (322)
Q Consensus 224 ~~L~--~~Cp~~~~--~~~~~lD---~~Tp~~FDN~Yy~~l~~~------------------------------------ 260 (322)
+.|. .+||.+.+ .....+| +.||.+|||+||++|+.+
T Consensus 281 qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~ 360 (726)
T PRK15061 281 QGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHA 360 (726)
T ss_pred HhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccC
Confidence 9985 88997432 2344577 579999999999999985
Q ss_pred CCCchhhhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhh--cCCCCCC
Q 038520 261 EGLLPSDQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMG--SLGPASG 309 (322)
Q Consensus 261 ~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg 309 (322)
.+||+||++|+.|++++++|++||.|+++|+++|++||+||+ .+|+++-
T Consensus 361 ~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~r 411 (726)
T PRK15061 361 PTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSR 411 (726)
T ss_pred cccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhh
Confidence 589999999999999999999999999999999999999994 4676553
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=8e-49 Score=363.56 Aligned_cols=213 Identities=28% Similarity=0.333 Sum_probs=175.6
Q ss_pred HHHHHHhCchhHHHHHHHHhccCC---------CCCCcccccCCCCCCCccC-CCCCCCcchhHHHHHHHHHHhhhcCCC
Q 038520 48 VENAVMEDSRMAASLLRLHFHDCF---------GCDASVLLDDTGDFVGEKT-APPNLNSLRGFEVIDAIKSDLESVCPE 117 (322)
Q Consensus 48 v~~~~~~d~~~aa~llRL~FHDcf---------GcDgSill~~~~~~~~E~~-~~~N~~~~rg~~~I~~iK~~le~~cp~ 117 (322)
-......+++++++||||+||||| ||||||+++. +.+|+. .+.| ..+++|++|+.+
T Consensus 31 ~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~---~~~En~G~~~n-~~l~~~~~i~~~---------- 96 (264)
T cd08201 31 TDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYEL---DRPENIGSGFN-TTLNFFVNFYSP---------- 96 (264)
T ss_pred cccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecC---CChhhccCchh-hccccceeeccC----------
Confidence 334455788999999999999999 9999999973 246777 3444 367888877543
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhc-ccccc
Q 038520 118 TVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANKAAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSG-AHTMG 196 (322)
Q Consensus 118 ~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG 196 (322)
+||||||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|++|||+++|||+|+| |||||
T Consensus 97 ~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG 172 (264)
T cd08201 97 RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLG 172 (264)
T ss_pred ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeee
Confidence 699999999999999999999999999999999988652 4999999999999999999999999999996 99999
Q ss_pred ccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHHHHHHhcCCC----------Cchh
Q 038520 197 KARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQYYINLLSGEG----------LLPS 266 (322)
Q Consensus 197 ~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g----------lL~S 266 (322)
++||..|.+++.. ++. .+...+|| .||.+|||+||.+++.+.. .+.|
T Consensus 173 ~ahc~~f~~~~~~------g~~----------------~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~s 229 (264)
T cd08201 173 GVHSEDFPEIVPP------GSV----------------PDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNS 229 (264)
T ss_pred ecccccchhhcCC------ccc----------------cCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccc
Confidence 9999988776421 000 01234677 6999999999999998642 3689
Q ss_pred hhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhc
Q 038520 267 DQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGS 303 (322)
Q Consensus 267 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 303 (322)
|..+++...- ..++..| +++.|.+.++..+.||.+
T Consensus 230 d~r~f~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 230 DLRIFSSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred hhhheecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 9999985543 3567777 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.3e-38 Score=298.91 Aligned_cols=219 Identities=20% Similarity=0.274 Sum_probs=176.6
Q ss_pred HHHHHHHHhCchhHHHHHHHHhccCC---------CCCCc-ccccCCCCCCCccCCCCCCC--cchhHHHHHHHHHHhhh
Q 038520 46 SWVENAVMEDSRMAASLLRLHFHDCF---------GCDAS-VLLDDTGDFVGEKTAPPNLN--SLRGFEVIDAIKSDLES 113 (322)
Q Consensus 46 ~~v~~~~~~d~~~aa~llRL~FHDcf---------GcDgS-ill~~~~~~~~E~~~~~N~~--~~rg~~~I~~iK~~le~ 113 (322)
+.+++.+.+.....+.||||+||++. |++|+ |.+ .+|++++.|.+ +.+.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 56777888888889999999999997 77777 544 57999999997 67899999999998852
Q ss_pred c-CCC-CCCHHHHHHHhhhhhhhhcCC-----CCcCCCCCCCCCCCcccccc--cCCCCCCC------------CCHHHH
Q 038520 114 V-CPE-TVSCADILAVAARDSVVLTAG-----PSWEVPMGRRDSFSANKAAA--TNGIPAPN------------SSLADL 172 (322)
Q Consensus 114 ~-cp~-~VScADilalAardAV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 172 (322)
. -++ .||+||+|+||+..|||.+|| |.|+|.+||.|...+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 2 122 699999999999999999999 99999999999987532110 11344332 234789
Q ss_pred HHHHHHcCCChhhhhhhhccc-cccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccCh
Q 038520 173 VAKFQNVGLTLQDMVALSGAH-TMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDN 251 (322)
Q Consensus 173 ~~~F~~~Gl~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN 251 (322)
++.|.++|||++|||||+||| ++|..|-.++ + -+|. .+|.+|||
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~----~------------------------------G~wT-~~p~~f~N 215 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H------------------------------GVFT-DRPGVLTN 215 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC----C------------------------------CCCc-CCCCcccc
Confidence 999999999999999999997 6886553211 1 0132 58999999
Q ss_pred HHHHHHhcC--------------------CC-----CchhhhhcccChhhHHHHHhhccC--hhhHHHHHHHHHHHhhcC
Q 038520 252 QYYINLLSG--------------------EG-----LLPSDQILVSQDQTREIINSYAED--TSVFFEDFKISMLKMGSL 304 (322)
Q Consensus 252 ~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~l 304 (322)
.||+||+.- .| .+.+|.+|.+|++.|++|+.||.| ++.||+||++||.||.++
T Consensus 216 ~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmel 295 (297)
T cd08200 216 DFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNL 295 (297)
T ss_pred HHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhc
Confidence 999999951 01 268899999999999999999998 999999999999999987
Q ss_pred C
Q 038520 305 G 305 (322)
Q Consensus 305 g 305 (322)
.
T Consensus 296 d 296 (297)
T cd08200 296 D 296 (297)
T ss_pred C
Confidence 4
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.4e-33 Score=288.67 Aligned_cols=219 Identities=21% Similarity=0.279 Sum_probs=174.1
Q ss_pred HHHHHHHHH---HHhCchhHHHHHHHHhccCC---------CCCCc-ccccCCCCCCCccCCCCC--CCcchhHHHHHHH
Q 038520 43 IIFSWVENA---VMEDSRMAASLLRLHFHDCF---------GCDAS-VLLDDTGDFVGEKTAPPN--LNSLRGFEVIDAI 107 (322)
Q Consensus 43 iV~~~v~~~---~~~d~~~aa~llRL~FHDcf---------GcDgS-ill~~~~~~~~E~~~~~N--~~~~rg~~~I~~i 107 (322)
+|+++|++. +....-..+.||||+||++. |++|+ |.+ .+|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl------~pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRL------EPQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeec------chhcCcccCCHHHHHHHHHHHHHH
Confidence 346666553 45666678999999999997 88887 655 469999999 6677899999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHhhhhhhhhc---CCC--CcCCCCCCCCCCCcccccccCCCC-----C----------CCC
Q 038520 108 KSDLESVCPETVSCADILAVAARDSVVLT---AGP--SWEVPMGRRDSFSANKAAATNGIP-----A----------PNS 167 (322)
Q Consensus 108 K~~le~~cp~~VScADilalAardAV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP-----~----------p~~ 167 (322)
|++... ..||+||+|+||+..|||.+ ||| .++|.+||.|...... ++....| + ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998863 27999999999999999999 898 5899999999987642 2222222 1 112
Q ss_pred CHHHHHHHHHHcCCChhhhhhhhcc-ccccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCC
Q 038520 168 SLADLVAKFQNVGLTLQDMVALSGA-HTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTP 246 (322)
Q Consensus 168 ~~~~l~~~F~~~Gl~~~dlVaLsGa-HTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp 246 (322)
....|++.|.++|||++|||||+|| |++|..|-.++ + -+|. .+|
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~----~------------------------------G~~T-~~p 623 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK----H------------------------------GVFT-DRV 623 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC----C------------------------------CCCc-CCC
Confidence 3466889999999999999999998 59998774221 1 0132 589
Q ss_pred CccChHHHHHHhcCC--------------------C---C--chhhhhcccChhhHHHHHhhccCh--hhHHHHHHHHHH
Q 038520 247 ATFDNQYYINLLSGE--------------------G---L--LPSDQILVSQDQTREIINSYAEDT--SVFFEDFKISML 299 (322)
Q Consensus 247 ~~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am~ 299 (322)
.+|||.||+||+.-. | + ..+|.+|.+|++.|++|+.||+|+ +.|++||++||.
T Consensus 624 ~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~ 703 (716)
T TIGR00198 624 GVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWT 703 (716)
T ss_pred CccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 999999999999621 2 2 278999999999999999999997 899999999999
Q ss_pred HhhcCCC
Q 038520 300 KMGSLGP 306 (322)
Q Consensus 300 Km~~lgv 306 (322)
|+.+++-
T Consensus 704 Klm~ldr 710 (716)
T TIGR00198 704 KVMNLDR 710 (716)
T ss_pred HHHhCCC
Confidence 9999874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.8e-33 Score=284.01 Aligned_cols=219 Identities=22% Similarity=0.307 Sum_probs=176.8
Q ss_pred HHHHHHHHhCchhHHHHHHHHhccCC---------CCCCc-ccccCCCCCCCccCCCCCC--CcchhHHHHHHHHHHhhh
Q 038520 46 SWVENAVMEDSRMAASLLRLHFHDCF---------GCDAS-VLLDDTGDFVGEKTAPPNL--NSLRGFEVIDAIKSDLES 113 (322)
Q Consensus 46 ~~v~~~~~~d~~~aa~llRL~FHDcf---------GcDgS-ill~~~~~~~~E~~~~~N~--~~~rg~~~I~~iK~~le~ 113 (322)
..+++.+....-..+.|||++||++. |++|+ |.|. +|++++.|+ ++.+.+++++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 46677777777789999999999997 88877 6654 699999998 677899999999999864
Q ss_pred cCC--CCCCHHHHHHHhhhhhhhhc---CC--CCcCCCCCCCCCCCccccccc---CCCCCCC------------CCHHH
Q 038520 114 VCP--ETVSCADILAVAARDSVVLT---AG--PSWEVPMGRRDSFSANKAAAT---NGIPAPN------------SSLAD 171 (322)
Q Consensus 114 ~cp--~~VScADilalAardAV~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 171 (322)
.-. ..||+||+|+||+..|||.+ || |.++|.+||.|...... +++ ..+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 321 26999999999999999998 68 99999999999987532 222 2456543 13478
Q ss_pred HHHHHHHcCCChhhhhhhhccc-cccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccC
Q 038520 172 LVAKFQNVGLTLQDMVALSGAH-TMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFD 250 (322)
Q Consensus 172 l~~~F~~~Gl~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FD 250 (322)
|++.|.++|||+.|||||+||| ++|..|-.++ + -+|. .+|.+||
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~----~------------------------------G~~T-~~p~~fs 639 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H------------------------------GVFT-DRPGVLT 639 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCC----C------------------------------CCCc-CCCCccc
Confidence 9999999999999999999997 6786652211 0 0122 5899999
Q ss_pred hHHHHHHhcC----------C----------C---C--chhhhhcccChhhHHHHHhhccC--hhhHHHHHHHHHHHhhc
Q 038520 251 NQYYINLLSG----------E----------G---L--LPSDQILVSQDQTREIINSYAED--TSVFFEDFKISMLKMGS 303 (322)
Q Consensus 251 N~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~ 303 (322)
|.||+||+.- . | + +.+|.+|.+|++.|++|+.||.| ++.|++||++||.|+.+
T Consensus 640 NdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvme 719 (726)
T PRK15061 640 NDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMN 719 (726)
T ss_pred cHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 9999999951 1 1 1 47899999999999999999998 99999999999999999
Q ss_pred CCC
Q 038520 304 LGP 306 (322)
Q Consensus 304 lgv 306 (322)
++-
T Consensus 720 ldr 722 (726)
T PRK15061 720 LDR 722 (726)
T ss_pred CCC
Confidence 873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=5.5e-31 Score=259.35 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHhC--------chhHHHHHHHHhccCC------CCCCcccccCCCCCCCccCCCCCCCcchhHHHHHHHH
Q 038520 43 IIFSWVENAVMED--------SRMAASLLRLHFHDCF------GCDASVLLDDTGDFVGEKTAPPNLNSLRGFEVIDAIK 108 (322)
Q Consensus 43 iV~~~v~~~~~~d--------~~~aa~llRL~FHDcf------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK 108 (322)
.|+..++..+... ...+|.+|||+||-+. |-.|+- .+..+|.++.++|.|.++.+++.++.+||
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~--~G~qRFaPlnSWPDN~nLDKarRLLWPIK 148 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAG--GGQQRFAPLNSWPDNANLDKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCC--CCceecccccCCCcccchHHHHHHhhhHh
Confidence 4555666666543 3478999999999997 444442 24566889999999999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHhhhhhhhhcCCCCcCCCCCCCCCCCccc---------------------------------
Q 038520 109 SDLESVCPETVSCADILAVAARDSVVLTAGPSWEVPMGRRDSFSANK--------------------------------- 155 (322)
Q Consensus 109 ~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~--------------------------------- 155 (322)
+++- ..||+||+|.|++..|++.+|++.+.+..||.|-..+..
T Consensus 149 kKYG----~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGL 224 (730)
T COG0376 149 KKYG----RKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGL 224 (730)
T ss_pred Hhhc----ccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeee
Confidence 9885 589999999999999999999999999999999877654
Q ss_pred -----ccccCCCCCCCCCHHHHHHHHHHcCCChhhhhhhhc-cccccccccccccccccCCCCCCCCCCCHHHHHHHhh-
Q 038520 156 -----AAATNGIPAPNSSLADLVAKFQNVGLTLQDMVALSG-AHTMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQ- 228 (322)
Q Consensus 156 -----~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~- 228 (322)
++ +...|+|..+..+++..|++|+++++|.|||++ |||+|++|-..-.+-+ +++|.--+--.+.|-.
T Consensus 225 IYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-----g~ePe~a~ie~qGlGW~ 298 (730)
T COG0376 225 IYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-----GPEPEAAPIEQQGLGWA 298 (730)
T ss_pred EEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-----CCCccccchhhhccccc
Confidence 23 346899999999999999999999999999986 9999999965422222 3566655555555533
Q ss_pred -hCCCCCC-C-----ccccCCCCCCCccChHHHHHHhcCC-----------------------------------CCchh
Q 038520 229 -LCSGSDI-D-----ALAQLDLVTPATFDNQYYINLLSGE-----------------------------------GLLPS 266 (322)
Q Consensus 229 -~Cp~~~~-~-----~~~~lD~~Tp~~FDN~Yy~~l~~~~-----------------------------------glL~S 266 (322)
+|..+.+ + --+.|. .||++|||+||.+|+... .||.+
T Consensus 299 ~~~g~G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mltt 377 (730)
T COG0376 299 NTYGSGKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTT 377 (730)
T ss_pred cccCCCcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeecc
Confidence 3443322 1 133454 699999999999999531 37999
Q ss_pred hhhcccChhhHHHHHhhccChhhHHHHHHHHHHHhhcCC
Q 038520 267 DQILVSQDQTREIINSYAEDTSVFFEDFKISMLKMGSLG 305 (322)
Q Consensus 267 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 305 (322)
|.+|.-||.++++.++|..|++.|.+.|++||.||.+-.
T Consensus 378 DlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 378 DLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred chhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999998654
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.26 E-value=4.4e-11 Score=119.44 Aligned_cols=215 Identities=21% Similarity=0.283 Sum_probs=150.6
Q ss_pred HHHHHHHHhCchhHHHHHHHHhccCC---------CCCCc-ccccCCCCCCCccCCCCCCC--cchhHHHHHHHHHHhhh
Q 038520 46 SWVENAVMEDSRMAASLLRLHFHDCF---------GCDAS-VLLDDTGDFVGEKTAPPNLN--SLRGFEVIDAIKSDLES 113 (322)
Q Consensus 46 ~~v~~~~~~d~~~aa~llRL~FHDcf---------GcDgS-ill~~~~~~~~E~~~~~N~~--~~rg~~~I~~iK~~le~ 113 (322)
..+++.+....-....|+-.+|-.+- |.+|. |.|. +.++++-|.. +.+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 35667777777778899999998775 55555 5554 5688888853 3367888888888877
Q ss_pred cCCCCCCHHHHHHHhhhhhhhhc---CCC--CcCCCCCCCCCCCccccc----ccCCCCCC---------CCC-HHHHHH
Q 038520 114 VCPETVSCADILAVAARDSVVLT---AGP--SWEVPMGRRDSFSANKAA----ATNGIPAP---------NSS-LADLVA 174 (322)
Q Consensus 114 ~cp~~VScADilalAardAV~~~---GGP--~~~v~~GR~D~~~s~~~~----~~~~lP~p---------~~~-~~~l~~ 174 (322)
..||.||+|+|++..+|+.+ .|- .+++.+||.|+....... +...+-+. ..+ -.-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999875 665 467789999987643210 00001111 112 334667
Q ss_pred HHHHcCCChhhhhhhhccc-cccccccccccccccCCCCCCCCCCCHHHHHHHhhhCCCCCCCccccCCCCCCCccChHH
Q 038520 175 KFQNVGLTLQDMVALSGAH-TMGKARCLTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSGSDIDALAQLDLVTPATFDNQY 253 (322)
Q Consensus 175 ~F~~~Gl~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~lD~~Tp~~FDN~Y 253 (322)
.-+-.+||.-||++|+||- -+|.-+-. ....+. +..|..+.|.|
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~n~g~---------------------------------s~~GVf--T~~pg~LtndF 646 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGANYGG---------------------------------SKHGVF--TDRPGVLTNDF 646 (730)
T ss_pred HHHHhccCCccceEEEcceEeeccCCCC---------------------------------Ccccee--ccCcccccchh
Confidence 7778999999999999974 33322100 011221 13688888889
Q ss_pred HHHHhcC----------CCC---------------chhhhhcccChhhHHHHHhhccC--hhhHHHHHHHHHHHhhcCC
Q 038520 254 YINLLSG----------EGL---------------LPSDQILVSQDQTREIINSYAED--TSVFFEDFKISMLKMGSLG 305 (322)
Q Consensus 254 y~~l~~~----------~gl---------------L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lg 305 (322)
|.||+.= +++ -..|..+-+++..|.+.+-||.| ++.|.+||+.||.|..++.
T Consensus 647 FvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 647 FVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 9888851 121 24677777889999999999974 7899999999999998775
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=74.22 E-value=16 Score=35.86 Aligned_cols=60 Identities=13% Similarity=0.181 Sum_probs=35.8
Q ss_pred cCCCCcCCCCCCCCCCCcccccccCCCCCC---CCCHHHHHHHHHHcCCC----------hhhhhhhhccccc
Q 038520 136 TAGPSWEVPMGRRDSFSANKAAATNGIPAP---NSSLADLVAKFQNVGLT----------LQDMVALSGAHTM 195 (322)
Q Consensus 136 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~----------~~dlVaLsGaHTi 195 (322)
+|-..+..+.||.+.+.-.+.......+.. -..+.++.+.|++.|+. .+|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 477889999999865432211111111111 23567777888888874 4666777777644
No 20
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=54.90 E-value=99 Score=30.22 Aligned_cols=129 Identities=14% Similarity=0.213 Sum_probs=65.9
Q ss_pred hhcCCCCcCCCCCCCCCCCcccccccCCC---CCCCCCHHHHHHHHHHcCCCh----------hhhhhhhcccccccccc
Q 038520 134 VLTAGPSWEVPMGRRDSFSANKAAATNGI---PAPNSSLADLVAKFQNVGLTL----------QDMVALSGAHTMGKARC 200 (322)
Q Consensus 134 ~~~GGP~~~v~~GR~D~~~s~~~~~~~~l---P~p~~~~~~l~~~F~~~Gl~~----------~dlVaLsGaHTiG~ahc 200 (322)
..+|-..+..+.||.|-+.-...+..... -++-..+.++.+.|++.|+.. +|+..|.|+|.+
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~~----- 240 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL----- 240 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCeE-----
Confidence 34588889999999876422111000001 112345677888888888754 455555555532
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHhhhCCC-CCC---CccccCCCCCCCccChHHHHHHhcCCCCchhhhhcccChhh
Q 038520 201 LTFSSRLQSSSNTNGPDNNPDFLQSLQQLCSG-SDI---DALAQLDLVTPATFDNQYYINLLSGEGLLPSDQILVSQDQT 276 (322)
Q Consensus 201 ~~f~~Rl~~~~~~~dp~~d~~~~~~L~~~Cp~-~~~---~~~~~lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t 276 (322)
++.|....+|...-.. ... ......+ ..|..+|...|+..++..++=. ...
T Consensus 241 ----------------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~-~~~~~~~e~~fr~~~~~d~ma~--------ekl 295 (317)
T TIGR00874 241 ----------------TISPALLDELKESTGPVERKLDPESAKKVD-KQPIILDESEFRFLHNEDAMAT--------EKL 295 (317)
T ss_pred ----------------eCCHHHHHHHHhCCCCcCccCCcccccccc-ccCCCCCHHHHHHHhCCCcchH--------HHH
Confidence 3556666666443211 000 0010111 2345678888875554433211 123
Q ss_pred HHHHHhhccChhhHHH
Q 038520 277 REIINSYAEDTSVFFE 292 (322)
Q Consensus 277 ~~~V~~yA~d~~~F~~ 292 (322)
..-++.|+.|+....+
T Consensus 296 ~~gir~F~~d~~~Le~ 311 (317)
T TIGR00874 296 AEGIRKFAADQEKLEK 311 (317)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4456677766655443
No 21
>PRK12346 transaldolase A; Provisional
Probab=54.49 E-value=70 Score=31.22 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=43.1
Q ss_pred CCCHHHHHHHhhhhhh--hhcCCCCcCCCCCCCCCCCcccccccCCCCC----CCCCHHHHHHHHHHcCCC---------
Q 038520 118 TVSCADILAVAARDSV--VLTAGPSWEVPMGRRDSFSANKAAATNGIPA----PNSSLADLVAKFQNVGLT--------- 182 (322)
Q Consensus 118 ~VScADilalAardAV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gl~--------- 182 (322)
.|+|-=.+.|....|+ ..+|-..+..+.||.|.+.-.... ...++. +-..+.++.+.|++.|+.
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfR 227 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFR 227 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcEEEecccC
Confidence 3444433344443333 345888899999999865322111 111211 123567778888888864
Q ss_pred -hhhhhhhhccccc
Q 038520 183 -LQDMVALSGAHTM 195 (322)
Q Consensus 183 -~~dlVaLsGaHTi 195 (322)
.+|+.+|.|+|.+
T Consensus 228 n~~qi~alaG~d~l 241 (316)
T PRK12346 228 RTEQILALAGCDRL 241 (316)
T ss_pred CHHHHHHHhCCCEE
Confidence 4566666666643
No 22
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=52.48 E-value=1.2e+02 Score=30.45 Aligned_cols=58 Identities=12% Similarity=0.275 Sum_probs=34.8
Q ss_pred cCCCCcCCCCCCCCCCCcccccccCCCCCCC----CCHHHHHHHHHHcCCCh----------hhhhhhhcccc
Q 038520 136 TAGPSWEVPMGRRDSFSANKAAATNGIPAPN----SSLADLVAKFQNVGLTL----------QDMVALSGAHT 194 (322)
Q Consensus 136 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gl~~----------~dlVaLsGaHT 194 (322)
+|-..+..+.||.|.+.-...+ ...+|... ..+.++.+.|+..|+.. +++..|.|+|.
T Consensus 174 AGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~Im~ASfRn~~~v~~laG~d~ 245 (391)
T PRK12309 174 AGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFRNIGEIIELAGCDL 245 (391)
T ss_pred cCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcEEEecccCCHHHHHHHHCCCe
Confidence 5778899999998774322111 11234332 24677788888888643 45555555553
No 23
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=47.51 E-value=65 Score=31.39 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=28.1
Q ss_pred cCCCCcCCCCCCCCCCCcccccccCCCCC----CCCCHHHHHHHHHHcCCCh
Q 038520 136 TAGPSWEVPMGRRDSFSANKAAATNGIPA----PNSSLADLVAKFQNVGLTL 183 (322)
Q Consensus 136 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gl~~ 183 (322)
+|-..+..+.||.|-+.-...+. ...+. +-..+.++.+.|++.|+..
T Consensus 168 AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~d~Gv~~v~~i~~~~~~~~~~T 218 (313)
T cd00957 168 AGVTLISPFVGRILDWYKKHSGD-KAYTAEEDPGVASVKKIYNYYKKFGYKT 218 (313)
T ss_pred cCCCEEEeecchHHHhhhhcccc-ccCCccCCcHHHHHHHHHHHHHHcCCCc
Confidence 47778899999987642211010 01111 2234677888888888864
No 24
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=46.90 E-value=17 Score=28.44 Aligned_cols=18 Identities=33% Similarity=0.479 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHhhcCCC
Q 038520 289 VFFEDFKISMLKMGSLGP 306 (322)
Q Consensus 289 ~F~~~Fa~Am~Km~~lgv 306 (322)
...+.|..||.||+.||-
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356799999999999875
No 25
>PRK05269 transaldolase B; Provisional
Probab=46.37 E-value=1.1e+02 Score=29.80 Aligned_cols=50 Identities=8% Similarity=-0.016 Sum_probs=29.7
Q ss_pred hcCCCCcCCCCCCCCCCCcccccccCCC---CCCCCCHHHHHHHHHHcCCChh
Q 038520 135 LTAGPSWEVPMGRRDSFSANKAAATNGI---PAPNSSLADLVAKFQNVGLTLQ 184 (322)
Q Consensus 135 ~~GGP~~~v~~GR~D~~~s~~~~~~~~l---P~p~~~~~~l~~~F~~~Gl~~~ 184 (322)
.+|-..+..+.||.|...-...+....- -++-..+.++.+.|++.|+..+
T Consensus 169 ~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~ 221 (318)
T PRK05269 169 EAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTV 221 (318)
T ss_pred HcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCce
Confidence 3577889999999986422110000001 1123457788889988888654
No 26
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=25.39 E-value=39 Score=28.96 Aligned_cols=33 Identities=27% Similarity=0.514 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHcCCChhhh-hhhhccccccccc
Q 038520 167 SSLADLVAKFQNVGLTLQDM-VALSGAHTMGKAR 199 (322)
Q Consensus 167 ~~~~~l~~~F~~~Gl~~~dl-VaLsGaHTiG~ah 199 (322)
+++.+.+-.|+++||++.++ |.|--+|-||+++
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 45666777899999999997 5566799999875
No 27
>PF04225 OapA: Opacity-associated protein A LysM-like domain; InterPro: IPR007340 This entry includes the Haemophilus influenzae opacity-associated protein. This protein is required for efficient nasopharyngeal mucosal colonization, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation [].; PDB: 2GU1_A.
Probab=23.01 E-value=66 Score=25.07 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCChhhhhhhhcccc
Q 038520 169 LADLVAKFQNVGLTLQDMVALSGAHT 194 (322)
Q Consensus 169 ~~~l~~~F~~~Gl~~~dlVaLsGaHT 194 (322)
-+.|-..|.+.||+.+||-.|+-+.-
T Consensus 10 GDtLs~iF~~~gls~~dl~~v~~~~~ 35 (85)
T PF04225_consen 10 GDTLSTIFRRAGLSASDLYAVLEADG 35 (85)
T ss_dssp T--HHHHHHHTT--HHHHHHHHHHGG
T ss_pred CCcHHHHHHHcCCCHHHHHHHHhccC
Confidence 36788999999999999999997653
No 28
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.98 E-value=1e+02 Score=23.56 Aligned_cols=28 Identities=7% Similarity=0.247 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCchhHHHHHHHHhccC
Q 038520 43 IIFSWVENAVMEDSRMAASLLRLHFHDC 70 (322)
Q Consensus 43 iV~~~v~~~~~~d~~~aa~llRL~FHDc 70 (322)
|.|+.+++.++++|.+-+..||+.+--.
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 7899999999999999999999988643
No 29
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=20.67 E-value=1.5e+02 Score=22.09 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=16.3
Q ss_pred CCCCCCHHHHHHHhhhhhhhhcC
Q 038520 115 CPETVSCADILAVAARDSVVLTA 137 (322)
Q Consensus 115 cp~~VScADilalAardAV~~~G 137 (322)
+...+|.|||..+..-.-+...+
T Consensus 51 ~G~~~t~ADi~~~~~~~~~~~~~ 73 (95)
T PF00043_consen 51 VGDKLTIADIALFPMLDWLERLG 73 (95)
T ss_dssp SBSS-CHHHHHHHHHHHHHHHHT
T ss_pred eccCCchhHHHHHHHHHHHHHhC
Confidence 45689999998888876665543
No 30
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=20.36 E-value=74 Score=29.86 Aligned_cols=76 Identities=8% Similarity=-0.014 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCHHHHHHHhhhhhh--hhcCCCCcCCCCCCCCCCCcccccccCCCCCCC--CC---HHH
Q 038520 99 RGFEVIDAIKSDLESVCPETVSCADILAVAARDSV--VLTAGPSWEVPMGRRDSFSANKAAATNGIPAPN--SS---LAD 171 (322)
Q Consensus 99 rg~~~I~~iK~~le~~cp~~VScADilalAardAV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~--~~---~~~ 171 (322)
.|++.|..+++. .|++-=.+.|....|+ ..+|...+.++.||.|...-......+ +++. .. +.+
T Consensus 127 ~Gl~A~~~L~~~-------GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~--~d~~~~~gi~~~~~ 197 (252)
T cd00439 127 EGIPAIKDLIAA-------GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIG--LDLRGKAGVAQVTL 197 (252)
T ss_pred HHHHHHHHHHHC-------CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccc--cccccCcHHHHHHH
Confidence 466666655432 2333332333333332 234777889999999876643222111 2221 33 346
Q ss_pred HHHHHHHcCCCh
Q 038520 172 LVAKFQNVGLTL 183 (322)
Q Consensus 172 l~~~F~~~Gl~~ 183 (322)
+.+.|...|...
T Consensus 198 ~~~~~~~~~~~t 209 (252)
T cd00439 198 AYKLYKQKFKKQ 209 (252)
T ss_pred HHHHHHHhCCCC
Confidence 666777777654
Done!